Genes within 1Mb (chr12:113291183:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089060 SLC8B1 -68310 eQTL 1.30e-78 0.456 0.0221 0.0 0.0 0.267
ENSG00000111331 OAS3 352739 eQTL 1.97e-04 -0.0538 0.0144 0.00151 0.00186 0.267
ENSG00000111335 OAS2 312788 eQTL 3.59e-05 -0.0533 0.0128 0.0 0.0 0.267
ENSG00000111344 RASAL1 154944 eQTL 2.30e-41 0.556 0.0393 0.0 0.0 0.267
ENSG00000123064 DDX54 105704 eQTL 2.52e-21 -0.112 0.0115 0.0 0.0 0.267
ENSG00000139405 RITA1 105657 eQTL 1.45e-96 -0.405 0.0173 0.0 0.0 0.267
ENSG00000139410 SDSL -131197 eQTL 4.18e-04 -0.086 0.0243 0.0 0.0 0.267
ENSG00000151176 PLBD2 -67383 eQTL 5.00e-08 0.0753 0.0137 0.0 0.0 0.267
ENSG00000179295 PTPN11 872832 eQTL 3.11e-02 0.0343 0.0159 0.0 0.0 0.267
ENSG00000186710 CFAP73 141325 eQTL 9.38e-08 0.191 0.0356 0.00218 0.00194 0.267


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000089060 SLC8B1 -68310 7.82e-06 9.23e-06 1.32e-06 5.05e-06 2.38e-06 4e-06 1.04e-05 2.2e-06 9.1e-06 5.05e-06 1.19e-05 5.17e-06 1.36e-05 3.9e-06 2.73e-06 6.33e-06 4.01e-06 7.55e-06 2.54e-06 2.83e-06 5.1e-06 8.85e-06 7.91e-06 3.3e-06 1.36e-05 4.41e-06 4.82e-06 4.08e-06 1.07e-05 7.94e-06 5.14e-06 1.01e-06 1.17e-06 3.44e-06 3.99e-06 2.65e-06 1.78e-06 1.93e-06 2.17e-06 9.95e-07 1.46e-06 1.14e-05 1.32e-06 2.86e-07 9.34e-07 1.72e-06 1.82e-06 7.04e-07 4.53e-07
ENSG00000111331 OAS3 352739 1.24e-06 9.37e-07 2.1e-07 3.44e-07 1.87e-07 3.2e-07 9.87e-07 2.98e-07 1.09e-06 3.09e-07 1.26e-06 5.73e-07 1.54e-06 2.19e-07 4.37e-07 6e-07 7.62e-07 5.66e-07 3.95e-07 4.19e-07 2.89e-07 8.19e-07 6.63e-07 4.79e-07 1.79e-06 3.02e-07 6.23e-07 5.31e-07 8.81e-07 9.21e-07 4.9e-07 3.67e-08 1.72e-07 3.58e-07 3.4e-07 3e-07 3.1e-07 1.39e-07 1.38e-07 4.12e-08 2.56e-07 1.22e-06 6.68e-08 1.27e-08 1.72e-07 6.87e-08 1.97e-07 4.41e-08 5.77e-08
ENSG00000111335 OAS2 312788 1.31e-06 9.29e-07 2.79e-07 6.45e-07 2.93e-07 4.46e-07 1.38e-06 3.5e-07 1.28e-06 3.99e-07 1.39e-06 5.98e-07 1.99e-06 2.57e-07 5.65e-07 8.28e-07 7.91e-07 6.13e-07 5.36e-07 6.76e-07 4.43e-07 1.22e-06 9.21e-07 6.28e-07 2.01e-06 4.33e-07 7.55e-07 7.26e-07 1.28e-06 1.11e-06 5.91e-07 1.18e-07 2.19e-07 5.82e-07 4.25e-07 4.15e-07 4.79e-07 1.57e-07 3.5e-07 2.42e-07 3.06e-07 1.62e-06 5.41e-08 4.11e-08 1.69e-07 1.02e-07 2.45e-07 8.97e-08 1.04e-07
ENSG00000111344 RASAL1 154944 4e-06 3.64e-06 5.62e-07 1.97e-06 1.12e-06 8.02e-07 2.52e-06 9.27e-07 2.88e-06 1.67e-06 3.62e-06 2.2e-06 5.56e-06 1.2e-06 1.2e-06 2.34e-06 1.56e-06 2.38e-06 1.44e-06 8.98e-07 1.95e-06 3.58e-06 3.34e-06 1.87e-06 4.66e-06 1.35e-06 1.9e-06 1.48e-06 3.87e-06 2.94e-06 2e-06 4.91e-07 7.75e-07 1.72e-06 1.91e-06 9.19e-07 9.38e-07 4.2e-07 1.34e-06 3.63e-07 6.39e-07 4.1e-06 5.05e-07 1.8e-07 3.58e-07 3.22e-07 6.64e-07 2.49e-07 3.35e-07
ENSG00000123064 DDX54 105704 5.08e-06 5.1e-06 6.64e-07 3.42e-06 1.73e-06 1.54e-06 7.57e-06 1.26e-06 4.8e-06 2.8e-06 6.99e-06 3.37e-06 9.02e-06 1.78e-06 9.3e-07 3.9e-06 2e-06 3.84e-06 1.57e-06 1.64e-06 2.74e-06 5.44e-06 4.68e-06 2e-06 8.88e-06 2.31e-06 2.72e-06 1.73e-06 5.97e-06 4.99e-06 2.56e-06 4.88e-07 8.1e-07 2.33e-06 2.06e-06 1.32e-06 1.11e-06 5.44e-07 1.09e-06 7.4e-07 1.01e-06 7e-06 5.44e-07 1.44e-07 7.64e-07 9.92e-07 1.04e-06 6.58e-07 5.78e-07
ENSG00000139405 RITA1 105657 5.08e-06 5.1e-06 6.64e-07 3.42e-06 1.73e-06 1.54e-06 7.57e-06 1.26e-06 4.8e-06 2.8e-06 6.99e-06 3.37e-06 9.02e-06 1.78e-06 9.3e-07 3.9e-06 2e-06 3.84e-06 1.57e-06 1.64e-06 2.74e-06 5.44e-06 4.68e-06 2e-06 8.88e-06 2.31e-06 2.72e-06 1.67e-06 5.97e-06 4.99e-06 2.56e-06 5.03e-07 8.1e-07 2.33e-06 2.06e-06 1.32e-06 1.11e-06 5.44e-07 1.09e-06 7.4e-07 1.01e-06 7e-06 5.44e-07 1.44e-07 7.64e-07 9.91e-07 1.07e-06 6.58e-07 5.92e-07
ENSG00000139410 SDSL -131197 4.26e-06 4.63e-06 8.3e-07 2.56e-06 1.62e-06 1.35e-06 4.27e-06 9.99e-07 4.94e-06 2.35e-06 4.89e-06 3.52e-06 7.47e-06 2.19e-06 1.49e-06 3.38e-06 2.06e-06 3.4e-06 1.45e-06 1.09e-06 2.98e-06 4.47e-06 4e-06 1.42e-06 5.85e-06 2.01e-06 2.49e-06 1.79e-06 4.53e-06 4.04e-06 2.53e-06 5.58e-07 4.67e-07 1.54e-06 2e-06 9.03e-07 9.83e-07 4.07e-07 9.24e-07 3.71e-07 8.36e-07 5.31e-06 3.63e-07 1.69e-07 6.37e-07 7.78e-07 9.74e-07 4.4e-07 4.23e-07
ENSG00000151176 PLBD2 -67383 7.82e-06 9.35e-06 1.33e-06 5.09e-06 2.36e-06 4.14e-06 1.06e-05 2.23e-06 9.21e-06 4.98e-06 1.19e-05 5.26e-06 1.39e-05 3.97e-06 2.83e-06 6.33e-06 4.09e-06 7.7e-06 2.68e-06 2.8e-06 5.46e-06 8.98e-06 8e-06 3.27e-06 1.37e-05 4.36e-06 4.93e-06 4.06e-06 1.09e-05 7.93e-06 5.1e-06 1.03e-06 1.23e-06 3.5e-06 4.14e-06 2.62e-06 1.82e-06 1.95e-06 2.15e-06 9.86e-07 1.48e-06 1.15e-05 1.27e-06 2.91e-07 9.15e-07 1.67e-06 1.75e-06 7.28e-07 4.51e-07
ENSG00000186710 CFAP73 141325 4.35e-06 4.24e-06 7.79e-07 2.14e-06 1.36e-06 1.03e-06 3.38e-06 9.76e-07 3.9e-06 1.94e-06 4.16e-06 3.04e-06 6.77e-06 1.54e-06 1.43e-06 2.82e-06 1.83e-06 2.75e-06 1.34e-06 9.88e-07 2.61e-06 4.1e-06 3.47e-06 1.62e-06 5.14e-06 1.67e-06 2.43e-06 1.81e-06 4.42e-06 3.38e-06 1.94e-06 5.42e-07 6.12e-07 1.87e-06 1.95e-06 9.43e-07 9.36e-07 4.76e-07 1.04e-06 3.23e-07 7.1e-07 4.67e-06 4.11e-07 1.54e-07 5.96e-07 5.86e-07 8.39e-07 2.26e-07 3.42e-07