Genes within 1Mb (chr12:112114470:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 272242 eQTL 1.21e-06 -0.0769 0.0157 0.00178 0.0 0.355
ENSG00000089169 RPH3A -455910 eQTL 8.49e-14 -0.234 0.0309 0.0 0.0 0.355
ENSG00000089234 BRAP 428514 pQTL 5.33e-04 -0.0543 0.0156 0.00432 0.004 0.349
ENSG00000111275 ALDH2 347583 pQTL 2.67e-24 -0.277 0.0267 0.0 0.0 0.349
ENSG00000111275 ALDH2 347583 eQTL 1.88e-05 -0.0761 0.0177 0.0 0.0 0.355
ENSG00000111300 NAA25 5674 eQTL 4.66e-08 -0.0695 0.0126 0.0 0.0 0.355
ENSG00000111335 OAS2 -863925 eQTL 9.51e-03 0.0319 0.0123 0.0 0.0 0.355
ENSG00000173064 HECTD4 -267969 eQTL 4.03e-32 0.173 0.0142 0.0 0.0 0.355
ENSG00000179295 PTPN11 -303881 eQTL 3.16e-05 -0.0629 0.015 0.0 0.0 0.355
ENSG00000198324 PHETA1 745349 eQTL 6.33e-13 0.144 0.0198 0.0 0.00124 0.355
ENSG00000204842 ATXN2 514794 eQTL 4.45e-05 0.0582 0.0142 0.0 0.0 0.355
ENSG00000213152 RPL7AP60 -188193 eQTL 2.00e-02 -0.0927 0.0398 0.0 0.0 0.355
ENSG00000234608 MAPKAPK5-AS1 271568 eQTL 5.18e-06 -0.0632 0.0138 0.0 0.0 0.355
ENSG00000257595 LINC02356 745188 eQTL 1.45e-02 0.0843 0.0344 0.0 0.0 0.355
ENSG00000258359 PCNPP1 444108 eQTL 6.51e-05 -0.145 0.0362 0.00475 0.0063 0.355


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 272242 1.29e-06 9.53e-07 3.45e-07 7.55e-07 3.46e-07 5.09e-07 1.58e-06 3.34e-07 1.32e-06 4.36e-07 1.52e-06 6.16e-07 2.01e-06 2.76e-07 5.79e-07 8.27e-07 8.37e-07 6.45e-07 7.52e-07 6.96e-07 5.66e-07 1.35e-06 8.84e-07 6.54e-07 2.26e-06 3.91e-07 7.6e-07 7.27e-07 1.31e-06 1.34e-06 6.18e-07 1.72e-07 2.19e-07 7.03e-07 5.41e-07 4.47e-07 5.15e-07 2.38e-07 3.87e-07 2.45e-07 2.92e-07 1.49e-06 5.85e-08 1.06e-07 1.69e-07 1.23e-07 2.42e-07 5.39e-08 1.09e-07
ENSG00000089169 RPH3A -455910 7.87e-07 4.93e-07 9.89e-08 3.48e-07 9.33e-08 1.97e-07 5.2e-07 1.03e-07 3.62e-07 2.16e-07 5.29e-07 3.3e-07 6.47e-07 1.1e-07 1.68e-07 1.96e-07 2.34e-07 3.79e-07 1.89e-07 1.31e-07 1.91e-07 3.34e-07 3.08e-07 1.34e-07 6.87e-07 2.46e-07 2.52e-07 2.24e-07 3.58e-07 5.28e-07 2.54e-07 5.62e-08 4.74e-08 1.36e-07 3e-07 6.73e-08 1.05e-07 8.15e-08 4e-08 5.32e-08 8.35e-08 4.16e-07 2.75e-08 5.71e-09 1.26e-07 1.25e-08 1.11e-07 1.26e-08 5.43e-08
ENSG00000111275 ALDH2 347583 1.26e-06 8.97e-07 2.1e-07 3.71e-07 1.78e-07 3.22e-07 7.53e-07 2.62e-07 8.36e-07 2.72e-07 1.07e-06 5.39e-07 1.3e-06 2.1e-07 3.9e-07 4.19e-07 6.83e-07 5.05e-07 3.74e-07 3.09e-07 2.62e-07 6.2e-07 5.87e-07 3.62e-07 1.54e-06 2.34e-07 4.97e-07 4.4e-07 7.07e-07 9.2e-07 4.48e-07 4.53e-08 1.31e-07 2.77e-07 3.29e-07 2.13e-07 1.93e-07 1.38e-07 1.23e-07 1.83e-08 1.85e-07 9.5e-07 6.44e-08 3.4e-08 1.81e-07 5.38e-08 1.82e-07 8.57e-08 5.32e-08
ENSG00000111300 NAA25 5674 2.62e-05 2.58e-05 5.66e-06 1.39e-05 5.01e-06 1.32e-05 3.81e-05 3.66e-06 2.44e-05 1.23e-05 3.08e-05 1.29e-05 4.23e-05 1.13e-05 6.27e-06 1.5e-05 1.38e-05 2.07e-05 7.62e-06 6.38e-06 1.27e-05 2.7e-05 2.59e-05 9.41e-06 3.77e-05 6.66e-06 1.09e-05 1.04e-05 2.85e-05 3.06e-05 1.55e-05 1.64e-06 2.68e-06 7.37e-06 1.05e-05 5.78e-06 3.39e-06 3.18e-06 5.03e-06 3.6e-06 1.7e-06 3.06e-05 2.86e-06 4.38e-07 2.32e-06 3.51e-06 3.77e-06 1.58e-06 1.57e-06
ENSG00000173064 HECTD4 -267969 1.23e-06 9.34e-07 3.41e-07 9.2e-07 3.36e-07 5.4e-07 1.63e-06 3.51e-07 1.41e-06 4.44e-07 1.65e-06 6.31e-07 2.02e-06 3.03e-07 5.72e-07 7.95e-07 8.42e-07 6.56e-07 7.7e-07 6.84e-07 6.12e-07 1.38e-06 8.53e-07 6.4e-07 2.3e-06 4.32e-07 7.97e-07 7.16e-07 1.43e-06 1.29e-06 6.52e-07 1.85e-07 1.99e-07 7.03e-07 5.63e-07 4.66e-07 5.22e-07 2.21e-07 3.93e-07 2.5e-07 2.82e-07 1.47e-06 5.94e-08 1.3e-07 2.1e-07 1.25e-07 2.36e-07 3.68e-08 1.11e-07
ENSG00000198324 PHETA1 745349 2.95e-07 1.33e-07 5.91e-08 2.05e-07 9.94e-08 8.45e-08 1.9e-07 5.75e-08 1.5e-07 7.6e-08 1.59e-07 1.15e-07 1.87e-07 7.95e-08 5.94e-08 7.97e-08 4.31e-08 1.64e-07 7.18e-08 5.07e-08 1.22e-07 1.39e-07 1.58e-07 3.07e-08 1.85e-07 1.23e-07 1.17e-07 1.06e-07 1.31e-07 1.06e-07 1.06e-07 3.68e-08 3.29e-08 9.3e-08 2.97e-08 3.05e-08 5.58e-08 8.57e-08 6.42e-08 4.41e-08 5.53e-08 1.46e-07 5.27e-08 7.2e-09 3.55e-08 1.55e-08 8.46e-08 2.05e-09 4.85e-08
ENSG00000204842 ATXN2 514794 5.74e-07 2.88e-07 8.67e-08 2.62e-07 1.07e-07 1.54e-07 4.05e-07 7.79e-08 2.56e-07 1.65e-07 3.47e-07 2.22e-07 4.54e-07 9.18e-08 1.18e-07 1.39e-07 1.18e-07 2.96e-07 1.36e-07 7.84e-08 1.65e-07 2.48e-07 2.56e-07 9.63e-08 4.46e-07 2.01e-07 1.78e-07 1.77e-07 2.19e-07 3.15e-07 1.93e-07 7.71e-08 5.86e-08 1.18e-07 1.67e-07 5.05e-08 6.95e-08 6.97e-08 5.98e-08 7.67e-08 4.32e-08 2.74e-07 2.62e-08 2.02e-08 9.79e-08 1.35e-08 9.68e-08 3.25e-09 5.52e-08
ENSG00000234608 MAPKAPK5-AS1 271568 1.32e-06 9.53e-07 3.58e-07 7.82e-07 3.46e-07 5.09e-07 1.59e-06 3.37e-07 1.32e-06 4.36e-07 1.56e-06 6.2e-07 2.01e-06 2.88e-07 5.79e-07 8.27e-07 8.37e-07 6.45e-07 7.52e-07 6.99e-07 5.66e-07 1.35e-06 8.84e-07 6.57e-07 2.26e-06 3.91e-07 7.6e-07 7.14e-07 1.31e-06 1.31e-06 6.18e-07 1.72e-07 2.08e-07 7.03e-07 5.32e-07 4.47e-07 5.17e-07 2.38e-07 3.89e-07 2.46e-07 2.93e-07 1.52e-06 5.85e-08 1.06e-07 1.79e-07 1.23e-07 2.33e-07 5.39e-08 1.09e-07
ENSG00000258359 PCNPP1 444108 8.43e-07 4.97e-07 1.04e-07 3.58e-07 1.05e-07 2.09e-07 5.31e-07 1.11e-07 3.82e-07 2.34e-07 5.93e-07 3.48e-07 7.02e-07 1.23e-07 1.9e-07 2.08e-07 2.77e-07 3.82e-07 2.12e-07 1.32e-07 1.92e-07 3.65e-07 3.45e-07 1.61e-07 7.72e-07 2.42e-07 2.52e-07 2.54e-07 3.83e-07 5.82e-07 2.73e-07 6.56e-08 4.49e-08 1.4e-07 3.03e-07 7.56e-08 1.1e-07 9.58e-08 6.38e-08 3.09e-08 8.75e-08 4.55e-07 2.88e-08 5.83e-09 1.41e-07 1.31e-08 1.01e-07 1.79e-08 4.71e-08