Genes within 1Mb (chr12:110441421:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000110921 MVK 868166 eQTL 2.96e-02 -0.0502 0.023 0.0 0.0 0.384
ENSG00000111199 TRPV4 608020 eQTL 9.83e-03 0.0732 0.0283 0.0 0.0 0.384
ENSG00000111229 ARPC3 -8916 eQTL 4.25e-03 -0.0231 0.00808 0.0 0.0 0.384
ENSG00000111237 VPS29 -60696 eQTL 5.14e-03 -0.0339 0.0121 0.0 0.0 0.384
ENSG00000122986 HVCN1 -263529 eQTL 4.46e-02 -0.0284 0.0141 0.00142 0.0 0.384
ENSG00000139428 MMAB 867841 eQTL 7.55e-03 -0.0548 0.0205 0.00188 0.0 0.384
ENSG00000139433 GLTP 560880 eQTL 2.99e-04 0.0586 0.0161 0.0 0.0 0.384
ENSG00000139437 TCHP 541147 eQTL 1.13e-03 -0.0541 0.0166 0.0 0.0 0.384
ENSG00000196510 ANAPC7 37691 eQTL 7.03e-03 -0.0436 0.0161 0.0 0.0 0.384
ENSG00000196850 PPTC7 -141897 eQTL 1.35e-02 0.0275 0.0111 0.00133 0.0 0.384
ENSG00000204852 TCTN1 -172606 eQTL 2.27e-11 -0.102 0.0151 0.0102 0.00849 0.384
ENSG00000204856 FAM216A -27360 eQTL 1.10e-02 -0.0539 0.0212 0.0 0.0 0.384
ENSG00000277595 AC007546.1 409176 eQTL 4.99e-06 0.0746 0.0163 0.0 0.0 0.384
ENSG00000278993 AC002350.1 -60193 eQTL 5.68e-02 -0.0562 0.0295 0.00125 0.0 0.384


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000110906 \N 964062 2.56e-07 1.08e-07 3.34e-08 1.68e-07 1.02e-07 9.14e-08 1.36e-07 5.24e-08 1.32e-07 3.99e-08 1.59e-07 7.49e-08 1.21e-07 6.07e-08 4.77e-08 7.76e-08 5.15e-08 1.06e-07 5.12e-08 2.85e-08 1.03e-07 1.31e-07 1.31e-07 5.01e-08 1.33e-07 1.09e-07 1.11e-07 8.49e-08 1.05e-07 1.09e-07 9.5e-08 3.88e-08 2.75e-08 8e-08 9.88e-08 4.14e-08 4.95e-08 8.28e-08 8.3e-08 3.64e-08 3.46e-08 1.39e-07 4.34e-08 2.96e-08 1.09e-07 1.8e-08 1.45e-07 4.82e-09 4.61e-08
ENSG00000111229 ARPC3 -8916 3.44e-05 3.25e-05 5.89e-06 1.5e-05 5.42e-06 1.39e-05 4.4e-05 4.28e-06 2.95e-05 1.4e-05 3.69e-05 1.63e-05 4.7e-05 1.3e-05 6.33e-06 1.61e-05 1.58e-05 2.39e-05 7.5e-06 6.43e-06 1.39e-05 2.99e-05 3.11e-05 8.48e-06 4.2e-05 7.42e-06 1.23e-05 1.15e-05 3.15e-05 2.47e-05 1.92e-05 1.63e-06 2.39e-06 6.6e-06 1.11e-05 5.31e-06 2.78e-06 2.99e-06 4.25e-06 3.11e-06 1.7e-06 3.78e-05 3.25e-06 3.55e-07 2.32e-06 3.47e-06 3.74e-06 1.49e-06 1.56e-06
ENSG00000139428 MMAB 867841 2.6e-07 1.08e-07 3.34e-08 1.7e-07 1.02e-07 9.14e-08 1.36e-07 5.24e-08 1.32e-07 4.23e-08 1.61e-07 7.49e-08 1.21e-07 6.07e-08 4.89e-08 7.76e-08 5.15e-08 1.06e-07 5.12e-08 3.15e-08 1.03e-07 1.31e-07 1.31e-07 4.99e-08 1.33e-07 1.09e-07 1.11e-07 8.49e-08 1.05e-07 1.09e-07 9.5e-08 3.76e-08 2.74e-08 8e-08 9.69e-08 4.26e-08 4.85e-08 8.75e-08 8.14e-08 3.34e-08 4.02e-08 1.39e-07 4.51e-08 1.76e-08 1.01e-07 1.78e-08 1.44e-07 4.7e-09 4.74e-08
ENSG00000139433 GLTP 560880 2.66e-07 1.25e-07 3.31e-08 1.8e-07 8.92e-08 9.32e-08 1.42e-07 5.49e-08 1.41e-07 4.38e-08 1.59e-07 8.02e-08 1.3e-07 6.21e-08 5.4e-08 7.5e-08 4.94e-08 1.1e-07 5.19e-08 4.03e-08 1.05e-07 1.3e-07 1.3e-07 4.26e-08 1.33e-07 1.15e-07 1.1e-07 8.71e-08 9.88e-08 1.1e-07 9.73e-08 3.92e-08 2.74e-08 8.82e-08 9.15e-08 3.97e-08 4.72e-08 9.26e-08 8e-08 3.37e-08 3.7e-08 1.35e-07 4.01e-08 1.11e-08 8.03e-08 1.69e-08 1.25e-07 4.33e-09 5.04e-08
ENSG00000174437 \N 160665 1.3e-06 2.16e-06 2.75e-07 1.33e-06 3.51e-07 5.15e-07 1.57e-06 3.68e-07 1.66e-06 4.82e-07 1.99e-06 7.04e-07 2.56e-06 3.1e-07 4.77e-07 9.42e-07 9.2e-07 7.19e-07 8.35e-07 6.9e-07 4.19e-07 1.6e-06 8.89e-07 6.31e-07 2.34e-06 4.28e-07 8.73e-07 7.45e-07 1.35e-06 1.23e-06 8.1e-07 1.85e-07 1.31e-07 6.19e-07 5.32e-07 3.36e-07 4.77e-07 1.5e-07 3.5e-07 2.64e-07 1.67e-07 2.12e-06 6.23e-08 1.68e-07 1.95e-07 1.26e-07 1.6e-07 8.57e-08 5.47e-08
ENSG00000204852 TCTN1 -172606 1.29e-06 1.48e-06 1.87e-07 1.26e-06 2.69e-07 4.59e-07 1.38e-06 3.41e-07 1.49e-06 4.15e-07 1.86e-06 6.03e-07 2.34e-06 2.89e-07 4.12e-07 8.25e-07 7.87e-07 5.88e-07 6.4e-07 6.44e-07 3.24e-07 1.2e-06 8.89e-07 5.79e-07 2.28e-06 3.63e-07 7.06e-07 7.81e-07 1.17e-06 1.06e-06 7.41e-07 1.18e-07 6.78e-08 6.69e-07 5.8e-07 2.76e-07 3.96e-07 1.18e-07 1.96e-07 3.21e-07 1.22e-07 1.58e-06 6.18e-08 1.96e-07 1.71e-07 1.12e-07 1.73e-07 5.66e-08 6.04e-08
ENSG00000204856 FAM216A -27360 1.26e-05 1.71e-05 2.57e-06 9.25e-06 2.36e-06 6.2e-06 2.04e-05 2.51e-06 1.55e-05 6.68e-06 1.94e-05 7.63e-06 2.57e-05 5.53e-06 3.8e-06 8.18e-06 7.72e-06 1.2e-05 3.58e-06 3.36e-06 6.44e-06 1.27e-05 1.47e-05 4.25e-06 2.69e-05 4.65e-06 7.16e-06 5.22e-06 1.57e-05 1.25e-05 1.05e-05 1.07e-06 1.1e-06 3.64e-06 6.33e-06 2.88e-06 1.83e-06 2.02e-06 1.96e-06 1.19e-06 9.3e-07 1.88e-05 1.6e-06 3.18e-07 9.48e-07 2.01e-06 1.79e-06 7.15e-07 4.55e-07