Genes within 1Mb (chr12:111452342:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 -389886 eQTL 4.59e-13 0.196 0.0267 0.0 0.0 0.0775
ENSG00000089248 ERP29 -561006 eQTL 2.77e-03 0.0717 0.0239 0.0 0.0 0.0775
ENSG00000111252 SH2B3 46394 pQTL 1.42e-03 0.0831 0.026 0.0 0.0 0.0802
ENSG00000111275 ALDH2 -314545 eQTL 2.16e-04 0.114 0.0306 0.0011 0.0 0.0775
ENSG00000122986 HVCN1 747392 eQTL 1.16e-01 0.0395 0.0251 0.00107 0.0 0.0775
ENSG00000173064 HECTD4 -930097 eQTL 8.96e-14 -0.193 0.0255 0.0 0.0 0.0775
ENSG00000196850 PPTC7 869024 eQTL 2.42e-02 -0.0446 0.0197 0.00105 0.0 0.0775
ENSG00000198270 TMEM116 -560843 eQTL 1.01e-02 -0.0821 0.0319 0.0 0.0 0.0775
ENSG00000198324 PHETA1 83221 eQTL 6.20e-08 -0.188 0.0344 0.0 0.0 0.0775
ENSG00000204842 ATXN2 -147334 eQTL 1.69e-02 -0.0589 0.0246 0.0 0.0 0.0775
ENSG00000213152 RPL7AP60 -850321 eQTL 1.45e-02 0.168 0.0685 0.0 0.0 0.0775
ENSG00000241680 RPL31P49 991354 eQTL 8.01e-02 0.123 0.0702 0.00117 0.0 0.0775


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 -389886 4.89e-07 1.33e-07 4.48e-08 1.84e-07 8.92e-08 9.05e-08 1.9e-07 5.33e-08 1.45e-07 4.4e-08 1.62e-07 7.78e-08 1.95e-07 6.56e-08 6.12e-08 7.3e-08 3.87e-08 1.18e-07 5.82e-08 4.04e-08 1.25e-07 1.24e-07 1.62e-07 4.53e-08 1.37e-07 1.15e-07 1.08e-07 9.32e-08 1.16e-07 1.07e-07 9.92e-08 4.07e-08 3.61e-08 8.25e-08 8.74e-08 3.95e-08 5.01e-08 9.55e-08 7.52e-08 3.05e-08 3.61e-08 2.6e-07 5.21e-08 0.0 8.79e-08 1.74e-08 1.3e-07 4.33e-09 4.77e-08
ENSG00000089248 ERP29 -561006 2.74e-07 1.01e-07 3.31e-08 1.7e-07 1.02e-07 9.32e-08 1.41e-07 5.24e-08 1.37e-07 4.23e-08 1.61e-07 7.6e-08 1.26e-07 6.07e-08 5.14e-08 7.87e-08 5.1e-08 1.07e-07 5.22e-08 3.59e-08 1.05e-07 1.33e-07 1.26e-07 5.01e-08 1.32e-07 1.09e-07 1.13e-07 8.45e-08 9.97e-08 1.1e-07 9.75e-08 3.72e-08 2.74e-08 8e-08 9.41e-08 4.02e-08 4.85e-08 9.06e-08 8.22e-08 3.74e-08 4.02e-08 1.33e-07 3.82e-08 0.0 1.09e-07 1.8e-08 1.45e-07 4.7e-09 4.61e-08
ENSG00000111249 \N 418177 3.62e-07 1.27e-07 3.88e-08 1.82e-07 9.02e-08 9.76e-08 1.67e-07 5.49e-08 1.44e-07 4.38e-08 1.59e-07 7.88e-08 1.69e-07 6.38e-08 6.02e-08 7.17e-08 3.9e-08 1.14e-07 5.36e-08 4.07e-08 1.19e-07 1.28e-07 1.5e-07 4.82e-08 1.33e-07 1.13e-07 1.11e-07 8.71e-08 1.08e-07 1.07e-07 9.64e-08 3.76e-08 3.16e-08 8.3e-08 8.82e-08 3.76e-08 4.72e-08 9.56e-08 7.92e-08 3.12e-08 2.99e-08 1.64e-07 4.89e-08 0.0 9.21e-08 1.75e-08 1.34e-07 4.41e-09 4.85e-08
ENSG00000111252 SH2B3 46394 3.44e-05 2.13e-05 9.77e-07 6.46e-06 2.36e-06 8.4e-06 2.03e-05 2.12e-06 1.27e-05 4.81e-06 1.38e-05 5.88e-06 3.24e-05 5.21e-06 4.14e-06 7.22e-06 6.74e-06 9.79e-06 2.58e-06 2.74e-06 6.27e-06 1.28e-05 1.2e-05 3.26e-06 1.83e-05 3.74e-06 4.67e-06 4.58e-06 1.41e-05 7.98e-06 9.55e-06 4.15e-07 8.85e-07 1.96e-06 4.78e-06 2.11e-06 1.19e-06 4.5e-07 1.57e-06 8.19e-07 2.23e-07 5.34e-05 1.4e-06 1.99e-07 6.83e-07 1.19e-06 9.71e-07 6.9e-07 4.68e-07
ENSG00000122986 HVCN1 747392 2.66e-07 1.11e-07 3.28e-08 1.67e-07 1.03e-07 9.05e-08 1.36e-07 5.29e-08 1.32e-07 3.99e-08 1.59e-07 7.49e-08 1.21e-07 6.1e-08 4.89e-08 7.76e-08 5.15e-08 1.06e-07 5.12e-08 2.85e-08 1.03e-07 1.31e-07 1.31e-07 5.19e-08 1.33e-07 1.03e-07 1.11e-07 8.49e-08 1.05e-07 1.09e-07 9.5e-08 3.41e-08 2.74e-08 8.09e-08 9.88e-08 4.26e-08 5.09e-08 8.28e-08 8.48e-08 3.87e-08 3.18e-08 1.36e-07 4.51e-08 0.0 1.12e-07 1.83e-08 1.5e-07 4.82e-09 4.72e-08
ENSG00000173064 HECTD4 -930097 2.6e-07 1.11e-07 3.34e-08 1.65e-07 1.03e-07 9.14e-08 1.36e-07 5.29e-08 1.32e-07 3.99e-08 1.55e-07 7.4e-08 1.2e-07 6.1e-08 4.77e-08 7.4e-08 5.15e-08 1.02e-07 4.91e-08 2.88e-08 1.03e-07 1.31e-07 1.31e-07 5.23e-08 1.32e-07 1.03e-07 1.12e-07 8.27e-08 1.05e-07 1.09e-07 9.43e-08 3.19e-08 2.75e-08 8.21e-08 1.03e-07 4.14e-08 4.01e-08 8.48e-08 8.44e-08 3.87e-08 3.31e-08 1.4e-07 4.51e-08 0.0 1.15e-07 1.86e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000196850 PPTC7 869024 2.66e-07 1.11e-07 3.34e-08 1.65e-07 1.03e-07 9.14e-08 1.36e-07 5.29e-08 1.32e-07 3.99e-08 1.59e-07 7.49e-08 1.2e-07 6.1e-08 4.77e-08 7.4e-08 5.15e-08 1.02e-07 4.91e-08 2.88e-08 1.03e-07 1.31e-07 1.31e-07 5.23e-08 1.32e-07 1.03e-07 1.12e-07 8.27e-08 1.05e-07 1.09e-07 9.43e-08 3.19e-08 2.75e-08 8.21e-08 1.03e-07 4.14e-08 4.7e-08 8.28e-08 8.44e-08 3.87e-08 3.31e-08 1.39e-07 4.34e-08 0.0 1.15e-07 1.86e-08 1.5e-07 4.82e-09 4.72e-08
ENSG00000198270 TMEM116 -560843 2.74e-07 1.01e-07 3.31e-08 1.7e-07 1.02e-07 9.32e-08 1.41e-07 5.24e-08 1.37e-07 4.23e-08 1.61e-07 7.6e-08 1.26e-07 6.07e-08 5.14e-08 7.87e-08 5.1e-08 1.07e-07 5.22e-08 3.59e-08 1.05e-07 1.33e-07 1.26e-07 5.01e-08 1.32e-07 1.09e-07 1.13e-07 8.45e-08 9.97e-08 1.1e-07 9.75e-08 3.72e-08 2.74e-08 8e-08 9.41e-08 4.02e-08 4.85e-08 9.06e-08 8.22e-08 3.74e-08 4.02e-08 1.33e-07 3.82e-08 0.0 1.09e-07 1.8e-08 1.45e-07 4.7e-09 4.61e-08
ENSG00000198324 PHETA1 83221 1.5e-05 1.28e-05 6.9e-07 3.69e-06 1.5e-06 5.12e-06 1.03e-05 1.26e-06 6.16e-06 2.5e-06 8.09e-06 2.97e-06 1.7e-05 3.8e-06 2.19e-06 5.39e-06 3.81e-06 3.79e-06 1.49e-06 1.54e-06 3.56e-06 7.98e-06 6.71e-06 1.62e-06 9.75e-06 1.96e-06 2.87e-06 2.09e-06 7.53e-06 4.67e-06 4.6e-06 4.54e-07 7.37e-07 1.8e-06 2.36e-06 9.53e-07 9.66e-07 4.67e-07 9.23e-07 3.42e-07 3.35e-07 3.36e-05 6.52e-07 8.98e-08 4.32e-07 3.35e-07 6.79e-07 2.22e-07 1.41e-07
ENSG00000213152 RPL7AP60 -850321 2.66e-07 1.11e-07 3.34e-08 1.65e-07 1.03e-07 9.14e-08 1.36e-07 5.29e-08 1.32e-07 3.99e-08 1.59e-07 7.49e-08 1.21e-07 6.1e-08 4.77e-08 7.4e-08 5.15e-08 1.02e-07 4.91e-08 2.88e-08 1.03e-07 1.31e-07 1.31e-07 5.23e-08 1.32e-07 1.03e-07 1.12e-07 8.27e-08 1.05e-07 1.09e-07 9.5e-08 3.19e-08 2.75e-08 8.21e-08 1.01e-07 4.14e-08 4.7e-08 8.28e-08 8.44e-08 3.87e-08 3.31e-08 1.39e-07 4.34e-08 0.0 1.15e-07 1.86e-08 1.5e-07 4.82e-09 4.72e-08