Genes within 1Mb (chr12:112607596:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000089009 RPL6 188758 sc-eQTL 6.59e-01 0.0499 0.113 0.059 PB L2
ENSG00000089022 MAPKAPK5 765368 sc-eQTL 4.89e-01 -0.17 0.245 0.059 PB L2
ENSG00000089060 SLC8B1 -751897 sc-eQTL 4.10e-01 -0.192 0.233 0.059 PB L2
ENSG00000089127 OAS1 -299187 sc-eQTL 7.28e-01 0.058 0.167 0.059 PB L2
ENSG00000089234 BRAP 921640 sc-eQTL 7.57e-01 0.0669 0.216 0.059 PB L2
ENSG00000089248 ERP29 594248 sc-eQTL 1.10e-01 -0.209 0.13 0.059 PB L2
ENSG00000111271 ACAD10 921540 sc-eQTL 9.01e-01 0.0293 0.235 0.059 PB L2
ENSG00000111275 ALDH2 840709 sc-eQTL 5.10e-01 0.152 0.23 0.059 PB L2
ENSG00000111300 NAA25 498800 sc-eQTL 2.76e-01 -0.266 0.243 0.059 PB L2
ENSG00000111331 OAS3 -330848 sc-eQTL 4.60e-01 -0.146 0.197 0.059 PB L2
ENSG00000111335 OAS2 -370799 sc-eQTL 8.34e-01 -0.0369 0.176 0.059 PB L2
ENSG00000123064 DDX54 -577883 sc-eQTL 3.59e-01 -0.217 0.235 0.059 PB L2
ENSG00000135144 DTX1 -449113 sc-eQTL 4.65e-02 -0.415 0.206 0.059 PB L2
ENSG00000135148 TRAFD1 482058 sc-eQTL 5.68e-01 -0.143 0.25 0.059 PB L2
ENSG00000139405 RITA1 -577930 sc-eQTL 9.14e-01 -0.0189 0.175 0.059 PB L2
ENSG00000151176 PLBD2 -750970 sc-eQTL 6.69e-01 0.0953 0.223 0.059 PB L2
ENSG00000173064 HECTD4 225157 sc-eQTL 2.38e-02 -0.407 0.178 0.059 PB L2
ENSG00000179295 PTPN11 189245 sc-eQTL 9.14e-01 -0.0261 0.241 0.059 PB L2
ENSG00000186815 TPCN1 -613454 sc-eQTL 2.46e-02 0.511 0.224 0.059 PB L2
ENSG00000198270 TMEM116 594411 sc-eQTL 5.92e-01 0.134 0.25 0.059 PB L2
ENSG00000234608 MAPKAPK5-AS1 764694 sc-eQTL 8.56e-02 0.354 0.204 0.059 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089248 ERP29 594248 eQTL 0.0479 -0.0651 0.0329 0.0 0.0 0.0388
ENSG00000111275 ALDH2 840709 pQTL 0.149 -0.0922 0.0638 0.00176 0.0 0.0423
ENSG00000173064 HECTD4 225157 eQTL 2.16e-12 0.25 0.0351 0.0 0.0 0.0388


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000173064 HECTD4 225157 1.58e-06 1.36e-06 3.04e-07 1.3e-06 3.48e-07 6.28e-07 1.52e-06 4.1e-07 1.47e-06 6.19e-07 2.03e-06 8.56e-07 2.56e-06 3.1e-07 5.01e-07 9.92e-07 8.82e-07 1.05e-06 8.15e-07 5.97e-07 7.68e-07 1.78e-06 1.1e-06 5.54e-07 2.39e-06 6.58e-07 9.45e-07 8.04e-07 1.62e-06 1.3e-06 8.11e-07 2.24e-07 2.57e-07 5.72e-07 5.31e-07 4.62e-07 7.3e-07 2.24e-07 5.08e-07 3.32e-07 3.35e-07 1.8e-06 1.39e-07 4.19e-08 3.22e-07 1.35e-07 2.18e-07 5.35e-08 1.06e-07
ENSG00000258359 \N 937234 2.74e-07 1.19e-07 3.71e-08 1.84e-07 9.01e-08 1e-07 1.49e-07 5.2e-08 1.44e-07 4.74e-08 1.6e-07 8.59e-08 1.41e-07 6.56e-08 5.99e-08 7.37e-08 3.98e-08 1.21e-07 5.36e-08 4.45e-08 1.04e-07 1.27e-07 1.34e-07 3.49e-08 1.37e-07 1.16e-07 1.06e-07 9.36e-08 1.08e-07 1.07e-07 9.64e-08 4.09e-08 3.16e-08 8.44e-08 8.76e-08 3.93e-08 5.02e-08 9.22e-08 6.55e-08 3.77e-08 5.13e-08 1.33e-07 5.08e-08 2.33e-08 5.43e-08 1.83e-08 1.19e-07 3.89e-09 4.85e-08