Genes within 1Mb (chr12:111393882:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 -448346 eQTL 1.96e-13 -0.106 0.0142 0.0 0.0 0.437
ENSG00000111231 GPN3 924614 eQTL 3.66e-04 0.075 0.021 0.0 0.0 0.437
ENSG00000111249 CUX2 359717 eQTL 2.02e-03 0.0758 0.0245 0.00396 0.00255 0.437
ENSG00000111252 SH2B3 -12066 pQTL 2.32e-03 -0.0434 0.0142 0.0 0.0 0.44
ENSG00000111275 ALDH2 -373005 pQTL 3.14e-08 -0.141 0.0252 0.0 0.0 0.44
ENSG00000111275 ALDH2 -373005 eQTL 2.68e-03 -0.0492 0.0163 0.0 0.0 0.437
ENSG00000111300 NAA25 -714914 eQTL 6.86e-07 -0.0581 0.0116 0.0 0.0 0.437
ENSG00000151164 RAD9B 892227 eQTL 9.33e-02 -0.063 0.0375 0.00123 0.0 0.437
ENSG00000173064 HECTD4 -988557 eQTL 6.98e-42 0.181 0.0127 0.0 0.0 0.437
ENSG00000198270 TMEM116 -619303 eQTL 4.37e-02 -0.0343 0.017 0.0 0.0 0.437
ENSG00000198324 PHETA1 24761 eQTL 4.45e-23 0.18 0.0177 0.0 0.0386 0.437
ENSG00000204842 ATXN2 -205794 eQTL 1.31e-06 0.0633 0.013 0.0 0.0 0.437
ENSG00000213152 RPL7AP60 -908781 eQTL 7.88e-04 -0.123 0.0364 0.0 0.0 0.437
ENSG00000234608 MAPKAPK5-AS1 -449020 eQTL 5.66e-08 -0.069 0.0126 0.0 0.0 0.437
ENSG00000241680 RPL31P49 932894 eQTL 5.87e-02 -0.0708 0.0374 0.00127 0.0 0.437
ENSG00000257595 LINC02356 24600 eQTL 2.81e-05 0.132 0.0314 0.0 0.0 0.437
ENSG00000258359 PCNPP1 -276480 eQTL 2.04e-03 -0.103 0.0333 0.0 0.0 0.437
ENSG00000278993 AC002350.1 892268 eQTL 7.29e-02 -0.0501 0.0279 0.00128 0.0 0.437


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 -448346 1.39e-06 7.58e-07 1.08e-07 4.08e-07 1.07e-07 4.23e-07 5.49e-07 6.2e-08 3.62e-07 1.65e-07 7.32e-07 3.61e-07 9.44e-07 1.54e-07 5.17e-07 2.14e-07 2.98e-07 5.2e-07 1.55e-07 8.25e-08 1.76e-07 4.66e-07 3.11e-07 4.15e-08 9.82e-07 2.55e-07 2.23e-07 2.65e-07 2.19e-07 6.19e-07 3.32e-07 3.96e-08 5.86e-08 1.24e-07 3.31e-07 4.6e-08 9.9e-08 7.51e-08 6.62e-08 8.61e-08 4.69e-08 7.36e-07 1.37e-07 1.07e-08 4.36e-08 1.81e-08 7.36e-08 1.96e-09 4.85e-08
ENSG00000111231 GPN3 924614 3.77e-07 1.3e-07 3.71e-08 1.86e-07 9.02e-08 9.05e-08 1.61e-07 5.35e-08 1.44e-07 4.4e-08 1.62e-07 8.36e-08 1.47e-07 6.76e-08 5.97e-08 7.37e-08 3.9e-08 1.51e-07 5.21e-08 4.03e-08 1.05e-07 1.27e-07 1.34e-07 4.67e-08 1.46e-07 1.16e-07 1.08e-07 9.57e-08 1.05e-07 1.07e-07 9.7e-08 3.52e-08 3.09e-08 8.82e-08 6.34e-08 3.87e-08 4.72e-08 9.25e-08 8.42e-08 3.01e-08 3.7e-08 1.35e-07 4.87e-08 1.23e-08 5.87e-08 1.83e-08 1.22e-07 4.41e-09 4.61e-08
ENSG00000111249 CUX2 359717 2.62e-06 9.55e-07 2.06e-07 3.77e-07 1.07e-07 6.17e-07 7.53e-07 9.69e-08 8.08e-07 2.88e-07 1.19e-06 5.69e-07 1.55e-06 2.68e-07 3.28e-07 4.79e-07 7.62e-07 6.91e-07 2.79e-07 1.97e-07 2.5e-07 9.57e-07 5.41e-07 1.21e-07 1.86e-06 2.8e-07 4.55e-07 4.77e-07 4.63e-07 9.58e-07 4.59e-07 3.08e-08 4.92e-08 1.73e-07 3.29e-07 8.17e-08 1.83e-07 6.89e-08 5.7e-08 2.56e-08 5.87e-08 1.48e-06 4.37e-07 1.29e-08 9.15e-08 3.92e-08 1.47e-07 0.0 5.02e-08
ENSG00000111300 NAA25 -714914 8.63e-07 1.56e-07 5.49e-08 2.22e-07 9.16e-08 1.13e-07 2.16e-07 5.19e-08 1.47e-07 5.42e-08 1.62e-07 1.11e-07 2.29e-07 8e-08 1.48e-07 7.74e-08 4.12e-08 2.56e-07 6.32e-08 4.23e-08 1.26e-07 1.47e-07 1.58e-07 4.05e-08 2.09e-07 1.22e-07 1.13e-07 1.06e-07 1.23e-07 1.06e-07 1.09e-07 3.88e-08 3.66e-08 8e-08 4.04e-08 3.94e-08 5.37e-08 9.65e-08 7.58e-08 3.87e-08 4.36e-08 1.55e-07 2.32e-08 1.43e-08 4.7e-08 1.8e-08 1.21e-07 4.09e-09 4.85e-08
ENSG00000173064 HECTD4 -988557 3.27e-07 1.19e-07 3.54e-08 1.8e-07 9.02e-08 9.91e-08 1.49e-07 5.35e-08 1.41e-07 4.38e-08 1.62e-07 7.78e-08 1.41e-07 6.56e-08 5.69e-08 7.17e-08 4.48e-08 1.4e-07 5.19e-08 4.03e-08 1.04e-07 1.27e-07 1.32e-07 4.82e-08 1.4e-07 1.14e-07 1.11e-07 9.32e-08 1.03e-07 1.1e-07 9.64e-08 3.59e-08 2.91e-08 8.68e-08 7.36e-08 3.9e-08 4.63e-08 9.35e-08 8.55e-08 3.05e-08 3.84e-08 1.35e-07 5.27e-08 1.66e-08 6.92e-08 1.83e-08 1.25e-07 4.5e-09 4.61e-08
ENSG00000198324 PHETA1 24761 0.000124 1.48e-05 2.5e-06 9.48e-06 2.98e-06 1.95e-05 2.03e-05 2.16e-06 1.32e-05 6.72e-06 1.87e-05 7.07e-06 2.57e-05 4.48e-06 5.1e-06 1.07e-05 7.29e-06 2.11e-05 2.89e-06 3.12e-06 7.08e-06 1.94e-05 1.39e-05 3.39e-06 2.45e-05 5.37e-06 7.94e-06 5.24e-06 1.45e-05 1.32e-05 9.27e-06 1.07e-06 1.1e-06 3.57e-06 6.46e-06 2.63e-06 1.79e-06 2.41e-06 2.16e-06 1.84e-06 1.05e-06 2.28e-05 3.63e-06 1.63e-07 9.22e-07 1.78e-06 3e-06 6.87e-07 5.98e-07
ENSG00000204842 ATXN2 -205794 8.29e-06 3.22e-06 2.51e-07 1.57e-06 4.74e-07 1.76e-06 1.3e-06 3.69e-07 1.78e-06 7.36e-07 1.96e-06 1.38e-06 3.44e-06 1.38e-06 1.43e-06 1.19e-06 1.09e-06 2.15e-06 7.08e-07 4.81e-07 7.69e-07 2.88e-06 1.64e-06 6.54e-07 3.4e-06 1.34e-06 1.12e-06 1.08e-06 1.6e-06 1.67e-06 1.21e-06 7.5e-08 3.25e-07 6.67e-07 8.68e-07 4.37e-07 7.24e-07 2.23e-07 2.21e-07 2.97e-07 1.17e-07 3.4e-06 8.3e-07 8.98e-08 1.85e-07 2.73e-07 4.12e-07 8.43e-08 5.16e-08
ENSG00000213152 RPL7AP60 -908781 4.21e-07 1.3e-07 3.69e-08 1.81e-07 8.92e-08 8.45e-08 1.61e-07 5.35e-08 1.44e-07 4.4e-08 1.62e-07 8.36e-08 1.52e-07 6.76e-08 6.12e-08 7.37e-08 3.9e-08 1.56e-07 5.36e-08 4.03e-08 1.05e-07 1.27e-07 1.34e-07 4.67e-08 1.5e-07 1.16e-07 1.08e-07 9.57e-08 1.05e-07 1.07e-07 9.7e-08 3.52e-08 3.09e-08 8.65e-08 5.64e-08 4.02e-08 4.89e-08 9.13e-08 8.3e-08 3e-08 3.7e-08 1.36e-07 4.7e-08 1.16e-08 5.87e-08 1.99e-08 1.23e-07 4.41e-09 4.61e-08
ENSG00000234608 MAPKAPK5-AS1 -449020 1.37e-06 7.56e-07 9.71e-08 4.04e-07 1.07e-07 4.12e-07 5.49e-07 6.2e-08 3.62e-07 1.65e-07 7.32e-07 3.61e-07 9.44e-07 1.54e-07 5.23e-07 2.14e-07 2.98e-07 5.26e-07 1.55e-07 8.25e-08 1.76e-07 4.66e-07 3.11e-07 4.15e-08 9.82e-07 2.55e-07 2.23e-07 2.65e-07 2.19e-07 6.19e-07 3.13e-07 3.96e-08 5.75e-08 1.24e-07 3.31e-07 4.6e-08 9.9e-08 7.51e-08 6.62e-08 8.61e-08 4.94e-08 7.2e-07 1.14e-07 1.07e-08 4.36e-08 1.81e-08 7.36e-08 1.96e-09 4.85e-08
ENSG00000257595 LINC02356 24600 0.000124 1.48e-05 2.5e-06 9.42e-06 2.98e-06 1.95e-05 2.04e-05 2.14e-06 1.35e-05 6.78e-06 1.88e-05 7.07e-06 2.62e-05 4.46e-06 5.1e-06 1.07e-05 7.38e-06 2.14e-05 2.93e-06 3.15e-06 7.08e-06 1.97e-05 1.4e-05 3.39e-06 2.46e-05 5.34e-06 7.94e-06 5.22e-06 1.45e-05 1.32e-05 9.4e-06 1.11e-06 1.1e-06 3.55e-06 6.46e-06 2.59e-06 1.79e-06 2.41e-06 2.19e-06 1.84e-06 1.05e-06 2.28e-05 3.63e-06 1.62e-07 9.19e-07 1.78e-06 3e-06 6.87e-07 5.97e-07