Genes within 1Mb (chr12:111482425:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 -359803 eQTL 1.27e-18 0.239 0.0266 0.0 0.0 0.0756
ENSG00000089248 ERP29 -530923 eQTL 1.16e-03 0.0784 0.0241 0.0 0.0 0.0756
ENSG00000111249 CUX2 448260 eQTL 3.00e-02 -0.101 0.0464 0.00164 0.0 0.0756
ENSG00000111252 SH2B3 76477 pQTL 4.07e-04 0.0923 0.026 0.0 0.0 0.0798
ENSG00000111275 ALDH2 -284462 pQTL 1.65e-02 0.112 0.0467 0.0 0.0 0.0798
ENSG00000111275 ALDH2 -284462 eQTL 2.06e-03 0.0955 0.0309 0.0 0.0 0.0756
ENSG00000122986 HVCN1 777475 eQTL 3.77e-02 0.0526 0.0253 0.00195 0.0 0.0756
ENSG00000173064 HECTD4 -900014 eQTL 4.62e-14 -0.197 0.0257 0.0 0.0 0.0756
ENSG00000198270 TMEM116 -530760 eQTL 1.33e-05 -0.14 0.0319 0.0 0.0 0.0756
ENSG00000198324 PHETA1 113304 eQTL 3.96e-10 -0.218 0.0345 0.0 0.0 0.0756
ENSG00000204842 ATXN2 -117251 eQTL 3.90e-02 -0.0513 0.0248 0.0 0.0 0.0756
ENSG00000257595 LINC02356 113143 eQTL 3.93e-02 -0.123 0.0598 0.0 0.0 0.0756


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 -359803 1.13e-06 8.5e-07 1.2e-07 3.81e-07 1.05e-07 3.2e-07 6.72e-07 1.73e-07 6.53e-07 2.87e-07 1.02e-06 4.62e-07 9.97e-07 1.72e-07 2.81e-07 2.84e-07 5.34e-07 4.22e-07 2.79e-07 2.02e-07 2.49e-07 5.18e-07 4.4e-07 2.7e-07 1.06e-06 2.68e-07 4e-07 3.24e-07 5.03e-07 7.42e-07 3.66e-07 4.99e-08 9.26e-08 1.52e-07 3.35e-07 1.82e-07 2.34e-07 1.15e-07 1.12e-07 1.57e-08 7.48e-08 7.22e-07 6.13e-08 4.18e-08 1.81e-07 2.71e-08 1.32e-07 3.21e-08 5.62e-08
ENSG00000089248 ERP29 -530923 3.53e-07 1.92e-07 6.28e-08 2.41e-07 1.05e-07 1.13e-07 2.74e-07 6.12e-08 1.85e-07 1.03e-07 1.86e-07 1.37e-07 2.45e-07 8.55e-08 5.62e-08 9.01e-08 5.42e-08 1.8e-07 7.27e-08 5.61e-08 1.27e-07 1.81e-07 1.73e-07 4.37e-08 2.28e-07 1.39e-07 1.29e-07 1.26e-07 1.37e-07 1.46e-07 1.26e-07 8.14e-08 4.87e-08 9.81e-08 3.97e-08 4.6e-08 6.77e-08 5.25e-08 4.74e-08 6.43e-08 5.94e-08 1.63e-07 2.8e-08 1.84e-08 3.66e-08 9.44e-09 7.83e-08 0.0 4.54e-08
ENSG00000111249 CUX2 448260 6.09e-07 4e-07 7.92e-08 3.58e-07 1.07e-07 1.71e-07 4.25e-07 7.98e-08 2.6e-07 1.5e-07 3.66e-07 2.22e-07 4.74e-07 1.01e-07 9.33e-08 1.33e-07 1.17e-07 2.87e-07 1.36e-07 7.84e-08 1.57e-07 2.51e-07 2.67e-07 1.03e-07 3.98e-07 1.9e-07 1.74e-07 1.69e-07 2.11e-07 2.89e-07 1.78e-07 6.92e-08 5.68e-08 1.01e-07 1.22e-07 6.52e-08 1.08e-07 7.53e-08 4.44e-08 7.55e-08 4.84e-08 3.26e-07 6.18e-08 5.77e-09 8.43e-08 1.32e-08 9.19e-08 3.09e-09 5.05e-08
ENSG00000111252 SH2B3 76477 8.84e-06 1.02e-05 1.3e-06 5e-06 2.04e-06 4.01e-06 1.02e-05 1.8e-06 8.59e-06 4.78e-06 1.15e-05 4.94e-06 1.35e-05 3.9e-06 2.01e-06 6.42e-06 3.7e-06 5.77e-06 2.56e-06 2.63e-06 4.48e-06 8.39e-06 6.85e-06 2.32e-06 1.29e-05 2.93e-06 4.8e-06 3.31e-06 8.33e-06 7.57e-06 4.81e-06 8.78e-07 9.16e-07 2.69e-06 3.53e-06 1.84e-06 1.35e-06 1.46e-06 1.59e-06 9.06e-07 7.37e-07 1.25e-05 1.42e-06 1.88e-07 6.87e-07 1.2e-06 9.05e-07 6.61e-07 5.76e-07
ENSG00000122986 HVCN1 777475 2.74e-07 1.3e-07 3.71e-08 1.81e-07 9.21e-08 9.76e-08 1.49e-07 5.37e-08 1.44e-07 4.74e-08 1.6e-07 8.36e-08 1.41e-07 6.56e-08 6e-08 7.17e-08 3.87e-08 1.18e-07 5.82e-08 4e-08 1.08e-07 1.27e-07 1.39e-07 3.49e-08 1.37e-07 1.16e-07 1.06e-07 9.36e-08 1.08e-07 1.07e-07 9.91e-08 3.54e-08 3.96e-08 8.49e-08 8.94e-08 3.49e-08 5.7e-08 8.71e-08 6.86e-08 3.98e-08 3.82e-08 1.33e-07 5.27e-08 7.61e-09 5.15e-08 1.83e-08 1.22e-07 3.8e-09 5.04e-08
ENSG00000173064 HECTD4 -900014 2.64e-07 1.11e-07 3.59e-08 1.82e-07 8.92e-08 9.61e-08 1.42e-07 5.33e-08 1.41e-07 4.4e-08 1.59e-07 7.75e-08 1.3e-07 6.21e-08 5.55e-08 7.5e-08 3.88e-08 1.14e-07 5.21e-08 4.21e-08 1.04e-07 1.27e-07 1.32e-07 4.16e-08 1.31e-07 1.19e-07 1.12e-07 9.15e-08 1.03e-07 1.11e-07 9.58e-08 3.66e-08 3.35e-08 8.82e-08 8.93e-08 3.93e-08 4.99e-08 9.25e-08 6.55e-08 3.18e-08 4.51e-08 1.35e-07 5.2e-08 1.09e-08 5.87e-08 1.66e-08 1.23e-07 3.92e-09 4.81e-08
ENSG00000196850 \N 899107 2.64e-07 1.11e-07 3.59e-08 1.82e-07 8.92e-08 9.61e-08 1.42e-07 5.33e-08 1.41e-07 4.4e-08 1.59e-07 7.75e-08 1.3e-07 6.21e-08 5.55e-08 7.5e-08 3.9e-08 1.14e-07 5.21e-08 4.21e-08 1.05e-07 1.27e-07 1.32e-07 4.16e-08 1.31e-07 1.19e-07 1.12e-07 9.15e-08 1.03e-07 1.11e-07 9.58e-08 3.66e-08 3.35e-08 8.82e-08 8.93e-08 3.93e-08 4.99e-08 9.25e-08 6.55e-08 3.18e-08 4.51e-08 1.35e-07 5.2e-08 1.09e-08 5.87e-08 1.66e-08 1.23e-07 3.92e-09 4.81e-08
ENSG00000198270 TMEM116 -530760 3.53e-07 1.92e-07 6.28e-08 2.41e-07 1.05e-07 1.13e-07 2.74e-07 6.12e-08 1.85e-07 1.03e-07 1.86e-07 1.37e-07 2.45e-07 8.55e-08 5.62e-08 9.01e-08 5.42e-08 1.8e-07 7.27e-08 5.61e-08 1.27e-07 1.81e-07 1.73e-07 4.37e-08 2.28e-07 1.39e-07 1.29e-07 1.26e-07 1.37e-07 1.46e-07 1.26e-07 8.14e-08 4.87e-08 9.81e-08 3.97e-08 4.6e-08 6.77e-08 5.25e-08 4.74e-08 6.43e-08 5.94e-08 1.63e-07 2.8e-08 1.84e-08 3.66e-08 9.44e-09 7.83e-08 0.0 4.54e-08
ENSG00000198324 PHETA1 113304 5.75e-06 7.73e-06 7.29e-07 3.36e-06 1.59e-06 1.52e-06 7.49e-06 1.19e-06 4.5e-06 2.76e-06 7.55e-06 3.27e-06 9.33e-06 1.91e-06 1.21e-06 3.99e-06 1.99e-06 3.99e-06 1.5e-06 1.18e-06 2.87e-06 5.54e-06 4.77e-06 1.35e-06 8.97e-06 1.9e-06 2.79e-06 1.84e-06 4.84e-06 4.34e-06 2.6e-06 4.61e-07 5.02e-07 1.48e-06 1.93e-06 1.02e-06 1e-06 4.72e-07 8.97e-07 5.21e-07 3.48e-07 8.22e-06 7.85e-07 1.61e-07 5.95e-07 1.14e-06 1.05e-06 5.21e-07 4.23e-07