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Genes within 1Mb (chr6:137989229:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -784280 sc-eQTL 9.04e-01 -0.0095 0.0784 0.261 B L1
ENSG00000027697 IFNGR1 769780 sc-eQTL 8.27e-01 -0.0167 0.0763 0.261 B L1
ENSG00000051620 HEBP2 -414302 sc-eQTL 6.63e-01 0.0261 0.0598 0.261 B L1
ENSG00000112378 PERP -118190 sc-eQTL 5.01e-02 0.117 0.0592 0.261 B L1
ENSG00000118503 TNFAIP3 122015 sc-eQTL 4.65e-01 -0.0352 0.0481 0.261 B L1
ENSG00000135597 REPS1 -999032 sc-eQTL 5.91e-01 0.0362 0.0673 0.261 B L1
ENSG00000237499 WAKMAR2 120996 sc-eQTL 5.68e-01 -0.0433 0.0757 0.261 B L1
ENSG00000024862 CCDC28A -784280 sc-eQTL 8.39e-01 -0.018 0.0883 0.261 CD4T L1
ENSG00000027697 IFNGR1 769780 sc-eQTL 7.90e-01 -0.0138 0.0517 0.261 CD4T L1
ENSG00000051620 HEBP2 -414302 sc-eQTL 9.02e-01 -0.00733 0.0592 0.261 CD4T L1
ENSG00000112378 PERP -118190 sc-eQTL 8.29e-01 -0.0121 0.0558 0.261 CD4T L1
ENSG00000118503 TNFAIP3 122015 sc-eQTL 4.61e-01 -0.0386 0.0523 0.261 CD4T L1
ENSG00000135597 REPS1 -999032 sc-eQTL 4.99e-01 0.0391 0.0578 0.261 CD4T L1
ENSG00000237499 WAKMAR2 120996 sc-eQTL 6.99e-01 -0.0255 0.0659 0.261 CD4T L1
ENSG00000024862 CCDC28A -784280 sc-eQTL 6.16e-01 -0.0483 0.0963 0.261 CD8T L1
ENSG00000027697 IFNGR1 769780 sc-eQTL 2.19e-01 -0.0724 0.0587 0.261 CD8T L1
ENSG00000051620 HEBP2 -414302 sc-eQTL 5.45e-01 0.0382 0.063 0.261 CD8T L1
ENSG00000112378 PERP -118190 sc-eQTL 4.02e-01 -0.0538 0.0642 0.261 CD8T L1
ENSG00000118503 TNFAIP3 122015 sc-eQTL 2.32e-01 -0.0592 0.0494 0.261 CD8T L1
ENSG00000135597 REPS1 -999032 sc-eQTL 9.99e-01 5.41e-05 0.0649 0.261 CD8T L1
ENSG00000237499 WAKMAR2 120996 sc-eQTL 3.33e-01 -0.0706 0.0727 0.261 CD8T L1
ENSG00000024862 CCDC28A -784280 sc-eQTL 5.53e-01 0.0575 0.0967 0.259 DC L1
ENSG00000027697 IFNGR1 769780 sc-eQTL 5.35e-01 -0.0447 0.0718 0.259 DC L1
ENSG00000051620 HEBP2 -414302 sc-eQTL 5.81e-01 -0.0376 0.068 0.259 DC L1
ENSG00000118503 TNFAIP3 122015 sc-eQTL 2.45e-01 -0.0893 0.0765 0.259 DC L1
ENSG00000135540 NHSL1 -703342 sc-eQTL 6.59e-01 0.0392 0.0887 0.259 DC L1
ENSG00000135597 REPS1 -999032 sc-eQTL 5.98e-01 0.0415 0.0785 0.259 DC L1
ENSG00000225177 AL590617.2 -703319 sc-eQTL 3.12e-01 0.0938 0.0926 0.259 DC L1
ENSG00000237499 WAKMAR2 120996 sc-eQTL 3.04e-01 0.0804 0.078 0.259 DC L1
ENSG00000024862 CCDC28A -784280 sc-eQTL 7.85e-02 -0.123 0.0696 0.261 Mono L1
ENSG00000027697 IFNGR1 769780 sc-eQTL 2.99e-01 -0.0621 0.0597 0.261 Mono L1
ENSG00000051620 HEBP2 -414302 sc-eQTL 9.14e-01 0.00525 0.0485 0.261 Mono L1
ENSG00000118503 TNFAIP3 122015 sc-eQTL 1.54e-01 -0.0722 0.0505 0.261 Mono L1
ENSG00000135540 NHSL1 -703342 sc-eQTL 4.17e-01 -0.0744 0.0915 0.261 Mono L1
ENSG00000135597 REPS1 -999032 sc-eQTL 8.03e-01 0.0134 0.0537 0.261 Mono L1
ENSG00000225177 AL590617.2 -703319 sc-eQTL 2.31e-01 0.114 0.095 0.261 Mono L1
ENSG00000237499 WAKMAR2 120996 sc-eQTL 2.40e-01 -0.0739 0.0627 0.261 Mono L1
ENSG00000024862 CCDC28A -784280 sc-eQTL 8.86e-01 -0.0124 0.0862 0.26 NK L1
ENSG00000027697 IFNGR1 769780 sc-eQTL 7.04e-01 -0.0252 0.0662 0.26 NK L1
ENSG00000051620 HEBP2 -414302 sc-eQTL 3.33e-01 0.0735 0.0757 0.26 NK L1
ENSG00000112378 PERP -118190 sc-eQTL 7.06e-01 0.0243 0.0644 0.26 NK L1
ENSG00000118503 TNFAIP3 122015 sc-eQTL 4.45e-01 -0.0422 0.0551 0.26 NK L1
ENSG00000135597 REPS1 -999032 sc-eQTL 5.66e-02 0.135 0.0703 0.26 NK L1
ENSG00000237499 WAKMAR2 120996 sc-eQTL 1.01e-01 -0.128 0.0777 0.26 NK L1
ENSG00000024862 CCDC28A -784280 sc-eQTL 5.47e-01 0.0622 0.103 0.261 Other_T L1
ENSG00000027697 IFNGR1 769780 sc-eQTL 8.35e-01 0.0131 0.0629 0.261 Other_T L1
ENSG00000051620 HEBP2 -414302 sc-eQTL 9.20e-01 0.00673 0.0667 0.261 Other_T L1
ENSG00000112378 PERP -118190 sc-eQTL 4.57e-02 -0.164 0.0815 0.261 Other_T L1
ENSG00000118503 TNFAIP3 122015 sc-eQTL 1.13e-01 -0.0619 0.0389 0.261 Other_T L1
ENSG00000135597 REPS1 -999032 sc-eQTL 5.11e-01 -0.0528 0.0803 0.261 Other_T L1
ENSG00000237499 WAKMAR2 120996 sc-eQTL 3.83e-02 -0.16 0.0769 0.261 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -784280 sc-eQTL 5.60e-01 0.0671 0.115 0.26 B_Activated L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 6.02e-01 0.0537 0.103 0.26 B_Activated L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 7.70e-01 -0.0295 0.101 0.26 B_Activated L2
ENSG00000112378 PERP -118190 sc-eQTL 6.79e-01 -0.0217 0.0523 0.26 B_Activated L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 7.98e-01 0.026 0.102 0.26 B_Activated L2
ENSG00000135597 REPS1 -999032 sc-eQTL 7.69e-01 -0.0337 0.115 0.26 B_Activated L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 8.06e-01 -0.0218 0.0887 0.26 B_Activated L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 1.63e-01 -0.136 0.0972 0.262 B_Intermediate L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 1.00e-01 -0.148 0.0897 0.262 B_Intermediate L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 9.66e-01 0.0029 0.0677 0.262 B_Intermediate L2
ENSG00000112378 PERP -118190 sc-eQTL 1.82e-01 0.115 0.0858 0.262 B_Intermediate L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 5.93e-01 -0.0362 0.0675 0.262 B_Intermediate L2
ENSG00000135597 REPS1 -999032 sc-eQTL 7.35e-01 -0.0309 0.0913 0.262 B_Intermediate L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 1.73e-01 0.13 0.0954 0.262 B_Intermediate L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 9.57e-01 0.00536 0.1 0.259 B_Memory L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 3.91e-01 -0.085 0.0989 0.259 B_Memory L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 4.03e-01 0.0631 0.0754 0.259 B_Memory L2
ENSG00000112378 PERP -118190 sc-eQTL 2.64e-02 0.208 0.093 0.259 B_Memory L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 4.79e-01 -0.0459 0.0647 0.259 B_Memory L2
ENSG00000135597 REPS1 -999032 sc-eQTL 2.87e-01 0.1 0.0938 0.259 B_Memory L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 3.64e-01 0.0876 0.0962 0.259 B_Memory L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 6.65e-01 0.0407 0.0938 0.261 B_Naive1 L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 7.54e-01 -0.0243 0.0775 0.261 B_Naive1 L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 5.87e-01 0.0359 0.0659 0.261 B_Naive1 L2
ENSG00000112378 PERP -118190 sc-eQTL 7.55e-02 0.159 0.0887 0.261 B_Naive1 L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 8.14e-01 -0.0122 0.0519 0.261 B_Naive1 L2
ENSG00000135597 REPS1 -999032 sc-eQTL 7.83e-01 0.0209 0.0757 0.261 B_Naive1 L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 6.66e-01 0.0351 0.0812 0.261 B_Naive1 L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 3.23e-01 -0.0912 0.092 0.26 B_Naive2 L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 8.03e-01 -0.0237 0.0951 0.26 B_Naive2 L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 3.91e-01 0.0542 0.063 0.26 B_Naive2 L2
ENSG00000112378 PERP -118190 sc-eQTL 8.48e-01 -0.0145 0.0758 0.26 B_Naive2 L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 7.29e-01 0.0263 0.0757 0.26 B_Naive2 L2
ENSG00000135597 REPS1 -999032 sc-eQTL 7.75e-01 -0.0237 0.0828 0.26 B_Naive2 L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 1.13e-02 -0.246 0.0964 0.26 B_Naive2 L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 5.50e-01 0.0575 0.096 0.252 CD4_CTL L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 4.08e-01 0.0745 0.0898 0.252 CD4_CTL L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 9.43e-01 0.00598 0.083 0.252 CD4_CTL L2
ENSG00000112378 PERP -118190 sc-eQTL 5.10e-01 -0.0666 0.101 0.252 CD4_CTL L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 2.97e-01 0.0614 0.0588 0.252 CD4_CTL L2
ENSG00000135597 REPS1 -999032 sc-eQTL 7.65e-02 0.166 0.0934 0.252 CD4_CTL L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 1.82e-01 0.122 0.0914 0.252 CD4_CTL L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 3.77e-01 0.0829 0.0937 0.261 CD4_Naive L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 8.89e-01 -0.00693 0.0496 0.261 CD4_Naive L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 7.67e-01 -0.0174 0.0585 0.261 CD4_Naive L2
ENSG00000112378 PERP -118190 sc-eQTL 6.00e-01 -0.0406 0.0772 0.261 CD4_Naive L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 6.41e-01 -0.0253 0.0542 0.261 CD4_Naive L2
ENSG00000135597 REPS1 -999032 sc-eQTL 6.71e-01 0.0275 0.0647 0.261 CD4_Naive L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 7.85e-01 -0.0192 0.0702 0.261 CD4_Naive L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 1.02e-01 -0.147 0.0896 0.261 CD4_TCM L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 5.22e-01 -0.0435 0.0677 0.261 CD4_TCM L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 8.12e-01 0.016 0.0671 0.261 CD4_TCM L2
ENSG00000112378 PERP -118190 sc-eQTL 8.43e-01 -0.0167 0.0841 0.261 CD4_TCM L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 3.77e-01 -0.0432 0.0488 0.261 CD4_TCM L2
ENSG00000135597 REPS1 -999032 sc-eQTL 4.10e-01 0.0563 0.0682 0.261 CD4_TCM L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 2.72e-01 -0.0751 0.0683 0.261 CD4_TCM L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 4.53e-01 -0.078 0.104 0.261 CD4_TEM L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 8.59e-01 -0.014 0.0786 0.261 CD4_TEM L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 9.17e-01 -0.00742 0.0708 0.261 CD4_TEM L2
ENSG00000112378 PERP -118190 sc-eQTL 7.05e-01 0.0312 0.0823 0.261 CD4_TEM L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 7.77e-01 0.0148 0.0522 0.261 CD4_TEM L2
ENSG00000135597 REPS1 -999032 sc-eQTL 4.95e-01 -0.06 0.0879 0.261 CD4_TEM L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 6.51e-01 -0.0379 0.0837 0.261 CD4_TEM L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 1.51e-01 -0.15 0.104 0.261 CD8_CTL L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 3.67e-01 -0.0635 0.0702 0.261 CD8_CTL L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 4.05e-01 0.0622 0.0745 0.261 CD8_CTL L2
ENSG00000112378 PERP -118190 sc-eQTL 4.28e-01 0.0738 0.093 0.261 CD8_CTL L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 9.90e-01 -0.00074 0.0592 0.261 CD8_CTL L2
ENSG00000135597 REPS1 -999032 sc-eQTL 4.34e-01 -0.0637 0.0813 0.261 CD8_CTL L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 3.49e-01 -0.078 0.0831 0.261 CD8_CTL L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 6.35e-01 0.0472 0.0992 0.261 CD8_Naive L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 9.59e-01 -0.00358 0.0693 0.261 CD8_Naive L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 8.21e-01 -0.0143 0.0635 0.261 CD8_Naive L2
ENSG00000112378 PERP -118190 sc-eQTL 2.74e-01 -0.0834 0.0761 0.261 CD8_Naive L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 4.42e-01 -0.0416 0.0541 0.261 CD8_Naive L2
ENSG00000135597 REPS1 -999032 sc-eQTL 6.78e-01 0.0319 0.0768 0.261 CD8_Naive L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 2.22e-02 -0.182 0.0791 0.261 CD8_Naive L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 7.51e-01 -0.0358 0.113 0.25 CD8_TCM L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 4.83e-01 -0.0654 0.093 0.25 CD8_TCM L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 8.84e-02 0.135 0.0786 0.25 CD8_TCM L2
ENSG00000112378 PERP -118190 sc-eQTL 3.45e-01 -0.0989 0.104 0.25 CD8_TCM L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 6.93e-01 -0.0199 0.0504 0.25 CD8_TCM L2
ENSG00000135597 REPS1 -999032 sc-eQTL 6.83e-01 0.0351 0.0857 0.25 CD8_TCM L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 1.17e-01 0.145 0.0917 0.25 CD8_TCM L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 6.80e-01 0.0428 0.104 0.26 CD8_TEM L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 8.20e-02 -0.156 0.0892 0.26 CD8_TEM L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 8.78e-01 -0.0145 0.0943 0.26 CD8_TEM L2
ENSG00000112378 PERP -118190 sc-eQTL 1.09e-01 0.172 0.107 0.26 CD8_TEM L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 2.15e-01 -0.0821 0.066 0.26 CD8_TEM L2
ENSG00000135597 REPS1 -999032 sc-eQTL 6.82e-01 -0.0414 0.101 0.26 CD8_TEM L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 4.01e-01 0.0827 0.0982 0.26 CD8_TEM L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 3.58e-02 0.231 0.109 0.26 MAIT L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 8.99e-01 0.00906 0.0716 0.26 MAIT L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 7.81e-01 0.0213 0.0765 0.26 MAIT L2
ENSG00000112378 PERP -118190 sc-eQTL 6.66e-02 -0.185 0.1 0.26 MAIT L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 1.40e-01 -0.0709 0.0479 0.26 MAIT L2
ENSG00000135597 REPS1 -999032 sc-eQTL 9.66e-01 -0.0039 0.0903 0.26 MAIT L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 3.54e-01 -0.0826 0.0889 0.26 MAIT L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 4.83e-01 0.07 0.0996 0.262 NK_CD56bright L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 7.01e-01 0.0299 0.0778 0.262 NK_CD56bright L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 6.18e-01 0.0424 0.0848 0.262 NK_CD56bright L2
ENSG00000112378 PERP -118190 sc-eQTL 9.65e-01 0.004 0.0908 0.262 NK_CD56bright L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 1.37e-01 -0.086 0.0576 0.262 NK_CD56bright L2
ENSG00000135597 REPS1 -999032 sc-eQTL 7.10e-01 -0.0313 0.0843 0.262 NK_CD56bright L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 2.37e-01 -0.109 0.092 0.262 NK_CD56bright L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 9.09e-01 0.0107 0.094 0.256 NK_CD56dim L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 8.39e-01 -0.0126 0.0617 0.256 NK_CD56dim L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 2.39e-01 0.0982 0.0832 0.256 NK_CD56dim L2
ENSG00000112378 PERP -118190 sc-eQTL 5.45e-01 -0.0453 0.0747 0.256 NK_CD56dim L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 2.97e-01 -0.0607 0.058 0.256 NK_CD56dim L2
ENSG00000135597 REPS1 -999032 sc-eQTL 3.26e-01 0.0753 0.0765 0.256 NK_CD56dim L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 1.97e-01 -0.112 0.0868 0.256 NK_CD56dim L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 7.08e-01 0.0402 0.107 0.265 NK_HLA L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 9.38e-01 -0.00619 0.079 0.265 NK_HLA L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 9.91e-01 -0.00102 0.0916 0.265 NK_HLA L2
ENSG00000112378 PERP -118190 sc-eQTL 5.33e-01 0.0508 0.0813 0.265 NK_HLA L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 1.24e-01 -0.0962 0.0622 0.265 NK_HLA L2
ENSG00000135597 REPS1 -999032 sc-eQTL 3.45e-01 0.0937 0.099 0.265 NK_HLA L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 4.74e-01 -0.0722 0.101 0.265 NK_HLA L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 4.85e-01 -0.0671 0.096 0.256 NK_cytokine L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 7.85e-01 -0.0177 0.0648 0.256 NK_cytokine L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 7.88e-02 0.145 0.0822 0.256 NK_cytokine L2
ENSG00000112378 PERP -118190 sc-eQTL 2.67e-01 0.0856 0.0769 0.256 NK_cytokine L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 9.81e-01 0.00141 0.0578 0.256 NK_cytokine L2
ENSG00000135597 REPS1 -999032 sc-eQTL 1.80e-01 0.115 0.0851 0.256 NK_cytokine L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 2.74e-01 -0.0953 0.0869 0.256 NK_cytokine L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 7.23e-01 -0.0457 0.128 0.244 PB L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 2.58e-02 0.3 0.133 0.244 PB L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 2.88e-01 -0.121 0.114 0.244 PB L2
ENSG00000112378 PERP -118190 sc-eQTL 7.32e-01 0.0299 0.087 0.244 PB L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 1.01e-02 -0.268 0.102 0.244 PB L2
ENSG00000135597 REPS1 -999032 sc-eQTL 1.23e-02 0.308 0.121 0.244 PB L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 6.61e-01 -0.0557 0.127 0.244 PB L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 3.48e-01 -0.0976 0.104 0.263 Pro_T L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 9.59e-01 0.00406 0.0793 0.263 Pro_T L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 5.50e-01 -0.0496 0.0828 0.263 Pro_T L2
ENSG00000112378 PERP -118190 sc-eQTL 9.45e-01 0.0053 0.0766 0.263 Pro_T L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 1.11e-02 -0.122 0.0476 0.263 Pro_T L2
ENSG00000135597 REPS1 -999032 sc-eQTL 9.77e-01 0.00278 0.0965 0.263 Pro_T L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 3.55e-01 -0.0869 0.0936 0.263 Pro_T L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 5.45e-01 -0.0594 0.0979 0.261 Treg L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 8.02e-01 -0.0232 0.0922 0.261 Treg L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 6.68e-01 -0.0287 0.0669 0.261 Treg L2
ENSG00000112378 PERP -118190 sc-eQTL 4.44e-01 0.0807 0.105 0.261 Treg L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 5.05e-01 -0.0391 0.0586 0.261 Treg L2
ENSG00000135597 REPS1 -999032 sc-eQTL 5.80e-01 -0.0466 0.0842 0.261 Treg L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 9.08e-01 -0.0103 0.0894 0.261 Treg L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 8.10e-02 0.167 0.0951 0.261 cDC L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 2.86e-01 -0.0833 0.0778 0.261 cDC L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 2.99e-01 -0.0714 0.0685 0.261 cDC L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 8.30e-01 0.0166 0.077 0.261 cDC L2
ENSG00000135540 NHSL1 -703342 sc-eQTL 4.98e-01 -0.0605 0.0891 0.261 cDC L2
ENSG00000135597 REPS1 -999032 sc-eQTL 3.73e-01 0.0916 0.103 0.261 cDC L2
ENSG00000225177 AL590617.2 -703319 sc-eQTL 7.16e-01 0.0358 0.0984 0.261 cDC L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 2.82e-01 0.108 0.0999 0.261 cDC L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 2.60e-01 -0.0864 0.0765 0.261 cMono_IL1B L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 3.02e-01 -0.0577 0.0558 0.261 cMono_IL1B L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 6.10e-01 0.0282 0.0551 0.261 cMono_IL1B L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 1.65e-01 -0.0836 0.06 0.261 cMono_IL1B L2
ENSG00000135540 NHSL1 -703342 sc-eQTL 7.58e-01 -0.0285 0.0924 0.261 cMono_IL1B L2
ENSG00000135597 REPS1 -999032 sc-eQTL 1.31e-01 0.124 0.082 0.261 cMono_IL1B L2
ENSG00000225177 AL590617.2 -703319 sc-eQTL 2.56e-01 0.11 0.0964 0.261 cMono_IL1B L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 2.88e-01 -0.0683 0.0642 0.261 cMono_IL1B L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 8.56e-01 -0.0162 0.0889 0.261 cMono_S100A L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 6.66e-01 0.0282 0.0653 0.261 cMono_S100A L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 8.48e-01 -0.0116 0.0608 0.261 cMono_S100A L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 5.62e-01 -0.0337 0.058 0.261 cMono_S100A L2
ENSG00000135540 NHSL1 -703342 sc-eQTL 5.48e-01 -0.0573 0.0951 0.261 cMono_S100A L2
ENSG00000135597 REPS1 -999032 sc-eQTL 9.31e-01 -0.00786 0.0901 0.261 cMono_S100A L2
ENSG00000225177 AL590617.2 -703319 sc-eQTL 4.22e-01 0.0838 0.104 0.261 cMono_S100A L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 1.19e-01 -0.13 0.0829 0.261 cMono_S100A L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 2.24e-01 -0.143 0.117 0.261 gdT L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 8.02e-01 -0.0238 0.0944 0.261 gdT L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 6.84e-01 -0.0458 0.112 0.261 gdT L2
ENSG00000112378 PERP -118190 sc-eQTL 3.69e-01 -0.094 0.104 0.261 gdT L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 6.75e-01 -0.0244 0.0581 0.261 gdT L2
ENSG00000135597 REPS1 -999032 sc-eQTL 9.23e-01 -0.0112 0.116 0.261 gdT L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 1.78e-01 -0.142 0.105 0.261 gdT L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 5.61e-02 -0.195 0.102 0.251 intMono L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 3.61e-01 0.063 0.0689 0.251 intMono L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 6.83e-01 0.0281 0.0688 0.251 intMono L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 7.70e-01 -0.0174 0.0596 0.251 intMono L2
ENSG00000135540 NHSL1 -703342 sc-eQTL 9.79e-01 -0.00243 0.0928 0.251 intMono L2
ENSG00000135597 REPS1 -999032 sc-eQTL 2.41e-01 -0.112 0.0956 0.251 intMono L2
ENSG00000225177 AL590617.2 -703319 sc-eQTL 7.24e-01 0.0369 0.104 0.251 intMono L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 6.57e-01 -0.0395 0.0888 0.251 intMono L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 2.40e-01 -0.11 0.0936 0.262 ncMono L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 4.09e-01 -0.0661 0.0799 0.262 ncMono L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 1.02e-01 0.0916 0.0557 0.262 ncMono L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 4.59e-01 0.0524 0.0707 0.262 ncMono L2
ENSG00000135540 NHSL1 -703342 sc-eQTL 2.61e-01 -0.101 0.09 0.262 ncMono L2
ENSG00000135597 REPS1 -999032 sc-eQTL 4.10e-01 -0.0561 0.0679 0.262 ncMono L2
ENSG00000225177 AL590617.2 -703319 sc-eQTL 9.82e-01 0.00226 0.1 0.262 ncMono L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 1.40e-01 0.13 0.088 0.262 ncMono L2
ENSG00000024862 CCDC28A -784280 sc-eQTL 5.74e-01 0.0611 0.109 0.254 pDC L2
ENSG00000027697 IFNGR1 769780 sc-eQTL 9.63e-01 0.00425 0.0922 0.254 pDC L2
ENSG00000051620 HEBP2 -414302 sc-eQTL 9.66e-01 -0.00358 0.0845 0.254 pDC L2
ENSG00000118503 TNFAIP3 122015 sc-eQTL 4.06e-01 -0.0711 0.0853 0.254 pDC L2
ENSG00000135540 NHSL1 -703342 sc-eQTL 6.42e-01 0.0392 0.0841 0.254 pDC L2
ENSG00000135597 REPS1 -999032 sc-eQTL 4.73e-01 0.0612 0.0851 0.254 pDC L2
ENSG00000225177 AL590617.2 -703319 sc-eQTL 1.37e-01 0.125 0.0839 0.254 pDC L2
ENSG00000237499 WAKMAR2 120996 sc-eQTL 3.83e-01 0.0757 0.0866 0.254 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -784280 sc-eQTL 5.66e-01 -0.0534 0.0929 0.261 B_Memory LOneK1K
ENSG00000027697 IFNGR1 769780 sc-eQTL 7.42e-01 -0.0262 0.0793 0.261 B_Memory LOneK1K
ENSG00000051620 HEBP2 -414302 sc-eQTL 7.35e-01 0.0218 0.0644 0.261 B_Memory LOneK1K
ENSG00000112378 PERP -118190 sc-eQTL 5.80e-02 0.16 0.0841 0.261 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 122015 sc-eQTL 3.30e-01 -0.0546 0.0559 0.261 B_Memory LOneK1K
ENSG00000135597 REPS1 -999032 sc-eQTL 5.10e-01 0.0566 0.0857 0.261 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 120996 sc-eQTL 4.52e-02 0.189 0.0938 0.261 B_Memory LOneK1K
ENSG00000024862 CCDC28A -784280 sc-eQTL 8.89e-01 -0.0122 0.0873 0.261 B_Naive LOneK1K
ENSG00000027697 IFNGR1 769780 sc-eQTL 8.67e-01 -0.0137 0.0816 0.261 B_Naive LOneK1K
ENSG00000051620 HEBP2 -414302 sc-eQTL 5.06e-01 0.0402 0.0605 0.261 B_Naive LOneK1K
ENSG00000112378 PERP -118190 sc-eQTL 8.06e-02 0.155 0.0883 0.261 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 122015 sc-eQTL 9.77e-01 -0.00137 0.0467 0.261 B_Naive LOneK1K
ENSG00000135597 REPS1 -999032 sc-eQTL 8.40e-01 -0.0141 0.0696 0.261 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 120996 sc-eQTL 2.52e-01 -0.0952 0.0829 0.261 B_Naive LOneK1K
ENSG00000024862 CCDC28A -784280 sc-eQTL 3.28e-01 -0.0696 0.0709 0.261 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 769780 sc-eQTL 3.46e-01 -0.0534 0.0565 0.261 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -414302 sc-eQTL 6.72e-01 0.0225 0.053 0.261 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 122015 sc-eQTL 5.42e-02 -0.1 0.0519 0.261 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -703342 sc-eQTL 4.17e-01 -0.0756 0.0931 0.261 CD14_Mono LOneK1K
ENSG00000135597 REPS1 -999032 sc-eQTL 2.93e-01 0.0806 0.0765 0.261 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -703319 sc-eQTL 1.96e-01 0.129 0.0997 0.261 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 120996 sc-eQTL 1.36e-01 -0.0933 0.0624 0.261 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -784280 sc-eQTL 2.49e-02 -0.212 0.0939 0.259 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 769780 sc-eQTL 7.12e-01 -0.0246 0.0665 0.259 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -414302 sc-eQTL 2.10e-01 0.0635 0.0505 0.259 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 122015 sc-eQTL 4.03e-01 0.0519 0.062 0.259 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -703342 sc-eQTL 7.81e-01 0.0251 0.0902 0.259 CD16_Mono LOneK1K
ENSG00000135597 REPS1 -999032 sc-eQTL 1.13e-01 -0.0889 0.0558 0.259 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -703319 sc-eQTL 7.88e-01 0.0268 0.0997 0.259 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 120996 sc-eQTL 5.44e-01 0.0505 0.0832 0.259 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -784280 sc-eQTL 9.60e-01 -0.00454 0.0898 0.256 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 769780 sc-eQTL 7.41e-01 -0.0208 0.0627 0.256 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -414302 sc-eQTL 1.90e-01 0.102 0.0775 0.256 NK_CD56dim LOneK1K
ENSG00000112378 PERP -118190 sc-eQTL 5.71e-01 0.0372 0.0656 0.256 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 122015 sc-eQTL 4.63e-01 -0.042 0.0571 0.256 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 -999032 sc-eQTL 6.76e-02 0.136 0.0742 0.256 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 120996 sc-eQTL 1.70e-01 -0.11 0.0797 0.256 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112378 \N -118190 4.26e-06 4.7e-06 8.15e-07 2.52e-06 1.64e-06 1.39e-06 3.96e-06 9.79e-07 4.8e-06 2.35e-06 4.84e-06 3.56e-06 7.43e-06 2.25e-06 1.35e-06 3.34e-06 2.07e-06 3.36e-06 1.41e-06 1.15e-06 2.93e-06 4.47e-06 3.84e-06 1.34e-06 5.3e-06 1.81e-06 2.6e-06 1.75e-06 4.48e-06 4.29e-06 2.32e-06 5.58e-07 5.4e-07 1.59e-06 2.16e-06 1.14e-06 9.54e-07 4.59e-07 9.23e-07 4.55e-07 7.52e-07 5.33e-06 4.01e-07 1.57e-07 5.77e-07 7.44e-07 1.01e-06 5.67e-07 4.54e-07