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Genes within 1Mb (chr6:139101444:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 327935 sc-eQTL 7.87e-02 0.219 0.124 0.9 B L1
ENSG00000051620 HEBP2 697913 sc-eQTL 7.96e-01 0.0247 0.0953 0.9 B L1
ENSG00000112378 PERP 994025 sc-eQTL 6.38e-01 0.0448 0.0951 0.9 B L1
ENSG00000112406 HECA -33636 sc-eQTL 9.67e-01 -0.00502 0.121 0.9 B L1
ENSG00000135597 REPS1 113183 sc-eQTL 1.98e-01 0.138 0.107 0.9 B L1
ENSG00000146386 ABRACL 72699 sc-eQTL 7.22e-01 -0.0225 0.063 0.9 B L1
ENSG00000164440 TXLNB -190554 sc-eQTL 5.81e-01 0.0853 0.154 0.9 B L1
ENSG00000164442 CITED2 -273204 sc-eQTL 3.97e-01 0.0825 0.0971 0.9 B L1
ENSG00000226571 AL592429.2 -169918 sc-eQTL 1.99e-01 -0.139 0.108 0.9 B L1
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.40e-02 0.309 0.136 0.9 CD4T L1
ENSG00000051620 HEBP2 697913 sc-eQTL 6.93e-01 0.0365 0.0922 0.9 CD4T L1
ENSG00000112378 PERP 994025 sc-eQTL 5.86e-01 -0.0474 0.0869 0.9 CD4T L1
ENSG00000112406 HECA -33636 sc-eQTL 3.46e-01 0.108 0.114 0.9 CD4T L1
ENSG00000135597 REPS1 113183 sc-eQTL 4.08e-01 0.0745 0.0899 0.9 CD4T L1
ENSG00000146386 ABRACL 72699 sc-eQTL 1.44e-02 -0.161 0.0651 0.9 CD4T L1
ENSG00000164442 CITED2 -273204 sc-eQTL 5.52e-01 0.0672 0.113 0.9 CD4T L1
ENSG00000231329 AL031772.1 -138209 sc-eQTL 1.12e-03 0.358 0.108 0.9 CD4T L1
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.22e-01 0.186 0.152 0.9 CD8T L1
ENSG00000051620 HEBP2 697913 sc-eQTL 5.19e-01 0.0644 0.0997 0.9 CD8T L1
ENSG00000112378 PERP 994025 sc-eQTL 3.00e-01 0.105 0.101 0.9 CD8T L1
ENSG00000112406 HECA -33636 sc-eQTL 2.57e-01 0.124 0.109 0.9 CD8T L1
ENSG00000135597 REPS1 113183 sc-eQTL 8.28e-02 -0.178 0.102 0.9 CD8T L1
ENSG00000146386 ABRACL 72699 sc-eQTL 1.90e-02 -0.136 0.0577 0.9 CD8T L1
ENSG00000164442 CITED2 -273204 sc-eQTL 5.87e-01 0.0603 0.111 0.9 CD8T L1
ENSG00000231329 AL031772.1 -138209 sc-eQTL 1.11e-01 0.214 0.134 0.9 CD8T L1
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.22e-02 0.339 0.147 0.896 DC L1
ENSG00000051620 HEBP2 697913 sc-eQTL 4.10e-01 0.0863 0.104 0.896 DC L1
ENSG00000112406 HECA -33636 sc-eQTL 4.08e-01 0.102 0.122 0.896 DC L1
ENSG00000135540 NHSL1 408873 sc-eQTL 7.59e-01 -0.0419 0.136 0.896 DC L1
ENSG00000135597 REPS1 113183 sc-eQTL 7.39e-01 0.0402 0.121 0.896 DC L1
ENSG00000146386 ABRACL 72699 sc-eQTL 7.56e-02 -0.21 0.117 0.896 DC L1
ENSG00000164442 CITED2 -273204 sc-eQTL 8.66e-01 0.0237 0.14 0.896 DC L1
ENSG00000225177 AL590617.2 408896 sc-eQTL 1.09e-01 0.228 0.142 0.896 DC L1
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.56e-02 0.245 0.109 0.9 Mono L1
ENSG00000051620 HEBP2 697913 sc-eQTL 8.32e-01 -0.0162 0.0763 0.9 Mono L1
ENSG00000112406 HECA -33636 sc-eQTL 1.92e-01 0.131 0.1 0.9 Mono L1
ENSG00000135540 NHSL1 408873 sc-eQTL 2.54e-01 0.164 0.144 0.9 Mono L1
ENSG00000135597 REPS1 113183 sc-eQTL 8.51e-01 -0.0159 0.0844 0.9 Mono L1
ENSG00000146386 ABRACL 72699 sc-eQTL 1.29e-01 -0.166 0.109 0.9 Mono L1
ENSG00000164442 CITED2 -273204 sc-eQTL 7.78e-01 -0.0329 0.116 0.9 Mono L1
ENSG00000225177 AL590617.2 408896 sc-eQTL 1.55e-01 0.213 0.149 0.9 Mono L1
ENSG00000024862 CCDC28A 327935 sc-eQTL 4.49e-01 0.101 0.133 0.899 NK L1
ENSG00000051620 HEBP2 697913 sc-eQTL 2.48e-01 0.136 0.117 0.899 NK L1
ENSG00000112378 PERP 994025 sc-eQTL 7.03e-01 0.0381 0.0996 0.899 NK L1
ENSG00000112406 HECA -33636 sc-eQTL 9.81e-02 0.19 0.114 0.899 NK L1
ENSG00000135597 REPS1 113183 sc-eQTL 7.09e-01 0.041 0.11 0.899 NK L1
ENSG00000146386 ABRACL 72699 sc-eQTL 3.64e-03 -0.231 0.0785 0.899 NK L1
ENSG00000164442 CITED2 -273204 sc-eQTL 9.46e-01 0.00718 0.106 0.899 NK L1
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.13e-01 0.199 0.159 0.9 Other_T L1
ENSG00000051620 HEBP2 697913 sc-eQTL 3.56e-01 0.0952 0.103 0.9 Other_T L1
ENSG00000112378 PERP 994025 sc-eQTL 7.20e-01 0.0457 0.127 0.9 Other_T L1
ENSG00000112406 HECA -33636 sc-eQTL 2.59e-01 -0.131 0.115 0.9 Other_T L1
ENSG00000135597 REPS1 113183 sc-eQTL 4.15e-01 0.102 0.124 0.9 Other_T L1
ENSG00000146386 ABRACL 72699 sc-eQTL 1.35e-02 -0.2 0.0803 0.9 Other_T L1
ENSG00000164442 CITED2 -273204 sc-eQTL 3.64e-01 -0.0866 0.0952 0.9 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 327935 sc-eQTL 7.51e-01 0.0569 0.179 0.903 B_Activated L2
ENSG00000051620 HEBP2 697913 sc-eQTL 7.66e-01 0.0467 0.157 0.903 B_Activated L2
ENSG00000112378 PERP 994025 sc-eQTL 8.98e-01 -0.0104 0.0816 0.903 B_Activated L2
ENSG00000112406 HECA -33636 sc-eQTL 1.47e-01 -0.247 0.17 0.903 B_Activated L2
ENSG00000135597 REPS1 113183 sc-eQTL 4.51e-01 0.135 0.178 0.903 B_Activated L2
ENSG00000146386 ABRACL 72699 sc-eQTL 7.64e-01 0.0487 0.162 0.903 B_Activated L2
ENSG00000164440 TXLNB -190554 sc-eQTL 5.13e-01 0.0906 0.138 0.903 B_Activated L2
ENSG00000164442 CITED2 -273204 sc-eQTL 8.71e-02 -0.297 0.173 0.903 B_Activated L2
ENSG00000226571 AL592429.2 -169918 sc-eQTL 2.15e-01 -0.216 0.173 0.903 B_Activated L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 6.90e-01 0.061 0.153 0.899 B_Intermediate L2
ENSG00000051620 HEBP2 697913 sc-eQTL 6.17e-01 0.053 0.106 0.899 B_Intermediate L2
ENSG00000112378 PERP 994025 sc-eQTL 5.70e-01 -0.0767 0.135 0.899 B_Intermediate L2
ENSG00000112406 HECA -33636 sc-eQTL 3.85e-02 0.273 0.131 0.899 B_Intermediate L2
ENSG00000135597 REPS1 113183 sc-eQTL 7.11e-01 -0.0531 0.143 0.899 B_Intermediate L2
ENSG00000146386 ABRACL 72699 sc-eQTL 1.12e-01 -0.193 0.121 0.899 B_Intermediate L2
ENSG00000164440 TXLNB -190554 sc-eQTL 7.71e-01 0.0434 0.149 0.899 B_Intermediate L2
ENSG00000164442 CITED2 -273204 sc-eQTL 4.01e-01 0.115 0.137 0.899 B_Intermediate L2
ENSG00000226571 AL592429.2 -169918 sc-eQTL 1.36e-01 -0.222 0.148 0.899 B_Intermediate L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 3.50e-02 0.328 0.155 0.899 B_Memory L2
ENSG00000051620 HEBP2 697913 sc-eQTL 5.57e-01 -0.0691 0.117 0.899 B_Memory L2
ENSG00000112378 PERP 994025 sc-eQTL 1.90e-01 0.192 0.146 0.899 B_Memory L2
ENSG00000112406 HECA -33636 sc-eQTL 7.76e-01 -0.0385 0.135 0.899 B_Memory L2
ENSG00000135597 REPS1 113183 sc-eQTL 4.07e-01 0.121 0.146 0.899 B_Memory L2
ENSG00000146386 ABRACL 72699 sc-eQTL 7.71e-01 -0.0338 0.116 0.899 B_Memory L2
ENSG00000164440 TXLNB -190554 sc-eQTL 8.97e-01 -0.0192 0.148 0.899 B_Memory L2
ENSG00000164442 CITED2 -273204 sc-eQTL 8.94e-01 -0.0181 0.136 0.899 B_Memory L2
ENSG00000226571 AL592429.2 -169918 sc-eQTL 9.64e-01 -0.00747 0.167 0.899 B_Memory L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 1.82e-01 0.198 0.147 0.9 B_Naive1 L2
ENSG00000051620 HEBP2 697913 sc-eQTL 6.63e-01 -0.0454 0.104 0.9 B_Naive1 L2
ENSG00000112378 PERP 994025 sc-eQTL 6.07e-02 0.264 0.14 0.9 B_Naive1 L2
ENSG00000112406 HECA -33636 sc-eQTL 6.82e-01 -0.0529 0.129 0.9 B_Naive1 L2
ENSG00000135597 REPS1 113183 sc-eQTL 3.93e-01 0.102 0.119 0.9 B_Naive1 L2
ENSG00000146386 ABRACL 72699 sc-eQTL 4.29e-01 -0.066 0.0834 0.9 B_Naive1 L2
ENSG00000164440 TXLNB -190554 sc-eQTL 4.49e-01 0.119 0.156 0.9 B_Naive1 L2
ENSG00000164442 CITED2 -273204 sc-eQTL 4.04e-01 0.095 0.114 0.9 B_Naive1 L2
ENSG00000226571 AL592429.2 -169918 sc-eQTL 6.91e-01 -0.0594 0.149 0.9 B_Naive1 L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.31e-01 0.174 0.145 0.899 B_Naive2 L2
ENSG00000051620 HEBP2 697913 sc-eQTL 8.32e-01 0.0211 0.0994 0.899 B_Naive2 L2
ENSG00000112378 PERP 994025 sc-eQTL 1.92e-01 -0.156 0.119 0.899 B_Naive2 L2
ENSG00000112406 HECA -33636 sc-eQTL 4.96e-01 -0.0931 0.137 0.899 B_Naive2 L2
ENSG00000135597 REPS1 113183 sc-eQTL 3.66e-01 -0.118 0.13 0.899 B_Naive2 L2
ENSG00000146386 ABRACL 72699 sc-eQTL 8.95e-01 -0.0127 0.0961 0.899 B_Naive2 L2
ENSG00000164440 TXLNB -190554 sc-eQTL 6.89e-01 0.0609 0.152 0.899 B_Naive2 L2
ENSG00000164442 CITED2 -273204 sc-eQTL 1.95e-01 0.201 0.155 0.899 B_Naive2 L2
ENSG00000226571 AL592429.2 -169918 sc-eQTL 8.48e-02 -0.245 0.141 0.899 B_Naive2 L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.32e-01 0.184 0.153 0.898 CD4_CTL L2
ENSG00000051620 HEBP2 697913 sc-eQTL 9.27e-01 0.0123 0.133 0.898 CD4_CTL L2
ENSG00000112378 PERP 994025 sc-eQTL 1.76e-01 -0.219 0.161 0.898 CD4_CTL L2
ENSG00000112406 HECA -33636 sc-eQTL 8.37e-01 -0.032 0.155 0.898 CD4_CTL L2
ENSG00000135597 REPS1 113183 sc-eQTL 7.90e-01 0.0402 0.151 0.898 CD4_CTL L2
ENSG00000146386 ABRACL 72699 sc-eQTL 4.18e-01 -0.111 0.137 0.898 CD4_CTL L2
ENSG00000164442 CITED2 -273204 sc-eQTL 9.09e-01 -0.0158 0.138 0.898 CD4_CTL L2
ENSG00000231329 AL031772.1 -138209 sc-eQTL 6.14e-03 0.387 0.14 0.898 CD4_CTL L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 8.72e-03 0.374 0.141 0.9 CD4_Naive L2
ENSG00000051620 HEBP2 697913 sc-eQTL 7.64e-01 0.027 0.0895 0.9 CD4_Naive L2
ENSG00000112378 PERP 994025 sc-eQTL 6.29e-01 0.0572 0.118 0.9 CD4_Naive L2
ENSG00000112406 HECA -33636 sc-eQTL 6.16e-01 0.0559 0.112 0.9 CD4_Naive L2
ENSG00000135597 REPS1 113183 sc-eQTL 3.72e-01 0.0884 0.0988 0.9 CD4_Naive L2
ENSG00000146386 ABRACL 72699 sc-eQTL 2.03e-01 -0.0847 0.0664 0.9 CD4_Naive L2
ENSG00000164442 CITED2 -273204 sc-eQTL 3.42e-01 0.108 0.113 0.9 CD4_Naive L2
ENSG00000231329 AL031772.1 -138209 sc-eQTL 2.93e-03 0.337 0.112 0.9 CD4_Naive L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 6.04e-01 0.0735 0.142 0.9 CD4_TCM L2
ENSG00000051620 HEBP2 697913 sc-eQTL 3.80e-01 0.0926 0.105 0.9 CD4_TCM L2
ENSG00000112378 PERP 994025 sc-eQTL 2.93e-01 0.139 0.132 0.9 CD4_TCM L2
ENSG00000112406 HECA -33636 sc-eQTL 9.29e-02 0.19 0.113 0.9 CD4_TCM L2
ENSG00000135597 REPS1 113183 sc-eQTL 2.25e-01 0.13 0.107 0.9 CD4_TCM L2
ENSG00000146386 ABRACL 72699 sc-eQTL 1.59e-02 -0.198 0.0815 0.9 CD4_TCM L2
ENSG00000164442 CITED2 -273204 sc-eQTL 9.89e-01 0.0017 0.123 0.9 CD4_TCM L2
ENSG00000231329 AL031772.1 -138209 sc-eQTL 8.37e-02 0.229 0.132 0.9 CD4_TCM L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.01e-01 0.207 0.162 0.9 CD4_TEM L2
ENSG00000051620 HEBP2 697913 sc-eQTL 7.61e-01 -0.0336 0.111 0.9 CD4_TEM L2
ENSG00000112378 PERP 994025 sc-eQTL 8.83e-01 0.0189 0.129 0.9 CD4_TEM L2
ENSG00000112406 HECA -33636 sc-eQTL 7.18e-01 0.0456 0.126 0.9 CD4_TEM L2
ENSG00000135597 REPS1 113183 sc-eQTL 4.34e-01 -0.108 0.137 0.9 CD4_TEM L2
ENSG00000146386 ABRACL 72699 sc-eQTL 2.72e-02 -0.216 0.097 0.9 CD4_TEM L2
ENSG00000164442 CITED2 -273204 sc-eQTL 3.47e-01 -0.121 0.129 0.9 CD4_TEM L2
ENSG00000231329 AL031772.1 -138209 sc-eQTL 5.03e-01 0.0904 0.135 0.9 CD4_TEM L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 3.24e-01 0.161 0.163 0.9 CD8_CTL L2
ENSG00000051620 HEBP2 697913 sc-eQTL 9.18e-01 -0.012 0.117 0.9 CD8_CTL L2
ENSG00000112378 PERP 994025 sc-eQTL 7.40e-02 0.26 0.145 0.9 CD8_CTL L2
ENSG00000112406 HECA -33636 sc-eQTL 4.89e-01 0.0824 0.119 0.9 CD8_CTL L2
ENSG00000135597 REPS1 113183 sc-eQTL 9.28e-02 -0.214 0.127 0.9 CD8_CTL L2
ENSG00000146386 ABRACL 72699 sc-eQTL 6.80e-04 -0.346 0.1 0.9 CD8_CTL L2
ENSG00000164442 CITED2 -273204 sc-eQTL 1.84e-01 -0.16 0.12 0.9 CD8_CTL L2
ENSG00000231329 AL031772.1 -138209 sc-eQTL 2.15e-02 0.33 0.142 0.9 CD8_CTL L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 1.09e-01 0.253 0.158 0.9 CD8_Naive L2
ENSG00000051620 HEBP2 697913 sc-eQTL 2.23e-01 0.123 0.101 0.9 CD8_Naive L2
ENSG00000112378 PERP 994025 sc-eQTL 8.04e-01 0.0302 0.122 0.9 CD8_Naive L2
ENSG00000112406 HECA -33636 sc-eQTL 5.17e-01 0.0794 0.122 0.9 CD8_Naive L2
ENSG00000135597 REPS1 113183 sc-eQTL 8.84e-01 -0.018 0.123 0.9 CD8_Naive L2
ENSG00000146386 ABRACL 72699 sc-eQTL 3.34e-01 -0.0622 0.0642 0.9 CD8_Naive L2
ENSG00000164442 CITED2 -273204 sc-eQTL 6.58e-01 0.0577 0.13 0.9 CD8_Naive L2
ENSG00000231329 AL031772.1 -138209 sc-eQTL 1.74e-01 0.202 0.148 0.9 CD8_Naive L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 9.87e-01 -0.00294 0.174 0.9 CD8_TCM L2
ENSG00000051620 HEBP2 697913 sc-eQTL 8.18e-01 0.0282 0.122 0.9 CD8_TCM L2
ENSG00000112378 PERP 994025 sc-eQTL 8.85e-01 -0.0235 0.162 0.9 CD8_TCM L2
ENSG00000112406 HECA -33636 sc-eQTL 6.99e-01 0.0493 0.127 0.9 CD8_TCM L2
ENSG00000135597 REPS1 113183 sc-eQTL 1.73e-01 -0.18 0.132 0.9 CD8_TCM L2
ENSG00000146386 ABRACL 72699 sc-eQTL 1.77e-01 -0.178 0.131 0.9 CD8_TCM L2
ENSG00000164442 CITED2 -273204 sc-eQTL 9.99e-01 0.000252 0.136 0.9 CD8_TCM L2
ENSG00000231329 AL031772.1 -138209 sc-eQTL 2.08e-01 -0.18 0.143 0.9 CD8_TCM L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 4.72e-01 0.116 0.161 0.895 CD8_TEM L2
ENSG00000051620 HEBP2 697913 sc-eQTL 1.26e-01 -0.224 0.145 0.895 CD8_TEM L2
ENSG00000112378 PERP 994025 sc-eQTL 3.56e-02 0.349 0.165 0.895 CD8_TEM L2
ENSG00000112406 HECA -33636 sc-eQTL 4.63e-02 0.299 0.149 0.895 CD8_TEM L2
ENSG00000135597 REPS1 113183 sc-eQTL 7.01e-01 0.0603 0.157 0.895 CD8_TEM L2
ENSG00000146386 ABRACL 72699 sc-eQTL 5.54e-01 -0.0716 0.121 0.895 CD8_TEM L2
ENSG00000164442 CITED2 -273204 sc-eQTL 5.41e-01 -0.0804 0.131 0.895 CD8_TEM L2
ENSG00000231329 AL031772.1 -138209 sc-eQTL 1.78e-01 0.201 0.149 0.895 CD8_TEM L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.76e-01 0.185 0.17 0.898 MAIT L2
ENSG00000051620 HEBP2 697913 sc-eQTL 3.77e-01 0.104 0.118 0.898 MAIT L2
ENSG00000112378 PERP 994025 sc-eQTL 6.38e-01 0.0734 0.156 0.898 MAIT L2
ENSG00000112406 HECA -33636 sc-eQTL 7.72e-01 -0.0375 0.129 0.898 MAIT L2
ENSG00000135597 REPS1 113183 sc-eQTL 2.54e-01 0.159 0.139 0.898 MAIT L2
ENSG00000146386 ABRACL 72699 sc-eQTL 3.21e-01 -0.101 0.102 0.898 MAIT L2
ENSG00000164442 CITED2 -273204 sc-eQTL 3.27e-02 -0.256 0.119 0.898 MAIT L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 7.99e-02 0.277 0.158 0.9 NK_CD56bright L2
ENSG00000051620 HEBP2 697913 sc-eQTL 1.91e-01 0.177 0.135 0.9 NK_CD56bright L2
ENSG00000112378 PERP 994025 sc-eQTL 8.32e-01 0.0306 0.145 0.9 NK_CD56bright L2
ENSG00000112406 HECA -33636 sc-eQTL 1.83e-01 0.192 0.143 0.9 NK_CD56bright L2
ENSG00000135597 REPS1 113183 sc-eQTL 2.83e-01 -0.144 0.134 0.9 NK_CD56bright L2
ENSG00000146386 ABRACL 72699 sc-eQTL 1.95e-01 -0.16 0.123 0.9 NK_CD56bright L2
ENSG00000164442 CITED2 -273204 sc-eQTL 5.32e-01 -0.083 0.133 0.9 NK_CD56bright L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 5.10e-01 -0.0956 0.145 0.899 NK_CD56dim L2
ENSG00000051620 HEBP2 697913 sc-eQTL 7.29e-01 0.0446 0.129 0.899 NK_CD56dim L2
ENSG00000112378 PERP 994025 sc-eQTL 3.22e-01 0.114 0.115 0.899 NK_CD56dim L2
ENSG00000112406 HECA -33636 sc-eQTL 8.06e-02 0.217 0.124 0.899 NK_CD56dim L2
ENSG00000135597 REPS1 113183 sc-eQTL 1.89e-01 0.155 0.118 0.899 NK_CD56dim L2
ENSG00000146386 ABRACL 72699 sc-eQTL 1.03e-02 -0.204 0.0788 0.899 NK_CD56dim L2
ENSG00000164442 CITED2 -273204 sc-eQTL 5.93e-01 0.0571 0.107 0.899 NK_CD56dim L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 5.17e-01 -0.11 0.169 0.902 NK_HLA L2
ENSG00000051620 HEBP2 697913 sc-eQTL 9.01e-02 0.243 0.143 0.902 NK_HLA L2
ENSG00000112378 PERP 994025 sc-eQTL 4.78e-01 -0.091 0.128 0.902 NK_HLA L2
ENSG00000112406 HECA -33636 sc-eQTL 1.09e-01 0.253 0.157 0.902 NK_HLA L2
ENSG00000135597 REPS1 113183 sc-eQTL 2.44e-01 0.182 0.155 0.902 NK_HLA L2
ENSG00000146386 ABRACL 72699 sc-eQTL 2.17e-01 -0.158 0.128 0.902 NK_HLA L2
ENSG00000164442 CITED2 -273204 sc-eQTL 6.76e-01 -0.0574 0.137 0.902 NK_HLA L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.64e-02 0.329 0.147 0.899 NK_cytokine L2
ENSG00000051620 HEBP2 697913 sc-eQTL 2.30e-01 0.154 0.128 0.899 NK_cytokine L2
ENSG00000112378 PERP 994025 sc-eQTL 8.22e-01 -0.027 0.12 0.899 NK_cytokine L2
ENSG00000112406 HECA -33636 sc-eQTL 4.43e-01 0.0985 0.128 0.899 NK_cytokine L2
ENSG00000135597 REPS1 113183 sc-eQTL 9.35e-01 -0.0108 0.133 0.899 NK_cytokine L2
ENSG00000146386 ABRACL 72699 sc-eQTL 1.07e-02 -0.217 0.0841 0.899 NK_cytokine L2
ENSG00000164442 CITED2 -273204 sc-eQTL 5.72e-01 -0.0631 0.111 0.899 NK_cytokine L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.92e-01 -0.202 0.191 0.911 PB L2
ENSG00000051620 HEBP2 697913 sc-eQTL 9.53e-01 0.01 0.171 0.911 PB L2
ENSG00000112378 PERP 994025 sc-eQTL 6.84e-01 0.0529 0.13 0.911 PB L2
ENSG00000112406 HECA -33636 sc-eQTL 2.22e-01 -0.255 0.208 0.911 PB L2
ENSG00000135597 REPS1 113183 sc-eQTL 4.55e-01 0.139 0.185 0.911 PB L2
ENSG00000146386 ABRACL 72699 sc-eQTL 2.72e-02 -0.285 0.127 0.911 PB L2
ENSG00000164440 TXLNB -190554 sc-eQTL 5.53e-01 -0.113 0.189 0.911 PB L2
ENSG00000164442 CITED2 -273204 sc-eQTL 7.91e-01 0.038 0.143 0.911 PB L2
ENSG00000226571 AL592429.2 -169918 sc-eQTL 3.66e-01 -0.173 0.191 0.911 PB L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.25e-01 0.201 0.165 0.9 Pro_T L2
ENSG00000051620 HEBP2 697913 sc-eQTL 7.27e-01 -0.0462 0.132 0.9 Pro_T L2
ENSG00000112378 PERP 994025 sc-eQTL 9.38e-01 -0.00955 0.122 0.9 Pro_T L2
ENSG00000112406 HECA -33636 sc-eQTL 2.54e-02 -0.29 0.129 0.9 Pro_T L2
ENSG00000135597 REPS1 113183 sc-eQTL 2.64e-01 -0.172 0.153 0.9 Pro_T L2
ENSG00000146386 ABRACL 72699 sc-eQTL 4.36e-03 -0.28 0.0971 0.9 Pro_T L2
ENSG00000164442 CITED2 -273204 sc-eQTL 8.50e-01 0.0224 0.118 0.9 Pro_T L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 3.23e-02 0.328 0.152 0.9 Treg L2
ENSG00000051620 HEBP2 697913 sc-eQTL 8.41e-01 0.0211 0.105 0.9 Treg L2
ENSG00000112378 PERP 994025 sc-eQTL 6.66e-01 -0.0714 0.165 0.9 Treg L2
ENSG00000112406 HECA -33636 sc-eQTL 1.48e-01 0.185 0.127 0.9 Treg L2
ENSG00000135597 REPS1 113183 sc-eQTL 8.09e-01 -0.0319 0.132 0.9 Treg L2
ENSG00000146386 ABRACL 72699 sc-eQTL 4.70e-02 -0.223 0.112 0.9 Treg L2
ENSG00000164442 CITED2 -273204 sc-eQTL 1.86e-01 -0.166 0.125 0.9 Treg L2
ENSG00000231329 AL031772.1 -138209 sc-eQTL 6.23e-01 -0.0707 0.144 0.9 Treg L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 8.12e-03 0.391 0.146 0.893 cDC L2
ENSG00000051620 HEBP2 697913 sc-eQTL 2.13e-01 0.133 0.106 0.893 cDC L2
ENSG00000112406 HECA -33636 sc-eQTL 3.11e-01 0.144 0.141 0.893 cDC L2
ENSG00000135540 NHSL1 408873 sc-eQTL 8.16e-01 -0.0322 0.138 0.893 cDC L2
ENSG00000135597 REPS1 113183 sc-eQTL 9.15e-01 0.017 0.16 0.893 cDC L2
ENSG00000146386 ABRACL 72699 sc-eQTL 5.23e-02 -0.252 0.129 0.893 cDC L2
ENSG00000164442 CITED2 -273204 sc-eQTL 5.30e-01 -0.0869 0.138 0.893 cDC L2
ENSG00000225177 AL590617.2 408896 sc-eQTL 2.66e-01 0.17 0.152 0.893 cDC L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 8.45e-02 0.205 0.118 0.9 cMono_IL1B L2
ENSG00000051620 HEBP2 697913 sc-eQTL 9.43e-01 -0.00614 0.0855 0.9 cMono_IL1B L2
ENSG00000112406 HECA -33636 sc-eQTL 6.30e-02 0.182 0.0975 0.9 cMono_IL1B L2
ENSG00000135540 NHSL1 408873 sc-eQTL 9.79e-01 -0.00376 0.143 0.9 cMono_IL1B L2
ENSG00000135597 REPS1 113183 sc-eQTL 2.19e-01 -0.157 0.127 0.9 cMono_IL1B L2
ENSG00000146386 ABRACL 72699 sc-eQTL 1.32e-01 -0.162 0.107 0.9 cMono_IL1B L2
ENSG00000164442 CITED2 -273204 sc-eQTL 5.70e-01 -0.064 0.112 0.9 cMono_IL1B L2
ENSG00000225177 AL590617.2 408896 sc-eQTL 1.16e-01 0.235 0.149 0.9 cMono_IL1B L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 9.98e-02 0.226 0.137 0.9 cMono_S100A L2
ENSG00000051620 HEBP2 697913 sc-eQTL 8.13e-01 -0.0222 0.094 0.9 cMono_S100A L2
ENSG00000112406 HECA -33636 sc-eQTL 7.55e-01 0.0362 0.116 0.9 cMono_S100A L2
ENSG00000135540 NHSL1 408873 sc-eQTL 6.91e-01 0.0585 0.147 0.9 cMono_S100A L2
ENSG00000135597 REPS1 113183 sc-eQTL 1.50e-01 0.2 0.139 0.9 cMono_S100A L2
ENSG00000146386 ABRACL 72699 sc-eQTL 3.29e-02 -0.257 0.12 0.9 cMono_S100A L2
ENSG00000164442 CITED2 -273204 sc-eQTL 3.95e-01 -0.102 0.12 0.9 cMono_S100A L2
ENSG00000225177 AL590617.2 408896 sc-eQTL 3.37e-01 0.155 0.161 0.9 cMono_S100A L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 5.28e-01 -0.113 0.179 0.894 gdT L2
ENSG00000051620 HEBP2 697913 sc-eQTL 9.04e-01 0.0207 0.171 0.894 gdT L2
ENSG00000112378 PERP 994025 sc-eQTL 8.33e-01 -0.0335 0.159 0.894 gdT L2
ENSG00000112406 HECA -33636 sc-eQTL 2.82e-01 -0.183 0.169 0.894 gdT L2
ENSG00000135597 REPS1 113183 sc-eQTL 9.40e-02 0.294 0.174 0.894 gdT L2
ENSG00000146386 ABRACL 72699 sc-eQTL 8.73e-01 0.0212 0.132 0.894 gdT L2
ENSG00000164442 CITED2 -273204 sc-eQTL 3.85e-01 0.133 0.152 0.894 gdT L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 8.91e-02 0.269 0.158 0.9 intMono L2
ENSG00000051620 HEBP2 697913 sc-eQTL 7.21e-01 -0.0381 0.107 0.9 intMono L2
ENSG00000112406 HECA -33636 sc-eQTL 5.57e-01 -0.0766 0.13 0.9 intMono L2
ENSG00000135540 NHSL1 408873 sc-eQTL 5.55e-01 0.0849 0.144 0.9 intMono L2
ENSG00000135597 REPS1 113183 sc-eQTL 7.98e-01 -0.0381 0.148 0.9 intMono L2
ENSG00000146386 ABRACL 72699 sc-eQTL 1.69e-01 -0.186 0.135 0.9 intMono L2
ENSG00000164442 CITED2 -273204 sc-eQTL 1.06e-01 -0.212 0.131 0.9 intMono L2
ENSG00000225177 AL590617.2 408896 sc-eQTL 1.74e-01 0.219 0.16 0.9 intMono L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 3.53e-01 0.138 0.148 0.9 ncMono L2
ENSG00000051620 HEBP2 697913 sc-eQTL 3.37e-01 0.0851 0.0883 0.9 ncMono L2
ENSG00000112406 HECA -33636 sc-eQTL 4.88e-01 0.0942 0.135 0.9 ncMono L2
ENSG00000135540 NHSL1 408873 sc-eQTL 1.75e-01 0.193 0.142 0.9 ncMono L2
ENSG00000135597 REPS1 113183 sc-eQTL 8.10e-01 0.0258 0.107 0.9 ncMono L2
ENSG00000146386 ABRACL 72699 sc-eQTL 2.99e-02 -0.28 0.128 0.9 ncMono L2
ENSG00000164442 CITED2 -273204 sc-eQTL 6.12e-01 -0.0558 0.11 0.9 ncMono L2
ENSG00000225177 AL590617.2 408896 sc-eQTL 6.99e-01 -0.0613 0.158 0.9 ncMono L2
ENSG00000024862 CCDC28A 327935 sc-eQTL 5.75e-01 0.0945 0.168 0.898 pDC L2
ENSG00000051620 HEBP2 697913 sc-eQTL 7.63e-01 0.0397 0.131 0.898 pDC L2
ENSG00000112406 HECA -33636 sc-eQTL 5.39e-01 0.0878 0.143 0.898 pDC L2
ENSG00000135540 NHSL1 408873 sc-eQTL 6.66e-01 -0.0564 0.13 0.898 pDC L2
ENSG00000135597 REPS1 113183 sc-eQTL 9.56e-01 -0.00732 0.132 0.898 pDC L2
ENSG00000146386 ABRACL 72699 sc-eQTL 5.20e-01 -0.093 0.144 0.898 pDC L2
ENSG00000164442 CITED2 -273204 sc-eQTL 8.01e-01 -0.0429 0.17 0.898 pDC L2
ENSG00000225177 AL590617.2 408896 sc-eQTL 6.75e-02 0.239 0.13 0.898 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 327935 sc-eQTL 1.19e-01 0.227 0.145 0.9 B_Memory LOneK1K
ENSG00000051620 HEBP2 697913 sc-eQTL 8.59e-01 -0.018 0.101 0.9 B_Memory LOneK1K
ENSG00000112378 PERP 994025 sc-eQTL 7.35e-01 0.045 0.133 0.9 B_Memory LOneK1K
ENSG00000112406 HECA -33636 sc-eQTL 2.83e-01 0.139 0.129 0.9 B_Memory LOneK1K
ENSG00000135597 REPS1 113183 sc-eQTL 4.99e-01 0.0909 0.134 0.9 B_Memory LOneK1K
ENSG00000146386 ABRACL 72699 sc-eQTL 4.74e-01 -0.0667 0.093 0.9 B_Memory LOneK1K
ENSG00000164440 TXLNB -190554 sc-eQTL 7.80e-01 -0.043 0.154 0.9 B_Memory LOneK1K
ENSG00000164442 CITED2 -273204 sc-eQTL 8.61e-01 -0.0229 0.131 0.9 B_Memory LOneK1K
ENSG00000226571 AL592429.2 -169918 sc-eQTL 1.04e-01 -0.247 0.151 0.9 B_Memory LOneK1K
ENSG00000024862 CCDC28A 327935 sc-eQTL 1.47e-01 0.199 0.137 0.9 B_Naive LOneK1K
ENSG00000051620 HEBP2 697913 sc-eQTL 7.23e-01 -0.0339 0.0955 0.9 B_Naive LOneK1K
ENSG00000112378 PERP 994025 sc-eQTL 1.24e-01 0.215 0.139 0.9 B_Naive LOneK1K
ENSG00000112406 HECA -33636 sc-eQTL 4.21e-01 -0.104 0.129 0.9 B_Naive LOneK1K
ENSG00000135597 REPS1 113183 sc-eQTL 9.11e-01 0.0123 0.11 0.9 B_Naive LOneK1K
ENSG00000146386 ABRACL 72699 sc-eQTL 9.99e-01 -8.02e-05 0.077 0.9 B_Naive LOneK1K
ENSG00000164440 TXLNB -190554 sc-eQTL 3.70e-01 0.145 0.161 0.9 B_Naive LOneK1K
ENSG00000164442 CITED2 -273204 sc-eQTL 3.75e-01 0.104 0.117 0.9 B_Naive LOneK1K
ENSG00000226571 AL592429.2 -169918 sc-eQTL 2.74e-01 -0.151 0.137 0.9 B_Naive LOneK1K
ENSG00000024862 CCDC28A 327935 sc-eQTL 2.41e-02 0.248 0.109 0.9 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 697913 sc-eQTL 7.77e-01 -0.0233 0.0823 0.9 CD14_Mono LOneK1K
ENSG00000112406 HECA -33636 sc-eQTL 1.49e-01 0.143 0.0986 0.9 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 408873 sc-eQTL 6.60e-01 0.0638 0.145 0.9 CD14_Mono LOneK1K
ENSG00000135597 REPS1 113183 sc-eQTL 8.70e-01 -0.0195 0.119 0.9 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 72699 sc-eQTL 7.45e-02 -0.189 0.105 0.9 CD14_Mono LOneK1K
ENSG00000164442 CITED2 -273204 sc-eQTL 5.47e-01 -0.07 0.116 0.9 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 408896 sc-eQTL 9.00e-02 0.263 0.154 0.9 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 327935 sc-eQTL 1.40e-01 0.219 0.148 0.899 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 697913 sc-eQTL 5.97e-01 0.042 0.0792 0.899 CD16_Mono LOneK1K
ENSG00000112406 HECA -33636 sc-eQTL 9.92e-01 -0.00131 0.127 0.899 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 408873 sc-eQTL 7.09e-02 0.254 0.14 0.899 CD16_Mono LOneK1K
ENSG00000135597 REPS1 113183 sc-eQTL 8.94e-01 -0.0117 0.0877 0.899 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 72699 sc-eQTL 6.00e-02 -0.241 0.127 0.899 CD16_Mono LOneK1K
ENSG00000164442 CITED2 -273204 sc-eQTL 2.99e-01 -0.115 0.11 0.899 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 408896 sc-eQTL 9.25e-01 -0.0146 0.156 0.899 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 327935 sc-eQTL 7.68e-01 0.0408 0.138 0.899 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 697913 sc-eQTL 2.38e-01 0.142 0.12 0.899 NK_CD56dim LOneK1K
ENSG00000112378 PERP 994025 sc-eQTL 7.73e-01 0.0293 0.101 0.899 NK_CD56dim LOneK1K
ENSG00000112406 HECA -33636 sc-eQTL 1.44e-01 0.172 0.117 0.899 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 113183 sc-eQTL 5.14e-01 0.0753 0.115 0.899 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 72699 sc-eQTL 3.01e-03 -0.219 0.0729 0.899 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 -273204 sc-eQTL 9.76e-01 0.0033 0.108 0.899 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000024862 CCDC28A 327935 eQTL 0.0495 0.05 0.0254 0.0 0.0 0.111
ENSG00000112406 HECA -33636 eQTL 6.05e-06 -0.0685 0.0151 0.0 0.0 0.111
ENSG00000146386 ABRACL 72699 eQTL 2.5e-05 -0.156 0.0367 0.0 0.0 0.111

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112406 HECA -33636 1.11e-05 1.18e-05 1.96e-06 6.74e-06 2.34e-06 5.49e-06 1.31e-05 2.18e-06 9.97e-06 5.58e-06 1.38e-05 5.9e-06 1.82e-05 3.99e-06 3.54e-06 6.61e-06 5.49e-06 8.89e-06 2.95e-06 2.95e-06 6.31e-06 1.05e-05 1.02e-05 3.69e-06 1.75e-05 4.4e-06 5.53e-06 4.73e-06 1.29e-05 1.16e-05 6.43e-06 1e-06 1.19e-06 3.7e-06 4.96e-06 2.8e-06 1.84e-06 2e-06 2.03e-06 1.21e-06 9.79e-07 1.4e-05 1.54e-06 1.95e-07 9.54e-07 1.74e-06 1.73e-06 6.58e-07 4.65e-07