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Genes within 1Mb (chr12:100873545:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 674423 sc-eQTL 2.13e-01 -0.0952 0.0762 0.637 B L1
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 7.63e-01 -0.0196 0.0648 0.637 B L1
ENSG00000111666 CHPT1 -823402 sc-eQTL 6.58e-02 -0.0738 0.0399 0.637 B L1
ENSG00000111670 GNPTAB -957414 sc-eQTL 6.18e-01 0.0291 0.0582 0.637 B L1
ENSG00000120800 UTP20 -406560 sc-eQTL 9.07e-01 -0.00771 0.0662 0.637 B L1
ENSG00000120805 ARL1 -534227 sc-eQTL 9.93e-01 0.000515 0.0569 0.637 B L1
ENSG00000136021 SCYL2 606405 sc-eQTL 8.39e-01 0.0131 0.0646 0.637 B L1
ENSG00000139351 SYCP3 -865927 sc-eQTL 7.08e-01 0.0307 0.0821 0.637 B L1
ENSG00000075089 ACTR6 674423 sc-eQTL 9.63e-01 0.00272 0.0584 0.637 CD4T L1
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 6.56e-01 -0.0242 0.0544 0.637 CD4T L1
ENSG00000111666 CHPT1 -823402 sc-eQTL 3.57e-01 -0.0749 0.0811 0.637 CD4T L1
ENSG00000111670 GNPTAB -957414 sc-eQTL 4.29e-01 -0.0446 0.0562 0.637 CD4T L1
ENSG00000120800 UTP20 -406560 sc-eQTL 7.70e-01 -0.0182 0.0623 0.637 CD4T L1
ENSG00000120805 ARL1 -534227 sc-eQTL 1.86e-01 -0.0806 0.0607 0.637 CD4T L1
ENSG00000136021 SCYL2 606405 sc-eQTL 7.50e-02 -0.0825 0.0461 0.637 CD4T L1
ENSG00000075089 ACTR6 674423 sc-eQTL 6.22e-01 0.0319 0.0644 0.637 CD8T L1
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 4.98e-01 0.0433 0.0637 0.637 CD8T L1
ENSG00000111666 CHPT1 -823402 sc-eQTL 8.73e-01 -0.0129 0.0806 0.637 CD8T L1
ENSG00000111670 GNPTAB -957414 sc-eQTL 6.17e-01 -0.0265 0.0529 0.637 CD8T L1
ENSG00000120800 UTP20 -406560 sc-eQTL 1.67e-02 -0.159 0.0659 0.637 CD8T L1
ENSG00000120805 ARL1 -534227 sc-eQTL 8.75e-02 -0.126 0.0732 0.637 CD8T L1
ENSG00000136021 SCYL2 606405 sc-eQTL 8.09e-01 -0.0145 0.0598 0.637 CD8T L1
ENSG00000075089 ACTR6 674423 sc-eQTL 6.66e-01 0.036 0.0832 0.637 DC L1
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 4.48e-01 0.061 0.0802 0.637 DC L1
ENSG00000111666 CHPT1 -823402 sc-eQTL 6.58e-02 -0.139 0.0753 0.637 DC L1
ENSG00000111670 GNPTAB -957414 sc-eQTL 3.56e-01 -0.0772 0.0834 0.637 DC L1
ENSG00000120800 UTP20 -406560 sc-eQTL 3.48e-01 -0.0841 0.0894 0.637 DC L1
ENSG00000120805 ARL1 -534227 sc-eQTL 5.47e-02 0.177 0.0918 0.637 DC L1
ENSG00000136021 SCYL2 606405 sc-eQTL 2.93e-01 -0.0936 0.0888 0.637 DC L1
ENSG00000139354 GAS2L3 299862 sc-eQTL 4.29e-01 -0.0655 0.0826 0.637 DC L1
ENSG00000075089 ACTR6 674423 sc-eQTL 7.17e-01 0.0268 0.0737 0.637 Mono L1
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 4.50e-01 -0.0458 0.0606 0.637 Mono L1
ENSG00000111666 CHPT1 -823402 sc-eQTL 6.82e-01 -0.0242 0.0589 0.637 Mono L1
ENSG00000111670 GNPTAB -957414 sc-eQTL 9.69e-01 0.00285 0.0739 0.637 Mono L1
ENSG00000120800 UTP20 -406560 sc-eQTL 3.58e-01 0.0757 0.0822 0.637 Mono L1
ENSG00000120805 ARL1 -534227 sc-eQTL 2.54e-01 -0.0865 0.0756 0.637 Mono L1
ENSG00000136021 SCYL2 606405 sc-eQTL 6.04e-01 0.0328 0.0632 0.637 Mono L1
ENSG00000139354 GAS2L3 299862 sc-eQTL 7.49e-01 -0.019 0.0591 0.637 Mono L1
ENSG00000075089 ACTR6 674423 sc-eQTL 7.58e-01 -0.0212 0.0687 0.635 NK L1
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 8.59e-01 0.0101 0.0567 0.635 NK L1
ENSG00000111666 CHPT1 -823402 sc-eQTL 3.75e-01 -0.0627 0.0705 0.635 NK L1
ENSG00000111670 GNPTAB -957414 sc-eQTL 4.15e-01 -0.0417 0.0511 0.635 NK L1
ENSG00000120800 UTP20 -406560 sc-eQTL 6.50e-01 -0.0374 0.0823 0.635 NK L1
ENSG00000120805 ARL1 -534227 sc-eQTL 2.74e-01 -0.0828 0.0755 0.635 NK L1
ENSG00000136021 SCYL2 606405 sc-eQTL 4.23e-01 0.0467 0.0582 0.635 NK L1
ENSG00000075089 ACTR6 674423 sc-eQTL 7.95e-01 0.0214 0.0825 0.637 Other_T L1
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 5.39e-01 -0.0482 0.0783 0.637 Other_T L1
ENSG00000111666 CHPT1 -823402 sc-eQTL 4.60e-01 -0.0594 0.0803 0.637 Other_T L1
ENSG00000111670 GNPTAB -957414 sc-eQTL 8.92e-01 0.0079 0.058 0.637 Other_T L1
ENSG00000120800 UTP20 -406560 sc-eQTL 8.41e-01 -0.0182 0.0906 0.637 Other_T L1
ENSG00000120805 ARL1 -534227 sc-eQTL 3.29e-02 -0.14 0.0654 0.637 Other_T L1
ENSG00000136021 SCYL2 606405 sc-eQTL 9.45e-01 0.00501 0.0722 0.637 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 674423 sc-eQTL 2.47e-01 -0.119 0.102 0.658 B_Activated L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 7.69e-02 0.193 0.109 0.658 B_Activated L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 6.71e-01 -0.0303 0.0712 0.658 B_Activated L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 5.86e-01 -0.0552 0.101 0.658 B_Activated L2
ENSG00000120800 UTP20 -406560 sc-eQTL 1.34e-01 0.146 0.0973 0.658 B_Activated L2
ENSG00000120805 ARL1 -534227 sc-eQTL 9.82e-01 -0.00234 0.101 0.658 B_Activated L2
ENSG00000136021 SCYL2 606405 sc-eQTL 7.29e-02 0.184 0.102 0.658 B_Activated L2
ENSG00000139351 SYCP3 -865927 sc-eQTL 8.63e-01 0.0137 0.0795 0.658 B_Activated L2
ENSG00000075089 ACTR6 674423 sc-eQTL 7.40e-01 -0.0293 0.088 0.637 B_Intermediate L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 6.66e-01 -0.0405 0.0938 0.637 B_Intermediate L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 5.43e-01 -0.0311 0.051 0.637 B_Intermediate L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 5.40e-01 0.0463 0.0754 0.637 B_Intermediate L2
ENSG00000120800 UTP20 -406560 sc-eQTL 9.76e-01 0.00251 0.0839 0.637 B_Intermediate L2
ENSG00000120805 ARL1 -534227 sc-eQTL 7.81e-01 0.0263 0.0944 0.637 B_Intermediate L2
ENSG00000136021 SCYL2 606405 sc-eQTL 4.81e-01 -0.0542 0.0768 0.637 B_Intermediate L2
ENSG00000139351 SYCP3 -865927 sc-eQTL 5.24e-01 0.056 0.0879 0.637 B_Intermediate L2
ENSG00000075089 ACTR6 674423 sc-eQTL 1.64e-01 -0.13 0.0931 0.634 B_Memory L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 9.52e-01 0.00545 0.0901 0.634 B_Memory L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 6.06e-01 -0.031 0.06 0.634 B_Memory L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 6.81e-01 0.0339 0.0822 0.634 B_Memory L2
ENSG00000120800 UTP20 -406560 sc-eQTL 8.38e-01 0.0185 0.0903 0.634 B_Memory L2
ENSG00000120805 ARL1 -534227 sc-eQTL 4.52e-01 0.0676 0.0897 0.634 B_Memory L2
ENSG00000136021 SCYL2 606405 sc-eQTL 5.53e-01 -0.0485 0.0817 0.634 B_Memory L2
ENSG00000139351 SYCP3 -865927 sc-eQTL 7.16e-01 0.0315 0.0867 0.634 B_Memory L2
ENSG00000075089 ACTR6 674423 sc-eQTL 2.32e-01 -0.0993 0.0829 0.637 B_Naive1 L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 4.13e-01 -0.0653 0.0795 0.637 B_Naive1 L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 5.21e-01 -0.0294 0.0457 0.637 B_Naive1 L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 3.42e-01 0.0616 0.0646 0.637 B_Naive1 L2
ENSG00000120800 UTP20 -406560 sc-eQTL 6.72e-01 -0.0326 0.0769 0.637 B_Naive1 L2
ENSG00000120805 ARL1 -534227 sc-eQTL 1.17e-01 -0.134 0.0853 0.637 B_Naive1 L2
ENSG00000136021 SCYL2 606405 sc-eQTL 7.21e-01 -0.0269 0.0753 0.637 B_Naive1 L2
ENSG00000139351 SYCP3 -865927 sc-eQTL 2.56e-01 -0.109 0.0953 0.637 B_Naive1 L2
ENSG00000075089 ACTR6 674423 sc-eQTL 3.43e-01 0.0893 0.0941 0.635 B_Naive2 L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 7.70e-01 -0.0264 0.0903 0.635 B_Naive2 L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 1.64e-01 -0.0655 0.0469 0.635 B_Naive2 L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 3.21e-01 -0.0725 0.0729 0.635 B_Naive2 L2
ENSG00000120800 UTP20 -406560 sc-eQTL 7.69e-01 -0.0248 0.0847 0.635 B_Naive2 L2
ENSG00000120805 ARL1 -534227 sc-eQTL 7.50e-01 0.0297 0.0929 0.635 B_Naive2 L2
ENSG00000136021 SCYL2 606405 sc-eQTL 7.73e-01 -0.0255 0.0883 0.635 B_Naive2 L2
ENSG00000139351 SYCP3 -865927 sc-eQTL 6.02e-01 0.0441 0.0844 0.635 B_Naive2 L2
ENSG00000075089 ACTR6 674423 sc-eQTL 9.95e-01 -0.000561 0.094 0.632 CD4_CTL L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 9.01e-01 -0.0116 0.0932 0.632 CD4_CTL L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 7.28e-01 0.0327 0.094 0.632 CD4_CTL L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 1.96e-01 0.106 0.0818 0.632 CD4_CTL L2
ENSG00000120800 UTP20 -406560 sc-eQTL 4.27e-01 0.0719 0.0902 0.632 CD4_CTL L2
ENSG00000120805 ARL1 -534227 sc-eQTL 6.84e-01 -0.039 0.0957 0.632 CD4_CTL L2
ENSG00000136021 SCYL2 606405 sc-eQTL 1.43e-01 0.134 0.0914 0.632 CD4_CTL L2
ENSG00000075089 ACTR6 674423 sc-eQTL 7.19e-01 0.024 0.0666 0.637 CD4_Naive L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 3.34e-01 -0.0607 0.0627 0.637 CD4_Naive L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 4.77e-01 -0.0566 0.0795 0.637 CD4_Naive L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 8.88e-01 0.00867 0.0614 0.637 CD4_Naive L2
ENSG00000120800 UTP20 -406560 sc-eQTL 7.77e-01 -0.019 0.0668 0.637 CD4_Naive L2
ENSG00000120805 ARL1 -534227 sc-eQTL 2.19e-01 -0.089 0.0722 0.637 CD4_Naive L2
ENSG00000136021 SCYL2 606405 sc-eQTL 5.73e-01 -0.0314 0.0557 0.637 CD4_Naive L2
ENSG00000075089 ACTR6 674423 sc-eQTL 9.13e-01 -0.0078 0.0714 0.637 CD4_TCM L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 5.66e-01 0.0431 0.075 0.637 CD4_TCM L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 3.83e-01 -0.0731 0.0836 0.637 CD4_TCM L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 4.55e-02 -0.129 0.0642 0.637 CD4_TCM L2
ENSG00000120800 UTP20 -406560 sc-eQTL 9.50e-01 0.00508 0.0811 0.637 CD4_TCM L2
ENSG00000120805 ARL1 -534227 sc-eQTL 7.22e-01 -0.027 0.0759 0.637 CD4_TCM L2
ENSG00000136021 SCYL2 606405 sc-eQTL 1.35e-01 -0.0951 0.0634 0.637 CD4_TCM L2
ENSG00000075089 ACTR6 674423 sc-eQTL 8.38e-01 -0.0172 0.084 0.637 CD4_TEM L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 7.50e-01 -0.0266 0.0832 0.637 CD4_TEM L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 2.85e-01 -0.0897 0.0836 0.637 CD4_TEM L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 8.21e-01 -0.0183 0.0807 0.637 CD4_TEM L2
ENSG00000120800 UTP20 -406560 sc-eQTL 4.37e-01 0.0679 0.0872 0.637 CD4_TEM L2
ENSG00000120805 ARL1 -534227 sc-eQTL 8.87e-01 0.0117 0.0825 0.637 CD4_TEM L2
ENSG00000136021 SCYL2 606405 sc-eQTL 1.41e-01 -0.124 0.0841 0.637 CD4_TEM L2
ENSG00000075089 ACTR6 674423 sc-eQTL 3.45e-01 0.0704 0.0743 0.637 CD8_CTL L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 6.77e-01 -0.0318 0.0762 0.637 CD8_CTL L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 2.51e-01 -0.0931 0.081 0.637 CD8_CTL L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 2.04e-02 -0.15 0.0641 0.637 CD8_CTL L2
ENSG00000120800 UTP20 -406560 sc-eQTL 3.69e-01 -0.0789 0.0877 0.637 CD8_CTL L2
ENSG00000120805 ARL1 -534227 sc-eQTL 1.61e-01 -0.122 0.0865 0.637 CD8_CTL L2
ENSG00000136021 SCYL2 606405 sc-eQTL 1.50e-01 0.108 0.0748 0.637 CD8_CTL L2
ENSG00000075089 ACTR6 674423 sc-eQTL 4.64e-01 0.0547 0.0746 0.637 CD8_Naive L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 6.80e-01 0.0331 0.0801 0.637 CD8_Naive L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 7.41e-01 -0.0276 0.0834 0.637 CD8_Naive L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 8.21e-01 0.017 0.0749 0.637 CD8_Naive L2
ENSG00000120800 UTP20 -406560 sc-eQTL 2.35e-01 -0.0946 0.0794 0.637 CD8_Naive L2
ENSG00000120805 ARL1 -534227 sc-eQTL 5.91e-01 -0.0465 0.0864 0.637 CD8_Naive L2
ENSG00000136021 SCYL2 606405 sc-eQTL 7.61e-01 0.0217 0.0712 0.637 CD8_Naive L2
ENSG00000075089 ACTR6 674423 sc-eQTL 3.18e-01 -0.0872 0.087 0.637 CD8_TCM L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 6.39e-01 -0.0438 0.0932 0.637 CD8_TCM L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 5.98e-01 -0.043 0.0814 0.637 CD8_TCM L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 2.83e-01 -0.0905 0.084 0.637 CD8_TCM L2
ENSG00000120800 UTP20 -406560 sc-eQTL 2.43e-01 -0.107 0.0916 0.637 CD8_TCM L2
ENSG00000120805 ARL1 -534227 sc-eQTL 3.71e-01 -0.0808 0.0901 0.637 CD8_TCM L2
ENSG00000136021 SCYL2 606405 sc-eQTL 9.11e-02 -0.156 0.0918 0.637 CD8_TCM L2
ENSG00000075089 ACTR6 674423 sc-eQTL 5.92e-01 0.0471 0.0878 0.639 CD8_TEM L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 4.54e-01 0.0706 0.0942 0.639 CD8_TEM L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 8.91e-02 0.143 0.0837 0.639 CD8_TEM L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 2.04e-01 0.115 0.09 0.639 CD8_TEM L2
ENSG00000120800 UTP20 -406560 sc-eQTL 2.81e-01 -0.104 0.0966 0.639 CD8_TEM L2
ENSG00000120805 ARL1 -534227 sc-eQTL 3.97e-01 -0.0785 0.0925 0.639 CD8_TEM L2
ENSG00000136021 SCYL2 606405 sc-eQTL 3.04e-01 -0.0989 0.096 0.639 CD8_TEM L2
ENSG00000075089 ACTR6 674423 sc-eQTL 9.54e-01 0.00531 0.0913 0.636 MAIT L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 5.73e-01 0.0477 0.0845 0.636 MAIT L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 1.71e-01 -0.118 0.0859 0.636 MAIT L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 5.40e-01 0.0469 0.0764 0.636 MAIT L2
ENSG00000120800 UTP20 -406560 sc-eQTL 4.87e-01 0.0637 0.0915 0.636 MAIT L2
ENSG00000120805 ARL1 -534227 sc-eQTL 3.91e-01 -0.0802 0.0933 0.636 MAIT L2
ENSG00000136021 SCYL2 606405 sc-eQTL 7.71e-01 0.0231 0.0794 0.636 MAIT L2
ENSG00000075089 ACTR6 674423 sc-eQTL 5.55e-01 0.0524 0.0888 0.633 NK_CD56bright L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 5.36e-01 -0.0527 0.0851 0.633 NK_CD56bright L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 9.39e-01 -0.0053 0.0691 0.633 NK_CD56bright L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 4.39e-01 0.0619 0.0797 0.633 NK_CD56bright L2
ENSG00000120800 UTP20 -406560 sc-eQTL 4.61e-01 -0.0688 0.0931 0.633 NK_CD56bright L2
ENSG00000120805 ARL1 -534227 sc-eQTL 1.57e-01 -0.129 0.0906 0.633 NK_CD56bright L2
ENSG00000136021 SCYL2 606405 sc-eQTL 5.09e-01 -0.0566 0.0855 0.633 NK_CD56bright L2
ENSG00000075089 ACTR6 674423 sc-eQTL 9.96e-01 0.000443 0.08 0.636 NK_CD56dim L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 8.27e-01 0.0149 0.0683 0.636 NK_CD56dim L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 2.70e-01 -0.0897 0.0811 0.636 NK_CD56dim L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 3.47e-01 -0.0578 0.0614 0.636 NK_CD56dim L2
ENSG00000120800 UTP20 -406560 sc-eQTL 9.14e-02 0.144 0.0848 0.636 NK_CD56dim L2
ENSG00000120805 ARL1 -534227 sc-eQTL 9.80e-01 -0.00208 0.0826 0.636 NK_CD56dim L2
ENSG00000136021 SCYL2 606405 sc-eQTL 7.57e-01 0.0223 0.0721 0.636 NK_CD56dim L2
ENSG00000075089 ACTR6 674423 sc-eQTL 6.94e-01 -0.0358 0.0909 0.639 NK_HLA L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 3.44e-01 -0.0868 0.0914 0.639 NK_HLA L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 6.61e-01 -0.0388 0.0883 0.639 NK_HLA L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 3.24e-02 -0.151 0.0702 0.639 NK_HLA L2
ENSG00000120800 UTP20 -406560 sc-eQTL 2.20e-01 -0.114 0.0925 0.639 NK_HLA L2
ENSG00000120805 ARL1 -534227 sc-eQTL 2.04e-02 -0.219 0.0936 0.639 NK_HLA L2
ENSG00000136021 SCYL2 606405 sc-eQTL 7.68e-02 0.165 0.093 0.639 NK_HLA L2
ENSG00000075089 ACTR6 674423 sc-eQTL 6.34e-02 -0.149 0.0799 0.636 NK_cytokine L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 3.17e-01 0.0749 0.0748 0.636 NK_cytokine L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 8.05e-01 -0.0196 0.0792 0.636 NK_cytokine L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 8.15e-01 -0.0141 0.0601 0.636 NK_cytokine L2
ENSG00000120800 UTP20 -406560 sc-eQTL 1.42e-02 -0.204 0.0827 0.636 NK_cytokine L2
ENSG00000120805 ARL1 -534227 sc-eQTL 6.78e-01 -0.035 0.0843 0.636 NK_cytokine L2
ENSG00000136021 SCYL2 606405 sc-eQTL 2.72e-01 0.0774 0.0704 0.636 NK_cytokine L2
ENSG00000075089 ACTR6 674423 sc-eQTL 4.69e-01 -0.0908 0.125 0.633 PB L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 5.75e-01 -0.0678 0.121 0.633 PB L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 7.25e-01 -0.0262 0.0743 0.633 PB L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 8.23e-01 -0.0239 0.107 0.633 PB L2
ENSG00000120800 UTP20 -406560 sc-eQTL 9.40e-01 -0.0093 0.123 0.633 PB L2
ENSG00000120805 ARL1 -534227 sc-eQTL 1.75e-01 -0.102 0.0748 0.633 PB L2
ENSG00000136021 SCYL2 606405 sc-eQTL 8.37e-01 0.0264 0.128 0.633 PB L2
ENSG00000139351 SYCP3 -865927 sc-eQTL 8.84e-01 0.015 0.103 0.633 PB L2
ENSG00000075089 ACTR6 674423 sc-eQTL 9.22e-01 0.00888 0.0911 0.635 Pro_T L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 5.49e-01 -0.0545 0.0907 0.635 Pro_T L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 3.17e-01 -0.0834 0.083 0.635 Pro_T L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 9.96e-02 0.101 0.0612 0.635 Pro_T L2
ENSG00000120800 UTP20 -406560 sc-eQTL 7.69e-01 0.0258 0.0879 0.635 Pro_T L2
ENSG00000120805 ARL1 -534227 sc-eQTL 5.85e-01 0.0364 0.0664 0.635 Pro_T L2
ENSG00000136021 SCYL2 606405 sc-eQTL 1.08e-01 -0.142 0.0882 0.635 Pro_T L2
ENSG00000075089 ACTR6 674423 sc-eQTL 3.89e-01 -0.075 0.0868 0.637 Treg L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 2.49e-01 0.103 0.0888 0.637 Treg L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 1.69e-01 -0.128 0.093 0.637 Treg L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 2.79e-02 -0.178 0.0806 0.637 Treg L2
ENSG00000120800 UTP20 -406560 sc-eQTL 7.73e-01 0.0257 0.0888 0.637 Treg L2
ENSG00000120805 ARL1 -534227 sc-eQTL 9.19e-01 -0.00933 0.0919 0.637 Treg L2
ENSG00000136021 SCYL2 606405 sc-eQTL 4.67e-01 -0.0614 0.0842 0.637 Treg L2
ENSG00000075089 ACTR6 674423 sc-eQTL 3.30e-01 0.086 0.0881 0.641 cDC L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 5.81e-01 0.0512 0.0928 0.641 cDC L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 2.89e-02 -0.175 0.0796 0.641 cDC L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 3.39e-01 -0.0996 0.104 0.641 cDC L2
ENSG00000120800 UTP20 -406560 sc-eQTL 5.73e-01 -0.0533 0.0943 0.641 cDC L2
ENSG00000120805 ARL1 -534227 sc-eQTL 1.59e-02 0.234 0.0962 0.641 cDC L2
ENSG00000136021 SCYL2 606405 sc-eQTL 4.04e-01 -0.0739 0.0884 0.641 cDC L2
ENSG00000139354 GAS2L3 299862 sc-eQTL 8.52e-01 -0.0163 0.0875 0.641 cDC L2
ENSG00000075089 ACTR6 674423 sc-eQTL 2.41e-01 0.0887 0.0754 0.637 cMono_IL1B L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 5.85e-01 -0.0332 0.0607 0.637 cMono_IL1B L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 9.57e-01 -0.00322 0.0597 0.637 cMono_IL1B L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 5.34e-01 -0.0492 0.0791 0.637 cMono_IL1B L2
ENSG00000120800 UTP20 -406560 sc-eQTL 8.73e-01 0.0143 0.089 0.637 cMono_IL1B L2
ENSG00000120805 ARL1 -534227 sc-eQTL 9.33e-01 -0.00669 0.0798 0.637 cMono_IL1B L2
ENSG00000136021 SCYL2 606405 sc-eQTL 2.88e-01 0.0782 0.0735 0.637 cMono_IL1B L2
ENSG00000139354 GAS2L3 299862 sc-eQTL 6.20e-01 -0.0318 0.0642 0.637 cMono_IL1B L2
ENSG00000075089 ACTR6 674423 sc-eQTL 5.36e-01 -0.0525 0.0847 0.637 cMono_S100A L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 3.96e-01 -0.0676 0.0796 0.637 cMono_S100A L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 8.27e-01 -0.0145 0.066 0.637 cMono_S100A L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 9.42e-01 0.0058 0.0803 0.637 cMono_S100A L2
ENSG00000120800 UTP20 -406560 sc-eQTL 5.24e-01 0.06 0.094 0.637 cMono_S100A L2
ENSG00000120805 ARL1 -534227 sc-eQTL 5.58e-01 -0.0518 0.0883 0.637 cMono_S100A L2
ENSG00000136021 SCYL2 606405 sc-eQTL 7.69e-01 -0.0237 0.0806 0.637 cMono_S100A L2
ENSG00000139354 GAS2L3 299862 sc-eQTL 5.00e-01 -0.0539 0.0797 0.637 cMono_S100A L2
ENSG00000075089 ACTR6 674423 sc-eQTL 5.01e-01 -0.0729 0.108 0.639 gdT L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 2.99e-01 -0.113 0.109 0.639 gdT L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 5.82e-01 0.0571 0.103 0.639 gdT L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 7.03e-01 0.0298 0.0779 0.639 gdT L2
ENSG00000120800 UTP20 -406560 sc-eQTL 8.86e-01 -0.0148 0.103 0.639 gdT L2
ENSG00000120805 ARL1 -534227 sc-eQTL 5.43e-01 0.0657 0.108 0.639 gdT L2
ENSG00000136021 SCYL2 606405 sc-eQTL 2.84e-01 -0.118 0.11 0.639 gdT L2
ENSG00000075089 ACTR6 674423 sc-eQTL 5.88e-01 -0.0484 0.0893 0.638 intMono L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 1.04e-01 -0.147 0.0903 0.638 intMono L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 5.70e-01 -0.0447 0.0786 0.638 intMono L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 2.60e-01 0.104 0.0921 0.638 intMono L2
ENSG00000120800 UTP20 -406560 sc-eQTL 8.50e-01 0.0164 0.0865 0.638 intMono L2
ENSG00000120805 ARL1 -534227 sc-eQTL 4.72e-03 -0.251 0.0878 0.638 intMono L2
ENSG00000136021 SCYL2 606405 sc-eQTL 3.11e-01 -0.0919 0.0904 0.638 intMono L2
ENSG00000139354 GAS2L3 299862 sc-eQTL 6.73e-01 -0.0354 0.0837 0.638 intMono L2
ENSG00000075089 ACTR6 674423 sc-eQTL 9.25e-01 -0.00803 0.0851 0.636 ncMono L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 5.81e-01 0.0466 0.0844 0.636 ncMono L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 7.93e-01 -0.0209 0.0795 0.636 ncMono L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 1.19e-01 0.148 0.0946 0.636 ncMono L2
ENSG00000120800 UTP20 -406560 sc-eQTL 5.72e-01 0.047 0.0831 0.636 ncMono L2
ENSG00000120805 ARL1 -534227 sc-eQTL 6.15e-01 -0.0403 0.0799 0.636 ncMono L2
ENSG00000136021 SCYL2 606405 sc-eQTL 7.42e-01 0.0288 0.0874 0.636 ncMono L2
ENSG00000139354 GAS2L3 299862 sc-eQTL 5.14e-01 0.0486 0.0744 0.636 ncMono L2
ENSG00000075089 ACTR6 674423 sc-eQTL 9.91e-01 0.00112 0.0939 0.633 pDC L2
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 8.46e-01 0.0176 0.0906 0.633 pDC L2
ENSG00000111666 CHPT1 -823402 sc-eQTL 4.29e-03 -0.252 0.0871 0.633 pDC L2
ENSG00000111670 GNPTAB -957414 sc-eQTL 8.35e-01 -0.0198 0.0946 0.633 pDC L2
ENSG00000120800 UTP20 -406560 sc-eQTL 8.29e-01 0.0204 0.0942 0.633 pDC L2
ENSG00000120805 ARL1 -534227 sc-eQTL 3.38e-01 0.0949 0.0988 0.633 pDC L2
ENSG00000136021 SCYL2 606405 sc-eQTL 7.68e-01 0.0291 0.0985 0.633 pDC L2
ENSG00000139354 GAS2L3 299862 sc-eQTL 5.77e-01 0.0446 0.0797 0.633 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 674423 sc-eQTL 6.72e-02 -0.158 0.0861 0.637 B_Memory LOneK1K
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 8.24e-01 -0.0193 0.0866 0.637 B_Memory LOneK1K
ENSG00000111666 CHPT1 -823402 sc-eQTL 4.49e-01 -0.035 0.0462 0.637 B_Memory LOneK1K
ENSG00000111670 GNPTAB -957414 sc-eQTL 3.26e-01 0.0713 0.0725 0.637 B_Memory LOneK1K
ENSG00000120800 UTP20 -406560 sc-eQTL 2.52e-01 0.0857 0.0746 0.637 B_Memory LOneK1K
ENSG00000120805 ARL1 -534227 sc-eQTL 8.60e-01 0.0149 0.0847 0.637 B_Memory LOneK1K
ENSG00000136021 SCYL2 606405 sc-eQTL 6.88e-01 -0.0273 0.0678 0.637 B_Memory LOneK1K
ENSG00000139351 SYCP3 -865927 sc-eQTL 2.39e-01 0.103 0.087 0.637 B_Memory LOneK1K
ENSG00000075089 ACTR6 674423 sc-eQTL 8.76e-01 -0.0129 0.0823 0.637 B_Naive LOneK1K
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 6.97e-01 -0.0291 0.0747 0.637 B_Naive LOneK1K
ENSG00000111666 CHPT1 -823402 sc-eQTL 1.88e-01 -0.0544 0.0412 0.637 B_Naive LOneK1K
ENSG00000111670 GNPTAB -957414 sc-eQTL 8.23e-01 0.0132 0.0592 0.637 B_Naive LOneK1K
ENSG00000120800 UTP20 -406560 sc-eQTL 4.57e-01 -0.054 0.0724 0.637 B_Naive LOneK1K
ENSG00000120805 ARL1 -534227 sc-eQTL 4.52e-01 -0.0623 0.0826 0.637 B_Naive LOneK1K
ENSG00000136021 SCYL2 606405 sc-eQTL 6.11e-01 0.0375 0.0736 0.637 B_Naive LOneK1K
ENSG00000139351 SYCP3 -865927 sc-eQTL 5.30e-01 -0.0589 0.0937 0.637 B_Naive LOneK1K
ENSG00000075089 ACTR6 674423 sc-eQTL 6.36e-01 0.035 0.0738 0.637 CD14_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 6.53e-01 -0.0264 0.0585 0.637 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -823402 sc-eQTL 9.57e-01 -0.00321 0.0592 0.637 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -957414 sc-eQTL 5.84e-01 -0.0417 0.0761 0.637 CD14_Mono LOneK1K
ENSG00000120800 UTP20 -406560 sc-eQTL 5.46e-01 0.0544 0.0899 0.637 CD14_Mono LOneK1K
ENSG00000120805 ARL1 -534227 sc-eQTL 7.03e-01 -0.0294 0.077 0.637 CD14_Mono LOneK1K
ENSG00000136021 SCYL2 606405 sc-eQTL 3.80e-01 0.0577 0.0656 0.637 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 299862 sc-eQTL 4.13e-01 -0.0517 0.063 0.637 CD14_Mono LOneK1K
ENSG00000075089 ACTR6 674423 sc-eQTL 4.76e-01 -0.0617 0.0865 0.636 CD16_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 3.75e-01 -0.072 0.0809 0.636 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -823402 sc-eQTL 2.64e-01 -0.0818 0.073 0.636 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -957414 sc-eQTL 1.20e-01 0.138 0.0881 0.636 CD16_Mono LOneK1K
ENSG00000120800 UTP20 -406560 sc-eQTL 4.78e-01 0.0605 0.0852 0.636 CD16_Mono LOneK1K
ENSG00000120805 ARL1 -534227 sc-eQTL 4.34e-02 -0.17 0.0839 0.636 CD16_Mono LOneK1K
ENSG00000136021 SCYL2 606405 sc-eQTL 6.27e-01 -0.0391 0.0802 0.636 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 299862 sc-eQTL 5.29e-01 0.0487 0.0773 0.636 CD16_Mono LOneK1K
ENSG00000075089 ACTR6 674423 sc-eQTL 7.42e-01 -0.0235 0.0711 0.636 NK_CD56dim LOneK1K
ENSG00000111647 UHRF1BP1L 730671 sc-eQTL 6.42e-01 0.0278 0.0597 0.636 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -823402 sc-eQTL 3.86e-01 -0.068 0.0784 0.636 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -957414 sc-eQTL 3.05e-01 -0.0552 0.0537 0.636 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 -406560 sc-eQTL 6.74e-01 -0.0348 0.0825 0.636 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 -534227 sc-eQTL 2.89e-01 -0.0812 0.0764 0.636 NK_CD56dim LOneK1K
ENSG00000136021 SCYL2 606405 sc-eQTL 3.41e-01 0.0575 0.0603 0.636 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000214203 RPS4XP1 863707 eQTL 0.0262 -0.0843 0.0378 0.0 0.0 0.342

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000120800 \N -406560 1.22e-06 8.81e-07 1.46e-07 4.88e-07 9.93e-08 3.3e-07 7.1e-07 2.21e-07 7.15e-07 3.17e-07 1.09e-06 4.75e-07 1.23e-06 2.06e-07 3.31e-07 3.96e-07 6.29e-07 4.72e-07 3.43e-07 2.73e-07 2.38e-07 5.37e-07 5.49e-07 3.12e-07 1.54e-06 2.48e-07 4.62e-07 4.23e-07 5.7e-07 8.5e-07 4.39e-07 6.31e-08 4.77e-08 3.17e-07 3.29e-07 1.71e-07 3.1e-07 1.21e-07 1.24e-07 9.67e-09 1.15e-07 1.15e-06 6.17e-08 1.92e-08 1.91e-07 6.87e-08 1.54e-07 3.21e-08 6.03e-08