Genes within 1Mb (chr12:112680092:G:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 837864 eQTL 1.05e-03 -0.0601 0.0183 0.0 0.0 0.221
ENSG00000089169 RPH3A 109712 eQTL 1.49e-30 -0.408 0.0343 0.0 0.0 0.221
ENSG00000089234 BRAP 994136 pQTL 4.08e-05 -0.0751 0.0183 0.051 0.0381 0.214
ENSG00000111275 ALDH2 913205 pQTL 5.07e-39 -0.411 0.0304 0.0 0.0 0.214
ENSG00000111275 ALDH2 913205 eQTL 2.38e-09 -0.122 0.0203 0.0 0.0 0.221
ENSG00000111300 NAA25 571296 eQTL 7.14e-04 -0.0499 0.0147 0.0 0.0 0.221
ENSG00000111335 OAS2 -298303 eQTL 1.02e-03 0.0467 0.0142 0.0 0.0 0.221
ENSG00000139405 RITA1 -505434 eQTL 7.70e-03 0.0635 0.0238 0.0 0.0 0.221
ENSG00000173064 HECTD4 297653 eQTL 9.91e-13 0.124 0.0171 0.0 0.0 0.221
ENSG00000179295 PTPN11 261741 eQTL 5.48e-03 -0.0486 0.0174 0.0 0.0 0.221
ENSG00000213152 RPL7AP60 377429 eQTL 2.60e-02 -0.102 0.0459 0.0 0.0 0.221
ENSG00000234608 MAPKAPK5-AS1 837190 eQTL 9.69e-03 -0.0416 0.016 0.0 0.0 0.221


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 837864 2.95e-07 1.36e-07 5.93e-08 1.97e-07 9.94e-08 8.33e-08 1.81e-07 5.56e-08 1.54e-07 7.6e-08 1.62e-07 1.2e-07 1.87e-07 7.95e-08 5.69e-08 7.98e-08 4.45e-08 1.64e-07 7.12e-08 5.07e-08 1.27e-07 1.39e-07 1.58e-07 3.22e-08 1.72e-07 1.31e-07 1.17e-07 1.12e-07 1.31e-07 1.05e-07 1.06e-07 3.55e-08 3.13e-08 9.3e-08 3.4e-08 3.07e-08 5.8e-08 8.68e-08 6.58e-08 3.67e-08 5.48e-08 1.46e-07 5.12e-08 1.86e-08 3.2e-08 1.65e-08 9.96e-08 1.91e-09 4.81e-08
ENSG00000089169 RPH3A 109712 4.99e-06 5.1e-06 6.5e-07 3.42e-06 1.82e-06 1.53e-06 7.3e-06 1.28e-06 4.5e-06 3.05e-06 6.97e-06 2.97e-06 9.25e-06 1.77e-06 1e-06 4.12e-06 2.6e-06 3.81e-06 1.87e-06 1.98e-06 2.92e-06 5.98e-06 4.8e-06 1.91e-06 8.49e-06 2.26e-06 2.89e-06 1.9e-06 6.12e-06 6.32e-06 2.62e-06 5.42e-07 7.68e-07 2.63e-06 1.89e-06 1.71e-06 1.27e-06 5.57e-07 1.4e-06 8.61e-07 1.03e-06 7.04e-06 6.3e-07 1.79e-07 6.91e-07 9.83e-07 1.05e-06 6.73e-07 5.77e-07
ENSG00000111275 ALDH2 913205 2.8e-07 1.34e-07 5.49e-08 1.82e-07 1.03e-07 9.48e-08 1.67e-07 5.66e-08 1.5e-07 6.4e-08 1.63e-07 1.11e-07 1.59e-07 7.37e-08 5.98e-08 7.74e-08 4.24e-08 1.51e-07 6.32e-08 4.89e-08 1.26e-07 1.25e-07 1.44e-07 2.87e-08 1.63e-07 1.22e-07 1.18e-07 1.01e-07 1.22e-07 9.49e-08 1.06e-07 2.99e-08 3.43e-08 8.72e-08 4.84e-08 2.99e-08 5.22e-08 8.71e-08 6.86e-08 4.55e-08 5.3e-08 1.46e-07 5.21e-08 1.18e-08 3.42e-08 1.89e-08 1.21e-07 1.88e-09 5e-08
ENSG00000111300 NAA25 571296 6.09e-07 2.88e-07 8.99e-08 2.61e-07 1.06e-07 1.44e-07 4.05e-07 9.69e-08 2.81e-07 1.89e-07 3.97e-07 2.8e-07 4.88e-07 9.48e-08 1.45e-07 1.76e-07 1.38e-07 3.3e-07 1.5e-07 8.25e-08 1.61e-07 2.7e-07 2.63e-07 1.13e-07 4.46e-07 2.33e-07 1.87e-07 1.97e-07 2.4e-07 2.75e-07 1.93e-07 8.48e-08 6.08e-08 1.21e-07 1.76e-07 6.85e-08 6.95e-08 6.2e-08 5.4e-08 6.07e-08 5.19e-08 2.8e-07 2.94e-08 1.14e-08 8.68e-08 1.32e-08 9.52e-08 2.8e-09 5.61e-08
ENSG00000139405 RITA1 -505434 8.43e-07 4.93e-07 1.11e-07 3.58e-07 1.18e-07 1.77e-07 5.2e-07 1.48e-07 4.43e-07 2.37e-07 6.39e-07 3.62e-07 7.02e-07 1.17e-07 2.26e-07 2.45e-07 2.98e-07 3.95e-07 1.97e-07 1.55e-07 2.01e-07 3.87e-07 3.3e-07 1.71e-07 6.87e-07 2.54e-07 2.62e-07 2.63e-07 3.83e-07 4.72e-07 2.73e-07 6.42e-08 4.55e-08 1.42e-07 3.05e-07 1.09e-07 1.15e-07 8.33e-08 4e-08 2.56e-08 9.77e-08 4.42e-07 2.75e-08 1.75e-08 1.29e-07 1.25e-08 1.11e-07 1.13e-08 5.93e-08
ENSG00000173064 HECTD4 297653 1.28e-06 1.01e-06 2.43e-07 1e-06 3.68e-07 5.96e-07 1.58e-06 4.11e-07 1.43e-06 5.99e-07 1.89e-06 7.85e-07 2.29e-06 2.87e-07 5.01e-07 9.92e-07 9.23e-07 9.1e-07 8.15e-07 5.17e-07 8.02e-07 1.69e-06 8.94e-07 5.58e-07 2.23e-06 7.37e-07 9.45e-07 9.25e-07 1.48e-06 1.25e-06 7.26e-07 3.03e-07 2.85e-07 6.29e-07 5.28e-07 4.91e-07 6.81e-07 2.42e-07 4.8e-07 3.02e-07 2.58e-07 1.56e-06 1.1e-07 6.46e-08 2.84e-07 1.71e-07 2.38e-07 4.79e-08 1.9e-07