Genes within 1Mb (chr12:113001763:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089060 SLC8B1 -357730 eQTL 4.93e-03 -0.0699 0.0248 0.0 0.0 0.416
ENSG00000089127 OAS1 94980 eQTL 2.80e-02 0.0244 0.0111 0.0 0.0 0.416
ENSG00000089169 RPH3A 431383 eQTL 6.63e-12 0.212 0.0305 0.0 0.0 0.416
ENSG00000089248 ERP29 988415 eQTL 2.82e-02 -0.03 0.0137 0.00232 0.0 0.416
ENSG00000111335 OAS2 23368 eQTL 5.95e-04 -0.0415 0.012 0.00443 0.00386 0.416
ENSG00000123064 DDX54 -183716 eQTL 2.16e-03 0.0346 0.0112 0.0 0.0 0.416
ENSG00000135144 DTX1 -54946 eQTL 7.64e-04 -0.0575 0.017 0.0 0.0 0.416
ENSG00000173064 HECTD4 619324 eQTL 3.34e-03 -0.0438 0.0149 0.0 0.0 0.416
ENSG00000179295 PTPN11 583412 eQTL 3.70e-02 0.0311 0.0149 0.0 0.0 0.416


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089169 RPH3A 431383 1.11e-06 6.09e-07 7.97e-08 3.96e-07 1.07e-07 2.16e-07 5.49e-07 1.03e-07 5.06e-07 2.26e-07 7.67e-07 3.91e-07 8.34e-07 1.49e-07 1.57e-07 2.08e-07 4.3e-07 3.95e-07 1.56e-07 1.17e-07 1.92e-07 3.13e-07 3.3e-07 1.17e-07 7.94e-07 2.34e-07 2.58e-07 1.95e-07 3.27e-07 6.27e-07 2.83e-07 7.69e-08 4.35e-08 1.39e-07 3.31e-07 7.86e-08 1.14e-07 9.84e-08 4.44e-08 5.32e-08 2.95e-08 4.35e-07 6.3e-08 1.92e-08 1.08e-07 1.22e-08 7.25e-08 2.35e-08 5.35e-08
ENSG00000089248 ERP29 988415 2.69e-07 1.11e-07 3.62e-08 1.82e-07 8.92e-08 9.87e-08 1.42e-07 5.33e-08 1.41e-07 4.4e-08 1.56e-07 8.14e-08 1.33e-07 6.38e-08 5.55e-08 7.5e-08 3.94e-08 1.14e-07 5.19e-08 4.2e-08 1.04e-07 1.27e-07 1.26e-07 4.26e-08 1.33e-07 1.14e-07 1.11e-07 8.71e-08 1.03e-07 1.1e-07 9.73e-08 3.96e-08 3.28e-08 8.65e-08 8.96e-08 3.96e-08 4.89e-08 9.26e-08 7.58e-08 3.18e-08 4.76e-08 1.37e-07 5.24e-08 1.09e-08 6.38e-08 1.66e-08 1.22e-07 3.83e-09 4.73e-08
ENSG00000111335 OAS2 23368 2.47e-05 1.9e-05 2.94e-06 1.02e-05 3.02e-06 8.91e-06 2.2e-05 3.09e-06 1.66e-05 8.27e-06 2.18e-05 8.31e-06 3.06e-05 7.03e-06 5.11e-06 1.01e-05 9.14e-06 1.59e-05 4.28e-06 4.17e-06 7.95e-06 1.73e-05 1.74e-05 4.82e-06 2.74e-05 5.34e-06 8e-06 6.65e-06 1.7e-05 1.61e-05 1.16e-05 1.05e-06 1.38e-06 4.1e-06 7.28e-06 3.73e-06 1.75e-06 2.51e-06 2.84e-06 2.03e-06 1.3e-06 2.36e-05 2.64e-06 1.97e-07 1.36e-06 2.45e-06 2.95e-06 8.57e-07 6.37e-07
ENSG00000173064 HECTD4 619324 3.77e-07 1.59e-07 5.35e-08 2.24e-07 1.03e-07 8.75e-08 2.24e-07 5.62e-08 1.85e-07 8.53e-08 1.83e-07 1.37e-07 2.38e-07 8.15e-08 5.69e-08 8.08e-08 5.57e-08 1.8e-07 7.12e-08 5.33e-08 1.18e-07 1.42e-07 1.64e-07 3.22e-08 2.17e-07 1.31e-07 1.2e-07 1.06e-07 1.31e-07 1.36e-07 1.21e-07 3.84e-08 3.65e-08 9.81e-08 5.24e-08 2.85e-08 4.49e-08 6.32e-08 6.28e-08 5.13e-08 5.8e-08 1.59e-07 3.31e-08 2.07e-08 3.29e-08 8.31e-09 8.74e-08 0.0 4.83e-08