Genes within 1Mb (chr12:111397741:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 -444487 eQTL 6.10e-15 -0.113 0.0142 0.0 0.0 0.429
ENSG00000111231 GPN3 928473 eQTL 1.37e-03 0.0676 0.0211 0.0 0.0 0.429
ENSG00000111249 CUX2 363576 eQTL 2.57e-03 0.0743 0.0246 0.00374 0.00211 0.429
ENSG00000111252 SH2B3 -8207 pQTL 1.03e-02 -0.0367 0.0143 0.0 0.0 0.431
ENSG00000111275 ALDH2 -369146 pQTL 4.72e-08 -0.139 0.0253 0.0 0.0 0.431
ENSG00000111275 ALDH2 -369146 eQTL 2.44e-03 -0.0498 0.0164 0.0 0.0 0.429
ENSG00000111300 NAA25 -711055 eQTL 1.00e-05 -0.0519 0.0117 0.0 0.0 0.429
ENSG00000151164 RAD9B 896086 eQTL 1.42e-01 -0.0553 0.0377 0.00103 0.0 0.429
ENSG00000173064 HECTD4 -984698 eQTL 4.65e-40 0.178 0.0128 0.0 0.0 0.429
ENSG00000198324 PHETA1 28620 eQTL 5.85e-20 0.168 0.0179 0.0 0.012 0.429
ENSG00000204842 ATXN2 -201935 eQTL 7.30e-07 0.065 0.013 0.0 0.0 0.429
ENSG00000213152 RPL7AP60 -904922 eQTL 3.12e-03 -0.108 0.0366 0.0 0.0 0.429
ENSG00000234608 MAPKAPK5-AS1 -445161 eQTL 5.46e-07 -0.064 0.0127 0.0 0.0 0.429
ENSG00000241680 RPL31P49 936753 eQTL 8.87e-02 -0.064 0.0376 0.00113 0.0 0.429
ENSG00000257595 LINC02356 28459 eQTL 4.51e-05 0.129 0.0315 0.0 0.0 0.429
ENSG00000258359 PCNPP1 -272621 eQTL 2.84e-03 -0.1 0.0335 0.0 0.0 0.429
ENSG00000278993 AC002350.1 896127 eQTL 9.49e-02 -0.0469 0.028 0.00113 0.0 0.429


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 -444487 9.47e-07 5.74e-07 1.05e-07 3.87e-07 9.29e-08 1.85e-07 5.54e-07 1.11e-07 4.3e-07 2.39e-07 7.32e-07 3.65e-07 8.34e-07 1.41e-07 2.07e-07 2.36e-07 2.53e-07 3.95e-07 1.89e-07 1.31e-07 1.92e-07 3.71e-07 3.84e-07 1.61e-07 8.99e-07 2.34e-07 2.56e-07 2.54e-07 3.88e-07 5.82e-07 3.32e-07 7.4e-08 6.08e-08 1.57e-07 3.36e-07 1.02e-07 1.15e-07 7.86e-08 4.55e-08 5.32e-08 5.56e-08 6.11e-07 2.67e-08 1.88e-08 1.25e-07 1.25e-08 7.36e-08 3.14e-09 5.52e-08
ENSG00000111231 GPN3 928473 2.67e-07 1.3e-07 4.48e-08 1.81e-07 9.25e-08 9.8e-08 1.53e-07 5.37e-08 1.45e-07 5.42e-08 1.55e-07 8.68e-08 1.52e-07 6.76e-08 6.02e-08 7.36e-08 3.87e-08 1.27e-07 5.82e-08 4.04e-08 1.13e-07 1.27e-07 1.45e-07 3.23e-08 1.55e-07 1.14e-07 1.07e-07 9.61e-08 1.12e-07 1.03e-07 1.02e-07 3.87e-08 3.3e-08 8e-08 7.02e-08 3.62e-08 5.11e-08 9.25e-08 6.54e-08 3.87e-08 4.36e-08 1.4e-07 5.08e-08 1.23e-08 4.7e-08 1.84e-08 1.21e-07 3.86e-09 4.81e-08
ENSG00000111249 CUX2 363576 1.22e-06 9.07e-07 1.57e-07 3.25e-07 1.07e-07 3.36e-07 7.22e-07 2.21e-07 8.36e-07 3.05e-07 1.13e-06 5.4e-07 1.35e-06 2.14e-07 3.61e-07 4.11e-07 6.07e-07 5.12e-07 3.06e-07 2.27e-07 2.26e-07 5.66e-07 5.81e-07 3.24e-07 1.59e-06 2.52e-07 4.83e-07 3.88e-07 6.85e-07 9.08e-07 4.61e-07 5.93e-08 5.3e-08 2.46e-07 3.26e-07 2.58e-07 1.83e-07 1.06e-07 8.24e-08 8.43e-09 1.14e-07 1.12e-06 5.78e-08 5.8e-09 1.91e-07 4.23e-08 1.28e-07 2.44e-08 6.15e-08
ENSG00000111300 NAA25 -711055 3.21e-07 1.51e-07 6.04e-08 2.22e-07 9.82e-08 8.45e-08 2.1e-07 5.85e-08 1.66e-07 8.53e-08 1.66e-07 1.22e-07 2.24e-07 8e-08 5.69e-08 8.08e-08 4.18e-08 1.77e-07 7.18e-08 4.95e-08 1.22e-07 1.47e-07 1.64e-07 3.4e-08 2.17e-07 1.26e-07 1.19e-07 1.12e-07 1.32e-07 1.1e-07 1.21e-07 3.39e-08 3.43e-08 9.8e-08 3.57e-08 2.74e-08 5.51e-08 9.03e-08 6.41e-08 3.99e-08 5.28e-08 1.6e-07 5.39e-08 7.35e-09 3.29e-08 1.55e-08 1e-07 1.9e-09 4.99e-08
ENSG00000173064 HECTD4 -984698 2.74e-07 1.3e-07 4.08e-08 1.82e-07 9.16e-08 9.65e-08 1.49e-07 5.2e-08 1.45e-07 4.94e-08 1.57e-07 8.55e-08 1.45e-07 6.56e-08 6.17e-08 7.3e-08 3.98e-08 1.26e-07 5.39e-08 4.45e-08 1.08e-07 1.28e-07 1.44e-07 3.42e-08 1.46e-07 1.14e-07 1.07e-07 9.57e-08 1.09e-07 1.07e-07 9.7e-08 3.89e-08 3.28e-08 8.34e-08 7.66e-08 3.95e-08 5.03e-08 9.22e-08 6.55e-08 3.77e-08 3.57e-08 1.36e-07 4.7e-08 1.45e-08 5.19e-08 1.99e-08 1.22e-07 3.92e-09 4.85e-08
ENSG00000198324 PHETA1 28620 1.18e-05 1.26e-05 2.47e-06 7.29e-06 2.34e-06 5.66e-06 1.51e-05 2.08e-06 1.07e-05 6.06e-06 1.58e-05 6.41e-06 2.18e-05 4.45e-06 3.87e-06 7.34e-06 6.8e-06 1.04e-05 3.6e-06 3.2e-06 6.47e-06 1.18e-05 1.2e-05 4.56e-06 2.14e-05 4.49e-06 6.57e-06 5.21e-06 1.41e-05 1.52e-05 7.65e-06 1.08e-06 1.43e-06 4.01e-06 5.44e-06 3.8e-06 1.78e-06 2.15e-06 2.7e-06 1.74e-06 1.3e-06 1.68e-05 1.6e-06 2.66e-07 1.05e-06 2.02e-06 1.94e-06 8.65e-07 5.67e-07
ENSG00000204842 ATXN2 -201935 2.11e-06 2.13e-06 2.16e-07 1.35e-06 5.1e-07 6.97e-07 1.31e-06 3.78e-07 1.75e-06 7.41e-07 1.81e-06 1.27e-06 2.9e-06 6.86e-07 3.66e-07 1.11e-06 1.07e-06 1.34e-06 5.52e-07 5.11e-07 6.18e-07 1.96e-06 1.79e-06 8.41e-07 2.65e-06 9.36e-07 9.86e-07 9.82e-07 1.65e-06 1.68e-06 7.39e-07 2.86e-07 3.23e-07 8.37e-07 8.33e-07 6.2e-07 6.85e-07 3.42e-07 4.94e-07 2.08e-07 3.55e-07 2.82e-06 3.43e-07 1.25e-07 4.11e-07 3.24e-07 2.9e-07 1.42e-07 1.92e-07
ENSG00000213152 RPL7AP60 -904922 2.76e-07 1.27e-07 4.69e-08 1.82e-07 9.25e-08 9.8e-08 1.61e-07 5.4e-08 1.45e-07 5.42e-08 1.52e-07 9e-08 1.53e-07 7.13e-08 6.04e-08 7.36e-08 3.93e-08 1.33e-07 5.75e-08 4.1e-08 1.19e-07 1.24e-07 1.45e-07 2.95e-08 1.55e-07 1.14e-07 1.07e-07 9.61e-08 1.16e-07 1.07e-07 1.02e-07 3.64e-08 3.16e-08 8.11e-08 6.34e-08 3.65e-08 4.95e-08 9.26e-08 6.55e-08 3.71e-08 5.14e-08 1.46e-07 5.27e-08 1.16e-08 4.67e-08 1.84e-08 1.19e-07 3.86e-09 4.79e-08
ENSG00000234608 MAPKAPK5-AS1 -445161 9.47e-07 5.74e-07 1.05e-07 3.87e-07 9.45e-08 1.85e-07 5.54e-07 1.11e-07 4.3e-07 2.39e-07 7.32e-07 3.65e-07 8.34e-07 1.41e-07 1.9e-07 2.36e-07 2.53e-07 3.95e-07 1.89e-07 1.31e-07 1.92e-07 3.71e-07 3.84e-07 1.58e-07 8.99e-07 2.39e-07 2.56e-07 2.54e-07 3.88e-07 5.82e-07 3.32e-07 8.32e-08 6.08e-08 1.57e-07 3.08e-07 1.02e-07 1.15e-07 7.75e-08 4.55e-08 5.32e-08 5.56e-08 6.11e-07 2.67e-08 1.88e-08 1.25e-07 1.25e-08 7.36e-08 3.14e-09 5.52e-08
ENSG00000257595 LINC02356 28459 1.18e-05 1.27e-05 2.44e-06 7.37e-06 2.36e-06 5.66e-06 1.53e-05 2.18e-06 1.07e-05 6.13e-06 1.58e-05 6.53e-06 2.21e-05 4.48e-06 3.88e-06 7.34e-06 6.86e-06 1.04e-05 3.6e-06 3.27e-06 6.48e-06 1.18e-05 1.2e-05 4.6e-06 2.14e-05 4.55e-06 6.59e-06 5.24e-06 1.42e-05 1.52e-05 7.65e-06 1.05e-06 1.44e-06 4.01e-06 5.44e-06 3.8e-06 1.77e-06 2.13e-06 2.7e-06 1.74e-06 1.3e-06 1.68e-05 1.61e-06 2.66e-07 1.03e-06 2.02e-06 1.93e-06 8.65e-07 5.41e-07