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Genes within 1Mb (chr6:137412420:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 192971 sc-eQTL 1.51e-01 -0.284 0.197 0.051 B_Activated L2
ENSG00000051620 HEBP2 -991111 sc-eQTL 8.73e-01 -0.031 0.194 0.051 B_Activated L2
ENSG00000112357 PEX7 589856 sc-eQTL 4.30e-01 0.154 0.195 0.051 B_Activated L2
ENSG00000112378 PERP -694999 sc-eQTL 4.63e-01 -0.0741 0.101 0.051 B_Activated L2
ENSG00000118503 TNFAIP3 -454794 sc-eQTL 3.08e-01 0.199 0.195 0.051 B_Activated L2
ENSG00000197442 MAP3K5 619943 sc-eQTL 7.57e-01 0.0679 0.219 0.051 B_Activated L2
ENSG00000237499 WAKMAR2 -455813 sc-eQTL 7.85e-01 -0.0466 0.171 0.051 B_Activated L2
ENSG00000027697 IFNGR1 192971 sc-eQTL 3.54e-01 -0.166 0.179 0.05 CD4_CTL L2
ENSG00000051620 HEBP2 -991111 sc-eQTL 2.36e-02 0.372 0.163 0.05 CD4_CTL L2
ENSG00000112357 PEX7 589856 sc-eQTL 2.20e-01 -0.243 0.198 0.05 CD4_CTL L2
ENSG00000112378 PERP -694999 sc-eQTL 2.59e-01 0.227 0.2 0.05 CD4_CTL L2
ENSG00000118503 TNFAIP3 -454794 sc-eQTL 8.63e-01 0.0202 0.117 0.05 CD4_CTL L2
ENSG00000197442 MAP3K5 619943 sc-eQTL 4.29e-03 0.53 0.183 0.05 CD4_CTL L2
ENSG00000237499 WAKMAR2 -455813 sc-eQTL 8.68e-01 -0.0304 0.183 0.05 CD4_CTL L2
ENSG00000027697 IFNGR1 192971 sc-eQTL 3.59e-01 -0.14 0.153 0.05 NK_HLA L2
ENSG00000051620 HEBP2 -991111 sc-eQTL 1.27e-01 0.271 0.176 0.05 NK_HLA L2
ENSG00000112357 PEX7 589856 sc-eQTL 6.94e-01 0.0766 0.194 0.05 NK_HLA L2
ENSG00000112378 PERP -694999 sc-eQTL 4.08e-01 0.131 0.157 0.05 NK_HLA L2
ENSG00000118503 TNFAIP3 -454794 sc-eQTL 1.13e-02 0.305 0.119 0.05 NK_HLA L2
ENSG00000197442 MAP3K5 619943 sc-eQTL 2.01e-03 0.589 0.188 0.05 NK_HLA L2
ENSG00000237499 WAKMAR2 -455813 sc-eQTL 6.35e-01 0.0929 0.195 0.05 NK_HLA L2
ENSG00000027697 IFNGR1 192971 sc-eQTL 1.91e-01 0.281 0.213 0.063 PB L2
ENSG00000051620 HEBP2 -991111 sc-eQTL 4.35e-01 0.141 0.18 0.063 PB L2
ENSG00000112357 PEX7 589856 sc-eQTL 4.57e-01 -0.164 0.22 0.063 PB L2
ENSG00000112378 PERP -694999 sc-eQTL 8.60e-01 0.0243 0.138 0.063 PB L2
ENSG00000118503 TNFAIP3 -454794 sc-eQTL 9.32e-01 0.0142 0.167 0.063 PB L2
ENSG00000197442 MAP3K5 619943 sc-eQTL 9.24e-01 0.0183 0.19 0.063 PB L2
ENSG00000237499 WAKMAR2 -455813 sc-eQTL 4.41e-01 -0.155 0.2 0.063 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000197442 MAP3K5 619943 eQTL 0.0233 0.0671 0.0295 0.0 0.0 0.0447
ENSG00000220412 AL356234.1 -294781 eQTL 0.00267 0.174 0.0576 0.00603 0.00205 0.0447

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000237499 \N -455813 1.28e-06 9.39e-07 1.63e-07 1.21e-06 9.16e-08 4.77e-07 1.26e-06 2.04e-07 1.11e-06 3.76e-07 1.39e-06 6.08e-07 2.01e-06 2.78e-07 4.6e-07 5.69e-07 7.76e-07 5.66e-07 3.77e-07 3.11e-07 2.43e-07 9.64e-07 5.66e-07 1.76e-07 2.1e-06 2.8e-07 6.13e-07 4.94e-07 8e-07 1.01e-06 4.65e-07 6.42e-08 8.37e-08 6.38e-07 5.82e-07 2.78e-07 3.79e-07 6.97e-08 2.21e-07 3.23e-07 1.21e-07 1.6e-06 7.6e-08 1.89e-07 7.93e-08 8.9e-08 1.17e-07 8.16e-08 4.74e-08