JOB

Genes within 1Mb (rs671):

View on , UCSC , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force

(Shown only for PIP>0.001)

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Gene ID	Gene Symbol	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	PIP (SuSiE)	PIP (FINEMAP)	MAF

Gene ID	Gene Symbol	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	PIP (SuSiE)	PIP (FINEMAP)	MAF
ENSG00000089022	MAPKAPK5	-38266	eQTL	1.01e-04	-0.0671	0.0172	0.0	0.0	0.251
ENSG00000089169	RPH3A	-766418	eQTL	2.52e-20	-0.313	0.0331	0.0	0.0	0.251
ENSG00000089234	BRAP	118006	pQTL	2.61e-05	-0.0719	0.017	0.0767	0.0617	0.243
ENSG00000089248	ERP29	-209386	eQTL	3.75e-01	0.0134	0.0151	0.00268	0.0	0.251
ENSG00000111249	CUX2	769797	eQTL	5.94e-03	0.08	0.029	0.00307	0.00108	0.251
ENSG00000111252	SH2B3	398014	pQTL	2.00e-02	-0.0394	0.0169	0.0	0.0	0.243
ENSG00000111271	ACAD10	117898	eQTL	9.54e-02	-0.0285	0.0171	0.00107	0.0	0.251
ENSG00000111275	ALDH2	37075	pQTL	8.42e-49	-0.428	0.0279	0.0926	0.13	0.243
ENSG00000111275	ALDH2	37075	eQTL	3.51e-12	-0.133	0.0189	0.354	0.339	0.251
ENSG00000111300	NAA25	-304834	eQTL	3.01e-05	-0.0579	0.0138	0.0	0.0	0.251

Showing 1 to 10 of 18 entries

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Expression Modifier Score(EMS) for GTEx 49tissues

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Gene ID	Gene Symbol	TSS Distance	Whole Blood	Muscle Skeletal	Liver	Brain Cerebellum	Prostate	Spleen	Skin Sun Exposed Lower leg	Artery Coronary	Esophagus Muscularis	Esophagus Gastroesophageal Junction	Artery Tibial	Heart Atrial Appendage	Nerve Tibial	Heart Left Ventricle	Adrenal Gland	Adipose Visceral Omentum	Pancreas	Lung	Pituitary	Brain Nucleus accumbens basal ganglia	Colon Transverse	Adipose Subcutaneous	Esophagus Mucosa	Brain Cortex	Thyroid	Stomach	Breast Mammary Tissue	Colon Sigmoid	Skin Not Sun Exposed Suprapubic	Testis	Artery Aorta	Brain Amygdala	Brain Anterior cingulate cortex BA24	Brain Caudate basal ganglia	Brain Cerebellar Hemisphere	Brain Frontal Cortex BA9	Brain Hippocampus	Brain Hypothalamus	Brain Putamen basal ganglia	Brain Spinal cord cervical c-1	Brain Substantia nigra	Cells Cultured fibroblasts	Cells EBV-transformed lymphocytes	Kidney Cortex	Minor Salivary Gland	Ovary	Small Intestine Terminal Ileum	Uterus	Vagina

Gene ID	Gene Symbol	TSS Distance	Whole Blood	Muscle Skeletal	Liver	Brain Cerebellum	Prostate	Spleen	Skin Sun Exposed Lower leg	Artery Coronary	Esophagus Muscularis	Esophagus Gastroesophageal Junction	Artery Tibial	Heart Atrial Appendage	Nerve Tibial	Heart Left Ventricle	Adrenal Gland	Adipose Visceral Omentum	Pancreas	Lung	Pituitary	Brain Nucleus accumbens basal ganglia	Colon Transverse	Adipose Subcutaneous	Esophagus Mucosa	Brain Cortex	Thyroid	Stomach	Breast Mammary Tissue	Colon Sigmoid	Skin Not Sun Exposed Suprapubic	Testis	Artery Aorta	Brain Amygdala	Brain Anterior cingulate cortex BA24	Brain Caudate basal ganglia	Brain Cerebellar Hemisphere	Brain Frontal Cortex BA9	Brain Hippocampus	Brain Hypothalamus	Brain Putamen basal ganglia	Brain Spinal cord cervical c-1	Brain Substantia nigra	Cells Cultured fibroblasts	Cells EBV-transformed lymphocytes	Kidney Cortex	Minor Salivary Gland	Ovary	Small Intestine Terminal Ileum	Uterus	Vagina
ENSG00000089022	MAPKAPK5	-38266	2.69e-05	2.79e-05	4.6e-06	1.42e-05	3.92e-06	1.04e-05	3.71e-05	3.72e-06	2.41e-05	1.11e-05	3.02e-05	1.13e-05	3.96e-05	1.06e-05	5.97e-06	1.42e-05	1.22e-05	1.98e-05	6.32e-06	5.37e-06	9.77e-06	2.7e-05	2.49e-05	6.63e-06	3.59e-05	6.16e-06	1.06e-05	9.19e-06	2.69e-05	2.02e-05	1.39e-05	1.62e-06	1.9e-06	6.04e-06	1.03e-05	4.5e-06	2.4e-06	2.72e-06	3.98e-06	2.66e-06	1.63e-06	3.45e-05	2.71e-06	3.63e-07	1.95e-06	2.95e-06	3.35e-06	1.35e-06	1.23e-06
ENSG00000089169	RPH3A	-766418	5.14e-07	2.17e-07	6.42e-08	3.58e-07	1.09e-07	1.57e-07	3.11e-07	6.57e-08	2.01e-07	1.11e-07	2.38e-07	1.48e-07	2.74e-07	9.48e-08	1.18e-07	1.14e-07	4.35e-08	2.21e-07	9.19e-08	7.84e-08	1.39e-07	2.3e-07	1.89e-07	4.15e-08	2.86e-07	1.51e-07	1.72e-07	1.36e-07	1.44e-07	1.85e-07	1.27e-07	6.56e-08	4.96e-08	1.69e-07	2.85e-07	5.14e-08	2.98e-07	7.93e-08	4.99e-08	4.41e-08	4.51e-08	2.8e-07	7.53e-08	1.98e-07	3.29e-08	2.07e-08	8.98e-08	1.11e-08	5.49e-08
ENSG00000111249	CUX2	769797	4.89e-07	1.92e-07	6.42e-08	3.58e-07	1.11e-07	1.57e-07	3.11e-07	6.57e-08	2.01e-07	1.11e-07	2.18e-07	1.46e-07	2.55e-07	9.48e-08	1.12e-07	1.14e-07	4.35e-08	2.21e-07	8.93e-08	7.29e-08	1.39e-07	2.3e-07	1.86e-07	4.15e-08	2.86e-07	1.51e-07	1.72e-07	1.36e-07	1.4e-07	1.81e-07	1.27e-07	6.56e-08	5.2e-08	1.67e-07	2.82e-07	5.14e-08	2.96e-07	7.75e-08	4.99e-08	4.41e-08	4.46e-08	2.8e-07	6.64e-08	1.98e-07	3.29e-08	1.55e-08	8.98e-08	1.11e-08	5.49e-08
ENSG00000111275	ALDH2	37075	2.78e-05	2.83e-05	4.84e-06	1.44e-05	4.03e-06	1.07e-05	3.78e-05	3.75e-06	2.44e-05	1.13e-05	3.05e-05	1.16e-05	3.98e-05	1.07e-05	5.99e-06	1.45e-05	1.27e-05	2.02e-05	6.31e-06	5.32e-06	9.95e-06	2.74e-05	2.52e-05	6.81e-06	3.63e-05	6.28e-06	1.08e-05	9.35e-06	2.73e-05	2.05e-05	1.44e-05	1.64e-06	1.89e-06	6.27e-06	1.04e-05	4.56e-06	2.48e-06	2.76e-06	4e-06	2.66e-06	1.63e-06	3.49e-05	2.76e-06	3.63e-07	1.97e-06	2.98e-06	3.38e-06	1.34e-06	1.3e-06
ENSG00000111300	NAA25	-304834	2.69e-06	2.43e-06	2.51e-07	2.24e-06	4.86e-07	7.88e-07	1.48e-06	4.01e-07	1.89e-06	7.65e-07	1.97e-06	1.36e-06	3.42e-06	1.42e-06	6.96e-07	1.45e-06	1.11e-06	1.36e-06	5.4e-07	1.27e-06	7.87e-07	3.06e-06	1.71e-06	9.28e-07	2.73e-06	9.19e-07	1.31e-06	1.29e-06	1.71e-06	1.67e-06	9.97e-07	5.41e-07	3.94e-07	1.65e-06	1.74e-06	9.68e-07	9.38e-07	3.79e-07	9.39e-07	2.8e-07	1.96e-07	3.38e-06	4.77e-07	1.47e-07	2.85e-07	6.75e-07	2.87e-07	1.83e-07	2.05e-07
ENSG00000173064	HECTD4	-578477	1.09e-06	6.09e-07	9.89e-08	3.77e-07	9.61e-08	3.08e-07	5.8e-07	1.38e-07	5.74e-07	2.34e-07	8.15e-07	3.5e-07	7.71e-07	2.1e-07	3.31e-07	2.84e-07	1.73e-07	3.95e-07	2.56e-07	2.73e-07	2.48e-07	5.37e-07	3.77e-07	1.63e-07	8.62e-07	2.4e-07	4.34e-07	2.65e-07	3.86e-07	6.27e-07	3.1e-07	1.56e-07	5.37e-08	6.53e-07	3.6e-07	1.94e-07	7.49e-07	1.46e-07	8.43e-08	7.55e-08	1.12e-07	7.54e-07	2.32e-07	1.84e-07	8.24e-08	1.26e-07	9.83e-08	8.97e-08	5.62e-08
ENSG00000198324	PHETA1	434841	1.24e-06	9.3e-07	2.79e-07	1.29e-06	3.37e-07	6.05e-07	1.24e-06	3.2e-07	1.38e-06	3.87e-07	1.39e-06	5.6e-07	1.76e-06	2.92e-07	5.17e-07	7.95e-07	7.79e-07	5.66e-07	5.29e-07	6.56e-07	4.48e-07	1.56e-06	7.78e-07	5.91e-07	1.95e-06	2.8e-07	8.73e-07	6e-07	1.01e-06	1.12e-06	5.45e-07	2.65e-07	2.16e-07	7.02e-07	5.66e-07	4.46e-07	7.68e-07	3.43e-07	3.95e-07	8.66e-09	2.67e-07	1.55e-06	4.14e-07	1.6e-07	1.91e-07	3.21e-07	1.67e-07	1.15e-07	1.57e-07

Showing 1 to 7 of 7 entries