Genes within 1Mb (chr12:112679586:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 837358 eQTL 5.21e-05 0.0655 0.0161 0.0 0.0 0.294
ENSG00000089169 RPH3A 109206 eQTL 1.51e-04 0.123 0.0322 0.0 0.0 0.294
ENSG00000089234 BRAP 993630 pQTL 2.60e-02 0.0348 0.0156 0.0 0.0 0.296
ENSG00000111275 ALDH2 912699 pQTL 6.01e-06 0.125 0.0275 0.0 0.0 0.296
ENSG00000111300 NAA25 570790 eQTL 3.26e-02 0.0279 0.013 0.0 0.0 0.294
ENSG00000166578 IQCD -541508 eQTL 4.54e-02 -0.0791 0.0395 0.00121 0.0 0.294
ENSG00000173064 HECTD4 297147 eQTL 4.34e-10 -0.096 0.0152 0.0 0.0 0.294
ENSG00000234608 MAPKAPK5-AS1 836684 eQTL 1.88e-03 0.0441 0.0141 0.00114 0.0 0.294


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 837358 2.67e-07 1.19e-07 3.69e-08 1.84e-07 9.21e-08 1e-07 1.49e-07 5.37e-08 1.44e-07 4.74e-08 1.6e-07 8.36e-08 1.41e-07 6.56e-08 5.99e-08 7.37e-08 3.98e-08 1.21e-07 5.39e-08 4.45e-08 1.08e-07 1.27e-07 1.39e-07 3.42e-08 1.37e-07 1.14e-07 1.06e-07 9.36e-08 1.09e-07 1.07e-07 9.64e-08 3.87e-08 3.35e-08 8.44e-08 8.38e-08 3.94e-08 5.03e-08 9.26e-08 6.56e-08 3.77e-08 4.37e-08 1.33e-07 4.52e-08 1.86e-08 5.43e-08 1.83e-08 1.19e-07 3.83e-09 4.9e-08
ENSG00000089169 RPH3A 109206 4.19e-06 4.09e-06 7.57e-07 2.14e-06 1.12e-06 1.19e-06 3.23e-06 9.12e-07 3.49e-06 1.73e-06 4.22e-06 2.48e-06 6.51e-06 1.9e-06 1.18e-06 2.34e-06 1.79e-06 2.89e-06 1.27e-06 9.52e-07 2.28e-06 3.91e-06 3.4e-06 1.59e-06 4.95e-06 1.32e-06 1.87e-06 1.37e-06 4.26e-06 4.14e-06 2.04e-06 5.76e-07 7.92e-07 1.87e-06 1.94e-06 9.08e-07 8.96e-07 5.11e-07 1.08e-06 3.8e-07 4.72e-07 4.75e-06 4.62e-07 1.65e-07 3.75e-07 3.22e-07 7.92e-07 2.26e-07 3.24e-07
ENSG00000166578 IQCD -541508 3.1e-07 1.7e-07 6.28e-08 2.26e-07 1.05e-07 8.4e-08 2.5e-07 5.84e-08 1.75e-07 1.03e-07 1.83e-07 1.31e-07 2.38e-07 8.44e-08 5.97e-08 9.11e-08 4.63e-08 1.91e-07 7.36e-08 6.16e-08 1.23e-07 1.7e-07 1.73e-07 4.27e-08 2.37e-07 1.51e-07 1.23e-07 1.26e-07 1.34e-07 1.39e-07 1.22e-07 4.77e-08 4.23e-08 9.72e-08 5.24e-08 3.11e-08 4.54e-08 7.68e-08 6.33e-08 6.19e-08 5.1e-08 1.55e-07 4.17e-08 1.55e-08 3.34e-08 8.31e-09 7.13e-08 2.13e-09 4.97e-08
ENSG00000173064 HECTD4 297147 1.27e-06 8.81e-07 1.85e-07 3.5e-07 1.4e-07 3.3e-07 8.7e-07 2.68e-07 8.66e-07 2.69e-07 1.12e-06 5.45e-07 1.37e-06 2.09e-07 4.03e-07 4.29e-07 6.67e-07 5.26e-07 4e-07 3.72e-07 2.86e-07 6.27e-07 6.11e-07 4.38e-07 1.64e-06 2.55e-07 5.04e-07 4.59e-07 8.16e-07 9.57e-07 4.61e-07 4.53e-08 1.34e-07 3.51e-07 3.24e-07 2.78e-07 2.79e-07 1.41e-07 1.61e-07 9.61e-09 1.97e-07 1.09e-06 6.24e-08 4.11e-08 1.93e-07 4.43e-08 1.97e-07 8.08e-08 5.77e-08
ENSG00000234608 MAPKAPK5-AS1 836684 2.69e-07 1.19e-07 3.69e-08 1.84e-07 9.21e-08 1e-07 1.49e-07 5.37e-08 1.44e-07 4.74e-08 1.6e-07 8.36e-08 1.41e-07 6.56e-08 5.99e-08 7.37e-08 3.98e-08 1.21e-07 5.39e-08 4.45e-08 1.08e-07 1.27e-07 1.39e-07 3.42e-08 1.37e-07 1.14e-07 1.06e-07 9.36e-08 1.09e-07 1.07e-07 9.64e-08 3.87e-08 3.35e-08 8.44e-08 8.38e-08 3.94e-08 5.03e-08 9.26e-08 6.56e-08 3.77e-08 4.37e-08 1.33e-07 4.52e-08 1.86e-08 5.43e-08 1.83e-08 1.19e-07 3.83e-09 4.9e-08