Genes within 1Mb (chr12:112521130:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 678902 eQTL 1.66e-87 -0.335 0.0152 0.0 0.00204 0.196
ENSG00000089169 RPH3A -49250 eQTL 6.08e-04 -0.127 0.0371 0.0 0.0 0.196
ENSG00000089234 BRAP 835174 pQTL 3.40e-02 -0.0384 0.0181 0.0 0.0 0.198
ENSG00000089248 ERP29 507782 eQTL 3.37e-09 -0.0956 0.016 0.00192 0.00175 0.196
ENSG00000111275 ALDH2 754243 pQTL 7.28e-05 -0.127 0.0319 0.0 0.0 0.198
ENSG00000111300 NAA25 412334 eQTL 6.71e-01 0.00638 0.015 0.00103 0.0 0.196
ENSG00000135144 DTX1 -535579 eQTL 2.86e-02 0.0446 0.0204 0.0 0.0 0.196
ENSG00000173064 HECTD4 138691 eQTL 1.24e-50 0.252 0.0158 0.0 0.002 0.196
ENSG00000198270 TMEM116 507945 eQTL 1.31e-19 0.193 0.0208 0.0043 0.0042 0.196
ENSG00000204842 ATXN2 921454 eQTL 4.05e-02 0.0343 0.0167 0.0 0.0 0.196
ENSG00000213152 RPL7AP60 218467 eQTL 2.10e-03 -0.143 0.0465 0.0 0.0 0.196
ENSG00000274227 AC073575.2 501700 eQTL 6.90e-03 -0.128 0.0474 0.00217 0.00156 0.196


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 678902 4.68e-07 2.4e-07 8.99e-08 2.45e-07 1.05e-07 1.26e-07 3.42e-07 9.78e-08 2.76e-07 1.65e-07 2.84e-07 2.11e-07 3.6e-07 8.55e-08 9.2e-08 1.53e-07 1.01e-07 2.9e-07 1.36e-07 7.49e-08 1.57e-07 2.48e-07 2.26e-07 5.01e-08 3.14e-07 2.46e-07 1.78e-07 1.54e-07 1.98e-07 1.81e-07 1.52e-07 5.08e-08 5.09e-08 1.27e-07 8.75e-08 6.23e-08 7.97e-08 6.1e-08 4.9e-08 8.06e-08 4.68e-08 1.79e-07 3.14e-08 1.11e-08 4e-08 8.42e-09 1.05e-07 0.0 5.49e-08
ENSG00000089169 RPH3A -49250 9.76e-06 1.13e-05 2.44e-06 7.29e-06 2.7e-06 5.69e-06 1.38e-05 2.9e-06 1.17e-05 6.12e-06 1.44e-05 6.53e-06 1.93e-05 4.17e-06 3.87e-06 8.42e-06 6.68e-06 1.08e-05 4.28e-06 4.04e-06 6.98e-06 1.18e-05 1.17e-05 5.06e-06 1.95e-05 5.29e-06 7.48e-06 5.13e-06 1.45e-05 1.19e-05 7.59e-06 1.33e-06 1.55e-06 5.37e-06 5.59e-06 3.93e-06 2.72e-06 2.45e-06 3.22e-06 2.3e-06 1.71e-06 1.36e-05 2.21e-06 4.41e-07 2.03e-06 2.49e-06 2.62e-06 1.35e-06 1.27e-06
ENSG00000089248 ERP29 507782 9.14e-07 5.74e-07 1.59e-07 3.77e-07 1.05e-07 2.54e-07 5.8e-07 2.47e-07 6.71e-07 3.1e-07 8.15e-07 4.75e-07 8.34e-07 1.6e-07 2.77e-07 3.57e-07 5.27e-07 4.27e-07 2.87e-07 1.86e-07 2.55e-07 5.11e-07 4.13e-07 2.19e-07 8.09e-07 2.44e-07 4.27e-07 2.69e-07 4.88e-07 5.56e-07 3.13e-07 5.71e-08 5.78e-08 2.22e-07 3.4e-07 2.04e-07 1.94e-07 1.06e-07 7.72e-08 2.8e-08 1.01e-07 4.82e-07 5.44e-08 1.71e-08 1.26e-07 1.48e-08 1.3e-07 2.48e-08 6.12e-08
ENSG00000139405 \N -664396 4.89e-07 2.5e-07 8.9e-08 2.41e-07 1.09e-07 1.26e-07 3.44e-07 9.91e-08 2.78e-07 1.78e-07 2.98e-07 2.28e-07 3.95e-07 8.85e-08 9.33e-08 1.63e-07 1.17e-07 2.96e-07 1.5e-07 7.54e-08 1.68e-07 2.51e-07 2.48e-07 6.52e-08 3.27e-07 2.42e-07 1.85e-07 1.61e-07 2.03e-07 1.89e-07 1.59e-07 5.3e-08 4.96e-08 1.17e-07 1.07e-07 6.85e-08 8.87e-08 6.31e-08 4.78e-08 8.09e-08 4.9e-08 2e-07 2.89e-08 1.09e-08 4.36e-08 8.76e-09 9.52e-08 2.71e-09 5.69e-08
ENSG00000173064 HECTD4 138691 4.54e-06 4.87e-06 6.57e-07 2.73e-06 1.73e-06 1.59e-06 4.21e-06 1.24e-06 4.91e-06 2.69e-06 5.21e-06 3.27e-06 7.05e-06 2.49e-06 1.31e-06 4.06e-06 1.84e-06 3.85e-06 1.47e-06 1.44e-06 2.67e-06 4.96e-06 4.56e-06 1.93e-06 5.89e-06 2.09e-06 2.27e-06 1.83e-06 4.46e-06 4.19e-06 2.79e-06 4.82e-07 7.54e-07 2.33e-06 2.2e-06 1.33e-06 1.19e-06 4.36e-07 9.49e-07 6.24e-07 9.55e-07 5.49e-06 4.55e-07 1.49e-07 7.77e-07 1.14e-06 1.01e-06 6.96e-07 6e-07
ENSG00000198270 TMEM116 507945 9.14e-07 5.74e-07 1.59e-07 3.77e-07 1.05e-07 2.54e-07 5.8e-07 2.47e-07 6.62e-07 3.1e-07 8.15e-07 4.75e-07 8.34e-07 1.6e-07 2.77e-07 3.57e-07 5.27e-07 4.27e-07 2.87e-07 1.86e-07 2.55e-07 5.11e-07 4.13e-07 2.19e-07 8.09e-07 2.44e-07 4.27e-07 2.69e-07 4.88e-07 5.56e-07 3.13e-07 5.71e-08 5.78e-08 2.22e-07 3.4e-07 1.94e-07 1.94e-07 9.84e-08 7.72e-08 2.77e-08 1.01e-07 4.82e-07 5.44e-08 1.71e-08 1.26e-07 1.48e-08 1.3e-07 2.48e-08 6.12e-08
ENSG00000213152 RPL7AP60 218467 2.23e-06 2.71e-06 5.62e-07 1.72e-06 6.3e-07 8.4e-07 1.8e-06 9.02e-07 2.17e-06 1.18e-06 2.45e-06 1.46e-06 3.49e-06 1.31e-06 9.73e-07 1.93e-06 1.23e-06 2.24e-06 1.48e-06 1.5e-06 1.39e-06 3.03e-06 2.47e-06 1.22e-06 3.16e-06 1.22e-06 1.47e-06 1.67e-06 2.39e-06 1.68e-06 1.55e-06 4.71e-07 6.12e-07 1.42e-06 1.02e-06 8.95e-07 9.24e-07 4.18e-07 1.31e-06 3.99e-07 2.79e-07 2.88e-06 6.14e-07 2.15e-07 3.45e-07 3.66e-07 8.74e-07 2.63e-07 2.72e-07
ENSG00000229186 \N 621867 5.85e-07 2.88e-07 1.02e-07 2.53e-07 1.08e-07 1.57e-07 4.05e-07 1.31e-07 3.51e-07 2.12e-07 3.92e-07 3.08e-07 4.54e-07 9.48e-08 1.27e-07 1.96e-07 1.85e-07 3.39e-07 1.7e-07 8.11e-08 1.87e-07 2.99e-07 2.81e-07 1.03e-07 4.11e-07 2.55e-07 2.22e-07 1.77e-07 2.57e-07 2.39e-07 1.86e-07 7.91e-08 5.75e-08 1.39e-07 1.54e-07 8.75e-08 1.06e-07 7.62e-08 5.86e-08 7.77e-08 2.81e-08 2.6e-07 1.65e-08 1.43e-08 6.59e-08 1.32e-08 7.36e-08 3.04e-09 5.54e-08