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Genes within 1Mb (chr6:139029062:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 255553 sc-eQTL 2.52e-01 0.0834 0.0727 0.479 B L1
ENSG00000051620 HEBP2 625531 sc-eQTL 7.85e-02 -0.0977 0.0552 0.479 B L1
ENSG00000112378 PERP 921643 sc-eQTL 1.45e-01 -0.0808 0.0553 0.479 B L1
ENSG00000112406 HECA -106018 sc-eQTL 5.55e-01 -0.0419 0.0709 0.479 B L1
ENSG00000135597 REPS1 40801 sc-eQTL 2.43e-01 0.0731 0.0625 0.479 B L1
ENSG00000146386 ABRACL 317 sc-eQTL 9.46e-06 0.16 0.0351 0.479 B L1
ENSG00000164440 TXLNB -262936 sc-eQTL 1.09e-02 0.228 0.0888 0.479 B L1
ENSG00000164442 CITED2 -345586 sc-eQTL 9.10e-01 0.00643 0.0568 0.479 B L1
ENSG00000226571 AL592429.2 -242300 sc-eQTL 6.09e-01 0.0324 0.0631 0.479 B L1
ENSG00000024862 CCDC28A 255553 sc-eQTL 6.97e-02 0.146 0.0799 0.479 CD4T L1
ENSG00000051620 HEBP2 625531 sc-eQTL 9.52e-01 -0.00329 0.0541 0.479 CD4T L1
ENSG00000112378 PERP 921643 sc-eQTL 2.57e-01 0.0578 0.0508 0.479 CD4T L1
ENSG00000112406 HECA -106018 sc-eQTL 2.09e-01 -0.0843 0.0669 0.479 CD4T L1
ENSG00000135597 REPS1 40801 sc-eQTL 5.61e-01 0.0307 0.0528 0.479 CD4T L1
ENSG00000146386 ABRACL 317 sc-eQTL 8.77e-09 -0.215 0.0358 0.479 CD4T L1
ENSG00000164442 CITED2 -345586 sc-eQTL 2.15e-01 -0.082 0.0659 0.479 CD4T L1
ENSG00000231329 AL031772.1 -210591 sc-eQTL 6.51e-01 -0.0295 0.0652 0.479 CD4T L1
ENSG00000024862 CCDC28A 255553 sc-eQTL 6.90e-02 0.16 0.0877 0.479 CD8T L1
ENSG00000051620 HEBP2 625531 sc-eQTL 3.07e-01 -0.0591 0.0577 0.479 CD8T L1
ENSG00000112378 PERP 921643 sc-eQTL 4.65e-01 0.0431 0.0589 0.479 CD8T L1
ENSG00000112406 HECA -106018 sc-eQTL 4.57e-01 -0.047 0.0632 0.479 CD8T L1
ENSG00000135597 REPS1 40801 sc-eQTL 7.40e-01 0.0198 0.0595 0.479 CD8T L1
ENSG00000146386 ABRACL 317 sc-eQTL 9.48e-08 -0.175 0.0317 0.479 CD8T L1
ENSG00000164442 CITED2 -345586 sc-eQTL 1.35e-01 -0.096 0.064 0.479 CD8T L1
ENSG00000231329 AL031772.1 -210591 sc-eQTL 7.92e-01 0.0206 0.0781 0.479 CD8T L1
ENSG00000024862 CCDC28A 255553 sc-eQTL 2.24e-02 0.206 0.0895 0.489 DC L1
ENSG00000051620 HEBP2 625531 sc-eQTL 2.47e-01 0.0737 0.0635 0.489 DC L1
ENSG00000112406 HECA -106018 sc-eQTL 8.43e-01 0.0149 0.0747 0.489 DC L1
ENSG00000135540 NHSL1 336491 sc-eQTL 3.84e-01 -0.0724 0.083 0.489 DC L1
ENSG00000135597 REPS1 40801 sc-eQTL 2.38e-03 0.221 0.0718 0.489 DC L1
ENSG00000146386 ABRACL 317 sc-eQTL 3.46e-08 -0.383 0.0667 0.489 DC L1
ENSG00000164442 CITED2 -345586 sc-eQTL 7.71e-01 0.0249 0.0854 0.489 DC L1
ENSG00000225177 AL590617.2 336514 sc-eQTL 2.50e-01 0.0998 0.0866 0.489 DC L1
ENSG00000024862 CCDC28A 255553 sc-eQTL 3.53e-02 0.141 0.0666 0.479 Mono L1
ENSG00000051620 HEBP2 625531 sc-eQTL 7.91e-01 0.0123 0.0466 0.479 Mono L1
ENSG00000112406 HECA -106018 sc-eQTL 1.00e+00 7.28e-06 0.0614 0.479 Mono L1
ENSG00000135540 NHSL1 336491 sc-eQTL 1.28e-01 0.134 0.0875 0.479 Mono L1
ENSG00000135597 REPS1 40801 sc-eQTL 1.44e-02 0.125 0.0508 0.479 Mono L1
ENSG00000146386 ABRACL 317 sc-eQTL 2.30e-31 -0.671 0.0486 0.479 Mono L1
ENSG00000164442 CITED2 -345586 sc-eQTL 2.45e-01 -0.0824 0.0707 0.479 Mono L1
ENSG00000225177 AL590617.2 336514 sc-eQTL 9.82e-02 0.151 0.0909 0.479 Mono L1
ENSG00000024862 CCDC28A 255553 sc-eQTL 8.99e-01 -0.00984 0.0775 0.479 NK L1
ENSG00000051620 HEBP2 625531 sc-eQTL 4.08e-01 -0.0565 0.0682 0.479 NK L1
ENSG00000112378 PERP 921643 sc-eQTL 5.42e-01 0.0354 0.0579 0.479 NK L1
ENSG00000112406 HECA -106018 sc-eQTL 3.93e-01 -0.0573 0.0669 0.479 NK L1
ENSG00000135597 REPS1 40801 sc-eQTL 2.37e-01 0.0755 0.0636 0.479 NK L1
ENSG00000146386 ABRACL 317 sc-eQTL 3.24e-13 -0.319 0.041 0.479 NK L1
ENSG00000164442 CITED2 -345586 sc-eQTL 4.70e-01 -0.0447 0.0618 0.479 NK L1
ENSG00000024862 CCDC28A 255553 sc-eQTL 7.36e-01 0.0317 0.0942 0.479 Other_T L1
ENSG00000051620 HEBP2 625531 sc-eQTL 8.41e-01 0.0122 0.0608 0.479 Other_T L1
ENSG00000112378 PERP 921643 sc-eQTL 4.29e-01 0.0594 0.0749 0.479 Other_T L1
ENSG00000112406 HECA -106018 sc-eQTL 3.01e-02 -0.147 0.0674 0.479 Other_T L1
ENSG00000135597 REPS1 40801 sc-eQTL 1.42e-01 0.108 0.0729 0.479 Other_T L1
ENSG00000146386 ABRACL 317 sc-eQTL 2.10e-06 -0.222 0.0455 0.479 Other_T L1
ENSG00000164442 CITED2 -345586 sc-eQTL 6.16e-01 -0.0282 0.0562 0.479 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 255553 sc-eQTL 5.92e-01 -0.0565 0.105 0.48 B_Activated L2
ENSG00000051620 HEBP2 625531 sc-eQTL 2.76e-01 -0.1 0.0919 0.48 B_Activated L2
ENSG00000112378 PERP 921643 sc-eQTL 3.15e-01 0.0481 0.0477 0.48 B_Activated L2
ENSG00000112406 HECA -106018 sc-eQTL 3.90e-01 0.0863 0.1 0.48 B_Activated L2
ENSG00000135597 REPS1 40801 sc-eQTL 5.47e-01 0.0633 0.105 0.48 B_Activated L2
ENSG00000146386 ABRACL 317 sc-eQTL 4.75e-01 -0.0679 0.0948 0.48 B_Activated L2
ENSG00000164440 TXLNB -262936 sc-eQTL 3.58e-02 0.17 0.0803 0.48 B_Activated L2
ENSG00000164442 CITED2 -345586 sc-eQTL 7.97e-01 0.0264 0.102 0.48 B_Activated L2
ENSG00000226571 AL592429.2 -242300 sc-eQTL 3.75e-01 0.0908 0.102 0.48 B_Activated L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 6.59e-01 0.04 0.0907 0.479 B_Intermediate L2
ENSG00000051620 HEBP2 625531 sc-eQTL 8.86e-01 -0.00899 0.0628 0.479 B_Intermediate L2
ENSG00000112378 PERP 921643 sc-eQTL 5.15e-01 -0.0521 0.0799 0.479 B_Intermediate L2
ENSG00000112406 HECA -106018 sc-eQTL 9.01e-01 -0.00983 0.0786 0.479 B_Intermediate L2
ENSG00000135597 REPS1 40801 sc-eQTL 7.54e-01 0.0266 0.0848 0.479 B_Intermediate L2
ENSG00000146386 ABRACL 317 sc-eQTL 2.31e-01 -0.0865 0.0719 0.479 B_Intermediate L2
ENSG00000164440 TXLNB -262936 sc-eQTL 3.36e-02 0.187 0.0875 0.479 B_Intermediate L2
ENSG00000164442 CITED2 -345586 sc-eQTL 7.82e-01 -0.0225 0.0813 0.479 B_Intermediate L2
ENSG00000226571 AL592429.2 -242300 sc-eQTL 9.04e-01 0.0107 0.0881 0.479 B_Intermediate L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 4.68e-01 0.0665 0.0914 0.478 B_Memory L2
ENSG00000051620 HEBP2 625531 sc-eQTL 5.61e-01 -0.0401 0.0688 0.478 B_Memory L2
ENSG00000112378 PERP 921643 sc-eQTL 3.48e-01 -0.0806 0.0857 0.478 B_Memory L2
ENSG00000112406 HECA -106018 sc-eQTL 2.72e-01 -0.0869 0.0789 0.478 B_Memory L2
ENSG00000135597 REPS1 40801 sc-eQTL 7.98e-01 0.0219 0.0858 0.478 B_Memory L2
ENSG00000146386 ABRACL 317 sc-eQTL 7.81e-01 -0.0189 0.0678 0.478 B_Memory L2
ENSG00000164440 TXLNB -262936 sc-eQTL 3.46e-03 0.251 0.0848 0.478 B_Memory L2
ENSG00000164442 CITED2 -345586 sc-eQTL 8.18e-01 -0.0183 0.0795 0.478 B_Memory L2
ENSG00000226571 AL592429.2 -242300 sc-eQTL 7.26e-01 -0.0343 0.0976 0.478 B_Memory L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 6.70e-01 -0.037 0.0868 0.479 B_Naive1 L2
ENSG00000051620 HEBP2 625531 sc-eQTL 3.09e-01 -0.0621 0.0609 0.479 B_Naive1 L2
ENSG00000112378 PERP 921643 sc-eQTL 3.52e-01 -0.0771 0.0826 0.479 B_Naive1 L2
ENSG00000112406 HECA -106018 sc-eQTL 1.55e-01 -0.107 0.0753 0.479 B_Naive1 L2
ENSG00000135597 REPS1 40801 sc-eQTL 2.39e-01 0.0824 0.0698 0.479 B_Naive1 L2
ENSG00000146386 ABRACL 317 sc-eQTL 5.56e-08 0.257 0.0457 0.479 B_Naive1 L2
ENSG00000164440 TXLNB -262936 sc-eQTL 1.71e-01 0.126 0.0913 0.479 B_Naive1 L2
ENSG00000164442 CITED2 -345586 sc-eQTL 6.39e-01 0.0313 0.0667 0.479 B_Naive1 L2
ENSG00000226571 AL592429.2 -242300 sc-eQTL 8.32e-01 0.0186 0.0876 0.479 B_Naive1 L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 2.93e-02 0.184 0.084 0.479 B_Naive2 L2
ENSG00000051620 HEBP2 625531 sc-eQTL 3.74e-01 -0.0516 0.058 0.479 B_Naive2 L2
ENSG00000112378 PERP 921643 sc-eQTL 6.90e-01 -0.0278 0.0698 0.479 B_Naive2 L2
ENSG00000112406 HECA -106018 sc-eQTL 6.53e-01 0.0359 0.0799 0.479 B_Naive2 L2
ENSG00000135597 REPS1 40801 sc-eQTL 1.19e-01 -0.119 0.0758 0.479 B_Naive2 L2
ENSG00000146386 ABRACL 317 sc-eQTL 1.42e-08 0.307 0.052 0.479 B_Naive2 L2
ENSG00000164440 TXLNB -262936 sc-eQTL 2.90e-01 -0.0941 0.0887 0.479 B_Naive2 L2
ENSG00000164442 CITED2 -345586 sc-eQTL 4.15e-01 -0.074 0.0906 0.479 B_Naive2 L2
ENSG00000226571 AL592429.2 -242300 sc-eQTL 6.22e-01 0.0411 0.0832 0.479 B_Naive2 L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 8.71e-01 0.0144 0.0886 0.491 CD4_CTL L2
ENSG00000051620 HEBP2 625531 sc-eQTL 2.58e-01 -0.0865 0.0763 0.491 CD4_CTL L2
ENSG00000112378 PERP 921643 sc-eQTL 1.50e-01 -0.134 0.0927 0.491 CD4_CTL L2
ENSG00000112406 HECA -106018 sc-eQTL 9.69e-01 0.00348 0.0894 0.491 CD4_CTL L2
ENSG00000135597 REPS1 40801 sc-eQTL 2.55e-01 0.0987 0.0865 0.491 CD4_CTL L2
ENSG00000146386 ABRACL 317 sc-eQTL 1.61e-03 -0.247 0.0771 0.491 CD4_CTL L2
ENSG00000164442 CITED2 -345586 sc-eQTL 6.56e-01 0.0354 0.0794 0.491 CD4_CTL L2
ENSG00000231329 AL031772.1 -210591 sc-eQTL 6.72e-02 0.15 0.0813 0.491 CD4_CTL L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 2.18e-01 0.104 0.0843 0.479 CD4_Naive L2
ENSG00000051620 HEBP2 625531 sc-eQTL 9.81e-01 0.00123 0.0528 0.479 CD4_Naive L2
ENSG00000112378 PERP 921643 sc-eQTL 4.27e-01 0.0554 0.0696 0.479 CD4_Naive L2
ENSG00000112406 HECA -106018 sc-eQTL 3.32e-01 -0.0638 0.0656 0.479 CD4_Naive L2
ENSG00000135597 REPS1 40801 sc-eQTL 9.51e-01 -0.0036 0.0583 0.479 CD4_Naive L2
ENSG00000146386 ABRACL 317 sc-eQTL 1.46e-01 -0.057 0.0391 0.479 CD4_Naive L2
ENSG00000164442 CITED2 -345586 sc-eQTL 3.68e-01 -0.0601 0.0666 0.479 CD4_Naive L2
ENSG00000231329 AL031772.1 -210591 sc-eQTL 9.98e-01 -0.000201 0.0675 0.479 CD4_Naive L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 1.34e-01 0.124 0.0825 0.479 CD4_TCM L2
ENSG00000051620 HEBP2 625531 sc-eQTL 7.63e-01 -0.0186 0.0617 0.479 CD4_TCM L2
ENSG00000112378 PERP 921643 sc-eQTL 4.03e-02 0.158 0.0767 0.479 CD4_TCM L2
ENSG00000112406 HECA -106018 sc-eQTL 2.17e-01 -0.0818 0.0661 0.479 CD4_TCM L2
ENSG00000135597 REPS1 40801 sc-eQTL 4.52e-01 0.0474 0.0628 0.479 CD4_TCM L2
ENSG00000146386 ABRACL 317 sc-eQTL 1.32e-19 -0.399 0.0398 0.479 CD4_TCM L2
ENSG00000164442 CITED2 -345586 sc-eQTL 7.58e-02 -0.127 0.0714 0.479 CD4_TCM L2
ENSG00000231329 AL031772.1 -210591 sc-eQTL 7.75e-01 -0.0223 0.0777 0.479 CD4_TCM L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 6.36e-01 0.0449 0.0946 0.479 CD4_TEM L2
ENSG00000051620 HEBP2 625531 sc-eQTL 9.04e-01 -0.00778 0.0645 0.479 CD4_TEM L2
ENSG00000112378 PERP 921643 sc-eQTL 5.73e-01 0.0424 0.075 0.479 CD4_TEM L2
ENSG00000112406 HECA -106018 sc-eQTL 5.41e-02 -0.141 0.073 0.479 CD4_TEM L2
ENSG00000135597 REPS1 40801 sc-eQTL 1.70e-01 0.11 0.0799 0.479 CD4_TEM L2
ENSG00000146386 ABRACL 317 sc-eQTL 2.39e-07 -0.287 0.0537 0.479 CD4_TEM L2
ENSG00000164442 CITED2 -345586 sc-eQTL 9.48e-01 -0.00492 0.0751 0.479 CD4_TEM L2
ENSG00000231329 AL031772.1 -210591 sc-eQTL 6.90e-01 0.0314 0.0786 0.479 CD4_TEM L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 2.63e-01 0.108 0.0958 0.479 CD8_CTL L2
ENSG00000051620 HEBP2 625531 sc-eQTL 1.60e-01 -0.0963 0.0683 0.479 CD8_CTL L2
ENSG00000112378 PERP 921643 sc-eQTL 3.69e-01 0.077 0.0855 0.479 CD8_CTL L2
ENSG00000112406 HECA -106018 sc-eQTL 2.11e-01 -0.0874 0.0697 0.479 CD8_CTL L2
ENSG00000135597 REPS1 40801 sc-eQTL 3.54e-01 0.0694 0.0747 0.479 CD8_CTL L2
ENSG00000146386 ABRACL 317 sc-eQTL 7.81e-11 -0.375 0.0548 0.479 CD8_CTL L2
ENSG00000164442 CITED2 -345586 sc-eQTL 5.71e-01 -0.04 0.0705 0.479 CD8_CTL L2
ENSG00000231329 AL031772.1 -210591 sc-eQTL 3.84e-01 0.0737 0.0845 0.479 CD8_CTL L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 5.04e-01 0.0613 0.0917 0.479 CD8_Naive L2
ENSG00000051620 HEBP2 625531 sc-eQTL 4.59e-01 -0.0435 0.0586 0.479 CD8_Naive L2
ENSG00000112378 PERP 921643 sc-eQTL 9.73e-01 0.00243 0.0705 0.479 CD8_Naive L2
ENSG00000112406 HECA -106018 sc-eQTL 8.06e-01 -0.0174 0.0709 0.479 CD8_Naive L2
ENSG00000135597 REPS1 40801 sc-eQTL 4.84e-01 0.0497 0.071 0.479 CD8_Naive L2
ENSG00000146386 ABRACL 317 sc-eQTL 2.19e-01 -0.0457 0.0371 0.479 CD8_Naive L2
ENSG00000164442 CITED2 -345586 sc-eQTL 7.21e-01 -0.0269 0.0753 0.479 CD8_Naive L2
ENSG00000231329 AL031772.1 -210591 sc-eQTL 8.94e-01 -0.0115 0.0862 0.479 CD8_Naive L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 9.50e-01 -0.00653 0.103 0.491 CD8_TCM L2
ENSG00000051620 HEBP2 625531 sc-eQTL 6.39e-01 -0.0341 0.0725 0.491 CD8_TCM L2
ENSG00000112378 PERP 921643 sc-eQTL 1.02e-01 0.156 0.0951 0.491 CD8_TCM L2
ENSG00000112406 HECA -106018 sc-eQTL 2.12e-01 -0.0941 0.0752 0.491 CD8_TCM L2
ENSG00000135597 REPS1 40801 sc-eQTL 6.66e-01 -0.0339 0.0784 0.491 CD8_TCM L2
ENSG00000146386 ABRACL 317 sc-eQTL 2.50e-01 -0.0898 0.0779 0.491 CD8_TCM L2
ENSG00000164442 CITED2 -345586 sc-eQTL 4.78e-01 -0.0571 0.0802 0.491 CD8_TCM L2
ENSG00000231329 AL031772.1 -210591 sc-eQTL 7.29e-01 0.0295 0.0848 0.491 CD8_TCM L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 7.16e-01 0.0349 0.0957 0.477 CD8_TEM L2
ENSG00000051620 HEBP2 625531 sc-eQTL 8.09e-01 0.021 0.0871 0.477 CD8_TEM L2
ENSG00000112378 PERP 921643 sc-eQTL 2.09e-01 -0.125 0.0989 0.477 CD8_TEM L2
ENSG00000112406 HECA -106018 sc-eQTL 8.14e-01 -0.0211 0.0896 0.477 CD8_TEM L2
ENSG00000135597 REPS1 40801 sc-eQTL 7.53e-01 -0.0294 0.0933 0.477 CD8_TEM L2
ENSG00000146386 ABRACL 317 sc-eQTL 2.45e-05 -0.297 0.0687 0.477 CD8_TEM L2
ENSG00000164442 CITED2 -345586 sc-eQTL 9.37e-02 -0.131 0.0776 0.477 CD8_TEM L2
ENSG00000231329 AL031772.1 -210591 sc-eQTL 2.89e-02 0.193 0.0878 0.477 CD8_TEM L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 4.29e-01 0.0796 0.1 0.481 MAIT L2
ENSG00000051620 HEBP2 625531 sc-eQTL 8.50e-01 -0.0132 0.0697 0.481 MAIT L2
ENSG00000112378 PERP 921643 sc-eQTL 1.82e-01 0.123 0.0918 0.481 MAIT L2
ENSG00000112406 HECA -106018 sc-eQTL 1.59e-02 -0.183 0.0753 0.481 MAIT L2
ENSG00000135597 REPS1 40801 sc-eQTL 1.05e-01 0.133 0.0817 0.481 MAIT L2
ENSG00000146386 ABRACL 317 sc-eQTL 8.25e-05 -0.234 0.0583 0.481 MAIT L2
ENSG00000164442 CITED2 -345586 sc-eQTL 9.00e-01 -0.00899 0.0712 0.481 MAIT L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 1.90e-01 -0.119 0.0907 0.48 NK_CD56bright L2
ENSG00000051620 HEBP2 625531 sc-eQTL 9.84e-01 -0.00159 0.0775 0.48 NK_CD56bright L2
ENSG00000112378 PERP 921643 sc-eQTL 1.10e-01 0.132 0.0824 0.48 NK_CD56bright L2
ENSG00000112406 HECA -106018 sc-eQTL 1.81e-01 -0.11 0.0822 0.48 NK_CD56bright L2
ENSG00000135597 REPS1 40801 sc-eQTL 6.73e-01 -0.0325 0.0769 0.48 NK_CD56bright L2
ENSG00000146386 ABRACL 317 sc-eQTL 4.86e-01 -0.0495 0.0708 0.48 NK_CD56bright L2
ENSG00000164442 CITED2 -345586 sc-eQTL 8.31e-01 -0.0162 0.0761 0.48 NK_CD56bright L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 7.30e-01 0.0288 0.0835 0.481 NK_CD56dim L2
ENSG00000051620 HEBP2 625531 sc-eQTL 2.13e-01 -0.0923 0.0739 0.481 NK_CD56dim L2
ENSG00000112378 PERP 921643 sc-eQTL 4.81e-01 0.0469 0.0664 0.481 NK_CD56dim L2
ENSG00000112406 HECA -106018 sc-eQTL 4.62e-01 -0.0529 0.0718 0.481 NK_CD56dim L2
ENSG00000135597 REPS1 40801 sc-eQTL 1.79e-01 0.0914 0.0678 0.481 NK_CD56dim L2
ENSG00000146386 ABRACL 317 sc-eQTL 8.18e-11 -0.286 0.0417 0.481 NK_CD56dim L2
ENSG00000164442 CITED2 -345586 sc-eQTL 7.59e-01 -0.0189 0.0615 0.481 NK_CD56dim L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 5.09e-01 0.0643 0.0972 0.482 NK_HLA L2
ENSG00000051620 HEBP2 625531 sc-eQTL 5.25e-01 -0.0527 0.0828 0.482 NK_HLA L2
ENSG00000112378 PERP 921643 sc-eQTL 9.15e-01 -0.00782 0.0736 0.482 NK_HLA L2
ENSG00000112406 HECA -106018 sc-eQTL 9.97e-01 0.000322 0.0909 0.482 NK_HLA L2
ENSG00000135597 REPS1 40801 sc-eQTL 6.74e-01 -0.0378 0.0897 0.482 NK_HLA L2
ENSG00000146386 ABRACL 317 sc-eQTL 2.78e-04 -0.264 0.0714 0.482 NK_HLA L2
ENSG00000164442 CITED2 -345586 sc-eQTL 4.20e-01 0.0636 0.0787 0.482 NK_HLA L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 4.32e-01 0.0685 0.0871 0.481 NK_cytokine L2
ENSG00000051620 HEBP2 625531 sc-eQTL 9.10e-01 -0.00849 0.0751 0.481 NK_cytokine L2
ENSG00000112378 PERP 921643 sc-eQTL 4.55e-01 -0.0524 0.0699 0.481 NK_cytokine L2
ENSG00000112406 HECA -106018 sc-eQTL 3.25e-01 -0.074 0.0749 0.481 NK_cytokine L2
ENSG00000135597 REPS1 40801 sc-eQTL 1.56e-01 0.11 0.0772 0.481 NK_cytokine L2
ENSG00000146386 ABRACL 317 sc-eQTL 1.90e-09 -0.288 0.0458 0.481 NK_cytokine L2
ENSG00000164442 CITED2 -345586 sc-eQTL 4.64e-01 -0.0478 0.0651 0.481 NK_cytokine L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 6.70e-01 -0.0457 0.107 0.456 PB L2
ENSG00000051620 HEBP2 625531 sc-eQTL 2.52e-01 -0.109 0.0947 0.456 PB L2
ENSG00000112378 PERP 921643 sc-eQTL 8.78e-01 0.0112 0.0726 0.456 PB L2
ENSG00000112406 HECA -106018 sc-eQTL 5.94e-01 -0.0622 0.117 0.456 PB L2
ENSG00000135597 REPS1 40801 sc-eQTL 1.57e-01 0.147 0.103 0.456 PB L2
ENSG00000146386 ABRACL 317 sc-eQTL 5.92e-03 -0.197 0.0701 0.456 PB L2
ENSG00000164440 TXLNB -262936 sc-eQTL 9.22e-01 0.0104 0.106 0.456 PB L2
ENSG00000164442 CITED2 -345586 sc-eQTL 7.42e-01 0.0264 0.0798 0.456 PB L2
ENSG00000226571 AL592429.2 -242300 sc-eQTL 1.17e-01 0.167 0.106 0.456 PB L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 3.20e-01 0.0955 0.0958 0.478 Pro_T L2
ENSG00000051620 HEBP2 625531 sc-eQTL 9.71e-01 -0.0028 0.0765 0.478 Pro_T L2
ENSG00000112378 PERP 921643 sc-eQTL 7.86e-01 0.0192 0.0707 0.478 Pro_T L2
ENSG00000112406 HECA -106018 sc-eQTL 1.75e-01 -0.102 0.0752 0.478 Pro_T L2
ENSG00000135597 REPS1 40801 sc-eQTL 9.08e-01 0.0103 0.089 0.478 Pro_T L2
ENSG00000146386 ABRACL 317 sc-eQTL 4.02e-02 -0.117 0.0568 0.478 Pro_T L2
ENSG00000164442 CITED2 -345586 sc-eQTL 8.19e-01 -0.0157 0.0684 0.478 Pro_T L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 1.01e-01 0.148 0.0897 0.479 Treg L2
ENSG00000051620 HEBP2 625531 sc-eQTL 6.66e-01 0.0266 0.0617 0.479 Treg L2
ENSG00000112378 PERP 921643 sc-eQTL 6.89e-01 0.039 0.0971 0.479 Treg L2
ENSG00000112406 HECA -106018 sc-eQTL 5.67e-01 -0.043 0.075 0.479 Treg L2
ENSG00000135597 REPS1 40801 sc-eQTL 7.98e-01 0.0199 0.0776 0.479 Treg L2
ENSG00000146386 ABRACL 317 sc-eQTL 1.56e-11 -0.423 0.0594 0.479 Treg L2
ENSG00000164442 CITED2 -345586 sc-eQTL 2.31e-01 -0.0883 0.0736 0.479 Treg L2
ENSG00000231329 AL031772.1 -210591 sc-eQTL 3.46e-01 -0.0796 0.0843 0.479 Treg L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 7.22e-03 0.24 0.0884 0.49 cDC L2
ENSG00000051620 HEBP2 625531 sc-eQTL 2.01e-01 0.0826 0.0644 0.49 cDC L2
ENSG00000112406 HECA -106018 sc-eQTL 4.91e-01 0.0591 0.0857 0.49 cDC L2
ENSG00000135540 NHSL1 336491 sc-eQTL 5.78e-01 -0.0467 0.0839 0.49 cDC L2
ENSG00000135597 REPS1 40801 sc-eQTL 7.95e-02 0.169 0.0959 0.49 cDC L2
ENSG00000146386 ABRACL 317 sc-eQTL 2.62e-05 -0.325 0.0754 0.49 cDC L2
ENSG00000164442 CITED2 -345586 sc-eQTL 4.25e-01 -0.067 0.0837 0.49 cDC L2
ENSG00000225177 AL590617.2 336514 sc-eQTL 3.18e-01 0.0926 0.0924 0.49 cDC L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 6.51e-02 0.133 0.0715 0.479 cMono_IL1B L2
ENSG00000051620 HEBP2 625531 sc-eQTL 6.72e-01 0.0219 0.0517 0.479 cMono_IL1B L2
ENSG00000112406 HECA -106018 sc-eQTL 4.18e-01 0.0483 0.0594 0.479 cMono_IL1B L2
ENSG00000135540 NHSL1 336491 sc-eQTL 4.51e-01 -0.0653 0.0866 0.479 cMono_IL1B L2
ENSG00000135597 REPS1 40801 sc-eQTL 3.40e-01 0.0738 0.0772 0.479 cMono_IL1B L2
ENSG00000146386 ABRACL 317 sc-eQTL 1.15e-23 -0.583 0.0513 0.479 cMono_IL1B L2
ENSG00000164442 CITED2 -345586 sc-eQTL 2.81e-01 -0.0733 0.0679 0.479 cMono_IL1B L2
ENSG00000225177 AL590617.2 336514 sc-eQTL 9.27e-02 0.152 0.0902 0.479 cMono_IL1B L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 3.19e-01 0.0839 0.084 0.479 cMono_S100A L2
ENSG00000051620 HEBP2 625531 sc-eQTL 9.63e-01 -0.00264 0.0576 0.479 cMono_S100A L2
ENSG00000112406 HECA -106018 sc-eQTL 6.74e-01 0.0299 0.0711 0.479 cMono_S100A L2
ENSG00000135540 NHSL1 336491 sc-eQTL 2.84e-02 0.197 0.0891 0.479 cMono_S100A L2
ENSG00000135597 REPS1 40801 sc-eQTL 6.87e-02 0.155 0.0846 0.479 cMono_S100A L2
ENSG00000146386 ABRACL 317 sc-eQTL 8.35e-24 -0.666 0.0583 0.479 cMono_S100A L2
ENSG00000164442 CITED2 -345586 sc-eQTL 9.65e-02 -0.122 0.0729 0.479 cMono_S100A L2
ENSG00000225177 AL590617.2 336514 sc-eQTL 3.95e-01 0.084 0.0986 0.479 cMono_S100A L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 8.53e-01 0.0203 0.109 0.479 gdT L2
ENSG00000051620 HEBP2 625531 sc-eQTL 3.80e-01 -0.0911 0.104 0.479 gdT L2
ENSG00000112378 PERP 921643 sc-eQTL 1.84e-01 0.128 0.0959 0.479 gdT L2
ENSG00000112406 HECA -106018 sc-eQTL 1.67e-01 -0.143 0.103 0.479 gdT L2
ENSG00000135597 REPS1 40801 sc-eQTL 2.41e-01 -0.125 0.107 0.479 gdT L2
ENSG00000146386 ABRACL 317 sc-eQTL 5.46e-01 -0.0488 0.0805 0.479 gdT L2
ENSG00000164442 CITED2 -345586 sc-eQTL 8.10e-01 -0.0224 0.0929 0.479 gdT L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 1.58e-01 0.136 0.0961 0.482 intMono L2
ENSG00000051620 HEBP2 625531 sc-eQTL 4.94e-01 -0.0444 0.0648 0.482 intMono L2
ENSG00000112406 HECA -106018 sc-eQTL 8.51e-01 0.0149 0.0793 0.482 intMono L2
ENSG00000135540 NHSL1 336491 sc-eQTL 5.20e-02 0.169 0.0866 0.482 intMono L2
ENSG00000135597 REPS1 40801 sc-eQTL 6.30e-03 0.245 0.0887 0.482 intMono L2
ENSG00000146386 ABRACL 317 sc-eQTL 3.59e-11 -0.518 0.0739 0.482 intMono L2
ENSG00000164442 CITED2 -345586 sc-eQTL 1.40e-02 -0.195 0.0788 0.482 intMono L2
ENSG00000225177 AL590617.2 336514 sc-eQTL 3.03e-02 0.212 0.0969 0.482 intMono L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 5.02e-01 0.0601 0.0893 0.486 ncMono L2
ENSG00000051620 HEBP2 625531 sc-eQTL 9.31e-01 -0.00462 0.0533 0.486 ncMono L2
ENSG00000112406 HECA -106018 sc-eQTL 4.67e-01 -0.0594 0.0816 0.486 ncMono L2
ENSG00000135540 NHSL1 336491 sc-eQTL 2.46e-01 0.0997 0.0856 0.486 ncMono L2
ENSG00000135597 REPS1 40801 sc-eQTL 3.21e-01 0.0643 0.0646 0.486 ncMono L2
ENSG00000146386 ABRACL 317 sc-eQTL 2.71e-11 -0.492 0.0697 0.486 ncMono L2
ENSG00000164442 CITED2 -345586 sc-eQTL 9.63e-02 -0.11 0.0657 0.486 ncMono L2
ENSG00000225177 AL590617.2 336514 sc-eQTL 6.62e-01 0.0417 0.0954 0.486 ncMono L2
ENSG00000024862 CCDC28A 255553 sc-eQTL 9.88e-01 0.00154 0.101 0.494 pDC L2
ENSG00000051620 HEBP2 625531 sc-eQTL 1.59e-01 0.11 0.078 0.494 pDC L2
ENSG00000112406 HECA -106018 sc-eQTL 3.86e-01 -0.0742 0.0853 0.494 pDC L2
ENSG00000135540 NHSL1 336491 sc-eQTL 1.11e-01 -0.124 0.0775 0.494 pDC L2
ENSG00000135597 REPS1 40801 sc-eQTL 6.09e-02 0.148 0.0783 0.494 pDC L2
ENSG00000146386 ABRACL 317 sc-eQTL 3.64e-04 -0.303 0.083 0.494 pDC L2
ENSG00000164442 CITED2 -345586 sc-eQTL 9.93e-01 0.000874 0.102 0.494 pDC L2
ENSG00000225177 AL590617.2 336514 sc-eQTL 5.62e-01 0.0455 0.0784 0.494 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 255553 sc-eQTL 3.44e-01 0.0817 0.0861 0.479 B_Memory LOneK1K
ENSG00000051620 HEBP2 625531 sc-eQTL 1.84e-01 -0.0793 0.0595 0.479 B_Memory LOneK1K
ENSG00000112378 PERP 921643 sc-eQTL 1.84e-01 -0.104 0.0784 0.479 B_Memory LOneK1K
ENSG00000112406 HECA -106018 sc-eQTL 8.79e-01 -0.0117 0.0767 0.479 B_Memory LOneK1K
ENSG00000135597 REPS1 40801 sc-eQTL 6.65e-01 0.0345 0.0795 0.479 B_Memory LOneK1K
ENSG00000146386 ABRACL 317 sc-eQTL 5.32e-01 -0.0345 0.0551 0.479 B_Memory LOneK1K
ENSG00000164440 TXLNB -262936 sc-eQTL 8.54e-06 0.397 0.0871 0.479 B_Memory LOneK1K
ENSG00000164442 CITED2 -345586 sc-eQTL 7.28e-01 -0.027 0.0774 0.479 B_Memory LOneK1K
ENSG00000226571 AL592429.2 -242300 sc-eQTL 8.05e-01 -0.0222 0.0901 0.479 B_Memory LOneK1K
ENSG00000024862 CCDC28A 255553 sc-eQTL 4.42e-01 0.0621 0.0806 0.479 B_Naive LOneK1K
ENSG00000051620 HEBP2 625531 sc-eQTL 7.90e-02 -0.0981 0.0556 0.479 B_Naive LOneK1K
ENSG00000112378 PERP 921643 sc-eQTL 1.59e-01 -0.116 0.0818 0.479 B_Naive LOneK1K
ENSG00000112406 HECA -106018 sc-eQTL 3.47e-01 -0.0709 0.0753 0.479 B_Naive LOneK1K
ENSG00000135597 REPS1 40801 sc-eQTL 8.48e-01 0.0124 0.0643 0.479 B_Naive LOneK1K
ENSG00000146386 ABRACL 317 sc-eQTL 7.80e-13 0.305 0.0399 0.479 B_Naive LOneK1K
ENSG00000164440 TXLNB -262936 sc-eQTL 4.08e-01 0.0781 0.0943 0.479 B_Naive LOneK1K
ENSG00000164442 CITED2 -345586 sc-eQTL 9.86e-01 0.00121 0.0686 0.479 B_Naive LOneK1K
ENSG00000226571 AL592429.2 -242300 sc-eQTL 9.29e-01 0.00722 0.0806 0.479 B_Naive LOneK1K
ENSG00000024862 CCDC28A 255553 sc-eQTL 4.64e-02 0.134 0.067 0.479 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 625531 sc-eQTL 9.51e-01 0.00312 0.0504 0.479 CD14_Mono LOneK1K
ENSG00000112406 HECA -106018 sc-eQTL 5.47e-01 0.0366 0.0606 0.479 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 336491 sc-eQTL 5.35e-01 0.0551 0.0886 0.479 CD14_Mono LOneK1K
ENSG00000135597 REPS1 40801 sc-eQTL 3.24e-02 0.155 0.0721 0.479 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 317 sc-eQTL 4.54e-30 -0.639 0.0477 0.479 CD14_Mono LOneK1K
ENSG00000164442 CITED2 -345586 sc-eQTL 2.76e-01 -0.0773 0.0708 0.479 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 336514 sc-eQTL 1.25e-01 0.146 0.0946 0.479 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 255553 sc-eQTL 2.25e-01 0.11 0.09 0.481 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 625531 sc-eQTL 6.39e-01 0.0226 0.0482 0.481 CD16_Mono LOneK1K
ENSG00000112406 HECA -106018 sc-eQTL 7.98e-01 0.0197 0.0771 0.481 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 336491 sc-eQTL 2.26e-02 0.195 0.0847 0.481 CD16_Mono LOneK1K
ENSG00000135597 REPS1 40801 sc-eQTL 7.28e-02 0.0955 0.053 0.481 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 317 sc-eQTL 2.92e-16 -0.592 0.0666 0.481 CD16_Mono LOneK1K
ENSG00000164442 CITED2 -345586 sc-eQTL 2.34e-02 -0.152 0.0665 0.481 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 336514 sc-eQTL 2.28e-01 0.114 0.0945 0.481 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 255553 sc-eQTL 7.24e-01 0.0285 0.0806 0.481 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 625531 sc-eQTL 5.59e-01 -0.0408 0.0698 0.481 NK_CD56dim LOneK1K
ENSG00000112378 PERP 921643 sc-eQTL 8.80e-01 0.00887 0.0589 0.481 NK_CD56dim LOneK1K
ENSG00000112406 HECA -106018 sc-eQTL 3.54e-01 -0.0637 0.0686 0.481 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 40801 sc-eQTL 9.62e-02 0.111 0.0667 0.481 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 317 sc-eQTL 9.47e-17 -0.333 0.0367 0.481 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 -345586 sc-eQTL 4.87e-01 -0.0436 0.0626 0.481 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000024862 CCDC28A 255553 eQTL 0.00888 0.0411 0.0157 0.0 0.0 0.463
ENSG00000135597 REPS1 40801 pQTL 0.0308 0.0559 0.0259 0.00107 0.0 0.461
ENSG00000135597 REPS1 40801 eQTL 1.71e-06 0.0792 0.0165 0.00478 0.00181 0.463
ENSG00000146386 ABRACL 317 eQTL 1.46e-169 -0.526 0.0153 0.0 0.00472 0.463
ENSG00000226571 AL592429.2 -242300 eQTL 8.86e-03 -0.0863 0.0329 0.00186 0.0 0.463

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000024862 CCDC28A 255553 3.04e-06 3.93e-06 6.54e-07 3.05e-06 1.67e-06 8.28e-07 5.66e-06 6.45e-07 5.13e-06 1.99e-06 4.32e-06 1.42e-06 7.51e-06 2.45e-06 1.03e-06 3.22e-06 2.01e-06 2.94e-06 1.55e-06 1.2e-06 2.8e-06 4.79e-06 3.82e-06 1.82e-06 4.02e-06 1.28e-06 2.49e-06 1.71e-06 3.22e-06 4.38e-06 1.96e-06 5.83e-07 8.14e-07 2.19e-06 2.27e-06 1.32e-06 9.3e-07 4.36e-07 1.38e-06 1.01e-06 3.68e-07 3.78e-06 6.62e-07 2.06e-07 3.58e-07 1.32e-06 8.3e-07 3.19e-07 2.22e-07
ENSG00000135597 REPS1 40801 3.44e-05 2.95e-05 7.19e-06 1.45e-05 4.08e-06 1.36e-05 4.1e-05 3.76e-06 3.01e-05 1.69e-05 3.3e-05 1.33e-05 5.31e-05 1.06e-05 6.69e-06 2.12e-05 1.96e-05 2.46e-05 7.63e-06 6.57e-06 1.59e-05 3.37e-05 3.03e-05 9.82e-06 3.73e-05 7.7e-06 1.56e-05 1.24e-05 3.09e-05 2.41e-05 1.54e-05 1.59e-06 2.56e-06 7.93e-06 1.06e-05 5.11e-06 3.09e-06 3.21e-06 5.2e-06 3.61e-06 1.7e-06 3.18e-05 3.25e-06 4.29e-07 2.19e-06 2.81e-06 4.52e-06 1.11e-06 1.33e-06
ENSG00000146386 ABRACL 317 0.00016 0.000124 2.06e-05 3.47e-05 1.84e-05 4.54e-05 0.000129 1.14e-05 9.38e-05 4.52e-05 0.000124 4.4e-05 0.000148 4.31e-05 1.94e-05 7.72e-05 5.72e-05 8.22e-05 2.66e-05 1.84e-05 4.79e-05 0.000125 0.000115 2.7e-05 0.000126 2.84e-05 4.7e-05 3.73e-05 0.000112 7.05e-05 5.67e-05 3.96e-06 7.25e-06 1.62e-05 2.42e-05 1.43e-05 6.52e-06 7.66e-06 1.02e-05 6.13e-06 2.54e-06 0.000125 1.58e-05 5.98e-07 7.02e-06 1.08e-05 1.16e-05 4.21e-06 3.88e-06
ENSG00000231329 \N -210591 4.33e-06 5e-06 1.24e-06 4.2e-06 2.06e-06 1.7e-06 9.09e-06 9.07e-07 5.33e-06 2.82e-06 7.41e-06 2.63e-06 1.13e-05 2.02e-06 1.23e-06 4.31e-06 3.28e-06 3.84e-06 1.84e-06 1.2e-06 4.63e-06 6.84e-06 4.97e-06 1.68e-06 5.75e-06 1.9e-06 3.1e-06 2.2e-06 4.47e-06 7.18e-06 2.56e-06 9.77e-07 7.21e-07 3.06e-06 2.59e-06 2.22e-06 1.03e-06 1.35e-06 2.2e-06 1.3e-06 2.25e-07 5.71e-06 1.19e-06 1.69e-07 7.68e-07 1.22e-06 1.05e-06 7.21e-07 3.03e-07