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Genes within 1Mb (chr6:137825368:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -948141 sc-eQTL 7.24e-01 -0.0337 0.0953 0.84 B L1
ENSG00000027697 IFNGR1 605919 sc-eQTL 5.26e-01 0.0588 0.0927 0.84 B L1
ENSG00000051620 HEBP2 -578163 sc-eQTL 9.50e-01 0.00458 0.0728 0.84 B L1
ENSG00000112378 PERP -282051 sc-eQTL 4.99e-01 0.0492 0.0726 0.84 B L1
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 2.67e-02 -0.129 0.0579 0.84 B L1
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 3.90e-01 -0.0792 0.0919 0.84 B L1
ENSG00000024862 CCDC28A -948141 sc-eQTL 6.13e-01 -0.0545 0.107 0.84 CD4T L1
ENSG00000027697 IFNGR1 605919 sc-eQTL 3.20e-01 0.0625 0.0628 0.84 CD4T L1
ENSG00000051620 HEBP2 -578163 sc-eQTL 5.28e-01 0.0456 0.0721 0.84 CD4T L1
ENSG00000112378 PERP -282051 sc-eQTL 1.08e-01 0.109 0.0676 0.84 CD4T L1
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 1.99e-04 -0.234 0.0617 0.84 CD4T L1
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 9.79e-01 -0.00214 0.0802 0.84 CD4T L1
ENSG00000024862 CCDC28A -948141 sc-eQTL 2.08e-01 0.15 0.119 0.84 CD8T L1
ENSG00000027697 IFNGR1 605919 sc-eQTL 7.54e-01 0.0228 0.0728 0.84 CD8T L1
ENSG00000051620 HEBP2 -578163 sc-eQTL 4.33e-01 0.0612 0.0778 0.84 CD8T L1
ENSG00000112378 PERP -282051 sc-eQTL 5.02e-01 0.0533 0.0793 0.84 CD8T L1
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 7.43e-04 -0.204 0.0596 0.84 CD8T L1
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 9.46e-02 -0.15 0.0894 0.84 CD8T L1
ENSG00000024862 CCDC28A -948141 sc-eQTL 1.22e-01 -0.179 0.115 0.838 DC L1
ENSG00000027697 IFNGR1 605919 sc-eQTL 6.89e-01 -0.0345 0.086 0.838 DC L1
ENSG00000051620 HEBP2 -578163 sc-eQTL 4.33e-01 0.064 0.0814 0.838 DC L1
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 6.86e-01 0.0373 0.0919 0.838 DC L1
ENSG00000135540 NHSL1 -867203 sc-eQTL 3.09e-01 -0.108 0.106 0.838 DC L1
ENSG00000225177 AL590617.2 -867180 sc-eQTL 9.96e-01 -0.000517 0.111 0.838 DC L1
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 1.44e-01 0.137 0.0932 0.838 DC L1
ENSG00000024862 CCDC28A -948141 sc-eQTL 3.66e-01 -0.0777 0.0858 0.84 Mono L1
ENSG00000027697 IFNGR1 605919 sc-eQTL 2.64e-01 -0.0819 0.0731 0.84 Mono L1
ENSG00000051620 HEBP2 -578163 sc-eQTL 6.39e-01 0.0279 0.0594 0.84 Mono L1
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 2.86e-01 -0.0664 0.062 0.84 Mono L1
ENSG00000135540 NHSL1 -867203 sc-eQTL 5.59e-01 -0.0657 0.112 0.84 Mono L1
ENSG00000225177 AL590617.2 -867180 sc-eQTL 8.81e-02 0.199 0.116 0.84 Mono L1
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 5.87e-02 -0.145 0.0764 0.84 Mono L1
ENSG00000024862 CCDC28A -948141 sc-eQTL 3.65e-01 -0.0928 0.102 0.841 NK L1
ENSG00000027697 IFNGR1 605919 sc-eQTL 9.15e-01 0.00838 0.0788 0.841 NK L1
ENSG00000051620 HEBP2 -578163 sc-eQTL 7.81e-01 0.0252 0.0903 0.841 NK L1
ENSG00000112378 PERP -282051 sc-eQTL 4.34e-01 0.06 0.0765 0.841 NK L1
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 1.87e-06 -0.305 0.0622 0.841 NK L1
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 3.54e-01 -0.0862 0.0928 0.841 NK L1
ENSG00000024862 CCDC28A -948141 sc-eQTL 2.90e-01 -0.131 0.123 0.84 Other_T L1
ENSG00000027697 IFNGR1 605919 sc-eQTL 5.08e-01 -0.05 0.0753 0.84 Other_T L1
ENSG00000051620 HEBP2 -578163 sc-eQTL 3.79e-01 0.0704 0.0798 0.84 Other_T L1
ENSG00000112378 PERP -282051 sc-eQTL 7.22e-01 0.0351 0.0986 0.84 Other_T L1
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 1.74e-05 -0.198 0.0449 0.84 Other_T L1
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 3.41e-02 -0.197 0.0921 0.84 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -948141 sc-eQTL 7.43e-01 -0.044 0.134 0.832 B_Activated L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 3.37e-01 0.115 0.119 0.832 B_Activated L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 6.49e-01 -0.0536 0.117 0.832 B_Activated L2
ENSG00000112378 PERP -282051 sc-eQTL 1.06e-01 0.0983 0.0605 0.832 B_Activated L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 2.25e-01 -0.143 0.118 0.832 B_Activated L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 3.04e-01 0.106 0.103 0.832 B_Activated L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 3.28e-01 0.116 0.118 0.839 B_Intermediate L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 3.84e-01 0.0953 0.109 0.839 B_Intermediate L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 8.42e-02 0.141 0.0814 0.839 B_Intermediate L2
ENSG00000112378 PERP -282051 sc-eQTL 7.42e-01 0.0344 0.104 0.839 B_Intermediate L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 3.42e-02 -0.173 0.081 0.839 B_Intermediate L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 2.19e-02 -0.265 0.115 0.839 B_Intermediate L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 6.87e-01 0.0482 0.119 0.838 B_Memory L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 6.31e-01 0.0566 0.118 0.838 B_Memory L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 4.89e-01 0.0622 0.0898 0.838 B_Memory L2
ENSG00000112378 PERP -282051 sc-eQTL 4.24e-01 -0.0897 0.112 0.838 B_Memory L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 2.25e-01 -0.0936 0.0768 0.838 B_Memory L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 6.21e-01 -0.0569 0.115 0.838 B_Memory L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 8.29e-01 -0.0246 0.113 0.84 B_Naive1 L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 7.29e-01 0.0325 0.0937 0.84 B_Naive1 L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 7.28e-01 0.0278 0.0797 0.84 B_Naive1 L2
ENSG00000112378 PERP -282051 sc-eQTL 8.27e-01 0.0237 0.108 0.84 B_Naive1 L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 3.32e-04 -0.222 0.0608 0.84 B_Naive1 L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 3.31e-01 -0.0955 0.098 0.84 B_Naive1 L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 4.22e-01 -0.0899 0.112 0.839 B_Naive2 L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 2.04e-01 0.146 0.115 0.839 B_Naive2 L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 5.10e-01 -0.0504 0.0764 0.839 B_Naive2 L2
ENSG00000112378 PERP -282051 sc-eQTL 8.27e-01 0.0201 0.0919 0.839 B_Naive2 L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 3.67e-02 -0.191 0.0909 0.839 B_Naive2 L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 7.06e-01 0.0448 0.119 0.839 B_Naive2 L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 3.47e-01 -0.108 0.114 0.841 CD4_CTL L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 1.10e-02 0.271 0.106 0.841 CD4_CTL L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 4.33e-01 0.0776 0.0989 0.841 CD4_CTL L2
ENSG00000112378 PERP -282051 sc-eQTL 6.06e-01 0.0623 0.121 0.841 CD4_CTL L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 1.32e-06 -0.331 0.0663 0.841 CD4_CTL L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 9.98e-01 -0.000338 0.11 0.841 CD4_CTL L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 3.59e-01 -0.103 0.112 0.84 CD4_Naive L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 1.20e-01 0.092 0.0589 0.84 CD4_Naive L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 3.95e-01 0.0595 0.0698 0.84 CD4_Naive L2
ENSG00000112378 PERP -282051 sc-eQTL 3.43e-01 0.0876 0.0921 0.84 CD4_Naive L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 7.81e-04 -0.215 0.0631 0.84 CD4_Naive L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 9.10e-01 0.00947 0.0839 0.84 CD4_Naive L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 8.17e-01 -0.0256 0.11 0.84 CD4_TCM L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 6.53e-01 0.0374 0.0829 0.84 CD4_TCM L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 9.81e-01 -0.00198 0.0821 0.84 CD4_TCM L2
ENSG00000112378 PERP -282051 sc-eQTL 8.31e-01 0.022 0.103 0.84 CD4_TCM L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 3.61e-04 -0.21 0.058 0.84 CD4_TCM L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 9.32e-01 -0.00715 0.0838 0.84 CD4_TCM L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 3.42e-01 0.121 0.127 0.84 CD4_TEM L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 4.87e-01 -0.067 0.0962 0.84 CD4_TEM L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 1.10e-01 0.138 0.0861 0.84 CD4_TEM L2
ENSG00000112378 PERP -282051 sc-eQTL 3.29e-01 0.0983 0.101 0.84 CD4_TEM L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 3.49e-04 -0.226 0.0621 0.84 CD4_TEM L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 1.67e-01 0.142 0.102 0.84 CD4_TEM L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 1.15e-01 0.2 0.126 0.84 CD8_CTL L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 4.69e-01 -0.0622 0.0856 0.84 CD8_CTL L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 5.32e-01 0.0568 0.0908 0.84 CD8_CTL L2
ENSG00000112378 PERP -282051 sc-eQTL 4.87e-01 0.0788 0.113 0.84 CD8_CTL L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 9.36e-05 -0.277 0.0696 0.84 CD8_CTL L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 5.00e-02 -0.198 0.1 0.84 CD8_CTL L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 8.31e-01 0.0261 0.122 0.84 CD8_Naive L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 9.41e-02 0.143 0.0848 0.84 CD8_Naive L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 5.89e-01 0.0423 0.0781 0.84 CD8_Naive L2
ENSG00000112378 PERP -282051 sc-eQTL 9.97e-01 0.000302 0.094 0.84 CD8_Naive L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 1.37e-03 -0.211 0.0651 0.84 CD8_Naive L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 1.57e-01 -0.139 0.0982 0.84 CD8_Naive L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 7.80e-01 -0.0386 0.138 0.84 CD8_TCM L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 1.49e-01 -0.164 0.113 0.84 CD8_TCM L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 1.46e-01 -0.141 0.0965 0.84 CD8_TCM L2
ENSG00000112378 PERP -282051 sc-eQTL 6.95e-01 0.0503 0.128 0.84 CD8_TCM L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 4.37e-03 -0.175 0.0605 0.84 CD8_TCM L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 5.62e-01 0.0656 0.113 0.84 CD8_TCM L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 7.09e-01 0.0469 0.125 0.845 CD8_TEM L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 1.94e-01 0.141 0.108 0.845 CD8_TEM L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 3.46e-01 -0.107 0.114 0.845 CD8_TEM L2
ENSG00000112378 PERP -282051 sc-eQTL 2.90e-01 0.137 0.13 0.845 CD8_TEM L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 2.92e-04 -0.285 0.0774 0.845 CD8_TEM L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 9.14e-01 -0.0128 0.119 0.845 CD8_TEM L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 2.45e-02 -0.302 0.133 0.842 MAIT L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 9.95e-01 -0.000496 0.0877 0.842 MAIT L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 3.10e-01 0.0951 0.0935 0.842 MAIT L2
ENSG00000112378 PERP -282051 sc-eQTL 8.32e-02 0.214 0.123 0.842 MAIT L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 6.34e-03 -0.16 0.0579 0.842 MAIT L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 1.06e-01 -0.176 0.108 0.842 MAIT L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 7.99e-01 -0.0308 0.121 0.84 NK_CD56bright L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 9.85e-01 -0.00182 0.0946 0.84 NK_CD56bright L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 9.67e-01 -0.00431 0.103 0.84 NK_CD56bright L2
ENSG00000112378 PERP -282051 sc-eQTL 6.24e-01 0.0541 0.11 0.84 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 1.46e-02 -0.171 0.0694 0.84 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 9.66e-01 0.0048 0.112 0.84 NK_CD56bright L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 4.07e-02 -0.225 0.109 0.843 NK_CD56dim L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 4.38e-01 -0.0563 0.0725 0.843 NK_CD56dim L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 6.87e-01 0.0395 0.098 0.843 NK_CD56dim L2
ENSG00000112378 PERP -282051 sc-eQTL 4.10e-01 0.0725 0.0877 0.843 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 8.34e-06 -0.298 0.0652 0.843 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 6.69e-01 -0.0439 0.102 0.843 NK_CD56dim L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 1.17e-01 0.197 0.125 0.838 NK_HLA L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 2.69e-01 0.102 0.0922 0.838 NK_HLA L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 8.51e-01 0.0202 0.107 0.838 NK_HLA L2
ENSG00000112378 PERP -282051 sc-eQTL 5.28e-01 0.0602 0.0952 0.838 NK_HLA L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 4.29e-04 -0.254 0.071 0.838 NK_HLA L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 8.10e-01 -0.0285 0.118 0.838 NK_HLA L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 1.97e-01 -0.146 0.113 0.843 NK_cytokine L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 6.28e-01 -0.0369 0.0761 0.843 NK_cytokine L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 5.58e-01 -0.0571 0.0973 0.843 NK_cytokine L2
ENSG00000112378 PERP -282051 sc-eQTL 1.80e-01 0.121 0.0903 0.843 NK_cytokine L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 5.65e-08 -0.357 0.0633 0.843 NK_cytokine L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 4.49e-01 -0.0776 0.102 0.843 NK_cytokine L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 4.15e-01 0.114 0.139 0.822 PB L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 5.29e-01 0.0931 0.147 0.822 PB L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 8.77e-01 -0.0193 0.124 0.822 PB L2
ENSG00000112378 PERP -282051 sc-eQTL 9.77e-01 0.00276 0.0946 0.822 PB L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 8.09e-01 -0.0278 0.115 0.822 PB L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 9.26e-02 -0.231 0.136 0.822 PB L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 1.09e-01 0.209 0.13 0.837 Pro_T L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 8.63e-01 0.0172 0.0995 0.837 Pro_T L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 4.82e-01 0.0731 0.104 0.837 Pro_T L2
ENSG00000112378 PERP -282051 sc-eQTL 2.70e-01 0.106 0.0958 0.837 Pro_T L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 2.51e-01 -0.0695 0.0604 0.837 Pro_T L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 5.65e-01 0.0677 0.118 0.837 Pro_T L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 2.54e-01 0.138 0.12 0.84 Treg L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 6.07e-01 0.0585 0.114 0.84 Treg L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 7.76e-01 0.0235 0.0825 0.84 Treg L2
ENSG00000112378 PERP -282051 sc-eQTL 1.37e-01 0.193 0.129 0.84 Treg L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 1.84e-06 -0.336 0.0685 0.84 Treg L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 7.91e-02 -0.193 0.109 0.84 Treg L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 6.55e-01 -0.0542 0.121 0.849 cDC L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 8.03e-01 -0.0247 0.0986 0.849 cDC L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 7.06e-01 0.0328 0.0868 0.849 cDC L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 4.56e-01 0.0725 0.0971 0.849 cDC L2
ENSG00000135540 NHSL1 -867203 sc-eQTL 6.61e-01 -0.0495 0.113 0.849 cDC L2
ENSG00000225177 AL590617.2 -867180 sc-eQTL 5.20e-01 0.08 0.124 0.849 cDC L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 2.37e-01 0.15 0.126 0.849 cDC L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 9.06e-03 -0.244 0.0928 0.84 cMono_IL1B L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 2.02e-01 -0.0876 0.0685 0.84 cMono_IL1B L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 3.66e-01 0.0613 0.0676 0.84 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 4.95e-01 -0.0505 0.0739 0.84 cMono_IL1B L2
ENSG00000135540 NHSL1 -867203 sc-eQTL 3.13e-01 -0.114 0.113 0.84 cMono_IL1B L2
ENSG00000225177 AL590617.2 -867180 sc-eQTL 1.40e-01 0.175 0.118 0.84 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 4.50e-03 -0.223 0.0775 0.84 cMono_IL1B L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 5.68e-02 0.204 0.107 0.84 cMono_S100A L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 4.02e-01 -0.0664 0.079 0.84 cMono_S100A L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 9.11e-01 0.00824 0.0737 0.84 cMono_S100A L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 7.48e-01 0.0226 0.0703 0.84 cMono_S100A L2
ENSG00000135540 NHSL1 -867203 sc-eQTL 6.07e-01 0.0593 0.115 0.84 cMono_S100A L2
ENSG00000225177 AL590617.2 -867180 sc-eQTL 4.17e-01 0.103 0.126 0.84 cMono_S100A L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 6.31e-01 -0.0485 0.101 0.84 cMono_S100A L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 2.53e-01 0.166 0.144 0.839 gdT L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 1.30e-01 -0.175 0.115 0.839 gdT L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 2.51e-01 0.159 0.138 0.839 gdT L2
ENSG00000112378 PERP -282051 sc-eQTL 6.61e-01 0.0564 0.128 0.839 gdT L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 2.80e-05 -0.29 0.0671 0.839 gdT L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 1.33e-01 -0.194 0.128 0.839 gdT L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 9.19e-03 0.322 0.122 0.84 intMono L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 8.55e-01 -0.0153 0.0838 0.84 intMono L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 7.65e-01 0.025 0.0835 0.84 intMono L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 9.45e-03 -0.186 0.0711 0.84 intMono L2
ENSG00000135540 NHSL1 -867203 sc-eQTL 5.43e-01 -0.0686 0.112 0.84 intMono L2
ENSG00000225177 AL590617.2 -867180 sc-eQTL 2.32e-01 0.151 0.126 0.84 intMono L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 3.43e-01 -0.102 0.108 0.84 intMono L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 2.65e-01 -0.133 0.119 0.848 ncMono L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 5.57e-01 0.0598 0.102 0.848 ncMono L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 8.82e-01 0.0106 0.0714 0.848 ncMono L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 1.38e-01 -0.134 0.0897 0.848 ncMono L2
ENSG00000135540 NHSL1 -867203 sc-eQTL 6.96e-01 0.045 0.115 0.848 ncMono L2
ENSG00000225177 AL590617.2 -867180 sc-eQTL 1.65e-01 0.177 0.127 0.848 ncMono L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 1.07e-01 0.182 0.112 0.848 ncMono L2
ENSG00000024862 CCDC28A -948141 sc-eQTL 2.22e-01 -0.169 0.138 0.853 pDC L2
ENSG00000027697 IFNGR1 605919 sc-eQTL 5.82e-01 -0.0647 0.117 0.853 pDC L2
ENSG00000051620 HEBP2 -578163 sc-eQTL 6.73e-02 0.196 0.106 0.853 pDC L2
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 6.52e-01 -0.0491 0.109 0.853 pDC L2
ENSG00000135540 NHSL1 -867203 sc-eQTL 9.38e-01 0.00838 0.107 0.853 pDC L2
ENSG00000225177 AL590617.2 -867180 sc-eQTL 5.82e-01 0.0593 0.107 0.853 pDC L2
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 8.05e-01 -0.0273 0.11 0.853 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -948141 sc-eQTL 7.17e-01 0.0416 0.114 0.84 B_Memory LOneK1K
ENSG00000027697 IFNGR1 605919 sc-eQTL 7.23e-01 0.0347 0.0978 0.84 B_Memory LOneK1K
ENSG00000051620 HEBP2 -578163 sc-eQTL 7.72e-02 0.14 0.0787 0.84 B_Memory LOneK1K
ENSG00000112378 PERP -282051 sc-eQTL 7.33e-01 0.0357 0.104 0.84 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 1.96e-01 -0.0891 0.0687 0.84 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 6.61e-02 -0.214 0.116 0.84 B_Memory LOneK1K
ENSG00000024862 CCDC28A -948141 sc-eQTL 8.43e-01 -0.021 0.106 0.84 B_Naive LOneK1K
ENSG00000027697 IFNGR1 605919 sc-eQTL 2.26e-01 0.12 0.0986 0.84 B_Naive LOneK1K
ENSG00000051620 HEBP2 -578163 sc-eQTL 8.25e-01 -0.0162 0.0734 0.84 B_Naive LOneK1K
ENSG00000112378 PERP -282051 sc-eQTL 9.07e-01 0.0126 0.108 0.84 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 2.48e-03 -0.17 0.0554 0.84 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 6.77e-01 -0.0421 0.101 0.84 B_Naive LOneK1K
ENSG00000024862 CCDC28A -948141 sc-eQTL 4.26e-01 -0.0688 0.0863 0.84 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 605919 sc-eQTL 1.98e-01 -0.0884 0.0685 0.84 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -578163 sc-eQTL 4.61e-01 0.0475 0.0643 0.84 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 6.98e-01 -0.0247 0.0636 0.84 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -867203 sc-eQTL 5.08e-01 -0.075 0.113 0.84 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -867180 sc-eQTL 2.28e-01 0.146 0.121 0.84 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 1.19e-02 -0.191 0.0751 0.84 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -948141 sc-eQTL 2.66e-01 0.131 0.118 0.841 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 605919 sc-eQTL 8.14e-01 -0.0195 0.0826 0.841 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -578163 sc-eQTL 6.06e-01 -0.0326 0.063 0.841 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 8.74e-02 -0.132 0.0767 0.841 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -867203 sc-eQTL 7.78e-01 0.0317 0.112 0.841 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -867180 sc-eQTL 4.07e-01 0.103 0.124 0.841 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 5.15e-01 0.0675 0.103 0.841 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -948141 sc-eQTL 1.71e-01 -0.146 0.106 0.843 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 605919 sc-eQTL 8.71e-01 -0.0121 0.0745 0.843 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -578163 sc-eQTL 9.32e-01 0.00788 0.0924 0.843 NK_CD56dim LOneK1K
ENSG00000112378 PERP -282051 sc-eQTL 2.79e-01 0.0843 0.0777 0.843 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -41846 sc-eQTL 2.38e-06 -0.312 0.0643 0.843 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -42865 sc-eQTL 2.63e-01 -0.106 0.0947 0.843 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000118503 TNFAIP3 -41846 eQTL 0.000101 -0.0695 0.0178 0.00962 0.00801 0.141
ENSG00000220412 AL356234.1 118167 eQTL 0.00162 -0.104 0.033 0.00449 0.00268 0.141
ENSG00000226004 AL591468.1 -120434 eQTL 0.0013 0.0994 0.0308 0.0 0.0 0.141
ENSG00000237499 AL357060.1 -42865 eQTL 1.09e-05 -0.0753 0.017 0.0233 0.0207 0.141

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000051620 \N -578163 2.69e-07 1.16e-07 4.08e-08 1.79e-07 9.91e-08 9.32e-08 1.41e-07 5.24e-08 1.42e-07 4.24e-08 1.62e-07 7.58e-08 1.26e-07 6.21e-08 4.84e-08 8.01e-08 3.9e-08 1.1e-07 5.2e-08 3.59e-08 1.06e-07 1.3e-07 1.3e-07 4.67e-08 1.31e-07 1.15e-07 1.1e-07 8.71e-08 9.97e-08 1.1e-07 9.75e-08 3.71e-08 2.74e-08 8.65e-08 8.87e-08 3.97e-08 4.78e-08 9.06e-08 8.3e-08 3e-08 3.16e-08 1.36e-07 4.12e-08 1.25e-08 5.75e-08 1.67e-08 1.25e-07 4.5e-09 4.74e-08
ENSG00000118503 TNFAIP3 -41846 2.26e-05 1.96e-05 1.31e-06 7.23e-06 2.14e-06 6.12e-06 1.88e-05 1.59e-06 1.12e-05 5.42e-06 1.49e-05 6.05e-06 2.02e-05 3.96e-06 3.41e-06 6.61e-06 6.37e-06 8.89e-06 2.67e-06 2.65e-06 5.16e-06 1.11e-05 1.02e-05 3.29e-06 2.22e-05 3.9e-06 4.84e-06 3.96e-06 1.37e-05 8.22e-06 7.65e-06 9.42e-07 6.77e-07 2.77e-06 4.09e-06 1.68e-06 1.35e-06 9.08e-07 1.84e-06 9.06e-07 4.72e-07 1.57e-05 1.39e-06 1.64e-07 7.96e-07 1.49e-06 1.28e-06 6.84e-07 5.85e-07
ENSG00000226004 AL591468.1 -120434 5.66e-06 5.78e-06 5.96e-07 2.76e-06 4.58e-07 1.7e-06 3.38e-06 5.6e-07 3.17e-06 1.4e-06 4.16e-06 2.58e-06 7.12e-06 1.52e-06 9.27e-07 1.7e-06 1.9e-06 2.7e-06 1.38e-06 1.29e-06 1.39e-06 3.73e-06 3.45e-06 1.8e-06 4.81e-06 1.24e-06 1.29e-06 1.8e-06 3.74e-06 3.38e-06 2.05e-06 4.14e-07 6.41e-07 1.22e-06 1.81e-06 9.48e-07 7.68e-07 3.35e-07 1.21e-06 3.63e-07 2.8e-07 4.71e-06 5.92e-07 1.89e-07 3.61e-07 3.61e-07 8.68e-07 1.41e-07 2.13e-07
ENSG00000237499 AL357060.1 -42865 2.17e-05 1.9e-05 1.23e-06 7.13e-06 2.12e-06 6.03e-06 1.84e-05 1.55e-06 1.07e-05 5.39e-06 1.44e-05 6.14e-06 2e-05 3.95e-06 3.26e-06 6.52e-06 6.1e-06 8.43e-06 2.63e-06 2.62e-06 4.99e-06 1.1e-05 1.01e-05 3.2e-06 2.16e-05 3.77e-06 4.75e-06 3.89e-06 1.33e-05 8.01e-06 7.63e-06 9.02e-07 6.67e-07 2.78e-06 3.99e-06 1.68e-06 1.36e-06 8.34e-07 1.76e-06 8.7e-07 4.03e-07 1.51e-05 1.47e-06 1.7e-07 7.87e-07 1.48e-06 1.26e-06 6.71e-07 6.01e-07