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Genes within 1Mb (chr6:139034603:TC:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 261094 sc-eQTL 6.88e-04 0.24 0.0697 0.615 B L1
ENSG00000051620 HEBP2 631072 sc-eQTL 7.42e-01 -0.018 0.0547 0.615 B L1
ENSG00000112378 PERP 927184 sc-eQTL 4.11e-01 0.0449 0.0545 0.615 B L1
ENSG00000112406 HECA -100477 sc-eQTL 2.40e-02 -0.157 0.0688 0.615 B L1
ENSG00000135597 REPS1 46342 sc-eQTL 1.17e-01 0.0963 0.0612 0.615 B L1
ENSG00000146386 ABRACL 5858 sc-eQTL 2.52e-01 0.0414 0.0361 0.615 B L1
ENSG00000164440 TXLNB -257395 sc-eQTL 7.55e-01 -0.0277 0.0886 0.615 B L1
ENSG00000164442 CITED2 -340045 sc-eQTL 4.29e-01 0.0441 0.0557 0.615 B L1
ENSG00000226571 AL592429.2 -236759 sc-eQTL 6.14e-01 0.0313 0.062 0.615 B L1
ENSG00000024862 CCDC28A 261094 sc-eQTL 6.30e-04 0.271 0.0781 0.615 CD4T L1
ENSG00000051620 HEBP2 631072 sc-eQTL 3.23e-01 0.0532 0.0537 0.615 CD4T L1
ENSG00000112378 PERP 927184 sc-eQTL 1.17e-01 0.0794 0.0505 0.615 CD4T L1
ENSG00000112406 HECA -100477 sc-eQTL 1.40e-01 -0.0987 0.0666 0.615 CD4T L1
ENSG00000135597 REPS1 46342 sc-eQTL 6.61e-01 -0.0231 0.0526 0.615 CD4T L1
ENSG00000146386 ABRACL 5858 sc-eQTL 1.47e-11 -0.247 0.0346 0.615 CD4T L1
ENSG00000164442 CITED2 -340045 sc-eQTL 3.96e-01 -0.056 0.0658 0.615 CD4T L1
ENSG00000231329 AL031772.1 -205050 sc-eQTL 9.94e-01 0.000472 0.065 0.615 CD4T L1
ENSG00000024862 CCDC28A 261094 sc-eQTL 3.17e-04 0.308 0.084 0.615 CD8T L1
ENSG00000051620 HEBP2 631072 sc-eQTL 9.53e-01 0.00332 0.0568 0.615 CD8T L1
ENSG00000112378 PERP 927184 sc-eQTL 1.53e-01 0.0824 0.0575 0.615 CD8T L1
ENSG00000112406 HECA -100477 sc-eQTL 2.94e-01 -0.0651 0.0619 0.615 CD8T L1
ENSG00000135597 REPS1 46342 sc-eQTL 4.66e-01 0.0425 0.0583 0.615 CD8T L1
ENSG00000146386 ABRACL 5858 sc-eQTL 1.28e-09 -0.193 0.0304 0.615 CD8T L1
ENSG00000164442 CITED2 -340045 sc-eQTL 4.79e-01 -0.0447 0.063 0.615 CD8T L1
ENSG00000231329 AL031772.1 -205050 sc-eQTL 6.10e-01 0.0391 0.0766 0.615 CD8T L1
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.02e-01 0.146 0.0887 0.615 DC L1
ENSG00000051620 HEBP2 631072 sc-eQTL 5.39e-01 -0.0386 0.0627 0.615 DC L1
ENSG00000112406 HECA -100477 sc-eQTL 7.49e-01 0.0236 0.0735 0.615 DC L1
ENSG00000135540 NHSL1 342032 sc-eQTL 7.35e-01 0.0278 0.0818 0.615 DC L1
ENSG00000135597 REPS1 46342 sc-eQTL 3.16e-03 0.212 0.0708 0.615 DC L1
ENSG00000146386 ABRACL 5858 sc-eQTL 1.75e-03 -0.219 0.0692 0.615 DC L1
ENSG00000164442 CITED2 -340045 sc-eQTL 8.00e-01 -0.0213 0.0841 0.615 DC L1
ENSG00000225177 AL590617.2 342055 sc-eQTL 4.90e-01 0.059 0.0855 0.615 DC L1
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.07e-01 0.103 0.0635 0.615 Mono L1
ENSG00000051620 HEBP2 631072 sc-eQTL 9.95e-01 0.000299 0.0442 0.615 Mono L1
ENSG00000112406 HECA -100477 sc-eQTL 4.25e-01 -0.0466 0.0583 0.615 Mono L1
ENSG00000135540 NHSL1 342032 sc-eQTL 6.48e-02 0.154 0.0829 0.615 Mono L1
ENSG00000135597 REPS1 46342 sc-eQTL 3.05e-02 0.105 0.0484 0.615 Mono L1
ENSG00000146386 ABRACL 5858 sc-eQTL 4.07e-12 -0.418 0.0568 0.615 Mono L1
ENSG00000164442 CITED2 -340045 sc-eQTL 8.74e-02 -0.115 0.0669 0.615 Mono L1
ENSG00000225177 AL590617.2 342055 sc-eQTL 6.30e-01 0.0419 0.0868 0.615 Mono L1
ENSG00000024862 CCDC28A 261094 sc-eQTL 3.67e-01 0.0692 0.0765 0.614 NK L1
ENSG00000051620 HEBP2 631072 sc-eQTL 3.28e-01 -0.066 0.0673 0.614 NK L1
ENSG00000112378 PERP 927184 sc-eQTL 1.40e-01 0.0844 0.057 0.614 NK L1
ENSG00000112406 HECA -100477 sc-eQTL 9.99e-01 -8.45e-05 0.0662 0.614 NK L1
ENSG00000135597 REPS1 46342 sc-eQTL 4.61e-01 0.0465 0.063 0.614 NK L1
ENSG00000146386 ABRACL 5858 sc-eQTL 5.72e-12 -0.3 0.0411 0.614 NK L1
ENSG00000164442 CITED2 -340045 sc-eQTL 6.79e-01 -0.0253 0.0612 0.614 NK L1
ENSG00000024862 CCDC28A 261094 sc-eQTL 5.84e-01 0.052 0.0947 0.615 Other_T L1
ENSG00000051620 HEBP2 631072 sc-eQTL 8.08e-01 -0.0149 0.0612 0.615 Other_T L1
ENSG00000112378 PERP 927184 sc-eQTL 7.32e-02 0.135 0.075 0.615 Other_T L1
ENSG00000112406 HECA -100477 sc-eQTL 4.37e-02 -0.138 0.068 0.615 Other_T L1
ENSG00000135597 REPS1 46342 sc-eQTL 1.14e-01 -0.116 0.0734 0.615 Other_T L1
ENSG00000146386 ABRACL 5858 sc-eQTL 1.30e-05 -0.206 0.0462 0.615 Other_T L1
ENSG00000164442 CITED2 -340045 sc-eQTL 3.67e-01 -0.0511 0.0565 0.615 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 261094 sc-eQTL 8.12e-01 -0.0242 0.102 0.622 B_Activated L2
ENSG00000051620 HEBP2 631072 sc-eQTL 7.31e-01 0.0307 0.0892 0.622 B_Activated L2
ENSG00000112378 PERP 927184 sc-eQTL 7.14e-01 0.017 0.0463 0.622 B_Activated L2
ENSG00000112406 HECA -100477 sc-eQTL 6.12e-01 0.0492 0.0969 0.622 B_Activated L2
ENSG00000135597 REPS1 46342 sc-eQTL 9.74e-01 -0.00331 0.102 0.622 B_Activated L2
ENSG00000146386 ABRACL 5858 sc-eQTL 3.27e-01 -0.0901 0.0916 0.622 B_Activated L2
ENSG00000164440 TXLNB -257395 sc-eQTL 5.35e-01 -0.0488 0.0786 0.622 B_Activated L2
ENSG00000164442 CITED2 -340045 sc-eQTL 4.64e-02 -0.196 0.0978 0.622 B_Activated L2
ENSG00000226571 AL592429.2 -236759 sc-eQTL 1.14e-01 -0.156 0.0982 0.622 B_Activated L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 2.71e-01 0.0981 0.0889 0.616 B_Intermediate L2
ENSG00000051620 HEBP2 631072 sc-eQTL 6.32e-01 -0.0296 0.0617 0.616 B_Intermediate L2
ENSG00000112378 PERP 927184 sc-eQTL 5.58e-01 0.0461 0.0786 0.616 B_Intermediate L2
ENSG00000112406 HECA -100477 sc-eQTL 8.70e-01 -0.0127 0.0773 0.616 B_Intermediate L2
ENSG00000135597 REPS1 46342 sc-eQTL 5.30e-01 -0.0523 0.0833 0.616 B_Intermediate L2
ENSG00000146386 ABRACL 5858 sc-eQTL 3.71e-01 -0.0635 0.0708 0.616 B_Intermediate L2
ENSG00000164440 TXLNB -257395 sc-eQTL 7.99e-01 -0.0222 0.0869 0.616 B_Intermediate L2
ENSG00000164442 CITED2 -340045 sc-eQTL 9.32e-01 -0.00687 0.08 0.616 B_Intermediate L2
ENSG00000226571 AL592429.2 -236759 sc-eQTL 6.98e-01 0.0337 0.0866 0.616 B_Intermediate L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.30e-02 0.222 0.0886 0.614 B_Memory L2
ENSG00000051620 HEBP2 631072 sc-eQTL 7.25e-01 -0.0239 0.0676 0.614 B_Memory L2
ENSG00000112378 PERP 927184 sc-eQTL 7.48e-01 -0.0271 0.0843 0.614 B_Memory L2
ENSG00000112406 HECA -100477 sc-eQTL 4.42e-02 -0.156 0.077 0.614 B_Memory L2
ENSG00000135597 REPS1 46342 sc-eQTL 8.00e-01 -0.0214 0.0843 0.614 B_Memory L2
ENSG00000146386 ABRACL 5858 sc-eQTL 8.93e-03 -0.173 0.0656 0.614 B_Memory L2
ENSG00000164440 TXLNB -257395 sc-eQTL 4.43e-01 0.0652 0.0849 0.614 B_Memory L2
ENSG00000164442 CITED2 -340045 sc-eQTL 1.91e-01 -0.102 0.0778 0.614 B_Memory L2
ENSG00000226571 AL592429.2 -236759 sc-eQTL 9.66e-01 0.00409 0.0959 0.614 B_Memory L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 4.19e-01 0.0684 0.0844 0.615 B_Naive1 L2
ENSG00000051620 HEBP2 631072 sc-eQTL 7.03e-01 -0.0227 0.0594 0.615 B_Naive1 L2
ENSG00000112378 PERP 927184 sc-eQTL 9.35e-01 0.00662 0.0806 0.615 B_Naive1 L2
ENSG00000112406 HECA -100477 sc-eQTL 5.21e-03 -0.204 0.0724 0.615 B_Naive1 L2
ENSG00000135597 REPS1 46342 sc-eQTL 1.13e-01 0.108 0.0678 0.615 B_Naive1 L2
ENSG00000146386 ABRACL 5858 sc-eQTL 1.30e-02 0.118 0.047 0.615 B_Naive1 L2
ENSG00000164440 TXLNB -257395 sc-eQTL 4.50e-01 0.0675 0.0892 0.615 B_Naive1 L2
ENSG00000164442 CITED2 -340045 sc-eQTL 7.22e-02 0.117 0.0645 0.615 B_Naive1 L2
ENSG00000226571 AL592429.2 -236759 sc-eQTL 7.72e-01 0.0247 0.0853 0.615 B_Naive1 L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 3.46e-04 0.295 0.0811 0.614 B_Naive2 L2
ENSG00000051620 HEBP2 631072 sc-eQTL 6.81e-01 -0.0235 0.0572 0.614 B_Naive2 L2
ENSG00000112378 PERP 927184 sc-eQTL 5.04e-01 0.0459 0.0686 0.614 B_Naive2 L2
ENSG00000112406 HECA -100477 sc-eQTL 1.17e-01 -0.123 0.0783 0.614 B_Naive2 L2
ENSG00000135597 REPS1 46342 sc-eQTL 5.85e-01 0.041 0.0751 0.614 B_Naive2 L2
ENSG00000146386 ABRACL 5858 sc-eQTL 6.48e-02 0.102 0.0548 0.614 B_Naive2 L2
ENSG00000164440 TXLNB -257395 sc-eQTL 6.64e-01 -0.0381 0.0875 0.614 B_Naive2 L2
ENSG00000164442 CITED2 -340045 sc-eQTL 5.64e-01 -0.0516 0.0893 0.614 B_Naive2 L2
ENSG00000226571 AL592429.2 -236759 sc-eQTL 6.51e-01 0.0371 0.082 0.614 B_Naive2 L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 2.10e-01 0.11 0.0874 0.623 CD4_CTL L2
ENSG00000051620 HEBP2 631072 sc-eQTL 5.94e-01 -0.0404 0.0758 0.623 CD4_CTL L2
ENSG00000112378 PERP 927184 sc-eQTL 9.40e-01 -0.00694 0.0923 0.623 CD4_CTL L2
ENSG00000112406 HECA -100477 sc-eQTL 3.62e-01 -0.0807 0.0884 0.623 CD4_CTL L2
ENSG00000135597 REPS1 46342 sc-eQTL 8.44e-01 0.0169 0.086 0.623 CD4_CTL L2
ENSG00000146386 ABRACL 5858 sc-eQTL 6.69e-02 -0.143 0.0777 0.623 CD4_CTL L2
ENSG00000164442 CITED2 -340045 sc-eQTL 7.52e-01 0.0249 0.0787 0.623 CD4_CTL L2
ENSG00000231329 AL031772.1 -205050 sc-eQTL 2.96e-01 0.0849 0.081 0.623 CD4_CTL L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 3.46e-03 0.245 0.0828 0.615 CD4_Naive L2
ENSG00000051620 HEBP2 631072 sc-eQTL 1.66e-01 0.073 0.0525 0.615 CD4_Naive L2
ENSG00000112378 PERP 927184 sc-eQTL 6.94e-01 0.0275 0.0696 0.615 CD4_Naive L2
ENSG00000112406 HECA -100477 sc-eQTL 1.42e-01 -0.0962 0.0653 0.615 CD4_Naive L2
ENSG00000135597 REPS1 46342 sc-eQTL 4.22e-01 -0.0468 0.0582 0.615 CD4_Naive L2
ENSG00000146386 ABRACL 5858 sc-eQTL 1.84e-04 -0.144 0.0379 0.615 CD4_Naive L2
ENSG00000164442 CITED2 -340045 sc-eQTL 4.99e-01 -0.045 0.0665 0.615 CD4_Naive L2
ENSG00000231329 AL031772.1 -205050 sc-eQTL 8.40e-01 0.0136 0.0674 0.615 CD4_Naive L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.68e-03 0.26 0.0816 0.615 CD4_TCM L2
ENSG00000051620 HEBP2 631072 sc-eQTL 8.80e-01 -0.00939 0.0622 0.615 CD4_TCM L2
ENSG00000112378 PERP 927184 sc-eQTL 6.65e-01 0.0338 0.0779 0.615 CD4_TCM L2
ENSG00000112406 HECA -100477 sc-eQTL 2.35e-01 -0.0793 0.0666 0.615 CD4_TCM L2
ENSG00000135597 REPS1 46342 sc-eQTL 3.36e-01 -0.061 0.0632 0.615 CD4_TCM L2
ENSG00000146386 ABRACL 5858 sc-eQTL 4.67e-11 -0.305 0.044 0.615 CD4_TCM L2
ENSG00000164442 CITED2 -340045 sc-eQTL 2.18e-01 -0.0892 0.0722 0.615 CD4_TCM L2
ENSG00000231329 AL031772.1 -205050 sc-eQTL 9.86e-01 0.00135 0.0783 0.615 CD4_TCM L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 4.33e-01 0.0731 0.0932 0.615 CD4_TEM L2
ENSG00000051620 HEBP2 631072 sc-eQTL 5.68e-01 0.0364 0.0635 0.615 CD4_TEM L2
ENSG00000112378 PERP 927184 sc-eQTL 1.60e-01 0.104 0.0736 0.615 CD4_TEM L2
ENSG00000112406 HECA -100477 sc-eQTL 3.67e-03 -0.209 0.0712 0.615 CD4_TEM L2
ENSG00000135597 REPS1 46342 sc-eQTL 7.52e-03 0.21 0.0778 0.615 CD4_TEM L2
ENSG00000146386 ABRACL 5858 sc-eQTL 6.21e-09 -0.315 0.0521 0.615 CD4_TEM L2
ENSG00000164442 CITED2 -340045 sc-eQTL 5.27e-01 -0.0469 0.074 0.615 CD4_TEM L2
ENSG00000231329 AL031772.1 -205050 sc-eQTL 8.92e-01 -0.0106 0.0775 0.615 CD4_TEM L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.35e-02 0.229 0.0921 0.615 CD8_CTL L2
ENSG00000051620 HEBP2 631072 sc-eQTL 3.79e-01 -0.0587 0.0666 0.615 CD8_CTL L2
ENSG00000112378 PERP 927184 sc-eQTL 5.20e-01 0.0536 0.0832 0.615 CD8_CTL L2
ENSG00000112406 HECA -100477 sc-eQTL 8.73e-01 -0.0109 0.068 0.615 CD8_CTL L2
ENSG00000135597 REPS1 46342 sc-eQTL 6.55e-01 -0.0326 0.0728 0.615 CD8_CTL L2
ENSG00000146386 ABRACL 5858 sc-eQTL 9.88e-09 -0.325 0.0545 0.615 CD8_CTL L2
ENSG00000164442 CITED2 -340045 sc-eQTL 9.43e-01 0.00489 0.0686 0.615 CD8_CTL L2
ENSG00000231329 AL031772.1 -205050 sc-eQTL 2.37e-01 0.0972 0.0821 0.615 CD8_CTL L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.00e-01 0.15 0.0911 0.615 CD8_Naive L2
ENSG00000051620 HEBP2 631072 sc-eQTL 9.68e-01 0.00239 0.0586 0.615 CD8_Naive L2
ENSG00000112378 PERP 927184 sc-eQTL 4.94e-01 0.0483 0.0704 0.615 CD8_Naive L2
ENSG00000112406 HECA -100477 sc-eQTL 1.14e-01 -0.112 0.0704 0.615 CD8_Naive L2
ENSG00000135597 REPS1 46342 sc-eQTL 2.11e-01 0.0888 0.0707 0.615 CD8_Naive L2
ENSG00000146386 ABRACL 5858 sc-eQTL 1.87e-03 -0.115 0.0364 0.615 CD8_Naive L2
ENSG00000164442 CITED2 -340045 sc-eQTL 5.20e-01 0.0484 0.0752 0.615 CD8_Naive L2
ENSG00000231329 AL031772.1 -205050 sc-eQTL 9.53e-01 0.0051 0.0861 0.615 CD8_Naive L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 5.84e-01 0.0583 0.106 0.616 CD8_TCM L2
ENSG00000051620 HEBP2 631072 sc-eQTL 8.39e-01 -0.0152 0.0747 0.616 CD8_TCM L2
ENSG00000112378 PERP 927184 sc-eQTL 4.53e-01 0.0741 0.0985 0.616 CD8_TCM L2
ENSG00000112406 HECA -100477 sc-eQTL 1.04e-01 -0.126 0.0772 0.616 CD8_TCM L2
ENSG00000135597 REPS1 46342 sc-eQTL 9.05e-01 -0.00969 0.0808 0.616 CD8_TCM L2
ENSG00000146386 ABRACL 5858 sc-eQTL 2.28e-01 -0.097 0.0802 0.616 CD8_TCM L2
ENSG00000164442 CITED2 -340045 sc-eQTL 1.20e-01 -0.128 0.0822 0.616 CD8_TCM L2
ENSG00000231329 AL031772.1 -205050 sc-eQTL 2.41e-01 -0.102 0.087 0.616 CD8_TCM L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 5.02e-02 0.18 0.0916 0.616 CD8_TEM L2
ENSG00000051620 HEBP2 631072 sc-eQTL 7.47e-01 -0.0272 0.084 0.616 CD8_TEM L2
ENSG00000112378 PERP 927184 sc-eQTL 2.59e-01 0.108 0.0955 0.616 CD8_TEM L2
ENSG00000112406 HECA -100477 sc-eQTL 8.31e-01 0.0185 0.0865 0.616 CD8_TEM L2
ENSG00000135597 REPS1 46342 sc-eQTL 8.83e-01 0.0132 0.0901 0.616 CD8_TEM L2
ENSG00000146386 ABRACL 5858 sc-eQTL 4.40e-04 -0.241 0.0673 0.616 CD8_TEM L2
ENSG00000164442 CITED2 -340045 sc-eQTL 5.76e-01 -0.0422 0.0754 0.616 CD8_TEM L2
ENSG00000231329 AL031772.1 -205050 sc-eQTL 3.32e-01 0.0833 0.0856 0.616 CD8_TEM L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 6.85e-01 0.0405 0.0996 0.615 MAIT L2
ENSG00000051620 HEBP2 631072 sc-eQTL 7.99e-01 -0.0176 0.0691 0.615 MAIT L2
ENSG00000112378 PERP 927184 sc-eQTL 6.59e-02 0.168 0.0907 0.615 MAIT L2
ENSG00000112406 HECA -100477 sc-eQTL 4.77e-03 -0.212 0.0743 0.615 MAIT L2
ENSG00000135597 REPS1 46342 sc-eQTL 6.07e-01 -0.0421 0.0815 0.615 MAIT L2
ENSG00000146386 ABRACL 5858 sc-eQTL 7.70e-02 -0.106 0.0595 0.615 MAIT L2
ENSG00000164442 CITED2 -340045 sc-eQTL 2.18e-01 -0.087 0.0704 0.615 MAIT L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 4.91e-01 0.0628 0.091 0.616 NK_CD56bright L2
ENSG00000051620 HEBP2 631072 sc-eQTL 6.66e-01 -0.0335 0.0776 0.616 NK_CD56bright L2
ENSG00000112378 PERP 927184 sc-eQTL 1.08e-01 0.133 0.0825 0.616 NK_CD56bright L2
ENSG00000112406 HECA -100477 sc-eQTL 5.54e-01 -0.0489 0.0825 0.616 NK_CD56bright L2
ENSG00000135597 REPS1 46342 sc-eQTL 4.24e-01 0.0617 0.0769 0.616 NK_CD56bright L2
ENSG00000146386 ABRACL 5858 sc-eQTL 5.72e-02 -0.135 0.0704 0.616 NK_CD56bright L2
ENSG00000164442 CITED2 -340045 sc-eQTL 9.35e-01 -0.00619 0.0762 0.616 NK_CD56bright L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 4.62e-01 -0.061 0.0828 0.616 NK_CD56dim L2
ENSG00000051620 HEBP2 631072 sc-eQTL 2.46e-01 -0.0854 0.0734 0.616 NK_CD56dim L2
ENSG00000112378 PERP 927184 sc-eQTL 2.87e-01 0.0703 0.0658 0.616 NK_CD56dim L2
ENSG00000112406 HECA -100477 sc-eQTL 3.81e-01 0.0625 0.0712 0.616 NK_CD56dim L2
ENSG00000135597 REPS1 46342 sc-eQTL 6.12e-01 0.0343 0.0676 0.616 NK_CD56dim L2
ENSG00000146386 ABRACL 5858 sc-eQTL 1.92e-08 -0.248 0.0424 0.616 NK_CD56dim L2
ENSG00000164442 CITED2 -340045 sc-eQTL 7.56e-01 0.019 0.061 0.616 NK_CD56dim L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 5.43e-01 0.0591 0.0971 0.61 NK_HLA L2
ENSG00000051620 HEBP2 631072 sc-eQTL 7.89e-01 -0.0222 0.0828 0.61 NK_HLA L2
ENSG00000112378 PERP 927184 sc-eQTL 9.71e-01 0.00265 0.0736 0.61 NK_HLA L2
ENSG00000112406 HECA -100477 sc-eQTL 4.67e-01 -0.0661 0.0908 0.61 NK_HLA L2
ENSG00000135597 REPS1 46342 sc-eQTL 8.91e-01 -0.0123 0.0897 0.61 NK_HLA L2
ENSG00000146386 ABRACL 5858 sc-eQTL 1.56e-04 -0.274 0.0711 0.61 NK_HLA L2
ENSG00000164442 CITED2 -340045 sc-eQTL 2.29e-01 0.0946 0.0785 0.61 NK_HLA L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 9.16e-03 0.222 0.0844 0.616 NK_cytokine L2
ENSG00000051620 HEBP2 631072 sc-eQTL 4.90e-01 -0.051 0.0739 0.616 NK_cytokine L2
ENSG00000112378 PERP 927184 sc-eQTL 5.00e-01 -0.0465 0.0688 0.616 NK_cytokine L2
ENSG00000112406 HECA -100477 sc-eQTL 6.73e-02 -0.135 0.0733 0.616 NK_cytokine L2
ENSG00000135597 REPS1 46342 sc-eQTL 2.34e-01 0.0908 0.0761 0.616 NK_cytokine L2
ENSG00000146386 ABRACL 5858 sc-eQTL 3.16e-09 -0.28 0.0452 0.616 NK_cytokine L2
ENSG00000164442 CITED2 -340045 sc-eQTL 5.65e-01 -0.037 0.0641 0.616 NK_cytokine L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 8.24e-01 -0.0236 0.105 0.633 PB L2
ENSG00000051620 HEBP2 631072 sc-eQTL 4.02e-01 0.0786 0.0935 0.633 PB L2
ENSG00000112378 PERP 927184 sc-eQTL 2.60e-01 0.0804 0.071 0.633 PB L2
ENSG00000112406 HECA -100477 sc-eQTL 3.03e-01 -0.118 0.114 0.633 PB L2
ENSG00000135597 REPS1 46342 sc-eQTL 2.73e-02 0.223 0.0998 0.633 PB L2
ENSG00000146386 ABRACL 5858 sc-eQTL 5.24e-01 -0.0455 0.0713 0.633 PB L2
ENSG00000164440 TXLNB -257395 sc-eQTL 8.69e-01 0.0173 0.104 0.633 PB L2
ENSG00000164442 CITED2 -340045 sc-eQTL 7.44e-01 0.0257 0.0785 0.633 PB L2
ENSG00000226571 AL592429.2 -236759 sc-eQTL 5.60e-01 0.0614 0.105 0.633 PB L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 3.27e-01 0.0925 0.0942 0.615 Pro_T L2
ENSG00000051620 HEBP2 631072 sc-eQTL 5.25e-01 -0.0479 0.0752 0.615 Pro_T L2
ENSG00000112378 PERP 927184 sc-eQTL 8.80e-01 -0.0105 0.0696 0.615 Pro_T L2
ENSG00000112406 HECA -100477 sc-eQTL 1.36e-02 -0.182 0.0733 0.615 Pro_T L2
ENSG00000135597 REPS1 46342 sc-eQTL 8.63e-02 -0.15 0.087 0.615 Pro_T L2
ENSG00000146386 ABRACL 5858 sc-eQTL 2.18e-02 -0.129 0.0558 0.615 Pro_T L2
ENSG00000164442 CITED2 -340045 sc-eQTL 6.66e-01 -0.0291 0.0673 0.615 Pro_T L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.69e-01 0.124 0.0897 0.615 Treg L2
ENSG00000051620 HEBP2 631072 sc-eQTL 2.08e-01 0.0774 0.0613 0.615 Treg L2
ENSG00000112378 PERP 927184 sc-eQTL 2.27e-01 0.117 0.0966 0.615 Treg L2
ENSG00000112406 HECA -100477 sc-eQTL 8.17e-01 -0.0174 0.0749 0.615 Treg L2
ENSG00000135597 REPS1 46342 sc-eQTL 9.41e-01 -0.0057 0.0775 0.615 Treg L2
ENSG00000146386 ABRACL 5858 sc-eQTL 1.74e-09 -0.381 0.0606 0.615 Treg L2
ENSG00000164442 CITED2 -340045 sc-eQTL 2.83e-01 -0.079 0.0735 0.615 Treg L2
ENSG00000231329 AL031772.1 -205050 sc-eQTL 9.47e-01 0.00562 0.0843 0.615 Treg L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 9.38e-02 0.149 0.0887 0.612 cDC L2
ENSG00000051620 HEBP2 631072 sc-eQTL 6.44e-01 -0.0297 0.0641 0.612 cDC L2
ENSG00000112406 HECA -100477 sc-eQTL 4.07e-01 0.0706 0.0849 0.612 cDC L2
ENSG00000135540 NHSL1 342032 sc-eQTL 4.28e-01 0.066 0.0831 0.612 cDC L2
ENSG00000135597 REPS1 46342 sc-eQTL 3.61e-01 0.0877 0.0957 0.612 cDC L2
ENSG00000146386 ABRACL 5858 sc-eQTL 7.60e-03 -0.208 0.0769 0.612 cDC L2
ENSG00000164442 CITED2 -340045 sc-eQTL 2.97e-01 -0.0868 0.0829 0.612 cDC L2
ENSG00000225177 AL590617.2 342055 sc-eQTL 9.17e-01 0.00964 0.0918 0.612 cDC L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 2.70e-01 0.0748 0.0677 0.615 cMono_IL1B L2
ENSG00000051620 HEBP2 631072 sc-eQTL 7.73e-01 0.0141 0.0487 0.615 cMono_IL1B L2
ENSG00000112406 HECA -100477 sc-eQTL 6.60e-01 0.0247 0.056 0.615 cMono_IL1B L2
ENSG00000135540 NHSL1 342032 sc-eQTL 5.57e-01 0.048 0.0816 0.615 cMono_IL1B L2
ENSG00000135597 REPS1 46342 sc-eQTL 2.88e-01 0.0774 0.0727 0.615 cMono_IL1B L2
ENSG00000146386 ABRACL 5858 sc-eQTL 7.37e-07 -0.295 0.0579 0.615 cMono_IL1B L2
ENSG00000164442 CITED2 -340045 sc-eQTL 4.11e-02 -0.13 0.0635 0.615 cMono_IL1B L2
ENSG00000225177 AL590617.2 342055 sc-eQTL 9.14e-01 0.00928 0.0855 0.615 cMono_IL1B L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.40e-01 0.118 0.0794 0.615 cMono_S100A L2
ENSG00000051620 HEBP2 631072 sc-eQTL 5.67e-01 -0.0313 0.0546 0.615 cMono_S100A L2
ENSG00000112406 HECA -100477 sc-eQTL 2.51e-01 -0.0774 0.0673 0.615 cMono_S100A L2
ENSG00000135540 NHSL1 342032 sc-eQTL 4.92e-01 0.0588 0.0854 0.615 cMono_S100A L2
ENSG00000135597 REPS1 46342 sc-eQTL 1.51e-01 0.116 0.0805 0.615 cMono_S100A L2
ENSG00000146386 ABRACL 5858 sc-eQTL 7.76e-10 -0.414 0.0643 0.615 cMono_S100A L2
ENSG00000164442 CITED2 -340045 sc-eQTL 9.82e-02 -0.115 0.0692 0.615 cMono_S100A L2
ENSG00000225177 AL590617.2 342055 sc-eQTL 1.18e-01 0.146 0.0932 0.615 cMono_S100A L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 2.61e-01 0.121 0.108 0.594 gdT L2
ENSG00000051620 HEBP2 631072 sc-eQTL 2.10e-02 -0.236 0.101 0.594 gdT L2
ENSG00000112378 PERP 927184 sc-eQTL 8.07e-02 0.167 0.0948 0.594 gdT L2
ENSG00000112406 HECA -100477 sc-eQTL 1.64e-01 -0.143 0.102 0.594 gdT L2
ENSG00000135597 REPS1 46342 sc-eQTL 9.54e-01 -0.00608 0.106 0.594 gdT L2
ENSG00000146386 ABRACL 5858 sc-eQTL 1.35e-01 -0.119 0.0794 0.594 gdT L2
ENSG00000164442 CITED2 -340045 sc-eQTL 6.74e-01 -0.0388 0.0922 0.594 gdT L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.36e-01 0.139 0.0927 0.613 intMono L2
ENSG00000051620 HEBP2 631072 sc-eQTL 6.28e-01 -0.0304 0.0625 0.613 intMono L2
ENSG00000112406 HECA -100477 sc-eQTL 3.63e-01 0.0696 0.0763 0.613 intMono L2
ENSG00000135540 NHSL1 342032 sc-eQTL 3.02e-01 0.087 0.0841 0.613 intMono L2
ENSG00000135597 REPS1 46342 sc-eQTL 1.13e-02 0.219 0.0858 0.613 intMono L2
ENSG00000146386 ABRACL 5858 sc-eQTL 3.07e-05 -0.325 0.0761 0.613 intMono L2
ENSG00000164442 CITED2 -340045 sc-eQTL 1.85e-02 -0.181 0.0761 0.613 intMono L2
ENSG00000225177 AL590617.2 342055 sc-eQTL 8.81e-01 0.0141 0.0946 0.613 intMono L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 9.87e-01 0.00142 0.086 0.615 ncMono L2
ENSG00000051620 HEBP2 631072 sc-eQTL 5.62e-01 -0.0297 0.0512 0.615 ncMono L2
ENSG00000112406 HECA -100477 sc-eQTL 9.77e-01 -0.00231 0.0786 0.615 ncMono L2
ENSG00000135540 NHSL1 342032 sc-eQTL 2.84e-01 0.0884 0.0823 0.615 ncMono L2
ENSG00000135597 REPS1 46342 sc-eQTL 1.45e-01 0.0905 0.0619 0.615 ncMono L2
ENSG00000146386 ABRACL 5858 sc-eQTL 9.72e-10 -0.438 0.0682 0.615 ncMono L2
ENSG00000164442 CITED2 -340045 sc-eQTL 3.02e-02 -0.137 0.0629 0.615 ncMono L2
ENSG00000225177 AL590617.2 342055 sc-eQTL 8.49e-01 0.0175 0.0917 0.615 ncMono L2
ENSG00000024862 CCDC28A 261094 sc-eQTL 9.78e-01 0.00275 0.1 0.613 pDC L2
ENSG00000051620 HEBP2 631072 sc-eQTL 6.11e-01 -0.0398 0.0781 0.613 pDC L2
ENSG00000112406 HECA -100477 sc-eQTL 9.19e-01 -0.00865 0.0851 0.613 pDC L2
ENSG00000135540 NHSL1 342032 sc-eQTL 5.92e-01 -0.0417 0.0777 0.613 pDC L2
ENSG00000135597 REPS1 46342 sc-eQTL 2.07e-03 0.239 0.0764 0.613 pDC L2
ENSG00000146386 ABRACL 5858 sc-eQTL 2.70e-03 -0.255 0.0836 0.613 pDC L2
ENSG00000164442 CITED2 -340045 sc-eQTL 8.75e-01 -0.016 0.101 0.613 pDC L2
ENSG00000225177 AL590617.2 342055 sc-eQTL 6.91e-01 -0.0311 0.0781 0.613 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.43e-02 0.206 0.0832 0.615 B_Memory LOneK1K
ENSG00000051620 HEBP2 631072 sc-eQTL 6.58e-01 -0.0259 0.0584 0.615 B_Memory LOneK1K
ENSG00000112378 PERP 927184 sc-eQTL 7.17e-01 -0.028 0.077 0.615 B_Memory LOneK1K
ENSG00000112406 HECA -100477 sc-eQTL 5.86e-01 -0.041 0.0751 0.615 B_Memory LOneK1K
ENSG00000135597 REPS1 46342 sc-eQTL 4.60e-01 -0.0576 0.0778 0.615 B_Memory LOneK1K
ENSG00000146386 ABRACL 5858 sc-eQTL 9.44e-02 -0.0901 0.0536 0.615 B_Memory LOneK1K
ENSG00000164440 TXLNB -257395 sc-eQTL 5.45e-01 -0.0541 0.0893 0.615 B_Memory LOneK1K
ENSG00000164442 CITED2 -340045 sc-eQTL 1.42e-01 -0.111 0.0754 0.615 B_Memory LOneK1K
ENSG00000226571 AL592429.2 -236759 sc-eQTL 5.65e-01 -0.0507 0.0881 0.615 B_Memory LOneK1K
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.14e-02 0.199 0.0779 0.615 B_Naive LOneK1K
ENSG00000051620 HEBP2 631072 sc-eQTL 6.49e-01 -0.025 0.0548 0.615 B_Naive LOneK1K
ENSG00000112378 PERP 927184 sc-eQTL 8.28e-01 0.0175 0.0805 0.615 B_Naive LOneK1K
ENSG00000112406 HECA -100477 sc-eQTL 3.64e-03 -0.213 0.0724 0.615 B_Naive LOneK1K
ENSG00000135597 REPS1 46342 sc-eQTL 2.46e-01 0.0731 0.0628 0.615 B_Naive LOneK1K
ENSG00000146386 ABRACL 5858 sc-eQTL 1.00e-02 0.113 0.0435 0.615 B_Naive LOneK1K
ENSG00000164440 TXLNB -257395 sc-eQTL 7.76e-01 0.0263 0.0925 0.615 B_Naive LOneK1K
ENSG00000164442 CITED2 -340045 sc-eQTL 1.38e-01 0.0997 0.0669 0.615 B_Naive LOneK1K
ENSG00000226571 AL592429.2 -236759 sc-eQTL 8.70e-01 0.013 0.079 0.615 B_Naive LOneK1K
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.05e-01 0.103 0.0632 0.615 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 631072 sc-eQTL 8.96e-01 0.0062 0.0474 0.615 CD14_Mono LOneK1K
ENSG00000112406 HECA -100477 sc-eQTL 6.31e-01 -0.0274 0.057 0.615 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 342032 sc-eQTL 2.95e-01 0.0873 0.0832 0.615 CD14_Mono LOneK1K
ENSG00000135597 REPS1 46342 sc-eQTL 3.29e-02 0.146 0.0679 0.615 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 5858 sc-eQTL 6.16e-10 -0.361 0.0557 0.615 CD14_Mono LOneK1K
ENSG00000164442 CITED2 -340045 sc-eQTL 4.93e-02 -0.131 0.0662 0.615 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 342055 sc-eQTL 4.85e-01 0.0625 0.0894 0.615 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 261094 sc-eQTL 1.22e-01 0.133 0.0859 0.612 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 631072 sc-eQTL 8.32e-01 -0.00979 0.0461 0.612 CD16_Mono LOneK1K
ENSG00000112406 HECA -100477 sc-eQTL 8.47e-01 0.0143 0.0738 0.612 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 342032 sc-eQTL 1.69e-01 0.113 0.0817 0.612 CD16_Mono LOneK1K
ENSG00000135597 REPS1 46342 sc-eQTL 1.36e-02 0.125 0.0503 0.612 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 5858 sc-eQTL 1.01e-11 -0.482 0.0669 0.612 CD16_Mono LOneK1K
ENSG00000164442 CITED2 -340045 sc-eQTL 3.27e-03 -0.188 0.0631 0.612 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 342055 sc-eQTL 7.68e-01 -0.0267 0.0907 0.612 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 261094 sc-eQTL 3.71e-01 0.0712 0.0794 0.616 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 631072 sc-eQTL 2.76e-01 -0.0752 0.0688 0.616 NK_CD56dim LOneK1K
ENSG00000112378 PERP 927184 sc-eQTL 4.20e-01 0.0469 0.0581 0.616 NK_CD56dim LOneK1K
ENSG00000112406 HECA -100477 sc-eQTL 9.63e-01 -0.00318 0.0679 0.616 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 46342 sc-eQTL 3.87e-01 0.0574 0.0662 0.616 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 5858 sc-eQTL 7.43e-15 -0.31 0.037 0.616 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 -340045 sc-eQTL 6.72e-01 -0.0262 0.0618 0.616 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000024862 CCDC28A 261094 eQTL 6.99e-07 0.0809 0.0162 0.0 0.0 0.375
ENSG00000146386 ABRACL 5858 eQTL 1.0900000000000001e-73 -0.399 0.0201 0.0 0.0 0.375

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000024862 CCDC28A 261094 1.35e-06 2.62e-06 1.59e-07 2.03e-06 2.28e-07 6.22e-07 1.53e-06 2.25e-07 1.42e-06 6.56e-07 1.9e-06 1.37e-06 2.58e-06 1.41e-06 3.86e-07 9.92e-07 8.9e-07 1.35e-06 6.96e-07 4.48e-07 3.8e-07 1.72e-06 8.59e-07 6.23e-07 2.57e-06 6.68e-07 7.66e-07 5.63e-07 1.59e-06 1.24e-06 7.32e-07 3.8e-08 4.49e-08 9.6e-07 6.04e-07 1.55e-07 4.73e-07 1.5e-07 3.93e-07 3.1e-07 4.45e-08 1.73e-06 8.26e-08 2.61e-08 1.85e-07 3.16e-07 1.21e-07 2.28e-08 9.51e-08
ENSG00000051620 \N 631072 2.95e-07 4.93e-07 3.69e-08 4.04e-07 9.8e-08 1.57e-07 2.95e-07 5.4e-08 1.86e-07 1.28e-07 4.88e-07 2.28e-07 3.18e-07 1.6e-07 5.82e-08 8.71e-08 4.18e-08 2.9e-07 7.16e-08 4.07e-08 1.21e-07 1.7e-07 1.62e-07 4.27e-08 5.53e-07 1.71e-07 1.13e-07 9.74e-08 1.34e-07 2.1e-07 1.52e-07 3.76e-08 3.09e-08 1.03e-07 7.44e-08 3.95e-08 4.84e-08 9.61e-08 6.55e-08 4.55e-08 2.99e-08 1.55e-07 4.33e-08 1.54e-08 5.7e-08 8.94e-09 1.27e-07 4.26e-09 4.79e-08
ENSG00000146386 ABRACL 5858 0.000151 0.000124 1.3e-05 2.8e-05 1.18e-05 3.8e-05 0.00011 8.53e-06 8.68e-05 3.49e-05 0.000125 4.27e-05 0.000163 3.99e-05 1.44e-05 5.76e-05 4.64e-05 6.58e-05 1.85e-05 1.57e-05 3.7e-05 0.000106 9.11e-05 1.97e-05 0.000126 2.26e-05 3.69e-05 3.19e-05 0.000101 4.68e-05 5.17e-05 2.53e-06 4.16e-06 1.28e-05 1.96e-05 1.01e-05 4.32e-06 4.69e-06 9.02e-06 4e-06 1.96e-06 0.000149 1.2e-05 4.21e-07 6.58e-06 1.03e-05 9.18e-06 3e-06 2.61e-06