JOB

ANAPC7(ENSG00000196510)

View on Pheweb.jp , UCSC , GWAS Catalog , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force

(Shown only for PIP>0.001)

qtl plot

Variant ID	rs ID	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	PIP (SuSiE)	PIP (FINEMAP)	MAF
chr12:110403574:G:A	rs75347070	-156	eQTL	4.59e-07	0.108	0.0213	0.624	0.516	0.136
chr12:110404116:GC:G	rs144448426	386	eQTL	7.47e-11	-0.25	0.0379	0.99	0.984	0.0442
chr12:110403121:G:A	\N	-609	eQTL	3.93e-02	-0.319	0.154	0.0	0.0	0.00245
chr12:110402922:C:G	\N	-808	eQTL	1.79e-06	-0.276	0.0574	0.0	0.0	0.0206
chr12:110405656:A:G	rs28813775	1926	eQTL	6.85e-03	-0.0441	0.0163	0.0	0.0	0.381
chr12:110406384:C:T	rs28811332	2654	eQTL	4.01e-03	-0.0469	0.0163	0.0	0.0	0.382
chr12:110410781:C:A	\N	7051	eQTL	1.00e-02	0.158	0.0611	0.0	0.0	0.0162
chr12:110391231:A:C	rs28555214	-12499	eQTL	4.02e-03	-0.0462	0.016	0.0	0.0	0.39
chr12:110388495:G:A	rs79846732	-15235	eQTL	9.95e-03	0.158	0.061	0.0	0.0	0.0162
chr12:110388040:TTTC:T	\N	-15690	eQTL	6.27e-03	0.315	0.115	0.0	0.00119	0.00442
chr12:110421296:T:C	rs11065636	17566	eQTL	7.39e-03	-0.044	0.0164	0.0	0.0	0.375
chr12:110421297:C:T	rs11065637	17567	eQTL	7.39e-03	-0.044	0.0164	0.0	0.0	0.375
chr12:110384134:G:A	rs28816104	-19596	eQTL	1.49e-03	-0.0486	0.0152	0.0	0.0	0.474
chr12:110423400:G:A	\N	19670	eQTL	1.72e-06	-0.276	0.0574	0.0	0.0	0.0206
chr12:110427380:C:G	\N	23650	eQTL	7.08e-03	-0.523	0.194	0.0	0.00105	0.00196
chr12:110379004:G:A	\N	-24726	eQTL	2.45e-03	0.658	0.217	0.0	0.00262	0.00147
chr12:110371593:C:T	\N	-32137	eQTL	4.06e-02	-0.334	0.163	0.0	0.0	0.00294
chr12:110436756:A:T	\N	33026	eQTL	2.04e-02	0.114	0.0489	0.0	0.0	0.025
chr12:110441421:A:G	rs12822385	37691	eQTL	7.03e-03	-0.0436	0.0161	0.0	0.0	0.384
chr12:110362139:A:G	rs12811603	-41591	eQTL	3.97e-03	-0.0469	0.0163	0.0	0.0	0.381
chr12:110358568:T:G	\N	-45162	eQTL	8.44e-03	0.304	0.115	0.0	0.0	0.00491
chr12:110450005:G:GGA	\N	46275	eQTL	7.89e-03	-0.0437	0.0164	0.0	0.0	0.374
chr12:110470449:A:C	rs12369492	66719	eQTL	1.50e-03	0.0529	0.0166	0.0	0.0	0.339
chr12:110331923:A:G	\N	-71807	eQTL	4.42e-05	-0.256	0.0624	0.0	0.0	0.0177
chr12:110330637:A:T	rs77118057	-73093	eQTL	9.87e-03	0.158	0.0609	0.0	0.0	0.0162
chr12:110329887:G:A	rs77514576	-73843	eQTL	9.87e-03	0.158	0.0609	0.0	0.0	0.0162
chr12:110319780:A:G	rs3026465	-83950	eQTL	1.23e-02	0.0428	0.0171	0.0	0.0	0.305
chr12:110492347:A:G	\N	88617	eQTL	3.36e-04	-0.295	0.0821	0.0	0.0	0.00981
chr12:110492831:C:T	rs118139783	89101	eQTL	3.61e-03	0.161	0.0552	0.0	0.0012	0.0201
chr12:110310759:C:T	rs76804988	-92971	eQTL	9.88e-03	0.157	0.0609	0.0	0.0	0.0162
chr12:110307607:T:C	\N	-96123	eQTL	2.52e-02	0.261	0.117	0.0	0.0	0.00442
chr12:110306186:C:T	rs199566982	-97544	eQTL	7.32e-05	0.217	0.0544	0.00545	0.00641	0.0221
chr12:110306179:G:C	rs7965279	-97551	eQTL	1.11e-02	0.0394	0.0155	0.0	0.0	0.42
chr12:110305237:G:GA	\N	-98493	eQTL	4.66e-02	0.172	0.0861	0.0	0.0	0.00883
chr12:110506494:G:C	rs61942603	102764	eQTL	1.61e-03	0.0528	0.0167	0.0	0.0	0.339
chr12:110298667:G:A	\N	-105063	eQTL	3.17e-06	-0.271	0.0578	0.0	0.0	0.0206
chr12:110510630:C:T	\N	106900	eQTL	4.79e-02	0.168	0.085	0.0	0.0	0.00834
chr12:110511118:C:T	\N	107388	eQTL	4.79e-02	0.168	0.085	0.0	0.0	0.00834
chr12:110296080:G:T	rs74351134	-107650	eQTL	9.86e-03	0.157	0.0609	0.0	0.0	0.0162
chr12:110295039:G:C	\N	-108691	eQTL	9.40e-03	0.287	0.11	0.0	0.0	0.00491
chr12:110519276:G:T	\N	115546	eQTL	2.79e-03	-0.592	0.197	0.0	0.0	0.00147
chr12:110284973:G:A	\N	-118757	eQTL	9.40e-03	0.287	0.11	0.0	0.0	0.00491
chr12:110281136:GA:G	rs558684844	-122594	eQTL	9.82e-03	0.157	0.0608	0.0	0.0	0.0172
chr12:110527273:T:C	rs140572760	123543	eQTL	1.58e-04	-0.205	0.0541	0.0	0.0	0.0191
chr12:110528734:GT:G	rs143082634	125004	eQTL	3.63e-03	0.163	0.0558	0.0	0.00115	0.0196
chr12:110529435:G:A	\N	125705	eQTL	1.26e-05	-0.266	0.0606	0.0	0.0	0.0167
chr12:110277218:C:T	\N	-126512	eQTL	4.03e-02	-0.32	0.156	0.0	0.0	0.00245
chr12:110536041:A:C	rs3825391	132311	eQTL	9.07e-04	-0.051	0.0153	0.0	0.0	0.471
chr12:110537085:T:C	rs10849900	133355	eQTL	3.26e-03	0.0471	0.016	0.0	0.0	0.395
chr12:110268627:A:G	\N	-135103	eQTL	3.37e-06	-0.266	0.0569	0.0	0.0	0.0201
chr12:110539104:C:T	\N	135374	eQTL	3.10e-02	-0.216	0.1	0.0	0.0	0.00687
chr12:110543861:G:A	rs141034698	140131	eQTL	2.97e-02	0.0841	0.0387	0.0	0.0	0.0412
chr12:110251694:C:T	rs140515181	-152036	eQTL	1.28e-02	0.151	0.0604	0.0	0.0	0.0182
chr12:110559156:T:C	rs201725074	155426	eQTL	1.28e-04	0.211	0.0549	0.00326	0.00371	0.0216
chr12:110244640:C:T	\N	-159090	eQTL	3.33e-03	-0.583	0.198	0.0	0.0	0.00147
chr12:110564506:A:G	\N	160776	eQTL	7.55e-04	-0.0517	0.0153	0.0	0.0	0.472
chr12:110567806:C:A	rs34191496	164076	eQTL	7.97e-04	0.0553	0.0164	0.0	0.0	0.349
chr12:110239169:T:A	rs76409839	-164561	eQTL	3.98e-04	0.107	0.0302	0.00159	0.00153	0.0687
chr12:110235432:A:G	\N	-168298	eQTL	3.22e-02	-0.161	0.075	0.0	0.0	0.0113
chr12:110578825:T:G	rs16940902	175095	eQTL	7.71e-04	-0.0516	0.0153	0.0	0.0	0.472
chr12:110581488:TG:T	\N	177758	eQTL	9.86e-03	0.373	0.144	0.0	0.0	0.00294
chr12:110581491:C:A	\N	177761	eQTL	9.86e-03	0.373	0.144	0.0	0.0	0.00294
chr12:110584355:G:A	rs12231707	180625	eQTL	1.12e-03	-0.0501	0.0153	0.0	0.0	0.471
chr12:110221509:G:A	rs2339404	-182221	eQTL	1.58e-02	-0.0378	0.0156	0.0	0.0	0.388
chr12:110597021:G:A	\N	193291	eQTL	4.38e-02	-0.141	0.0696	0.0	0.0	0.0132
chr12:110209051:T:C	\N	-194679	eQTL	3.84e-03	-0.577	0.199	0.0	0.0	0.00147
chr12:110606770:G:A	\N	203040	eQTL	1.06e-02	0.367	0.143	0.0	0.0	0.00294
chr12:110611207:GTGTT:G	\N	207477	eQTL	3.99e-02	-0.159	0.0775	0.0	0.0	0.0108
chr12:110614660:T:A	rs684596	210930	eQTL	4.12e-03	0.0459	0.016	0.0	0.0	0.395
chr12:110615235:C:T	rs75067023	211505	eQTL	2.92e-03	0.167	0.0559	0.0	0.00149	0.0196
chr12:110617305:A:AT	\N	213575	eQTL	1.68e-02	0.266	0.111	0.0	0.0	0.00491
chr12:110623384:G:A	rs140144956	219654	eQTL	9.36e-05	-0.215	0.0547	0.0	0.0	0.0186
chr12:110182856:C:T	rs7300045	-220874	eQTL	1.04e-02	-0.045	0.0175	0.0	0.0	0.272
chr12:110624735:G:A	rs11065682	221005	eQTL	8.37e-04	-0.0514	0.0153	0.0	0.0	0.472
chr12:110635550:G:GGCTGAGGTTGCAGTGA	\N	231820	eQTL	1.54e-03	0.0997	0.0314	0.0	0.0	0.0658
chr12:110171909:C:T	rs11065287	-231821	eQTL	9.50e-03	-0.0407	0.0157	0.0	0.0	0.392
chr12:110169806:G:A	\N	-233924	eQTL	3.35e-02	-0.159	0.0749	0.0	0.0	0.0113
chr12:110638018:C:T	rs11065687	234288	eQTL	9.76e-04	-0.0507	0.0153	0.0	0.0	0.462
chr12:110169154:C:G	rs11065273	-234576	eQTL	1.35e-02	-0.0393	0.0159	0.0	0.0	0.366
chr12:110164795:G:A	rs58423087	-238935	eQTL	1.42e-05	0.116	0.0265	0.0232	0.0238	0.0868
chr12:110144711:A:AT	rs142137585	-259019	eQTL	1.37e-02	-0.0386	0.0156	0.0	0.0	0.387
chr12:110665076:C:A	rs79433027	261346	eQTL	2.22e-06	-0.233	0.049	0.0	0.0	0.024
chr12:110135956:C:T	rs80043689	-267774	eQTL	1.24e-02	0.152	0.0607	0.0	0.0	0.0177
chr12:110133180:C:T	rs11065127	-270550	eQTL	1.34e-02	-0.0387	0.0156	0.0	0.0	0.388
chr12:110126854:A:C	rs10774545	-276876	eQTL	4.92e-02	-0.0334	0.0169	0.0	0.0	0.3
chr12:110682287:C:A	\N	278557	eQTL	1.59e-05	-0.239	0.0551	0.0	0.0	0.0186
chr12:110684301:CT:C	rs35081943	280571	eQTL	4.35e-03	-0.0459	0.016	0.0	0.0	0.405
chr12:110689462:C:G	\N	285732	eQTL	2.89e-03	0.557	0.186	0.0	0.0	0.00196
chr12:110116021:GCTGC:G	rs138419568	-287709	eQTL	1.33e-04	-0.198	0.0517	0.0	0.0	0.0216
chr12:110692623:C:T	\N	288893	eQTL	1.45e-02	-0.223	0.0911	0.0	0.0	0.00883
chr12:110109357:A:C	rs1547975	-294373	eQTL	1.78e-02	-0.0411	0.0173	0.0	0.0	0.268
chr12:110699743:A:T	rs12580187	296013	eQTL	8.99e-07	0.108	0.0218	0.243	0.211	0.14
chr12:110702741:A:G	\N	299011	eQTL	1.04e-03	-0.0537	0.0163	0.0	0.0	0.363
chr12:110709141:C:G	\N	305411	eQTL	2.43e-03	0.659	0.217	0.0	0.00265	0.00147
chr12:110097983:C:T	rs78833043	-305747	eQTL	1.44e-05	0.115	0.0265	0.0229	0.0236	0.0864
chr12:110096713:G:T	rs149922186	-307017	eQTL	1.17e-08	-0.22	0.0383	0.00688	0.0109	0.0427
chr12:110716324:T:C	rs11065704	312594	eQTL	3.95e-02	-0.147	0.0715	0.0	0.0	0.0123
chr12:110725896:TACTAAAA:T	\N	322166	eQTL	2.40e-02	-0.225	0.0995	0.0	0.0	0.00638
chr12:110725904:A:G	\N	322174	eQTL	2.40e-02	-0.225	0.0995	0.0	0.0	0.00638
chr12:110725907:T:C	\N	322177	eQTL	1.45e-03	-0.0527	0.0165	0.0	0.0	0.373
chr12:110725907:T:TC	\N	322177	eQTL	2.40e-02	-0.225	0.0995	0.0	0.0	0.00638
chr12:110727115:A:G	rs55661717	323385	eQTL	9.73e-04	-0.053	0.016	0.0	0.0	0.417
chr12:110728122:A:G	rs7132651	324392	eQTL	9.71e-04	-0.053	0.016	0.0	0.0	0.417
chr12:110730938:C:T	rs10774604	327208	eQTL	5.09e-04	-0.0577	0.0165	0.0	0.0	0.369
chr12:110065760:T:C	rs141187836	-337970	eQTL	1.20e-04	0.195	0.0505	0.0031	0.00362	0.0236
chr12:110061726:T:C	rs7963707	-342004	eQTL	1.57e-02	-0.0424	0.0175	0.0	0.0	0.269
chr12:110057843:A:C	rs10774513	-345887	eQTL	3.97e-02	-0.035	0.017	0.0	0.0	0.296
chr12:110750262:C:T	rs11065711	346532	eQTL	3.57e-03	-0.0473	0.0162	0.0	0.0	0.396
chr12:110056563:C:T	\N	-347167	eQTL	4.18e-02	0.182	0.0893	0.0	0.0	0.00785
chr12:110751738:T:G	rs10161511	348008	eQTL	2.00e-03	-0.0494	0.0159	0.0	0.0	0.398
chr12:110050640:A:G	\N	-353090	eQTL	4.40e-02	-0.321	0.159	0.0	0.0	0.00245
chr12:110760504:C:T	rs12231451	356774	eQTL	1.24e-02	-0.0388	0.0155	0.0	0.0	0.461
chr12:110046255:A:C	rs189677797	-357475	eQTL	1.50e-05	-0.258	0.0592	0.0	0.0	0.0186
chr12:110761677:G:A	\N	357947	eQTL	6.56e-03	-0.128	0.0471	0.0	0.0	0.0304
chr12:110762832:G:A	rs9668929	359102	eQTL	2.45e-03	-0.0491	0.0162	0.0	0.0	0.395
chr12:110038918:G:A	\N	-364812	eQTL	4.21e-02	0.182	0.0894	0.0	0.0	0.00785
chr12:110034682:C:A	\N	-369048	eQTL	4.37e-02	-0.151	0.0749	0.0	0.0	0.0108
chr12:110775786:C:T	\N	372056	eQTL	8.48e-03	0.317	0.12	0.0	0.0	0.00442
chr12:110781635:A:C	rs850518	377905	eQTL	1.65e-02	0.037	0.0154	0.0	0.0	0.461
chr12:110785584:C:T	rs138269360	381854	eQTL	1.03e-05	-0.267	0.0602	0.0	0.0	0.0162
chr12:110019769:A:ATGTT	\N	-383961	eQTL	1.15e-02	0.208	0.0821	0.0	0.0	0.00932
chr12:110016921:C:T	\N	-386809	eQTL	3.69e-02	0.174	0.0835	0.0	0.0	0.00883
chr12:110790794:A:G	rs10774605	387064	eQTL	8.02e-04	0.0549	0.0163	0.0	0.0	0.36
chr12:110791841:C:T	rs850517	388111	eQTL	2.30e-03	0.048	0.0157	0.0	0.0	0.414
chr12:110792775:C:G	\N	389045	eQTL	2.23e-03	0.0481	0.0157	0.0	0.0	0.41
chr12:110793670:A:G	rs850515	389940	eQTL	1.96e-03	0.0487	0.0157	0.0	0.0	0.412
chr12:110012765:A:C	\N	-390965	eQTL	3.60e-03	-0.576	0.197	0.0	0.0	0.00147
chr12:110794758:A:T	rs850514	391028	eQTL	1.99e-03	0.0486	0.0157	0.0	0.0	0.412
chr12:110796494:G:A	rs12825235	392764	eQTL	1.39e-03	0.0505	0.0157	0.0	0.0	0.407
chr12:110010378:T:C	rs6606679	-393352	eQTL	1.32e-02	0.0398	0.016	0.0	0.0	0.376
chr12:110797917:G:A	rs2879525	394187	eQTL	5.51e-04	0.0566	0.0163	0.0	0.0	0.359
chr12:110801552:C:T	rs2520218	397822	eQTL	2.23e-03	0.0481	0.0157	0.0	0.0	0.407
chr12:110801555:A:G	rs2520217	397825	eQTL	2.45e-03	0.0476	0.0157	0.0	0.0	0.412
chr12:110802017:T:C	rs850511	398287	eQTL	1.90e-03	0.0486	0.0156	0.0	0.0	0.412
chr12:110802741:T:G	rs850510	399011	eQTL	1.99e-03	0.0486	0.0157	0.0	0.0	0.412
chr12:110804557:C:T	rs850509	400827	eQTL	1.83e-03	0.049	0.0157	0.0	0.0	0.408
chr12:110805157:T:C	\N	401427	eQTL	2.12e-03	0.0484	0.0157	0.0	0.0	0.412
chr12:110805158:G:A	\N	401428	eQTL	2.12e-03	0.0484	0.0157	0.0	0.0	0.412
chr12:110805214:G:A	\N	401484	eQTL	2.45e-03	0.0476	0.0157	0.0	0.0	0.408
chr12:110001709:T:C	rs76696441	-402021	eQTL	3.51e-02	0.114	0.0538	0.0	0.0	0.0221
chr12:110806534:T:C	rs6489925	402804	eQTL	2.12e-03	0.0484	0.0157	0.0	0.0	0.413
chr12:110808288:T:C	rs10083024	404558	eQTL	2.22e-03	0.0482	0.0157	0.0	0.0	0.415
chr12:110808649:T:C	rs7958142	404919	eQTL	2.22e-03	0.0482	0.0157	0.0	0.0	0.415
chr12:110808836:G:A	rs7974845	405106	eQTL	2.22e-03	0.0482	0.0157	0.0	0.0	0.415
chr12:110810820:C:T	rs11065724	407090	eQTL	1.14e-03	0.0524	0.0161	0.0	0.0	0.398
chr12:110810839:T:C	rs7966263	407109	eQTL	2.21e-03	0.0482	0.0157	0.0	0.0	0.415
chr12:110810973:T:C	rs6489954	407243	eQTL	2.22e-03	0.0482	0.0157	0.0	0.0	0.415
chr12:109996372:A:C	rs28364569	-407358	eQTL	4.75e-08	-0.204	0.0371	0.00137	0.00222	0.0461
chr12:110811099:C:T	rs7136934	407369	eQTL	1.50e-03	0.0502	0.0158	0.0	0.0	0.41
chr12:109984713:T:C	\N	-419017	eQTL	1.37e-02	0.387	0.157	0.0	0.0	0.00245
chr12:109981395:C:T	rs79184643	-422335	eQTL	3.10e-02	0.0929	0.043	0.0	0.0	0.0339
chr12:110826556:C:T	rs113040326	422826	eQTL	2.29e-02	-0.124	0.0543	0.0	0.0	0.0216
chr12:109980095:G:T	rs11069168	-423635	eQTL	4.22e-02	0.0371	0.0182	0.0	0.0	0.247
chr12:109977820:T:TCAAA	rs35204857	-425910	eQTL	2.02e-02	0.037	0.0159	0.0	0.0	0.377
chr12:110831059:C:A	\N	427329	eQTL	2.98e-05	-0.427	0.102	0.0	0.0	0.00589
chr12:110834214:C:T	rs58378071	430484	eQTL	1.76e-03	0.0976	0.0311	0.0	0.0	0.0658
chr12:110836113:C:T	\N	432383	eQTL	4.31e-03	-0.398	0.139	0.0	0.00152	0.00294
chr12:110845644:T:C	rs118067687	441914	eQTL	2.76e-06	-0.199	0.0421	0.0	0.0	0.0348
chr12:109960340:T:A	rs4766646	-443390	eQTL	1.87e-02	0.0373	0.0158	0.0	0.0	0.378
chr12:110858497:C:T	rs117545604	454767	eQTL	6.62e-06	-0.191	0.0421	0.0	0.0	0.0343
chr12:110862180:C:T	rs571797510	458450	eQTL	5.92e-05	0.225	0.0558	0.00821	0.00935	0.0211
chr12:109944070:C:T	\N	-459660	eQTL	1.80e-02	0.251	0.106	0.0	0.0	0.0054
chr12:109943994:G:C	rs79665430	-459736	eQTL	5.42e-08	-0.202	0.0369	0.00118	0.00197	0.0466
chr12:110863613:T:C	rs2005675	459883	eQTL	1.96e-02	0.0379	0.0162	0.0	0.0	0.331
chr12:110865195:T:C	\N	461465	eQTL	8.25e-05	-0.388	0.0982	0.0	0.0	0.00638
chr12:109940768:AC:A	\N	-462962	eQTL	5.36e-03	-0.671	0.24	0.0	0.0	0.00147
chr12:109924475:G:A	rs149946600	-479255	eQTL	3.52e-04	0.107	0.0299	0.00173	0.00161	0.0697
chr12:110883758:G:C	\N	480028	eQTL	2.35e-02	0.51	0.225	0.0	0.0	0.00147
chr12:110885591:T:G	rs12099913	481861	eQTL	1.12e-02	-0.0536	0.0211	0.0	0.0	0.182
chr12:110885604:C:G	rs10849913	481874	eQTL	1.71e-02	-0.0523	0.0219	0.0	0.0	0.166
chr12:110888165:C:T	\N	484435	eQTL	4.70e-02	-0.332	0.167	0.0	0.0	0.00245
chr12:109918089:C:A	\N	-485641	eQTL	2.63e-03	0.625	0.207	0.0	0.00245	0.00147
chr12:109914316:G:A	rs143225720	-489414	eQTL	8.82e-05	-0.22	0.0558	0.0	0.0	0.0206
chr12:109909952:C:T	rs144616130	-493778	eQTL	3.64e-02	0.112	0.0534	0.0	0.0	0.0221
chr12:109909644:AC:A	\N	-494086	eQTL	3.64e-02	0.112	0.0534	0.0	0.0	0.0221
chr12:109908808:A:G	rs151324095	-494922	eQTL	4.98e-04	-0.207	0.0591	0.0	0.0	0.0157
chr12:109904616:T:G	rs11068852	-499114	eQTL	4.42e-02	0.0578	0.0287	0.0	0.0	0.0795
chr12:109902654:T:C	\N	-501076	eQTL	4.44e-02	-0.456	0.227	0.0	0.0	0.00147
chr12:110909748:A:C	rs143857601	506018	eQTL	1.14e-03	-0.196	0.0601	0.0	0.0	0.0167
chr12:109896242:C:T	rs117230232	-507488	eQTL	4.44e-04	0.192	0.0544	0.001	0.00118	0.0211
chr12:109894317:G:A	\N	-509413	eQTL	9.91e-05	0.108	0.0277	0.00363	0.00338	0.0819
chr12:110921050:C:T	\N	517320	eQTL	2.03e-02	0.438	0.188	0.0	0.0	0.00147
chr12:109885626:C:T	\N	-518104	eQTL	2.46e-02	0.361	0.16	0.0	0.0	0.00245
chr12:109875996:C:G	rs77028715	-527734	eQTL	3.70e-02	0.111	0.0533	0.0	0.0	0.0221
chr12:109875949:T:C	rs4766642	-527781	eQTL	4.68e-02	0.0314	0.0158	0.0	0.0	0.395
chr12:109874846:G:A	rs10850914	-528884	eQTL	4.07e-02	0.0323	0.0157	0.0	0.0	0.393
chr12:110933787:G:A	\N	530057	eQTL	3.38e-02	0.373	0.175	0.0	0.0	0.00196
chr12:109873111:C:T	rs7397059	-530619	eQTL	4.34e-02	0.0318	0.0157	0.0	0.0	0.395
chr12:109871380:C:T	\N	-532350	eQTL	2.66e-03	0.623	0.207	0.0	0.0024	0.00147
chr12:109870834:A:AG	\N	-532896	eQTL	2.66e-03	0.623	0.207	0.0	0.0024	0.00147
chr12:109866356:C:G	rs59408807	-537374	eQTL	2.99e-03	0.0743	0.025	0.0	0.0	0.104
chr12:110941949:G:T	\N	538219	eQTL	1.32e-04	-0.375	0.0978	0.0	0.0	0.00638
chr12:110950006:C:T	rs12828010	546276	eQTL	2.37e-02	0.0409	0.0181	0.0	0.0	0.242
chr12:110953867:G:A	\N	550137	eQTL	2.62e-03	0.624	0.207	0.0	0.00242	0.00147
chr12:109851465:C:T	\N	-552265	eQTL	2.66e-03	0.622	0.207	0.0	0.0024	0.00147
chr12:110957728:G:A	\N	553998	eQTL	2.09e-02	-0.285	0.123	0.0	0.0	0.00343
chr12:110960229:G:A	rs142192185	556499	eQTL	1.80e-02	-0.125	0.0526	0.0	0.0	0.024
chr12:110962670:G:C	\N	558940	eQTL	3.54e-02	0.434	0.206	0.0	0.0	0.00147
chr12:109842802:A:G	\N	-560928	eQTL	2.67e-04	-0.312	0.0854	0.0	0.0	0.00883
chr12:110976133:G:C	rs4766529	572403	eQTL	9.50e-03	-0.0493	0.019	0.0	0.0	0.225
chr12:110982469:A:C	\N	578739	eQTL	2.62e-03	0.624	0.207	0.0	0.00246	0.00147
chr12:110983053:A:G	\N	579323	eQTL	1.88e-02	-0.189	0.0803	0.0	0.0	0.00883
chr12:110984591:C:T	\N	580861	eQTL	3.36e-02	0.373	0.175	0.0	0.0	0.00196
chr12:109817961:G:A	rs140510259	-585769	eQTL	2.90e-02	0.17	0.0778	0.0	0.0	0.0103
chr12:109817419:A:C	\N	-586311	eQTL	4.75e-02	-0.206	0.104	0.0	0.0	0.00589
chr12:110997952:T:C	rs60929041	594222	eQTL	1.69e-03	0.0835	0.0265	0.0	0.0	0.0868
chr12:111001306:A:G	rs117686235	597576	eQTL	1.71e-03	0.0835	0.0266	0.0	0.0	0.0868
chr12:111004303:A:T	\N	600573	eQTL	3.74e-02	0.423	0.203	0.0	0.0	0.00147
chr12:109798104:G:A	\N	-605626	eQTL	2.66e-03	0.622	0.207	0.0	0.00243	0.00147
chr12:109795866:G:A	\N	-607864	eQTL	1.47e-02	-0.297	0.121	0.0	0.0	0.00442
chr12:109787741:T:G	\N	-615989	eQTL	4.09e-02	0.406	0.198	0.0	0.0	0.00147
chr12:109783834:G:A	rs75087758	-619896	eQTL	3.18e-03	0.136	0.0459	0.0	0.0	0.0299
chr12:109777855:C:T	\N	-625875	eQTL	2.54e-04	-0.339	0.0923	0.0	0.0	0.00687
chr12:109777311:C:A	\N	-626419	eQTL	9.91e-05	-0.343	0.0879	0.0	0.0	0.00736
chr12:109773186:C:T	\N	-630544	eQTL	4.32e-02	-0.26	0.128	0.0	0.0	0.00393
chr12:109765012:G:A	rs74665569	-638718	eQTL	3.69e-02	-0.0542	0.0259	0.0	0.0	0.0986
chr12:111044912:G:A	rs77337851	641182	eQTL	1.47e-02	0.0601	0.0246	0.0	0.0	0.103
chr12:109762154:C:T	rs78047052	-641576	eQTL	1.45e-02	-0.0616	0.0252	0.0	0.0	0.101
chr12:111053041:G:A	\N	649311	eQTL	4.26e-02	-0.331	0.163	0.0	0.0	0.00245
chr12:109752981:A:G	rs76793444	-650749	eQTL	1.30e-02	0.0658	0.0264	0.0	0.0	0.0937
chr12:111057170:AGGAAAT:A	rs145622741	653440	eQTL	4.57e-04	-0.158	0.045	0.0	0.0	0.0304
chr12:111062695:C:T	rs12580277	658965	eQTL	1.86e-04	0.105	0.0279	0.00226	0.00238	0.0824
chr12:109744518:C:T	rs556805195	-659212	eQTL	1.18e-03	0.191	0.0588	0.0	0.0	0.0186
chr12:109743876:G:T	rs146447254	-659854	eQTL	2.84e-02	0.111	0.0504	0.0	0.0	0.0245
chr12:109743522:C:T	rs147681813	-660208	eQTL	9.01e-03	0.202	0.0772	0.0	0.0	0.0108
chr12:109734382:C:T	rs16939679	-669348	eQTL	4.46e-02	-0.163	0.0812	0.0	0.0	0.00932
chr12:109734345:G:A	rs143164980	-669385	eQTL	6.87e-03	0.21	0.0774	0.0	0.00125	0.0103
chr12:109729956:G:A	rs73407759	-673774	eQTL	2.69e-02	0.0451	0.0204	0.0	0.0	0.167
chr12:109726914:C:A	rs60059002	-676816	eQTL	3.08e-02	0.0436	0.0202	0.0	0.0	0.172
chr12:109725289:C:T	\N	-678441	eQTL	5.09e-03	-0.555	0.197	0.0	0.0	0.00147
chr12:109719826:A:T	rs73407741	-683904	eQTL	3.92e-02	0.041	0.0199	0.0	0.0	0.179
chr12:109717795:C:T	rs73407735	-685935	eQTL	2.14e-02	0.0459	0.0199	0.0	0.0	0.173
chr12:109717659:C:G	rs61941859	-686071	eQTL	2.13e-02	0.046	0.02	0.0	0.0	0.173
chr12:109715870:C:T	rs77346308	-687860	eQTL	4.99e-02	0.0529	0.027	0.0	0.0	0.0893
chr12:109714355:C:T	rs7958870	-689375	eQTL	2.70e-02	0.0444	0.02	0.0	0.0	0.171
chr12:111094346:C:T	\N	690616	eQTL	2.15e-02	0.204	0.0885	0.0	0.0	0.00736
chr12:109710810:A:G	rs76258122	-692920	eQTL	2.07e-02	-0.152	0.0654	0.0	0.0	0.0137
chr12:109708496:G:T	\N	-695234	eQTL	1.53e-02	0.319	0.131	0.0	0.0	0.00393
chr12:109708037:G:A	rs57653496	-695693	eQTL	2.91e-02	0.0437	0.02	0.0	0.0	0.173
chr12:109700269:A:G	rs147891190	-703461	eQTL	4.23e-02	0.103	0.0505	0.0	0.0	0.025
chr12:109699923:C:T	rs16940483	-703807	eQTL	2.82e-02	0.0438	0.0199	0.0	0.0	0.173
chr12:111108481:C:T	\N	704751	eQTL	4.26e-03	0.232	0.0811	0.0	0.00124	0.0108
chr12:111115468:G:A	rs142377656	711738	eQTL	8.91e-03	0.153	0.0585	0.0	0.0018	0.0177
chr12:109684852:C:T	rs1971700	-718878	eQTL	1.15e-02	0.114	0.0449	0.0	0.0	0.0329
chr12:109681889:A:C	rs11067848	-721841	eQTL	7.02e-03	0.122	0.045	0.0	0.0	0.0334
chr12:109680736:C:G	rs11067838	-722994	eQTL	7.19e-03	0.122	0.0454	0.0	0.0	0.0324
chr12:111127792:C:T	rs138081232	724062	eQTL	8.20e-03	0.155	0.0586	0.0	0.00198	0.0177
chr12:111130442:T:C	\N	726712	eQTL	5.96e-03	-0.492	0.179	0.0	0.0	0.00196
chr12:111143763:C:T	\N	740033	eQTL	4.63e-02	0.213	0.107	0.0	0.0	0.0054
chr12:111150772:G:T	\N	747042	eQTL	4.63e-02	-0.275	0.138	0.0	0.0	0.00343
chr12:111154547:T:G	\N	750817	eQTL	4.92e-02	-0.196	0.0993	0.0	0.0	0.00491
chr12:111157479:TA:T	\N	753749	eQTL	7.26e-03	-0.554	0.206	0.0	0.0	0.00245
chr12:111164443:G:T	\N	760713	eQTL	8.71e-03	-0.265	0.101	0.0	0.0	0.00638
chr12:111172101:G:A	\N	768371	eQTL	4.38e-02	-0.315	0.156	0.0	0.0	0.00245
chr12:111201294:G:C	rs3809293	797564	eQTL	2.73e-02	0.0371	0.0168	0.0	0.0	0.286
chr12:111201652:G:C	rs9783423	797922	eQTL	3.42e-02	0.0354	0.0167	0.0	0.0	0.292
chr12:109604957:G:A	rs140525692	-798773	eQTL	1.71e-02	0.144	0.0601	0.0	0.0	0.0177
chr12:109594708:T:C	\N	-809022	eQTL	4.33e-03	0.318	0.111	0.0	0.00179	0.0054
chr12:109592299:G:A	\N	-811431	eQTL	2.86e-02	0.18	0.0821	0.0	0.0	0.0103
chr12:111226521:T:C	\N	822791	eQTL	8.61e-03	0.554	0.21	0.0	0.0	0.00147
chr12:109576900:A:T	rs141279296	-826830	eQTL	2.60e-02	-0.151	0.0676	0.0	0.0	0.0128
chr12:109568519:A:T	rs143988074	-835211	eQTL	9.57e-03	0.197	0.076	0.0	0.0	0.0103
chr12:109558408:CCTGAGGTCACTTT:C	\N	-845322	eQTL	1.70e-02	0.306	0.128	0.0	0.0	0.00393
chr12:109557846:G:A	\N	-845884	eQTL	2.55e-02	-0.151	0.0676	0.0	0.0	0.0128
chr12:109547286:G:A	\N	-856444	eQTL	2.05e-02	0.42	0.181	0.0	0.0	0.00196
chr12:109546783:C:T	rs143858508	-856947	eQTL	1.09e-02	0.194	0.0759	0.0	0.0	0.0108
chr12:111263593:C:G	\N	859863	eQTL	4.25e-02	-0.314	0.155	0.0	0.0	0.00245
chr12:109539146:G:T	\N	-864584	eQTL	3.95e-03	-0.463	0.16	0.0	0.0	0.00245
chr12:109536592:C:T	rs149249654	-867138	eQTL	6.06e-04	0.145	0.0421	0.0	0.00123	0.0353
chr12:109533773:C:G	rs188162376	-869957	eQTL	2.48e-02	-0.152	0.0677	0.0	0.0	0.0128
chr12:111279385:G:T	rs77858937	875655	eQTL	3.25e-02	-0.0414	0.0194	0.0	0.0	0.176
chr12:111279875:G:A	rs80345690	876145	eQTL	2.38e-02	-0.0439	0.0194	0.0	0.0	0.174
chr12:111280258:C:T	rs75162258	876528	eQTL	1.79e-02	-0.0428	0.018	0.0	0.0	0.205
chr12:109525648:C:T	\N	-878082	eQTL	3.14e-03	-0.266	0.09	0.0	0.0	0.00736
chr12:111285858:G:A	rs118075157	882128	eQTL	1.82e-04	0.273	0.0725	0.00216	0.00285	0.0157
chr12:111287302:C:T	rs3809279	883572	eQTL	3.09e-02	-0.042	0.0194	0.0	0.0	0.174
chr12:111298892:G:A	\N	895162	eQTL	1.14e-02	0.227	0.0896	0.0	0.0	0.00834
chr12:111302970:C:T	\N	899240	eQTL	4.24e-03	-0.0702	0.0245	0.0	0.0	0.113
chr12:111304558:T:C	rs78005523	900828	eQTL	1.80e-02	0.123	0.0521	0.0	0.0	0.0221
chr12:111306522:G:A	\N	902792	eQTL	4.45e-02	0.229	0.114	0.0	0.0	0.0054
chr12:109500569:G:A	\N	-903161	eQTL	1.65e-03	-0.313	0.0991	0.0	0.0	0.00589
chr12:111308740:C:T	\N	905010	eQTL	2.00e-02	-0.215	0.0921	0.0	0.0	0.00785
chr12:109495518:C:T	\N	-908212	eQTL	1.13e-02	0.432	0.17	0.0	0.0	0.00196
chr12:109490841:A:C	rs139216420	-912889	eQTL	1.37e-02	0.162	0.0657	0.0	0.0	0.0147
chr12:111320619:C:T	\N	916889	eQTL	4.17e-02	0.461	0.226	0.0	0.0	0.00147
chr12:109485141:T:A	\N	-918589	eQTL	3.14e-02	-0.333	0.155	0.0	0.0	0.00294
chr12:109483590:C:T	\N	-920140	eQTL	3.13e-03	-0.266	0.09	0.0	0.0	0.00736
chr12:109482959:A:T	rs182873254	-920771	eQTL	3.31e-02	0.156	0.0731	0.0	0.0	0.0118
chr12:109482611:C:A	rs138472387	-921119	eQTL	3.31e-02	0.156	0.0731	0.0	0.0	0.0118
chr12:109475820:C:T	rs76949522	-927910	eQTL	3.87e-02	-0.0503	0.0243	0.0	0.0	0.119
chr12:111335541:T:C	rs6490061	931811	eQTL	4.95e-02	-0.0313	0.0159	0.0	0.0	0.337
chr12:109471067:C:T	\N	-932663	eQTL	1.65e-03	-0.313	0.0991	0.0	0.0	0.00589
chr12:109470119:T:C	rs12582711	-933611	eQTL	4.57e-02	-0.0435	0.0217	0.0	0.0	0.156
chr12:109459902:T:C	\N	-943828	eQTL	3.58e-02	-0.273	0.13	0.0	0.0	0.00343
chr12:111351391:G:A	rs79108860	947661	eQTL	2.20e-02	0.116	0.0505	0.0	0.0	0.0226
chr12:111351392:C:T	rs77247408	947662	eQTL	2.20e-02	0.116	0.0505	0.0	0.0	0.0226
chr12:111356243:G:A	rs141224196	952513	eQTL	2.20e-02	0.116	0.0505	0.0	0.0	0.0226
chr12:111362134:G:A	rs148011393	958404	eQTL	2.91e-02	-0.111	0.0509	0.0	0.0	0.024
chr12:109442961:G:A	rs148910601	-960769	eQTL	2.83e-04	0.204	0.0559	0.00213	0.00284	0.0191
chr12:109439585:G:A	\N	-964145	eQTL	3.91e-02	-0.418	0.202	0.0	0.0	0.00147
chr12:111370357:TA:T	rs374001103	966627	eQTL	3.48e-02	-0.107	0.0505	0.0	0.0	0.0245
chr12:109436862:G:A	rs117172219	-966868	eQTL	3.71e-02	0.0907	0.0434	0.0	0.0	0.0329
chr12:109431574:C:T	\N	-972156	eQTL	4.21e-02	0.288	0.141	0.0	0.0	0.00294
chr12:109429012:C:T	rs11066556	-974718	eQTL	4.57e-02	0.0627	0.0314	0.0	0.0	0.0608
chr12:111384732:A:G	rs58050299	981002	eQTL	4.20e-02	0.121	0.0593	0.0	0.0	0.0196
chr12:109418897:T:A	rs7962906	-984833	eQTL	4.98e-02	0.0557	0.0284	0.0	0.0	0.0736
chr12:109418780:G:A	rs12582256	-984950	eQTL	4.76e-02	-0.0338	0.017	0.0	0.0	0.334
chr12:109417940:C:T	rs7978201	-985790	eQTL	4.85e-02	-0.0338	0.0171	0.0	0.0	0.333
chr12:109417631:T:C	rs192458758	-986099	eQTL	1.55e-03	-0.228	0.0718	0.0	0.0	0.0118
chr12:111396357:C:CA	\N	992627	eQTL	1.58e-02	-0.48	0.199	0.0	0.0	0.00147
chr12:111398615:C:T	\N	994885	eQTL	1.26e-02	0.495	0.198	0.0	0.0	0.00147

Expression Fold Change in Massively Parallel Reporter Assay (MPRA)

[Click here to download the full results]

mpra plot

Variant ID	rs ID	TSS Distance	P-Value	Expression Fold Change	Tier	Cell Type
chr12:111335541:T:C	rs6490061	931811	0.203	0.339	None	K562
chr12:111335541:T:C	rs6490061	931811	0.74	-0.0902	None	HepG2