Genes within 1Mb (chr12:111278914:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 -563314 eQTL 3.26e-06 -0.0732 0.0156 0.0 0.0 0.305
ENSG00000111231 GPN3 809646 eQTL 1.55e-04 0.086 0.0226 0.0 0.0 0.305
ENSG00000111249 CUX2 244749 eQTL 2.72e-02 0.0587 0.0265 0.00131 0.0 0.305
ENSG00000111275 ALDH2 -487973 pQTL 1.72e-05 -0.119 0.0275 0.0 0.0 0.309
ENSG00000135148 TRAFD1 -846631 eQTL 1.31e-02 -0.027 0.0108 0.00215 0.0 0.305
ENSG00000198270 TMEM116 -734271 eQTL 5.44e-04 0.0635 0.0183 0.0 0.0 0.305
ENSG00000198324 PHETA1 -90207 eQTL 3.24e-07 0.102 0.0199 0.0 0.0 0.305
ENSG00000234608 MAPKAPK5-AS1 -563988 eQTL 4.62e-02 0.0276 0.0138 0.00112 0.0 0.305
ENSG00000257595 LINC02356 -90368 eQTL 5.20e-05 0.138 0.0339 0.0 0.0 0.305
ENSG00000258359 PCNPP1 -391448 eQTL 9.52e-03 -0.0937 0.0361 0.0 0.0 0.305
ENSG00000274227 AC073575.2 -740516 eQTL 9.68e-02 -0.0669 0.0402 0.00113 0.0 0.305


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089022 MAPKAPK5 -563314 4.21e-07 2.89e-07 6.72e-08 2.62e-07 1.07e-07 1.26e-07 3.25e-07 5.84e-08 1.98e-07 1.15e-07 2.38e-07 1.91e-07 3.48e-07 8.55e-08 7.79e-08 1.06e-07 5.73e-08 2.33e-07 8e-08 8e-08 1.23e-07 1.98e-07 1.89e-07 3.41e-08 3.55e-07 1.51e-07 1.48e-07 1.54e-07 1.47e-07 2e-07 1.39e-07 4.69e-08 4.34e-08 1.03e-07 1.69e-07 3.57e-08 5.45e-08 5.92e-08 6.45e-08 7.17e-08 4.47e-08 2.15e-07 3.65e-08 1.89e-08 4.36e-08 8.07e-09 9.23e-08 0.0 4.68e-08
ENSG00000111231 GPN3 809646 2.76e-07 1.36e-07 4.91e-08 2.05e-07 9.79e-08 8.45e-08 1.6e-07 5.43e-08 1.45e-07 5.67e-08 1.52e-07 1.05e-07 1.53e-07 7.64e-08 6.18e-08 7.49e-08 4.17e-08 1.33e-07 6.07e-08 4.3e-08 1.19e-07 1.24e-07 1.45e-07 2.64e-08 1.65e-07 1.14e-07 1.13e-07 9.92e-08 1.2e-07 1.05e-07 1.02e-07 3.68e-08 3.89e-08 8.11e-08 2.97e-08 3.53e-08 5.45e-08 8.61e-08 6.54e-08 3.86e-08 5.14e-08 1.46e-07 5.2e-08 1.43e-08 3.84e-08 1.89e-08 1.2e-07 1.89e-09 5.02e-08
ENSG00000111249 CUX2 244749 1.43e-06 1.81e-06 2.48e-07 1.25e-06 3.48e-07 6.48e-07 1.49e-06 3.85e-07 1.5e-06 5.99e-07 2.06e-06 9.26e-07 2.56e-06 3.61e-07 5.36e-07 9.37e-07 9.34e-07 9.1e-07 7.7e-07 6.26e-07 7.16e-07 1.82e-06 1.12e-06 5.43e-07 2.34e-06 5.67e-07 1.02e-06 8.92e-07 1.53e-06 1.3e-06 7.79e-07 1.53e-07 2.45e-07 6.64e-07 6.47e-07 4.77e-07 6.19e-07 2.73e-07 4.18e-07 2.64e-07 2.73e-07 1.66e-06 1.66e-07 1.74e-07 2.24e-07 1.85e-07 2.3e-07 5.92e-08 1.68e-07
ENSG00000151164 \N 777259 2.8e-07 1.33e-07 4.98e-08 2.07e-07 1.01e-07 8.21e-08 1.67e-07 5.48e-08 1.45e-07 6.08e-08 1.57e-07 1.08e-07 1.69e-07 7.64e-08 6.25e-08 7.5e-08 4.09e-08 1.4e-07 6.32e-08 4.89e-08 1.21e-07 1.24e-07 1.44e-07 2.91e-08 1.68e-07 1.21e-07 1.18e-07 1.04e-07 1.23e-07 9.49e-08 1.06e-07 3.08e-08 4.02e-08 8.56e-08 3.71e-08 3.04e-08 5.7e-08 8.63e-08 6.37e-08 4.47e-08 4.94e-08 1.46e-07 5.22e-08 1.08e-08 3.42e-08 1.77e-08 1.2e-07 1.9e-09 5.01e-08
ENSG00000198270 TMEM116 -734271 2.91e-07 1.53e-07 5.35e-08 2.22e-07 9.8e-08 8.33e-08 1.81e-07 5.53e-08 1.47e-07 6.4e-08 1.67e-07 1.19e-07 1.79e-07 8.13e-08 5.72e-08 7.23e-08 4.12e-08 1.44e-07 6.92e-08 5.04e-08 1.22e-07 1.25e-07 1.58e-07 3.17e-08 1.98e-07 1.25e-07 1.17e-07 1.04e-07 1.24e-07 1.05e-07 1.08e-07 2.93e-08 3.43e-08 8.7e-08 3.97e-08 2.99e-08 5.42e-08 9.17e-08 6.86e-08 3.82e-08 5.41e-08 1.46e-07 5.08e-08 7.26e-09 3.41e-08 1.68e-08 1e-07 1.93e-09 4.8e-08
ENSG00000198324 PHETA1 -90207 4.85e-06 7.18e-06 7.29e-07 3.37e-06 1.59e-06 1.81e-06 7.61e-06 9.98e-07 4.98e-06 2.97e-06 7.16e-06 2.94e-06 9.48e-06 2.37e-06 1.11e-06 3.81e-06 2.24e-06 3.95e-06 1.51e-06 1.15e-06 2.88e-06 5.51e-06 4.73e-06 1.49e-06 9.02e-06 1.96e-06 2.29e-06 1.74e-06 5.92e-06 7.22e-06 2.62e-06 5.76e-07 5.04e-07 1.81e-06 2.03e-06 1.16e-06 9.76e-07 4.56e-07 8.39e-07 5.75e-07 4.63e-07 6.8e-06 4.9e-07 1.69e-07 5.79e-07 1.14e-06 1.13e-06 6.6e-07 4.23e-07