Genes within 1Mb (chr12:110808836:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111199 TRPV4 975435 eQTL 9.34e-04 -0.0914 0.0275 0.0 0.0 0.415
ENSG00000111231 GPN3 339568 eQTL 8.42e-03 -0.0572 0.0216 0.0 0.0 0.415
ENSG00000111237 VPS29 306719 eQTL 1.10e-03 0.0385 0.0118 0.0 0.0 0.415
ENSG00000111275 ALDH2 -958051 pQTL 1.38e-02 0.0654 0.0265 0.0 0.0 0.402
ENSG00000122986 HVCN1 103886 eQTL 1.16e-02 0.0348 0.0137 0.00282 0.0 0.415
ENSG00000139433 GLTP 928295 eQTL 1.50e-04 -0.0599 0.0157 0.0 0.0 0.415
ENSG00000139437 TCHP 908562 eQTL 5.02e-06 0.0738 0.0161 0.0 0.0 0.415
ENSG00000196510 ANAPC7 405106 eQTL 2.22e-03 0.0482 0.0157 0.0 0.0 0.415
ENSG00000196850 PPTC7 225518 eQTL 6.90e-03 -0.0293 0.0108 0.00188 0.00121 0.415
ENSG00000204852 TCTN1 194809 eQTL 7.33e-12 0.102 0.0147 0.029 0.0256 0.415
ENSG00000277595 AC007546.1 776591 eQTL 1.92e-05 -0.0682 0.0159 0.0 0.0 0.415
ENSG00000278993 AC002350.1 307222 eQTL 1.92e-03 0.0891 0.0286 0.00622 0.00413 0.415


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111229 \N 358499 8.43e-07 4.63e-07 7.87e-08 3.57e-07 1.05e-07 1.57e-07 5.01e-07 8.86e-08 2.81e-07 1.78e-07 4.97e-07 2.8e-07 6e-07 1.07e-07 1.32e-07 1.63e-07 1.73e-07 3.12e-07 1.27e-07 1.15e-07 1.76e-07 2.7e-07 3.03e-07 1.15e-07 6.18e-07 2.07e-07 1.97e-07 2.18e-07 2.78e-07 2.75e-07 2.19e-07 5.62e-08 5.58e-08 1.21e-07 3.04e-07 6.18e-08 1e-07 6.78e-08 4.04e-08 5.32e-08 1.16e-07 4.55e-07 2.62e-08 1.99e-08 1.16e-07 1.32e-08 1.03e-07 7.25e-09 5.61e-08
ENSG00000111231 GPN3 339568 9.14e-07 5.33e-07 8.83e-08 3.95e-07 1.07e-07 1.71e-07 5.31e-07 9.91e-08 3.66e-07 2.12e-07 6.56e-07 3.27e-07 7.19e-07 1.1e-07 1.57e-07 1.92e-07 2.48e-07 3.58e-07 1.55e-07 1.39e-07 1.87e-07 3.13e-07 3.19e-07 1.29e-07 7.42e-07 2.32e-07 2.43e-07 2.68e-07 3.58e-07 3.52e-07 2.6e-07 6.84e-08 5.19e-08 1.36e-07 3.36e-07 8.75e-08 1.1e-07 7.98e-08 4e-08 2.59e-08 1.14e-07 5.52e-07 1.65e-08 1.05e-08 1.33e-07 1.84e-08 9.46e-08 1.2e-08 5.54e-08
ENSG00000139437 TCHP 908562 2.64e-07 1.1e-07 3.62e-08 1.82e-07 8.92e-08 9.57e-08 1.38e-07 5.33e-08 1.41e-07 4.38e-08 1.59e-07 7.75e-08 1.3e-07 6.21e-08 5.55e-08 7.5e-08 4.48e-08 1.14e-07 5.19e-08 4.2e-08 1.04e-07 1.28e-07 1.26e-07 4.13e-08 1.31e-07 1.19e-07 1.12e-07 9.15e-08 1.03e-07 1.09e-07 9.58e-08 4.09e-08 3.26e-08 8.65e-08 8.82e-08 3.96e-08 4.84e-08 9.55e-08 7.58e-08 3.55e-08 5.13e-08 1.35e-07 3.91e-08 1.76e-08 5.7e-08 1.68e-08 1.25e-07 3.92e-09 4.73e-08
ENSG00000174437 \N 528080 3.1e-07 1.53e-07 5.35e-08 2.27e-07 1.03e-07 8.21e-08 2.1e-07 5.75e-08 1.44e-07 6.75e-08 1.61e-07 1.19e-07 2.05e-07 8.13e-08 5.94e-08 7.97e-08 4.18e-08 1.56e-07 6.75e-08 5.46e-08 1.22e-07 1.31e-07 1.58e-07 3.07e-08 2.02e-07 1.22e-07 1.17e-07 1.1e-07 1.31e-07 1e-07 1.09e-07 4.93e-08 3.38e-08 9.78e-08 3.97e-08 2.74e-08 4.28e-08 8.89e-08 6.28e-08 5.96e-08 4.73e-08 1.6e-07 5.12e-08 1.07e-08 3.3e-08 1.68e-08 1e-07 2.05e-09 4.83e-08
ENSG00000196850 PPTC7 225518 1.2e-06 9.82e-07 2.75e-07 8.58e-07 2.05e-07 4.39e-07 1.33e-06 3.24e-07 1.2e-06 3.66e-07 1.41e-06 6.06e-07 1.95e-06 2.8e-07 4.36e-07 6.94e-07 8.26e-07 5.75e-07 4.65e-07 6.39e-07 3.99e-07 1.08e-06 8.6e-07 5.76e-07 1.96e-06 2.99e-07 6.81e-07 7.22e-07 1.12e-06 1.08e-06 5.48e-07 1.57e-07 2.36e-07 5.21e-07 5.34e-07 4.12e-07 4.12e-07 1.47e-07 2.44e-07 1.16e-07 2.68e-07 1.52e-06 7.72e-08 5.67e-08 1.86e-07 7.7e-08 1.85e-07 7.69e-08 8.38e-08
ENSG00000204852 TCTN1 194809 1.44e-06 1.13e-06 3.31e-07 1.21e-06 3.09e-07 5.92e-07 1.48e-06 3.69e-07 1.45e-06 4.82e-07 1.95e-06 7.32e-07 2.43e-06 2.89e-07 5.22e-07 9.2e-07 9.01e-07 7.05e-07 7.7e-07 6.33e-07 7.72e-07 1.6e-06 8.89e-07 6.63e-07 2.25e-06 4.27e-07 9.09e-07 8.09e-07 1.49e-06 1.34e-06 7.32e-07 2.42e-07 2.45e-07 6.86e-07 5.39e-07 4.47e-07 5.53e-07 2.29e-07 4.26e-07 3.08e-07 2.58e-07 1.62e-06 9.42e-08 9e-08 2.5e-07 1.24e-07 2.41e-07 3.7e-08 1.13e-07
ENSG00000277595 AC007546.1 776591 2.69e-07 1.19e-07 3.54e-08 1.84e-07 9.01e-08 9.87e-08 1.44e-07 5.19e-08 1.41e-07 4.57e-08 1.6e-07 8.14e-08 1.41e-07 6.38e-08 6e-08 7.17e-08 3.94e-08 1.18e-07 5.21e-08 4.45e-08 1.04e-07 1.26e-07 1.34e-07 3.79e-08 1.37e-07 1.14e-07 1.08e-07 9.57e-08 1.05e-07 1.12e-07 9.91e-08 3.26e-08 3.35e-08 8.68e-08 8.38e-08 3.93e-08 5.03e-08 9.22e-08 6.78e-08 3.87e-08 5.44e-08 1.33e-07 4.14e-08 1.13e-08 4.7e-08 1.83e-08 1.24e-07 3.81e-09 4.81e-08
ENSG00000278993 AC002350.1 307222 1.21e-06 6.76e-07 1.02e-07 4.36e-07 9.29e-08 2.16e-07 6.19e-07 1.45e-07 5.06e-07 2.57e-07 9.46e-07 3.91e-07 9.57e-07 1.6e-07 2.44e-07 2.55e-07 3.93e-07 4.07e-07 2.12e-07 1.82e-07 2.3e-07 4.11e-07 4.2e-07 1.76e-07 1.06e-06 2.49e-07 3.1e-07 3.18e-07 4.39e-07 5.56e-07 3.56e-07 4.03e-08 5.78e-08 1.69e-07 3.82e-07 1.36e-07 1.01e-07 9.71e-08 6.74e-08 1.56e-08 1.79e-07 7.53e-07 2.99e-08 5.83e-09 1.81e-07 1.33e-08 1.03e-07 2.41e-08 6.03e-08