Genes within 1Mb (chr12:111171923:G:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 -670305 eQTL 1.50e-04 -0.0664 0.0175 0.0 0.0 0.239
ENSG00000089234 BRAP -514033 pQTL 3.73e-03 -0.0509 0.0175 0.00123 0.0 0.232
ENSG00000089248 ERP29 -841425 pQTL 4.87e-02 0.0194 0.00981 0.0 0.0 0.232
ENSG00000089248 ERP29 -841425 eQTL 9.63e-02 0.0256 0.0153 0.00907 0.00265 0.239
ENSG00000111231 GPN3 702655 eQTL 2.11e-23 0.246 0.0241 0.0015 0.00191 0.239
ENSG00000111249 CUX2 137758 eQTL 2.30e-02 0.0671 0.0295 0.0017 0.0 0.239
ENSG00000111275 ALDH2 -594964 pQTL 6.14e-32 -0.356 0.0295 0.0 0.0 0.232
ENSG00000111275 ALDH2 -594964 eQTL 1.93e-08 -0.11 0.0194 0.0 0.0 0.239
ENSG00000111300 NAA25 -936873 eQTL 2.24e-03 -0.0431 0.0141 0.0 0.0 0.239
ENSG00000122986 HVCN1 466973 eQTL 6.26e-02 -0.03 0.0161 0.00112 0.0 0.239
ENSG00000198324 PHETA1 -197198 eQTL 2.81e-03 0.0668 0.0223 0.0 0.0 0.239
ENSG00000204842 ATXN2 -427753 eQTL 9.03e-03 0.0412 0.0157 0.0 0.0 0.239
ENSG00000204856 FAM216A 703142 eQTL 1.03e-02 0.0619 0.0241 0.0 0.0 0.239
ENSG00000258359 PCNPP1 -498439 eQTL 6.94e-04 -0.136 0.04 0.0 0.0 0.239


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 -670305 3.14e-07 1.5e-07 6.04e-08 2.07e-07 1.03e-07 8.63e-08 2.1e-07 5.85e-08 1.44e-07 7.6e-08 1.62e-07 1.23e-07 1.95e-07 8.13e-08 5.43e-08 7.89e-08 4.45e-08 1.72e-07 7.09e-08 5.33e-08 1.27e-07 1.39e-07 1.58e-07 3.4e-08 1.98e-07 1.23e-07 1.17e-07 1.04e-07 1.31e-07 1.1e-07 1.14e-07 3.68e-08 3.38e-08 9.52e-08 3.07e-08 3.22e-08 5.42e-08 8.89e-08 6.41e-08 4.24e-08 6.07e-08 1.5e-07 5.27e-08 7.78e-09 3.55e-08 1.71e-08 8.98e-08 2e-09 4.91e-08
ENSG00000111231 GPN3 702655 3.02e-07 1.33e-07 5.82e-08 2.05e-07 1.03e-07 8.45e-08 1.9e-07 5.75e-08 1.5e-07 6.75e-08 1.67e-07 1.2e-07 1.79e-07 7.95e-08 5.94e-08 7.97e-08 4.18e-08 1.56e-07 7.12e-08 4.95e-08 1.25e-07 1.31e-07 1.58e-07 2.68e-08 1.72e-07 1.22e-07 1.12e-07 1.06e-07 1.31e-07 1.06e-07 1.06e-07 3.72e-08 3.13e-08 8.7e-08 3.4e-08 3.05e-08 5.8e-08 8.68e-08 6.76e-08 3.99e-08 5.65e-08 1.46e-07 5.12e-08 1.24e-08 3.07e-08 1.65e-08 8.81e-08 1.95e-09 4.83e-08
ENSG00000111249 CUX2 137758 3.91e-06 3.66e-06 5.55e-07 1.94e-06 7.73e-07 8.3e-07 2.5e-06 8.93e-07 2.44e-06 1.4e-06 3.14e-06 1.95e-06 5e-06 1.17e-06 8.74e-07 2.02e-06 1.66e-06 2.13e-06 1.49e-06 1.2e-06 1.39e-06 3.33e-06 3.37e-06 1.64e-06 4.41e-06 1.24e-06 1.53e-06 1.7e-06 3.58e-06 3.11e-06 1.97e-06 4.69e-07 6.49e-07 1.55e-06 1.74e-06 9.67e-07 8.9e-07 4.49e-07 1.3e-06 3.46e-07 2.79e-07 4.1e-06 5.79e-07 1.6e-07 3.61e-07 3.59e-07 8.85e-07 2.35e-07 1.78e-07
ENSG00000111275 ALDH2 -594964 3.71e-07 1.67e-07 6.57e-08 2.31e-07 1.05e-07 9.31e-08 2.63e-07 6.12e-08 1.75e-07 1.05e-07 1.86e-07 1.59e-07 2.45e-07 8.44e-08 6.2e-08 9.6e-08 4.63e-08 2.15e-07 7.42e-08 6.02e-08 1.26e-07 1.76e-07 1.75e-07 4.17e-08 2.37e-07 1.43e-07 1.29e-07 1.28e-07 1.34e-07 1.46e-07 1.27e-07 4.51e-08 4.16e-08 9.3e-08 5.24e-08 3.11e-08 4.07e-08 7.63e-08 6.45e-08 6.55e-08 4.78e-08 1.6e-07 3.35e-08 1.43e-08 3.71e-08 6.68e-09 7.52e-08 2.23e-09 4.83e-08
ENSG00000111300 NAA25 -936873 2.74e-07 1.19e-07 4.08e-08 1.82e-07 9.16e-08 9.8e-08 1.49e-07 5.2e-08 1.44e-07 4.74e-08 1.62e-07 8.55e-08 1.41e-07 6.56e-08 6.17e-08 7.37e-08 3.98e-08 1.26e-07 5.82e-08 4e-08 1.04e-07 1.27e-07 1.39e-07 3.42e-08 1.37e-07 1.16e-07 1.06e-07 9.57e-08 1.08e-07 1.07e-07 9.64e-08 3.66e-08 3.56e-08 8.68e-08 8.38e-08 3.93e-08 5.02e-08 9.23e-08 6.56e-08 4.02e-08 5.13e-08 1.35e-07 4.89e-08 1.91e-08 4.92e-08 1.99e-08 1.21e-07 3.81e-09 4.9e-08
ENSG00000198324 PHETA1 -197198 1.93e-06 2.15e-06 2.54e-07 1.3e-06 4.7e-07 7.48e-07 1.3e-06 3.83e-07 1.73e-06 7.15e-07 1.94e-06 1.29e-06 2.69e-06 6.9e-07 3.31e-07 9.69e-07 1.1e-06 1.29e-06 5.56e-07 6.26e-07 6.12e-07 1.95e-06 1.64e-06 8.48e-07 2.51e-06 9.13e-07 1e-06 1.05e-06 1.73e-06 1.59e-06 7.32e-07 2.49e-07 3.7e-07 7.05e-07 8.31e-07 6.2e-07 6.72e-07 3.36e-07 5.97e-07 2.25e-07 2.88e-07 2.22e-06 3.59e-07 1.57e-07 3.97e-07 3.19e-07 3.8e-07 2.49e-07 2.82e-07