Genes within 1Mb (chr12:111317407:C:CAT):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000089022 MAPKAPK5 -524821 eQTL 5.29e-09 -0.104 0.0176 0.0 0.0 0.204
ENSG00000111231 GPN3 848139 eQTL 4.31e-02 0.0523 0.0258 0.0 0.0 0.204
ENSG00000111249 CUX2 283242 eQTL 2.57e-04 0.11 0.03 0.0102 0.0152 0.204
ENSG00000111252 SH2B3 -88541 pQTL 6.02e-03 -0.0475 0.0173 0.0 0.0 0.206
ENSG00000111275 ALDH2 -449480 pQTL 5.03e-04 -0.108 0.0309 0.0 0.0 0.206
ENSG00000122986 HVCN1 612457 eQTL 1.32e-01 0.0247 0.0164 0.00117 0.0 0.204
ENSG00000198324 PHETA1 -51714 eQTL 1.58e-14 0.173 0.0222 0.0 0.0 0.204
ENSG00000204856 FAM216A 848626 eQTL 4.49e-02 -0.0494 0.0246 0.0 0.0 0.204
ENSG00000213152 RPL7AP60 -985256 eQTL 3.21e-02 -0.0961 0.0448 0.0 0.0 0.204
ENSG00000257595 LINC02356 -51875 eQTL 1.50e-07 0.202 0.0383 0.0 0.0 0.204


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina