Genes within 1Mb (chr12:111853672:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 11444 eQTL 1.42e-04 -0.0754 0.0197 0.0 0.0 0.161
ENSG00000111271 ACAD10 167608 eQTL 9.21e-03 0.0511 0.0196 0.0 0.0 0.161
ENSG00000111275 ALDH2 86785 pQTL 1.50e-02 0.0814 0.0334 0.0 0.0 0.167
ENSG00000111275 ALDH2 86785 eQTL 5.87e-01 -0.0121 0.0223 0.002 0.0 0.161
ENSG00000111300 NAA25 -255124 eQTL 2.16e-30 0.177 0.0149 0.00208 0.00168 0.161
ENSG00000135148 TRAFD1 -271873 eQTL 2.75e-02 0.0301 0.0136 0.00102 0.0 0.161
ENSG00000173064 HECTD4 -528767 eQTL 1.92e-15 -0.148 0.0184 0.00309 0.0 0.161
ENSG00000179295 PTPN11 -564679 eQTL 2.11e-19 0.167 0.0181 0.00428 0.00398 0.161
ENSG00000198270 TMEM116 -159513 eQTL 1.87e-32 0.265 0.0215 0.0 0.0 0.161
ENSG00000204842 ATXN2 253996 eQTL 4.65e-03 -0.0504 0.0178 0.0 0.0 0.161
ENSG00000234608 MAPKAPK5-AS1 10770 eQTL 2.38e-29 0.189 0.0163 0.00398 0.00425 0.161


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111300 NAA25 -255124 1.39e-06 1.08e-06 2.66e-07 1.14e-06 3.76e-07 5.87e-07 1.53e-06 4.04e-07 1.59e-06 6.19e-07 1.84e-06 9.21e-07 2.45e-06 2.83e-07 4.98e-07 9.72e-07 9.41e-07 9.52e-07 7.7e-07 4.77e-07 7.8e-07 1.91e-06 1.03e-06 5.81e-07 2.25e-06 7.64e-07 1.03e-06 9.09e-07 1.61e-06 1.22e-06 7.69e-07 2.96e-07 2.88e-07 5.71e-07 5.38e-07 5.35e-07 7.15e-07 2.73e-07 4.69e-07 3.21e-07 3.35e-07 1.62e-06 1.68e-07 6.48e-08 3.14e-07 1.47e-07 2.47e-07 1.15e-07 2.07e-07
ENSG00000173064 HECTD4 -528767 7.23e-07 3.11e-07 1.08e-07 2.53e-07 1.08e-07 1.54e-07 4.05e-07 9.26e-08 2.78e-07 1.7e-07 3.66e-07 3.21e-07 5.39e-07 9.48e-08 1.45e-07 1.84e-07 1.69e-07 3.04e-07 1.5e-07 8.86e-08 1.61e-07 2.86e-07 2.63e-07 1.13e-07 4.46e-07 2.29e-07 2.08e-07 1.77e-07 2.31e-07 2.75e-07 1.93e-07 7.71e-08 6.08e-08 1.27e-07 1.69e-07 6.83e-08 6.95e-08 6.2e-08 5.89e-08 5.64e-08 4.63e-08 2.9e-07 1.21e-08 7.23e-09 8.24e-08 9.12e-09 9.83e-08 3.09e-09 5.71e-08
ENSG00000179295 PTPN11 -564679 5.85e-07 2.56e-07 9.16e-08 2.41e-07 1.09e-07 1.25e-07 3.42e-07 7.79e-08 2.56e-07 1.46e-07 2.84e-07 2.49e-07 4.27e-07 8.55e-08 1.12e-07 1.49e-07 1.01e-07 2.87e-07 9.71e-08 7.29e-08 1.52e-07 2.45e-07 2.26e-07 7.36e-08 3.55e-07 2.01e-07 1.78e-07 1.68e-07 1.98e-07 2.01e-07 1.76e-07 6.78e-08 4.93e-08 1.15e-07 1.27e-07 5.2e-08 5.71e-08 5.8e-08 4.82e-08 7.65e-08 3.43e-08 2.43e-07 2.89e-08 1.43e-08 7.26e-08 8.07e-09 9.84e-08 2.75e-09 5.16e-08
ENSG00000198270 TMEM116 -159513 3.64e-06 2.78e-06 5.8e-07 1.85e-06 7.76e-07 7.74e-07 2.29e-06 8.93e-07 2.27e-06 1.19e-06 2.6e-06 1.72e-06 4.08e-06 1.4e-06 9.62e-07 2.1e-06 1.57e-06 2.15e-06 1.54e-06 1.2e-06 1.4e-06 3.23e-06 2.58e-06 1.64e-06 4.08e-06 1.28e-06 1.51e-06 1.84e-06 2.83e-06 2.46e-06 2.01e-06 4.69e-07 6.46e-07 1.45e-06 1.54e-06 9.54e-07 9.08e-07 4.21e-07 1.28e-06 3.46e-07 3.2e-07 3.42e-06 6.51e-07 1.96e-07 3.81e-07 3.67e-07 8.85e-07 2.07e-07 1.79e-07
ENSG00000229186 \N -45591 9.86e-06 1.04e-05 2.16e-06 6.2e-06 2.42e-06 4.9e-06 1.19e-05 2.08e-06 1.02e-05 5.31e-06 1.33e-05 5.9e-06 1.74e-05 3.66e-06 3.21e-06 6.79e-06 5.67e-06 9.38e-06 3.17e-06 3.13e-06 6.46e-06 1.04e-05 9.94e-06 4.02e-06 1.65e-05 4.53e-06 5.97e-06 4.64e-06 1.22e-05 1.1e-05 6.36e-06 1.08e-06 1.32e-06 3.8e-06 4.88e-06 2.85e-06 1.76e-06 2e-06 2.22e-06 1.3e-06 1.46e-06 1.29e-05 1.66e-06 2.85e-07 1.36e-06 1.76e-06 1.91e-06 7.89e-07 5.93e-07
ENSG00000234608 MAPKAPK5-AS1 10770 2.93e-05 2.95e-05 6.48e-06 1.59e-05 6.33e-06 1.52e-05 4.33e-05 5.02e-06 2.93e-05 1.44e-05 3.66e-05 1.74e-05 4.89e-05 1.35e-05 6.95e-06 1.88e-05 1.84e-05 2.59e-05 9.12e-06 8.56e-06 1.69e-05 3.13e-05 3.06e-05 1.18e-05 4.38e-05 8.55e-06 1.41e-05 1.24e-05 3.19e-05 3.66e-05 1.9e-05 2.24e-06 4.04e-06 8.63e-06 1.27e-05 7.78e-06 4.28e-06 3.82e-06 6.51e-06 4e-06 1.96e-06 3.65e-05 3.8e-06 5.07e-07 3.06e-06 4.81e-06 4.42e-06 2.25e-06 1.62e-06