Genes within 1Mb (chr12:112333259:T:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 491031 eQTL 1.42e-46 -0.323 0.0213 0.0 0.0 0.108
ENSG00000089169 RPH3A -237121 eQTL 9.99e-03 -0.122 0.0473 0.0 0.0 0.108
ENSG00000089248 ERP29 319911 eQTL 1.23e-04 -0.0794 0.0206 0.0 0.0 0.108
ENSG00000111252 SH2B3 927311 pQTL 1.60e-02 -0.0556 0.0231 0.0 0.0 0.107
ENSG00000111275 ALDH2 566372 pQTL 1.95e-02 -0.0965 0.0413 0.0 0.0 0.107
ENSG00000111335 OAS2 -645136 eQTL 3.27e-02 0.0392 0.0183 0.0 0.0 0.108
ENSG00000135144 DTX1 -723450 eQTL 5.73e-03 0.0716 0.0259 0.0 0.0 0.108
ENSG00000173064 HECTD4 -49180 eQTL 1.08e-20 0.207 0.0217 0.0 0.0 0.108
ENSG00000198270 TMEM116 320074 eQTL 6.78e-10 0.169 0.0271 0.0 0.0 0.108
ENSG00000198324 PHETA1 964138 eQTL 6.86e-08 0.162 0.0298 0.0 0.0 0.108
ENSG00000204842 ATXN2 733583 eQTL 9.44e-03 0.0553 0.0213 0.0 0.0 0.108
ENSG00000257595 LINC02356 963977 eQTL 4.25e-02 0.104 0.0513 0.0 0.0 0.108
ENSG00000274227 AC073575.2 313829 eQTL 4.52e-02 -0.121 0.0604 0.00132 0.0 0.108


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 491031 1.25e-06 8.9e-07 1.6e-07 4.26e-07 1.05e-07 3.28e-07 5.49e-07 8.17e-08 5.3e-07 2.39e-07 7.32e-07 3.73e-07 9.37e-07 1.49e-07 1.9e-07 2.69e-07 2.07e-07 3.82e-07 1.7e-07 1.41e-07 2.01e-07 5.18e-07 3.08e-07 4.91e-08 9.82e-07 2.33e-07 3.37e-07 2.83e-07 3.88e-07 4.51e-07 3.66e-07 7.6e-08 4.28e-08 1.37e-07 3.48e-07 6.73e-08 8.75e-08 7.64e-08 5.7e-08 7.89e-08 5.23e-08 7.38e-07 5.84e-08 1.84e-08 6.59e-08 1.31e-08 9.95e-08 3.25e-09 4.52e-08
ENSG00000089248 ERP29 319911 1.9e-06 2.46e-06 2.4e-07 1.26e-06 2.95e-07 6.94e-07 1.51e-06 3.49e-07 1.78e-06 5.89e-07 2.1e-06 8.44e-07 2.6e-06 2.82e-07 5.34e-07 9.97e-07 8.95e-07 8.27e-07 8.35e-07 6.49e-07 8.18e-07 1.92e-06 8.94e-07 5.36e-07 2.45e-06 4.17e-07 1.02e-06 8.64e-07 1.63e-06 1.25e-06 8.43e-07 1.89e-07 1.89e-07 6.95e-07 5.46e-07 4.44e-07 4.75e-07 2.34e-07 2.44e-07 1.3e-07 3.01e-07 2.2e-06 3.7e-07 3.39e-08 1.81e-07 1.46e-07 2.57e-07 7.74e-08 9.32e-08
ENSG00000173064 HECTD4 -49180 3.49e-05 2.22e-05 3.02e-06 1.02e-05 2.41e-06 1.04e-05 2.18e-05 2.33e-06 1.62e-05 8.35e-06 2.23e-05 7.7e-06 2.82e-05 6.39e-06 4.72e-06 1.01e-05 7.86e-06 1.41e-05 4.15e-06 3.76e-06 8.02e-06 1.73e-05 1.54e-05 3.91e-06 2.64e-05 5.23e-06 8.02e-06 6.92e-06 1.61e-05 1.3e-05 1.16e-05 1.19e-06 1.23e-06 3.72e-06 6.8e-06 3.17e-06 1.73e-06 2.79e-06 2.06e-06 1.84e-06 1.11e-06 2.26e-05 2.68e-06 2.09e-07 1.46e-06 2.27e-06 2.46e-06 6.83e-07 5.68e-07
ENSG00000198270 TMEM116 320074 1.9e-06 2.46e-06 2.4e-07 1.26e-06 2.95e-07 6.94e-07 1.51e-06 3.49e-07 1.78e-06 5.89e-07 2.1e-06 8.44e-07 2.6e-06 2.82e-07 5.34e-07 9.67e-07 8.95e-07 8.27e-07 8.35e-07 6.49e-07 8.18e-07 1.92e-06 9.11e-07 5.36e-07 2.45e-06 4.17e-07 1.03e-06 8.64e-07 1.63e-06 1.25e-06 8.51e-07 1.89e-07 1.89e-07 6.95e-07 5.46e-07 4.44e-07 4.75e-07 2.34e-07 2.44e-07 1.3e-07 3.01e-07 2.2e-06 3.7e-07 3.39e-08 1.81e-07 1.46e-07 2.57e-07 7.74e-08 9.32e-08
ENSG00000198324 PHETA1 964138 2.76e-07 1.27e-07 4.48e-08 1.82e-07 8.92e-08 1e-07 1.42e-07 5.49e-08 1.44e-07 4.4e-08 1.62e-07 8.14e-08 1.41e-07 6.38e-08 5.84e-08 7.37e-08 4.48e-08 1.14e-07 5.19e-08 4.21e-08 1.05e-07 1.28e-07 1.32e-07 4.53e-08 1.37e-07 1.19e-07 1.08e-07 9.36e-08 1.05e-07 1.12e-07 9.91e-08 4.07e-08 3.3e-08 8.65e-08 8.74e-08 3.99e-08 4.75e-08 9.65e-08 7.92e-08 3.03e-08 4.57e-08 1.36e-07 5.08e-08 1.61e-08 7.91e-08 1.83e-08 1.24e-07 3.99e-09 4.91e-08
ENSG00000213152 \N 30596 4.97e-05 2.74e-05 4.66e-06 1.29e-05 3.23e-06 1.46e-05 3.06e-05 3.39e-06 2e-05 1.1e-05 2.93e-05 9.87e-06 3.59e-05 9.05e-06 5.35e-06 1.29e-05 1e-05 1.93e-05 5.8e-06 4.92e-06 1.01e-05 2.44e-05 2.13e-05 5.19e-06 3.21e-05 5.96e-06 9.99e-06 8.79e-06 2.14e-05 1.69e-05 1.34e-05 1.65e-06 1.64e-06 4.39e-06 8.76e-06 4.16e-06 2.05e-06 3.14e-06 3.21e-06 2.49e-06 1.63e-06 2.95e-05 3.38e-06 2.8e-07 2.12e-06 2.61e-06 3.43e-06 1.22e-06 1.04e-06