Genes within 1Mb (chr12:112127503:C:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 285275 eQTL 1.10e-90 -0.333 0.0147 0.00133 0.00561 0.2
ENSG00000089169 RPH3A -442877 eQTL 2.41e-03 -0.111 0.0363 0.0 0.0 0.2
ENSG00000089234 BRAP 441547 pQTL 3.69e-02 -0.0371 0.0177 0.0 0.0 0.201
ENSG00000089248 ERP29 114155 eQTL 2.33e-09 -0.0945 0.0157 0.00248 0.00243 0.2
ENSG00000111252 SH2B3 721555 pQTL 2.76e-05 -0.0734 0.0174 0.0 0.0 0.201
ENSG00000111275 ALDH2 360616 pQTL 9.25e-05 -0.122 0.0312 0.0 0.0 0.201
ENSG00000111300 NAA25 18707 eQTL 6.40e-01 0.00687 0.0147 0.00103 0.0 0.2
ENSG00000135144 DTX1 -929206 eQTL 1.44e-02 0.0488 0.0199 0.0 0.0 0.2
ENSG00000173064 HECTD4 -254936 eQTL 1.28e-52 0.251 0.0154 0.0 0.00254 0.2
ENSG00000198270 TMEM116 114318 eQTL 4.11e-20 0.191 0.0203 0.00801 0.00801 0.2
ENSG00000198324 PHETA1 758382 eQTL 3.89e-16 0.186 0.0225 0.0 0.0 0.2
ENSG00000204842 ATXN2 527827 eQTL 2.90e-02 0.0358 0.0164 0.0 0.0 0.2
ENSG00000213152 RPL7AP60 -175160 eQTL 1.54e-03 -0.144 0.0455 0.0 0.0 0.2
ENSG00000234608 MAPKAPK5-AS1 284601 eQTL 7.21e-01 -0.00571 0.016 0.00197 0.0 0.2
ENSG00000257595 LINC02356 758221 eQTL 1.25e-03 0.127 0.0393 0.0 0.0 0.2
ENSG00000274227 AC073575.2 108073 eQTL 3.05e-02 -0.101 0.0465 0.00142 0.0 0.2


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 285275 4.35e-06 7.64e-06 7.41e-07 3.69e-06 2.19e-06 1.52e-06 5.11e-06 1.79e-06 5.5e-06 3.58e-06 8.28e-06 2.98e-06 9.42e-06 1.98e-06 9.73e-07 4.76e-06 3.72e-06 3.76e-06 1.44e-06 2.57e-06 4.72e-06 7.56e-06 4.62e-06 1.81e-06 7.97e-06 2.37e-06 3.51e-06 3.75e-06 4.41e-06 4.04e-06 3.25e-06 1.25e-06 6.91e-07 2.22e-06 1.95e-06 2.09e-06 1.75e-06 1.66e-06 8.67e-07 8.61e-07 7.51e-07 6.25e-06 8.46e-07 2.73e-07 7.16e-07 1.62e-06 1.21e-06 9.75e-07 4.62e-07
ENSG00000089248 ERP29 114155 1.98e-05 3.42e-05 5.8e-06 1.61e-05 7.03e-06 1.48e-05 3.71e-05 7.64e-06 3.88e-05 1.89e-05 4.36e-05 2.1e-05 5.21e-05 1.3e-05 6.84e-06 2.5e-05 1.63e-05 2.83e-05 7.83e-06 8.77e-06 2.01e-05 3.73e-05 2.92e-05 8.82e-06 4.56e-05 1.12e-05 1.97e-05 1.88e-05 3.15e-05 1.58e-05 2.07e-05 3.18e-06 4.01e-06 8.17e-06 1.27e-05 7.56e-06 4.28e-06 3.82e-06 5.03e-06 3.95e-06 1.92e-06 3.49e-05 3.25e-06 5.95e-07 3.2e-06 5.79e-06 5.39e-06 3.47e-06 1.95e-06
ENSG00000173064 HECTD4 -254936 4.58e-06 9.28e-06 1.3e-06 4.4e-06 2.52e-06 3.09e-06 8.03e-06 2.08e-06 8.38e-06 4.76e-06 1.05e-05 4.69e-06 1.13e-05 3.23e-06 1.66e-06 6.38e-06 3.77e-06 5.1e-06 2.19e-06 2.83e-06 6.01e-06 8.11e-06 5.5e-06 2.06e-06 9.63e-06 3.33e-06 4.6e-06 4.97e-06 6.35e-06 4.67e-06 4.24e-06 1.61e-06 1.29e-06 2.77e-06 3.01e-06 2.59e-06 1.82e-06 1.82e-06 1.37e-06 1e-06 1.02e-06 8.33e-06 1.31e-06 3.6e-07 7.68e-07 1.75e-06 1.8e-06 1.38e-06 4.9e-07
ENSG00000198270 TMEM116 114318 1.98e-05 3.42e-05 5.8e-06 1.61e-05 7.03e-06 1.48e-05 3.71e-05 7.64e-06 3.88e-05 1.89e-05 4.33e-05 2.1e-05 5.21e-05 1.3e-05 6.84e-06 2.5e-05 1.63e-05 2.83e-05 7.83e-06 8.77e-06 2.01e-05 3.73e-05 2.92e-05 8.82e-06 4.56e-05 1.12e-05 1.97e-05 1.88e-05 3.15e-05 1.58e-05 2.07e-05 3.18e-06 4.01e-06 8.17e-06 1.27e-05 7.51e-06 4.28e-06 3.82e-06 5.03e-06 3.94e-06 1.91e-06 3.45e-05 3.25e-06 5.95e-07 3.2e-06 5.79e-06 5.31e-06 3.47e-06 1.95e-06
ENSG00000198324 PHETA1 758382 6.97e-07 8.47e-07 1.46e-07 3.81e-07 2.46e-07 3.32e-07 5.65e-07 2.47e-07 7.56e-07 3.22e-07 1.07e-06 4.62e-07 1.03e-06 1.84e-07 3.1e-07 3.57e-07 7.79e-07 4.16e-07 2.65e-07 3.11e-07 3.8e-07 5.36e-07 3.87e-07 1.73e-07 9.71e-07 2.44e-07 4.37e-07 5.8e-07 3.83e-07 5.56e-07 3.95e-07 2.56e-07 5.82e-08 1.79e-07 3.6e-07 3.22e-07 4.12e-07 1.59e-07 4e-08 2.28e-08 8.09e-08 5.87e-07 6.68e-08 8.98e-08 1.93e-07 1e-07 1.45e-07 3.68e-08 5.47e-08
ENSG00000213152 RPL7AP60 -175160 9.28e-06 1.66e-05 2.52e-06 9.8e-06 3.55e-06 6.19e-06 1.5e-05 4.5e-06 1.78e-05 8.98e-06 2.06e-05 8.18e-06 2.52e-05 5.15e-06 4.38e-06 1.06e-05 8.09e-06 1.32e-05 3.58e-06 4.92e-06 9.54e-06 1.67e-05 1.29e-05 4.56e-06 2.31e-05 5.52e-06 8.26e-06 9.69e-06 1.46e-05 8.22e-06 1.05e-05 1.8e-06 1.87e-06 4.4e-06 6.76e-06 4.51e-06 2.77e-06 2.77e-06 2.59e-06 2.66e-06 1.67e-06 1.69e-05 2.39e-06 4.6e-07 2.12e-06 3.36e-06 3.43e-06 2.22e-06 1.59e-06
ENSG00000229186 \N 228240 5.62e-06 1.02e-05 1.26e-06 6.07e-06 2.32e-06 4.18e-06 9.59e-06 2.74e-06 1.03e-05 5.32e-06 1.24e-05 5.63e-06 1.35e-05 3.97e-06 2.49e-06 6.73e-06 4.97e-06 7.6e-06 2.53e-06 3.12e-06 6.48e-06 1.03e-05 6.98e-06 3.17e-06 1.26e-05 4.36e-06 5.93e-06 6.04e-06 7.85e-06 6.57e-06 5.46e-06 1.58e-06 1.21e-06 3.24e-06 4.34e-06 2.85e-06 1.7e-06 2.03e-06 1.59e-06 1.1e-06 9.49e-07 1.01e-05 1.49e-06 3.99e-07 1.03e-06 2.34e-06 2.04e-06 1.49e-06 8.91e-07