Genes within 1Mb (chr12:111297733:G:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 -544495 eQTL 7.83e-06 -0.111 0.0247 0.0 0.0 0.0952
ENSG00000111249 CUX2 263568 eQTL 5.30e-03 0.117 0.0418 0.00339 0.00118 0.0952
ENSG00000111252 SH2B3 -108215 pQTL 1.15e-02 -0.0622 0.0246 0.0 0.0 0.0932
ENSG00000135148 TRAFD1 -827812 eQTL 3.77e-02 -0.0356 0.0171 0.00143 0.0 0.0952
ENSG00000186298 PPP1CC 554794 pQTL 3.17e-02 -0.0498 0.0231 0.00141 0.0 0.0932
ENSG00000198324 PHETA1 -71388 eQTL 9.46e-07 0.155 0.0314 0.0 0.0 0.0952
ENSG00000204852 TCTN1 683706 eQTL 1.50e-01 0.0359 0.0249 0.00115 0.0 0.0952
ENSG00000204856 FAM216A 828952 eQTL 3.38e-02 -0.0726 0.0342 0.0 0.0 0.0952
ENSG00000257595 LINC02356 -71549 eQTL 2.28e-04 0.198 0.0536 0.0 0.0 0.0952


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 -544495 7.23e-07 2.5e-07 1.14e-07 3.57e-07 1.07e-07 1.71e-07 4.05e-07 7.65e-08 2.75e-07 2.14e-07 3.21e-07 2.11e-07 4.74e-07 9.48e-08 1.32e-07 1.33e-07 8.74e-08 2.96e-07 1.62e-07 8.25e-08 1.6e-07 2.51e-07 2.48e-07 1.13e-07 4.67e-07 1.82e-07 2.52e-07 1.77e-07 2.4e-07 5.99e-07 1.93e-07 7.69e-08 5.58e-08 1.21e-07 1.76e-07 6.23e-08 7.52e-08 1.16e-07 4.9e-08 8.16e-08 2.81e-08 2.15e-07 5.54e-08 5.83e-09 8.24e-08 1.25e-08 9.95e-08 1.28e-08 6.03e-08
ENSG00000198324 PHETA1 -71388 9.7e-06 1.21e-05 2.48e-06 7.79e-06 2.32e-06 5.6e-06 1.53e-05 2.44e-06 1.07e-05 6.14e-06 1.4e-05 5.9e-06 1.82e-05 4.2e-06 3.8e-06 7.47e-06 6.55e-06 9.58e-06 3.56e-06 3.23e-06 6.67e-06 1.2e-05 1.01e-05 4.25e-06 2.04e-05 4.4e-06 7.06e-06 5.08e-06 1.35e-05 1.32e-05 7.54e-06 1.19e-06 1.4e-06 3.7e-06 5.59e-06 3.29e-06 1.81e-06 2.6e-06 2.42e-06 1.65e-06 1.21e-06 1.51e-05 2.34e-06 3.24e-07 9.12e-07 1.96e-06 2.11e-06 7.99e-07 9.75e-07
ENSG00000204856 FAM216A 828952 2.77e-07 1.3e-07 5.91e-08 2.05e-07 9.24e-08 8.33e-08 1.6e-07 5.43e-08 1.45e-07 6.4e-08 1.55e-07 9.19e-08 1.53e-07 7.37e-08 6.25e-08 7.36e-08 4.09e-08 1.33e-07 6.32e-08 4.78e-08 1.21e-07 1.24e-07 1.45e-07 2.91e-08 1.63e-07 1.14e-07 1.17e-07 9.74e-08 1.23e-07 1.05e-07 1.02e-07 3.54e-08 3.51e-08 8.56e-08 5.64e-08 3.04e-08 5.22e-08 7.1e-08 6.55e-08 3.8e-08 4.94e-08 1.35e-07 3.2e-08 1.08e-08 3.84e-08 1.68e-08 8.74e-08 1.96e-09 4.81e-08
ENSG00000257595 LINC02356 -71549 9.7e-06 1.21e-05 2.48e-06 7.79e-06 2.32e-06 5.6e-06 1.53e-05 2.4e-06 1.07e-05 6.2e-06 1.4e-05 5.9e-06 1.82e-05 4.18e-06 3.75e-06 7.47e-06 6.55e-06 9.51e-06 3.56e-06 3.23e-06 6.67e-06 1.2e-05 1.02e-05 4.25e-06 2.04e-05 4.45e-06 7.06e-06 5.08e-06 1.35e-05 1.32e-05 7.47e-06 1.19e-06 1.36e-06 3.7e-06 5.59e-06 3.22e-06 1.81e-06 2.6e-06 2.42e-06 1.6e-06 1.21e-06 1.48e-05 2.34e-06 3.24e-07 9.39e-07 1.96e-06 2.11e-06 7.89e-07 9.57e-07