Genes within 1Mb (chr12:111389399:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 -452829 eQTL 1.01e-13 -0.107 0.0142 0.0 0.0 0.439
ENSG00000089248 ERP29 -623949 eQTL 4.72e-02 -0.0253 0.0128 0.0 0.0 0.439
ENSG00000111231 GPN3 920131 eQTL 3.88e-04 0.0746 0.021 0.0 0.0 0.439
ENSG00000111249 CUX2 355234 eQTL 1.69e-03 0.0771 0.0245 0.00436 0.00297 0.439
ENSG00000111252 SH2B3 -16549 pQTL 2.45e-03 -0.0431 0.0142 0.0 0.0 0.441
ENSG00000111275 ALDH2 -377488 pQTL 4.01e-08 -0.139 0.0252 0.0 0.0 0.441
ENSG00000111275 ALDH2 -377488 eQTL 2.95e-03 -0.0487 0.0163 0.0 0.0 0.439
ENSG00000111300 NAA25 -719397 eQTL 5.55e-07 -0.0585 0.0116 0.0 0.0 0.439
ENSG00000151164 RAD9B 887744 eQTL 9.15e-02 -0.0633 0.0375 0.00125 0.0 0.439
ENSG00000173064 HECTD4 -993040 eQTL 8.54e-42 0.181 0.0127 0.0 0.0 0.439
ENSG00000198270 TMEM116 -623786 eQTL 4.56e-02 -0.034 0.017 0.0 0.0 0.439
ENSG00000198324 PHETA1 20278 eQTL 7.17e-24 0.183 0.0177 0.0 0.0955 0.439
ENSG00000204842 ATXN2 -210277 eQTL 2.05e-06 0.0621 0.013 0.0 0.0 0.439
ENSG00000213152 RPL7AP60 -913264 eQTL 6.95e-04 -0.124 0.0364 0.0 0.0 0.439
ENSG00000234608 MAPKAPK5-AS1 -453503 eQTL 3.49e-08 -0.07 0.0126 0.0 0.0 0.439
ENSG00000241680 RPL31P49 928411 eQTL 6.03e-02 -0.0703 0.0374 0.00126 0.0 0.439
ENSG00000257595 LINC02356 20117 eQTL 2.70e-05 0.132 0.0314 0.0 0.0 0.439
ENSG00000258359 PCNPP1 -280963 eQTL 2.35e-03 -0.102 0.0333 0.0 0.0 0.439
ENSG00000278993 AC002350.1 887785 eQTL 6.84e-02 -0.0509 0.0279 0.00133 0.0 0.439


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 -452829 9.39e-07 9.44e-07 3.41e-07 1.16e-06 3.6e-07 3.3e-07 7.25e-07 2.68e-07 1.11e-06 3.99e-07 1.24e-06 5.97e-07 1.05e-06 3.03e-07 4.85e-07 7.3e-07 5.41e-07 5.65e-07 8.67e-07 6.91e-07 2.97e-07 8.11e-07 5.77e-07 6.51e-07 1.69e-06 4.36e-07 6.19e-07 5.44e-07 6.62e-07 1.08e-06 4.02e-07 4.03e-08 4.77e-08 5.21e-07 3.92e-07 3.21e-07 6.19e-07 1.09e-07 7.81e-08 2.99e-07 1.02e-07 7.53e-07 8.31e-08 1.49e-07 1.96e-07 1.01e-07 2.08e-07 7.19e-08 4.71e-08
ENSG00000111231 GPN3 920131 2.67e-07 1.35e-07 6.26e-08 2.27e-07 9.94e-08 9.9e-08 1.53e-07 5.4e-08 1.47e-07 6.4e-08 1.55e-07 1.05e-07 1.47e-07 8.13e-08 7.79e-08 7.89e-08 3.98e-08 1.44e-07 7.36e-08 4.95e-08 1.21e-07 1.24e-07 1.44e-07 2.83e-08 1.63e-07 1.39e-07 1.13e-07 1.01e-07 1.12e-07 1.05e-07 9.7e-08 3.87e-08 3.3e-08 9.76e-08 3.4e-08 3.2e-08 3.91e-08 9.68e-08 6.56e-08 7.65e-08 4.88e-08 1.35e-07 5.2e-08 5.77e-09 5.43e-08 1.65e-08 1.2e-07 3.8e-09 5.09e-08
ENSG00000111249 CUX2 355234 1.26e-06 1.25e-06 2.86e-07 1.62e-06 4.41e-07 5.83e-07 1.59e-06 3.99e-07 1.66e-06 7.25e-07 2.01e-06 1.26e-06 2e-06 8.94e-07 9.23e-07 9.61e-07 8.37e-07 1.06e-06 6.47e-07 6.08e-07 7.61e-07 1.82e-06 8.94e-07 8.39e-07 2.26e-06 9.3e-07 1.01e-06 8.98e-07 1.31e-06 1.3e-06 6.82e-07 2.24e-07 2.15e-07 5.59e-07 6.47e-07 4.89e-07 7.69e-07 1.92e-07 3.2e-07 3.52e-07 2.56e-07 1.49e-06 3.92e-07 1.99e-07 2.1e-07 3.19e-07 3.8e-07 3.8e-08 8.38e-08
ENSG00000111300 NAA25 -719397 2.77e-07 2.17e-07 8.67e-08 3.58e-07 1.1e-07 8.85e-08 2.24e-07 6.12e-08 2.01e-07 1.39e-07 2.04e-07 1.82e-07 2.29e-07 9.48e-08 2.77e-07 1.33e-07 4.18e-08 2.43e-07 1.77e-07 7.26e-08 1.33e-07 1.9e-07 1.68e-07 5.6e-08 2.74e-07 2.29e-07 1.31e-07 1.52e-07 1.37e-07 1.81e-07 1.21e-07 3.66e-08 3.68e-08 1.23e-07 1.27e-07 3.5e-08 9.9e-08 8.61e-08 6.3e-08 2.59e-08 5.77e-08 1.52e-07 3.4e-08 2.71e-08 3.29e-08 8.59e-09 8.93e-08 2.07e-09 5e-08
ENSG00000173064 HECTD4 -993040 2.64e-07 1.3e-07 5.64e-08 2.05e-07 1.03e-07 9.8e-08 1.44e-07 5.2e-08 1.45e-07 5.67e-08 1.62e-07 9e-08 1.41e-07 7.37e-08 6.12e-08 7.23e-08 3.9e-08 1.27e-07 7.18e-08 4.3e-08 1.13e-07 1.27e-07 1.34e-07 2.93e-08 1.46e-07 1.23e-07 1.07e-07 9.74e-08 1.08e-07 1.02e-07 9.91e-08 3.92e-08 3.26e-08 8.89e-08 5.64e-08 3.6e-08 5.58e-08 9.56e-08 7.47e-08 6.19e-08 3.92e-08 1.31e-07 5.08e-08 1.07e-08 5.87e-08 1.87e-08 1.21e-07 3.86e-09 4.79e-08
ENSG00000198324 PHETA1 20278 3.04e-05 2.99e-05 5.92e-06 1.55e-05 5.25e-06 1.29e-05 4.1e-05 4.28e-06 2.95e-05 1.4e-05 3.52e-05 1.63e-05 4.46e-05 1.35e-05 6.39e-06 1.67e-05 1.55e-05 2.37e-05 7.56e-06 6.57e-06 1.32e-05 2.86e-05 2.89e-05 8.47e-06 4.09e-05 7.48e-06 1.26e-05 1.15e-05 2.98e-05 2.25e-05 1.83e-05 1.62e-06 2.41e-06 6.8e-06 1.15e-05 5.22e-06 3.03e-06 3.14e-06 4.35e-06 3.19e-06 1.7e-06 3.56e-05 3.39e-06 3.62e-07 2.16e-06 3.59e-06 4.13e-06 1.49e-06 1.52e-06
ENSG00000204842 ATXN2 -210277 4.04e-06 4.77e-06 5.92e-07 3.67e-06 1.63e-06 1.53e-06 3.71e-06 9.96e-07 5.08e-06 2.81e-06 4.69e-06 3.36e-06 6.07e-06 2.07e-06 9.3e-07 3.84e-06 1.81e-06 3.51e-06 1.43e-06 1.4e-06 2.88e-06 4.48e-06 3.51e-06 1.81e-06 5.26e-06 1.96e-06 2.33e-06 1.73e-06 4.32e-06 4.04e-06 1.95e-06 3.85e-07 7.51e-07 1.49e-06 2e-06 9.97e-07 1.02e-06 4.58e-07 1.34e-06 8.28e-07 4.41e-07 5.03e-06 7.19e-07 1.65e-07 3.58e-07 1.14e-06 1.04e-06 3.79e-07 1.77e-07
ENSG00000213152 RPL7AP60 -913264 2.67e-07 1.36e-07 6.15e-08 2.24e-07 1.02e-07 9.91e-08 1.53e-07 5.43e-08 1.47e-07 6.75e-08 1.52e-07 1.08e-07 1.47e-07 8.13e-08 7.98e-08 7.98e-08 3.98e-08 1.44e-07 7.36e-08 4.95e-08 1.22e-07 1.26e-07 1.44e-07 2.83e-08 1.63e-07 1.39e-07 1.13e-07 1.04e-07 1.12e-07 1e-07 9.7e-08 3.87e-08 3.16e-08 9.76e-08 2.97e-08 3.04e-08 3.7e-08 9.68e-08 6.56e-08 7.78e-08 5.14e-08 1.33e-07 5.2e-08 5.83e-09 5.43e-08 1.65e-08 1.2e-07 3.79e-09 5.09e-08
ENSG00000234608 MAPKAPK5-AS1 -453503 9.39e-07 9.44e-07 3.41e-07 1.16e-06 3.57e-07 3.3e-07 7.25e-07 2.65e-07 1.11e-06 3.99e-07 1.22e-06 5.97e-07 1.05e-06 3.03e-07 4.96e-07 7.41e-07 5.41e-07 5.65e-07 8.61e-07 6.76e-07 2.93e-07 7.73e-07 5.63e-07 6.51e-07 1.69e-06 4.32e-07 6.19e-07 5.44e-07 6.62e-07 1.08e-06 4.02e-07 3.99e-08 5.37e-08 5.28e-07 3.92e-07 3.21e-07 6.17e-07 1.09e-07 7.81e-08 2.98e-07 1.01e-07 7.52e-07 8.31e-08 1.49e-07 1.96e-07 1e-07 2.08e-07 7.19e-08 4.97e-08
ENSG00000257595 LINC02356 20117 3.04e-05 3.01e-05 5.92e-06 1.55e-05 5.25e-06 1.31e-05 4.1e-05 4.37e-06 2.95e-05 1.4e-05 3.52e-05 1.65e-05 4.46e-05 1.35e-05 6.39e-06 1.67e-05 1.55e-05 2.37e-05 7.56e-06 6.57e-06 1.32e-05 2.86e-05 2.89e-05 8.47e-06 4.09e-05 7.48e-06 1.26e-05 1.15e-05 2.98e-05 2.25e-05 1.83e-05 1.62e-06 2.42e-06 6.8e-06 1.15e-05 5.22e-06 3.03e-06 3.14e-06 4.35e-06 3.19e-06 1.72e-06 3.56e-05 3.39e-06 3.62e-07 2.16e-06 3.59e-06 4.13e-06 1.49e-06 1.52e-06