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Genes within 1Mb (chr6:136540261:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -679188 sc-eQTL 7.73e-01 -0.048 0.166 0.05 CD8_TEM L2
ENSG00000029363 BCLAF1 250410 sc-eQTL 7.47e-01 0.0506 0.157 0.05 CD8_TEM L2
ENSG00000112357 PEX7 -282303 sc-eQTL 2.65e-01 0.213 0.19 0.05 CD8_TEM L2
ENSG00000197442 MAP3K5 -252216 sc-eQTL 6.04e-01 -0.0983 0.189 0.05 CD8_TEM L2
ENSG00000027697 IFNGR1 -679188 sc-eQTL 8.27e-01 0.0326 0.149 0.05 Pro_T L2
ENSG00000029363 BCLAF1 250410 sc-eQTL 5.03e-01 0.104 0.155 0.05 Pro_T L2
ENSG00000112357 PEX7 -282303 sc-eQTL 5.39e-01 0.111 0.181 0.05 Pro_T L2
ENSG00000146410 MTFR2 289926 sc-eQTL 3.26e-02 -0.268 0.125 0.05 Pro_T L2
ENSG00000197442 MAP3K5 -252216 sc-eQTL 2.21e-01 -0.215 0.175 0.05 Pro_T L2
ENSG00000027697 IFNGR1 -679188 sc-eQTL 6.65e-01 -0.0774 0.178 0.061 gdT L2
ENSG00000029363 BCLAF1 250410 sc-eQTL 4.89e-01 0.109 0.157 0.061 gdT L2
ENSG00000112357 PEX7 -282303 sc-eQTL 6.68e-01 0.0971 0.226 0.061 gdT L2
ENSG00000146410 MTFR2 289926 sc-eQTL 8.21e-01 0.0393 0.173 0.061 gdT L2
ENSG00000197442 MAP3K5 -252216 sc-eQTL 9.63e-01 0.0107 0.232 0.061 gdT L2
ENSG00000027697 IFNGR1 -679188 sc-eQTL 8.60e-01 -0.0225 0.127 0.051 intMono L2
ENSG00000029363 BCLAF1 250410 sc-eQTL 4.81e-01 -0.118 0.168 0.051 intMono L2
ENSG00000112357 PEX7 -282303 sc-eQTL 1.39e-01 -0.253 0.17 0.051 intMono L2
ENSG00000135525 MAP7 -10558 sc-eQTL 4.46e-01 -0.129 0.168 0.051 intMono L2
ENSG00000171408 PDE7B 688560 sc-eQTL 6.78e-01 -0.0693 0.167 0.051 intMono L2
ENSG00000197442 MAP3K5 -252216 sc-eQTL 8.81e-01 -0.0268 0.179 0.051 intMono L2
ENSG00000286646 AL121933.2 -243784 sc-eQTL 1.06e-01 -0.304 0.187 0.051 intMono L2
ENSG00000027697 IFNGR1 -679188 sc-eQTL 1.04e-01 0.293 0.18 0.051 pDC L2
ENSG00000029363 BCLAF1 250410 sc-eQTL 7.05e-02 0.245 0.134 0.051 pDC L2
ENSG00000112357 PEX7 -282303 sc-eQTL 1.18e-01 -0.311 0.198 0.051 pDC L2
ENSG00000135525 MAP7 -10558 sc-eQTL 1.48e-01 -0.201 0.138 0.051 pDC L2
ENSG00000171408 PDE7B 688560 sc-eQTL 4.78e-01 0.134 0.189 0.051 pDC L2
ENSG00000197442 MAP3K5 -252216 sc-eQTL 9.17e-02 -0.375 0.221 0.051 pDC L2
ENSG00000286313 AL360178.1 659319 sc-eQTL 5.82e-01 0.101 0.183 0.051 pDC L2
ENSG00000286646 AL121933.2 -243784 sc-eQTL 3.64e-01 0.187 0.205 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000135525 MAP7 -10558 eQTL 0.000279 -0.182 0.05 0.0 0.0 0.0579
ENSG00000182747 SLC35D3 -382040 eQTL 0.00374 -0.192 0.066 0.0 0.0 0.0579
ENSG00000197442 MAP3K5 -252216 eQTL 0.0167 -0.0625 0.0261 0.0 0.0 0.0579

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina