Genes within 1Mb (chr12:110699743:A:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089234 BRAP -986213 pQTL 7.85e-03 -0.0559 0.021 0.00573 0.0 0.136
ENSG00000111199 TRPV4 866342 eQTL 3.50e-02 0.0814 0.0385 0.0 0.0 0.14
ENSG00000111229 ARPC3 249406 eQTL 4.21e-02 0.0224 0.011 0.0 0.0 0.14
ENSG00000111237 VPS29 197626 eQTL 2.35e-04 0.0606 0.0164 0.0 0.0 0.14
ENSG00000139437 TCHP 799469 eQTL 2.72e-02 0.0501 0.0226 0.0 0.0 0.14
ENSG00000186298 PPP1CC -43196 eQTL 1.99e-02 0.0392 0.0168 0.00273 0.0 0.14
ENSG00000196510 ANAPC7 296013 eQTL 8.99e-07 0.108 0.0218 0.243 0.211 0.14
ENSG00000196850 PPTC7 116425 eQTL 6.81e-03 -0.041 0.0151 0.00215 0.00127 0.14
ENSG00000204852 TCTN1 85716 eQTL 4.66e-05 0.0853 0.0208 0.0 0.0 0.14


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000174437 \N 418987 2.77e-07 1.36e-07 6.72e-08 1.83e-07 9.21e-08 9.76e-08 1.53e-07 5.49e-08 1.45e-07 4.74e-08 1.57e-07 7.75e-08 1.52e-07 8e-08 5.82e-08 7.3e-08 3.87e-08 1.26e-07 6.75e-08 4.21e-08 1.19e-07 1.28e-07 1.39e-07 3.68e-08 1.55e-07 1.14e-07 1.07e-07 9.74e-08 1.05e-07 1.12e-07 9.91e-08 2.93e-08 3.35e-08 8.68e-08 3.52e-08 3.93e-08 5.01e-08 9.68e-08 6.37e-08 3.92e-08 4.51e-08 1.46e-07 3.02e-08 1.88e-08 3.84e-08 1.99e-08 1.25e-07 1.9e-09 4.85e-08
ENSG00000196510 ANAPC7 296013 8.43e-07 5.6e-07 1.63e-07 3.56e-07 1.03e-07 1.57e-07 4.05e-07 5.56e-08 2.53e-07 1.28e-07 3.32e-07 1.22e-07 5.09e-07 1.58e-07 2.14e-07 1.14e-07 8.53e-08 2.75e-07 1.56e-07 8.41e-08 1.48e-07 2.07e-07 2.2e-07 3.67e-08 5.53e-07 1.82e-07 1.74e-07 1.95e-07 1.54e-07 1.59e-07 1.35e-07 7.4e-08 4.87e-08 1.03e-07 2.61e-07 4.86e-08 5.71e-08 8.2e-08 5.7e-08 5.8e-08 6e-08 4.16e-07 7.23e-08 1.28e-08 8.68e-08 1.01e-08 8.74e-08 3.04e-09 4.67e-08
ENSG00000204852 TCTN1 85716 7.81e-06 9.41e-06 7.29e-07 4.71e-06 1.3e-06 1.56e-06 8.56e-06 1.04e-06 5.2e-06 2.84e-06 8.15e-06 3.12e-06 1.07e-05 3.86e-06 1.02e-06 4.01e-06 1.89e-06 3.74e-06 1.58e-06 1.2e-06 2.75e-06 5.53e-06 4.69e-06 1.4e-06 1.23e-05 2.01e-06 3.25e-06 1.71e-06 5.21e-06 4.67e-06 2.63e-06 4.51e-07 7.93e-07 1.71e-06 2.6e-06 9.01e-07 9.91e-07 4.72e-07 8.39e-07 4.88e-07 1.96e-07 1.01e-05 6.59e-07 1.68e-07 3.43e-07 3.93e-07 7.1e-07 3.19e-07 3.52e-07