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Genes within 1Mb (chr12:100868389:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 669267 sc-eQTL 2.95e-01 0.08 0.0762 0.357 B L1
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.39e-01 0.0304 0.0647 0.357 B L1
ENSG00000111666 CHPT1 -828558 sc-eQTL 4.93e-02 0.0787 0.0398 0.357 B L1
ENSG00000111670 GNPTAB -962570 sc-eQTL 4.79e-01 -0.0412 0.0581 0.357 B L1
ENSG00000120800 UTP20 -411716 sc-eQTL 8.63e-01 -0.0114 0.0661 0.357 B L1
ENSG00000120805 ARL1 -539383 sc-eQTL 8.88e-01 0.00802 0.0568 0.357 B L1
ENSG00000136021 SCYL2 601249 sc-eQTL 9.05e-01 -0.00769 0.0645 0.357 B L1
ENSG00000139351 SYCP3 -871083 sc-eQTL 8.68e-01 -0.0136 0.0819 0.357 B L1
ENSG00000075089 ACTR6 669267 sc-eQTL 8.74e-01 -0.00926 0.0584 0.357 CD4T L1
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 7.95e-01 0.0142 0.0544 0.357 CD4T L1
ENSG00000111666 CHPT1 -828558 sc-eQTL 3.58e-01 0.0747 0.0811 0.357 CD4T L1
ENSG00000111670 GNPTAB -962570 sc-eQTL 4.13e-01 0.0462 0.0562 0.357 CD4T L1
ENSG00000120800 UTP20 -411716 sc-eQTL 8.44e-01 0.0123 0.0623 0.357 CD4T L1
ENSG00000120805 ARL1 -539383 sc-eQTL 1.94e-01 0.079 0.0607 0.357 CD4T L1
ENSG00000136021 SCYL2 601249 sc-eQTL 5.56e-02 0.0887 0.0461 0.357 CD4T L1
ENSG00000075089 ACTR6 669267 sc-eQTL 5.14e-01 -0.042 0.0642 0.357 CD8T L1
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 5.28e-01 -0.0402 0.0636 0.357 CD8T L1
ENSG00000111666 CHPT1 -828558 sc-eQTL 8.23e-01 0.018 0.0804 0.357 CD8T L1
ENSG00000111670 GNPTAB -962570 sc-eQTL 6.70e-01 0.0225 0.0528 0.357 CD8T L1
ENSG00000120800 UTP20 -411716 sc-eQTL 2.26e-02 0.151 0.0658 0.357 CD8T L1
ENSG00000120805 ARL1 -539383 sc-eQTL 9.01e-02 0.124 0.073 0.357 CD8T L1
ENSG00000136021 SCYL2 601249 sc-eQTL 8.39e-01 0.0122 0.0596 0.357 CD8T L1
ENSG00000075089 ACTR6 669267 sc-eQTL 7.24e-01 -0.0294 0.083 0.356 DC L1
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 5.42e-01 -0.0489 0.08 0.356 DC L1
ENSG00000111666 CHPT1 -828558 sc-eQTL 6.63e-02 0.139 0.0751 0.356 DC L1
ENSG00000111670 GNPTAB -962570 sc-eQTL 3.14e-01 0.0838 0.0831 0.356 DC L1
ENSG00000120800 UTP20 -411716 sc-eQTL 3.60e-01 0.0817 0.0891 0.356 DC L1
ENSG00000120805 ARL1 -539383 sc-eQTL 7.53e-02 -0.164 0.0917 0.356 DC L1
ENSG00000136021 SCYL2 601249 sc-eQTL 2.08e-01 0.112 0.0884 0.356 DC L1
ENSG00000139354 GAS2L3 294706 sc-eQTL 6.02e-01 0.0431 0.0825 0.356 DC L1
ENSG00000075089 ACTR6 669267 sc-eQTL 5.84e-01 -0.0405 0.0738 0.357 Mono L1
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 4.87e-01 0.0423 0.0607 0.357 Mono L1
ENSG00000111666 CHPT1 -828558 sc-eQTL 5.53e-01 0.035 0.059 0.357 Mono L1
ENSG00000111670 GNPTAB -962570 sc-eQTL 9.39e-01 0.00571 0.074 0.357 Mono L1
ENSG00000120800 UTP20 -411716 sc-eQTL 2.62e-01 -0.0926 0.0823 0.357 Mono L1
ENSG00000120805 ARL1 -539383 sc-eQTL 2.67e-01 0.0843 0.0757 0.357 Mono L1
ENSG00000136021 SCYL2 601249 sc-eQTL 5.76e-01 -0.0354 0.0633 0.357 Mono L1
ENSG00000139354 GAS2L3 294706 sc-eQTL 7.69e-01 0.0174 0.0592 0.357 Mono L1
ENSG00000075089 ACTR6 669267 sc-eQTL 6.71e-01 0.0291 0.0684 0.358 NK L1
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 8.88e-01 -0.00798 0.0565 0.358 NK L1
ENSG00000111666 CHPT1 -828558 sc-eQTL 3.75e-01 0.0624 0.0703 0.358 NK L1
ENSG00000111670 GNPTAB -962570 sc-eQTL 4.17e-01 0.0414 0.051 0.358 NK L1
ENSG00000120800 UTP20 -411716 sc-eQTL 7.86e-01 0.0223 0.0821 0.358 NK L1
ENSG00000120805 ARL1 -539383 sc-eQTL 3.25e-01 0.0742 0.0753 0.358 NK L1
ENSG00000136021 SCYL2 601249 sc-eQTL 5.31e-01 -0.0364 0.0581 0.358 NK L1
ENSG00000075089 ACTR6 669267 sc-eQTL 8.13e-01 -0.0194 0.0822 0.357 Other_T L1
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 4.66e-01 0.057 0.078 0.357 Other_T L1
ENSG00000111666 CHPT1 -828558 sc-eQTL 3.67e-01 0.0723 0.08 0.357 Other_T L1
ENSG00000111670 GNPTAB -962570 sc-eQTL 9.66e-01 0.00246 0.0578 0.357 Other_T L1
ENSG00000120800 UTP20 -411716 sc-eQTL 9.70e-01 0.00341 0.0903 0.357 Other_T L1
ENSG00000120805 ARL1 -539383 sc-eQTL 5.19e-02 0.128 0.0653 0.357 Other_T L1
ENSG00000136021 SCYL2 601249 sc-eQTL 9.31e-01 0.00621 0.0719 0.357 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 669267 sc-eQTL 1.82e-01 0.137 0.102 0.334 B_Activated L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 1.01e-01 -0.18 0.109 0.334 B_Activated L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 6.11e-01 0.0363 0.0714 0.334 B_Activated L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 5.73e-01 0.0573 0.101 0.334 B_Activated L2
ENSG00000120800 UTP20 -411716 sc-eQTL 1.60e-01 -0.138 0.0976 0.334 B_Activated L2
ENSG00000120805 ARL1 -539383 sc-eQTL 9.22e-01 0.00989 0.101 0.334 B_Activated L2
ENSG00000136021 SCYL2 601249 sc-eQTL 1.38e-01 -0.153 0.103 0.334 B_Activated L2
ENSG00000139351 SYCP3 -871083 sc-eQTL 9.59e-01 0.00405 0.0797 0.334 B_Activated L2
ENSG00000075089 ACTR6 669267 sc-eQTL 6.34e-01 0.0418 0.0877 0.356 B_Intermediate L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 5.82e-01 0.0515 0.0935 0.356 B_Intermediate L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 5.10e-01 0.0335 0.0509 0.356 B_Intermediate L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 4.03e-01 -0.0629 0.0751 0.356 B_Intermediate L2
ENSG00000120800 UTP20 -411716 sc-eQTL 9.24e-01 -0.00802 0.0836 0.356 B_Intermediate L2
ENSG00000120805 ARL1 -539383 sc-eQTL 7.91e-01 -0.025 0.0941 0.356 B_Intermediate L2
ENSG00000136021 SCYL2 601249 sc-eQTL 4.63e-01 0.0564 0.0766 0.356 B_Intermediate L2
ENSG00000139351 SYCP3 -871083 sc-eQTL 6.46e-01 -0.0403 0.0877 0.356 B_Intermediate L2
ENSG00000075089 ACTR6 669267 sc-eQTL 2.39e-01 0.11 0.093 0.36 B_Memory L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 9.72e-01 -0.00314 0.0899 0.36 B_Memory L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 5.40e-01 0.0367 0.0599 0.36 B_Memory L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 6.19e-01 -0.0408 0.082 0.36 B_Memory L2
ENSG00000120800 UTP20 -411716 sc-eQTL 6.74e-01 -0.038 0.09 0.36 B_Memory L2
ENSG00000120805 ARL1 -539383 sc-eQTL 3.57e-01 -0.0825 0.0894 0.36 B_Memory L2
ENSG00000136021 SCYL2 601249 sc-eQTL 4.77e-01 0.0581 0.0814 0.36 B_Memory L2
ENSG00000139351 SYCP3 -871083 sc-eQTL 7.72e-01 -0.0251 0.0864 0.36 B_Memory L2
ENSG00000075089 ACTR6 669267 sc-eQTL 2.90e-01 0.0877 0.0827 0.357 B_Naive1 L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 4.63e-01 0.0584 0.0793 0.357 B_Naive1 L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 4.44e-01 0.035 0.0456 0.357 B_Naive1 L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 4.46e-01 -0.0492 0.0645 0.357 B_Naive1 L2
ENSG00000120800 UTP20 -411716 sc-eQTL 9.99e-01 7.2e-05 0.0767 0.357 B_Naive1 L2
ENSG00000120805 ARL1 -539383 sc-eQTL 8.86e-02 0.145 0.085 0.357 B_Naive1 L2
ENSG00000136021 SCYL2 601249 sc-eQTL 7.38e-01 0.0252 0.0751 0.357 B_Naive1 L2
ENSG00000139351 SYCP3 -871083 sc-eQTL 1.39e-01 0.141 0.0949 0.357 B_Naive1 L2
ENSG00000075089 ACTR6 669267 sc-eQTL 2.44e-01 -0.11 0.0938 0.358 B_Naive2 L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 5.35e-01 0.056 0.0901 0.358 B_Naive2 L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 1.37e-01 0.0699 0.0468 0.358 B_Naive2 L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 4.38e-01 0.0565 0.0728 0.358 B_Naive2 L2
ENSG00000120800 UTP20 -411716 sc-eQTL 9.19e-01 0.00865 0.0845 0.358 B_Naive2 L2
ENSG00000120805 ARL1 -539383 sc-eQTL 8.73e-01 -0.0148 0.0928 0.358 B_Naive2 L2
ENSG00000136021 SCYL2 601249 sc-eQTL 8.05e-01 0.0218 0.0881 0.358 B_Naive2 L2
ENSG00000139351 SYCP3 -871083 sc-eQTL 4.91e-01 -0.0581 0.0842 0.358 B_Naive2 L2
ENSG00000075089 ACTR6 669267 sc-eQTL 9.66e-01 -0.00401 0.0937 0.361 CD4_CTL L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 8.20e-01 0.0211 0.0928 0.361 CD4_CTL L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 7.02e-01 -0.0358 0.0936 0.361 CD4_CTL L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 1.78e-01 -0.11 0.0815 0.361 CD4_CTL L2
ENSG00000120800 UTP20 -411716 sc-eQTL 4.90e-01 -0.0622 0.0899 0.361 CD4_CTL L2
ENSG00000120805 ARL1 -539383 sc-eQTL 5.55e-01 0.0563 0.0953 0.361 CD4_CTL L2
ENSG00000136021 SCYL2 601249 sc-eQTL 1.56e-01 -0.13 0.0911 0.361 CD4_CTL L2
ENSG00000075089 ACTR6 669267 sc-eQTL 5.88e-01 -0.0361 0.0666 0.357 CD4_Naive L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 3.95e-01 0.0535 0.0628 0.357 CD4_Naive L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 4.95e-01 0.0544 0.0796 0.357 CD4_Naive L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 8.54e-01 -0.0113 0.0614 0.357 CD4_Naive L2
ENSG00000120800 UTP20 -411716 sc-eQTL 7.50e-01 0.0213 0.0669 0.357 CD4_Naive L2
ENSG00000120805 ARL1 -539383 sc-eQTL 1.99e-01 0.0931 0.0722 0.357 CD4_Naive L2
ENSG00000136021 SCYL2 601249 sc-eQTL 5.61e-01 0.0324 0.0557 0.357 CD4_Naive L2
ENSG00000075089 ACTR6 669267 sc-eQTL 9.20e-01 0.0072 0.0713 0.357 CD4_TCM L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.72e-01 -0.0318 0.0749 0.357 CD4_TCM L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 3.45e-01 0.079 0.0834 0.357 CD4_TCM L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 3.98e-02 0.133 0.0641 0.357 CD4_TCM L2
ENSG00000120800 UTP20 -411716 sc-eQTL 8.96e-01 -0.0106 0.081 0.357 CD4_TCM L2
ENSG00000120805 ARL1 -539383 sc-eQTL 8.87e-01 0.0108 0.0758 0.357 CD4_TCM L2
ENSG00000136021 SCYL2 601249 sc-eQTL 1.58e-01 0.0896 0.0633 0.357 CD4_TCM L2
ENSG00000075089 ACTR6 669267 sc-eQTL 8.27e-01 0.0184 0.0839 0.357 CD4_TEM L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 9.87e-01 -0.0014 0.0831 0.357 CD4_TEM L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 2.26e-01 0.101 0.0833 0.357 CD4_TEM L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 7.33e-01 0.0275 0.0805 0.357 CD4_TEM L2
ENSG00000120800 UTP20 -411716 sc-eQTL 3.76e-01 -0.0772 0.087 0.357 CD4_TEM L2
ENSG00000120805 ARL1 -539383 sc-eQTL 9.96e-01 0.000453 0.0823 0.357 CD4_TEM L2
ENSG00000136021 SCYL2 601249 sc-eQTL 1.14e-01 0.133 0.0839 0.357 CD4_TEM L2
ENSG00000075089 ACTR6 669267 sc-eQTL 2.90e-01 -0.0785 0.074 0.357 CD8_CTL L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.25e-01 0.0371 0.0759 0.357 CD8_CTL L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 2.17e-01 0.0998 0.0806 0.357 CD8_CTL L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 1.83e-02 0.152 0.0639 0.357 CD8_CTL L2
ENSG00000120800 UTP20 -411716 sc-eQTL 3.59e-01 0.0804 0.0873 0.357 CD8_CTL L2
ENSG00000120805 ARL1 -539383 sc-eQTL 1.47e-01 0.125 0.0861 0.357 CD8_CTL L2
ENSG00000136021 SCYL2 601249 sc-eQTL 1.51e-01 -0.107 0.0745 0.357 CD8_CTL L2
ENSG00000075089 ACTR6 669267 sc-eQTL 3.34e-01 -0.0718 0.0742 0.357 CD8_Naive L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.71e-01 -0.0339 0.0797 0.357 CD8_Naive L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 8.06e-01 0.0204 0.083 0.357 CD8_Naive L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 7.31e-01 -0.0257 0.0746 0.357 CD8_Naive L2
ENSG00000120800 UTP20 -411716 sc-eQTL 3.10e-01 0.0805 0.0791 0.357 CD8_Naive L2
ENSG00000120805 ARL1 -539383 sc-eQTL 5.33e-01 0.0537 0.086 0.357 CD8_Naive L2
ENSG00000136021 SCYL2 601249 sc-eQTL 7.36e-01 -0.0239 0.0709 0.357 CD8_Naive L2
ENSG00000075089 ACTR6 669267 sc-eQTL 2.58e-01 0.0982 0.0867 0.356 CD8_TCM L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.64e-01 0.0404 0.0928 0.356 CD8_TCM L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 6.26e-01 0.0396 0.0811 0.356 CD8_TCM L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 3.64e-01 0.0763 0.0838 0.356 CD8_TCM L2
ENSG00000120800 UTP20 -411716 sc-eQTL 3.52e-01 0.0853 0.0914 0.356 CD8_TCM L2
ENSG00000120805 ARL1 -539383 sc-eQTL 3.10e-01 0.0914 0.0898 0.356 CD8_TCM L2
ENSG00000136021 SCYL2 601249 sc-eQTL 1.38e-01 0.137 0.0916 0.356 CD8_TCM L2
ENSG00000075089 ACTR6 669267 sc-eQTL 6.55e-01 -0.0392 0.0874 0.354 CD8_TEM L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 5.05e-01 -0.0626 0.0937 0.354 CD8_TEM L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 1.29e-01 -0.127 0.0835 0.354 CD8_TEM L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 2.60e-01 -0.101 0.0896 0.354 CD8_TEM L2
ENSG00000120800 UTP20 -411716 sc-eQTL 3.51e-01 0.0899 0.0963 0.354 CD8_TEM L2
ENSG00000120805 ARL1 -539383 sc-eQTL 4.28e-01 0.0732 0.0921 0.354 CD8_TEM L2
ENSG00000136021 SCYL2 601249 sc-eQTL 2.96e-01 0.1 0.0955 0.354 CD8_TEM L2
ENSG00000075089 ACTR6 669267 sc-eQTL 9.61e-01 -0.00449 0.0911 0.357 MAIT L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 7.26e-01 -0.0297 0.0844 0.357 MAIT L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 1.43e-01 0.126 0.0857 0.357 MAIT L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 6.79e-01 -0.0316 0.0763 0.357 MAIT L2
ENSG00000120800 UTP20 -411716 sc-eQTL 3.45e-01 -0.0864 0.0913 0.357 MAIT L2
ENSG00000120805 ARL1 -539383 sc-eQTL 4.73e-01 0.067 0.0932 0.357 MAIT L2
ENSG00000136021 SCYL2 601249 sc-eQTL 9.07e-01 -0.00925 0.0792 0.357 MAIT L2
ENSG00000075089 ACTR6 669267 sc-eQTL 5.08e-01 -0.0588 0.0887 0.36 NK_CD56bright L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 5.54e-01 0.0504 0.085 0.36 NK_CD56bright L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 8.54e-01 -0.0127 0.069 0.36 NK_CD56bright L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 3.45e-01 -0.0753 0.0795 0.36 NK_CD56bright L2
ENSG00000120800 UTP20 -411716 sc-eQTL 6.32e-01 0.0446 0.093 0.36 NK_CD56bright L2
ENSG00000120805 ARL1 -539383 sc-eQTL 2.30e-01 0.109 0.0906 0.36 NK_CD56bright L2
ENSG00000136021 SCYL2 601249 sc-eQTL 6.90e-01 0.0341 0.0855 0.36 NK_CD56bright L2
ENSG00000075089 ACTR6 669267 sc-eQTL 9.88e-01 -0.00117 0.0798 0.358 NK_CD56dim L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 8.47e-01 -0.0132 0.0681 0.358 NK_CD56dim L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 2.29e-01 0.0975 0.0809 0.358 NK_CD56dim L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 3.09e-01 0.0625 0.0612 0.358 NK_CD56dim L2
ENSG00000120800 UTP20 -411716 sc-eQTL 8.90e-02 -0.145 0.0846 0.358 NK_CD56dim L2
ENSG00000120805 ARL1 -539383 sc-eQTL 9.20e-01 -0.00831 0.0824 0.358 NK_CD56dim L2
ENSG00000136021 SCYL2 601249 sc-eQTL 8.88e-01 -0.0101 0.0719 0.358 NK_CD56dim L2
ENSG00000075089 ACTR6 669267 sc-eQTL 4.94e-01 0.0618 0.0902 0.354 NK_HLA L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 4.55e-01 0.0681 0.091 0.354 NK_HLA L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 7.57e-01 0.0272 0.0878 0.354 NK_HLA L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 4.10e-02 0.144 0.0698 0.354 NK_HLA L2
ENSG00000120800 UTP20 -411716 sc-eQTL 4.06e-01 0.0767 0.0922 0.354 NK_HLA L2
ENSG00000120805 ARL1 -539383 sc-eQTL 1.77e-02 0.222 0.093 0.354 NK_HLA L2
ENSG00000136021 SCYL2 601249 sc-eQTL 5.38e-02 -0.179 0.0923 0.354 NK_HLA L2
ENSG00000075089 ACTR6 669267 sc-eQTL 4.96e-02 0.157 0.0796 0.358 NK_cytokine L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 4.01e-01 -0.0629 0.0746 0.358 NK_cytokine L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 7.84e-01 0.0216 0.079 0.358 NK_cytokine L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 7.46e-01 0.0194 0.06 0.358 NK_cytokine L2
ENSG00000120800 UTP20 -411716 sc-eQTL 1.75e-02 0.198 0.0825 0.358 NK_cytokine L2
ENSG00000120805 ARL1 -539383 sc-eQTL 6.47e-01 0.0385 0.0841 0.358 NK_cytokine L2
ENSG00000136021 SCYL2 601249 sc-eQTL 4.31e-01 -0.0554 0.0703 0.358 NK_cytokine L2
ENSG00000075089 ACTR6 669267 sc-eQTL 6.00e-01 0.0665 0.127 0.363 PB L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.54e-01 0.0548 0.122 0.363 PB L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 4.50e-01 0.0569 0.075 0.363 PB L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 8.34e-01 0.0227 0.108 0.363 PB L2
ENSG00000120800 UTP20 -411716 sc-eQTL 8.80e-01 -0.0187 0.124 0.363 PB L2
ENSG00000120805 ARL1 -539383 sc-eQTL 1.70e-01 0.104 0.0757 0.363 PB L2
ENSG00000136021 SCYL2 601249 sc-eQTL 8.22e-01 -0.0293 0.13 0.363 PB L2
ENSG00000139351 SYCP3 -871083 sc-eQTL 8.71e-01 -0.017 0.104 0.363 PB L2
ENSG00000075089 ACTR6 669267 sc-eQTL 9.29e-01 -0.00806 0.0909 0.359 Pro_T L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.20e-01 0.045 0.0906 0.359 Pro_T L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 3.29e-01 0.0811 0.0829 0.359 Pro_T L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 1.38e-01 -0.091 0.0611 0.359 Pro_T L2
ENSG00000120800 UTP20 -411716 sc-eQTL 7.21e-01 -0.0313 0.0877 0.359 Pro_T L2
ENSG00000120805 ARL1 -539383 sc-eQTL 4.68e-01 -0.0482 0.0663 0.359 Pro_T L2
ENSG00000136021 SCYL2 601249 sc-eQTL 1.40e-01 0.13 0.0881 0.359 Pro_T L2
ENSG00000075089 ACTR6 669267 sc-eQTL 3.85e-01 0.0755 0.0868 0.357 Treg L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 1.56e-01 -0.126 0.0886 0.357 Treg L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 1.33e-01 0.14 0.0928 0.357 Treg L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 3.88e-02 0.168 0.0807 0.357 Treg L2
ENSG00000120800 UTP20 -411716 sc-eQTL 7.65e-01 -0.0266 0.0888 0.357 Treg L2
ENSG00000120805 ARL1 -539383 sc-eQTL 8.61e-01 0.0161 0.0918 0.357 Treg L2
ENSG00000136021 SCYL2 601249 sc-eQTL 3.38e-01 0.0807 0.084 0.357 Treg L2
ENSG00000075089 ACTR6 669267 sc-eQTL 4.22e-01 -0.0707 0.0879 0.351 cDC L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.77e-01 -0.0386 0.0924 0.351 cDC L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 2.11e-02 0.184 0.0792 0.351 cDC L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 3.24e-01 0.102 0.103 0.351 cDC L2
ENSG00000120800 UTP20 -411716 sc-eQTL 6.23e-01 0.0463 0.0939 0.351 cDC L2
ENSG00000120805 ARL1 -539383 sc-eQTL 2.31e-02 -0.22 0.096 0.351 cDC L2
ENSG00000136021 SCYL2 601249 sc-eQTL 3.38e-01 0.0845 0.088 0.351 cDC L2
ENSG00000139354 GAS2L3 294706 sc-eQTL 8.72e-01 -0.014 0.0871 0.351 cDC L2
ENSG00000075089 ACTR6 669267 sc-eQTL 1.69e-01 -0.104 0.0753 0.357 cMono_IL1B L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.51e-01 0.0275 0.0608 0.357 cMono_IL1B L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 7.66e-01 0.0178 0.0597 0.357 cMono_IL1B L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 3.97e-01 0.0672 0.0791 0.357 cMono_IL1B L2
ENSG00000120800 UTP20 -411716 sc-eQTL 7.10e-01 -0.0331 0.0891 0.357 cMono_IL1B L2
ENSG00000120805 ARL1 -539383 sc-eQTL 9.97e-01 0.00029 0.0798 0.357 cMono_IL1B L2
ENSG00000136021 SCYL2 601249 sc-eQTL 2.95e-01 -0.0773 0.0736 0.357 cMono_IL1B L2
ENSG00000139354 GAS2L3 294706 sc-eQTL 6.22e-01 0.0317 0.0642 0.357 cMono_IL1B L2
ENSG00000075089 ACTR6 669267 sc-eQTL 6.25e-01 0.0415 0.0848 0.357 cMono_S100A L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 3.62e-01 0.0727 0.0796 0.357 cMono_S100A L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 7.12e-01 0.0244 0.066 0.357 cMono_S100A L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 9.93e-01 -0.000682 0.0803 0.357 cMono_S100A L2
ENSG00000120800 UTP20 -411716 sc-eQTL 3.60e-01 -0.0861 0.0939 0.357 cMono_S100A L2
ENSG00000120805 ARL1 -539383 sc-eQTL 5.69e-01 0.0504 0.0884 0.357 cMono_S100A L2
ENSG00000136021 SCYL2 601249 sc-eQTL 7.95e-01 0.021 0.0807 0.357 cMono_S100A L2
ENSG00000139354 GAS2L3 294706 sc-eQTL 6.09e-01 0.0409 0.0798 0.357 cMono_S100A L2
ENSG00000075089 ACTR6 669267 sc-eQTL 5.42e-01 0.0661 0.108 0.352 gdT L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 2.76e-01 0.118 0.108 0.352 gdT L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 6.22e-01 -0.051 0.103 0.352 gdT L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 8.09e-01 -0.0189 0.0778 0.352 gdT L2
ENSG00000120800 UTP20 -411716 sc-eQTL 8.86e-01 0.0147 0.103 0.352 gdT L2
ENSG00000120805 ARL1 -539383 sc-eQTL 4.76e-01 -0.0769 0.108 0.352 gdT L2
ENSG00000136021 SCYL2 601249 sc-eQTL 4.02e-01 0.0922 0.11 0.352 gdT L2
ENSG00000075089 ACTR6 669267 sc-eQTL 6.35e-01 0.0425 0.0894 0.356 intMono L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 1.43e-01 0.133 0.0905 0.356 intMono L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 4.81e-01 0.0556 0.0787 0.356 intMono L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 2.72e-01 -0.102 0.0922 0.356 intMono L2
ENSG00000120800 UTP20 -411716 sc-eQTL 8.16e-01 -0.0201 0.0866 0.356 intMono L2
ENSG00000120805 ARL1 -539383 sc-eQTL 5.32e-03 0.248 0.0879 0.356 intMono L2
ENSG00000136021 SCYL2 601249 sc-eQTL 3.25e-01 0.0893 0.0905 0.356 intMono L2
ENSG00000139354 GAS2L3 294706 sc-eQTL 6.21e-01 0.0414 0.0837 0.356 intMono L2
ENSG00000075089 ACTR6 669267 sc-eQTL 9.15e-01 -0.00907 0.0849 0.357 ncMono L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.27e-01 -0.041 0.0842 0.357 ncMono L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 7.76e-01 0.0226 0.0793 0.357 ncMono L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 1.58e-01 -0.134 0.0945 0.357 ncMono L2
ENSG00000120800 UTP20 -411716 sc-eQTL 4.38e-01 -0.0644 0.0829 0.357 ncMono L2
ENSG00000120805 ARL1 -539383 sc-eQTL 6.96e-01 0.0313 0.0798 0.357 ncMono L2
ENSG00000136021 SCYL2 601249 sc-eQTL 6.51e-01 -0.0395 0.0871 0.357 ncMono L2
ENSG00000139354 GAS2L3 294706 sc-eQTL 4.41e-01 -0.0573 0.0742 0.357 ncMono L2
ENSG00000075089 ACTR6 669267 sc-eQTL 7.54e-01 -0.0294 0.0939 0.359 pDC L2
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 9.39e-01 -0.00695 0.0907 0.359 pDC L2
ENSG00000111666 CHPT1 -828558 sc-eQTL 6.37e-03 0.242 0.0874 0.359 pDC L2
ENSG00000111670 GNPTAB -962570 sc-eQTL 8.55e-01 0.0173 0.0947 0.359 pDC L2
ENSG00000120800 UTP20 -411716 sc-eQTL 7.46e-01 -0.0306 0.0943 0.359 pDC L2
ENSG00000120805 ARL1 -539383 sc-eQTL 3.80e-01 -0.0871 0.099 0.359 pDC L2
ENSG00000136021 SCYL2 601249 sc-eQTL 9.94e-01 -0.000734 0.0986 0.359 pDC L2
ENSG00000139354 GAS2L3 294706 sc-eQTL 6.69e-01 -0.0342 0.0798 0.359 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 669267 sc-eQTL 7.28e-02 0.155 0.086 0.357 B_Memory LOneK1K
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 7.58e-01 0.0266 0.0864 0.357 B_Memory LOneK1K
ENSG00000111666 CHPT1 -828558 sc-eQTL 3.83e-01 0.0403 0.0461 0.357 B_Memory LOneK1K
ENSG00000111670 GNPTAB -962570 sc-eQTL 2.24e-01 -0.0882 0.0723 0.357 B_Memory LOneK1K
ENSG00000120800 UTP20 -411716 sc-eQTL 2.01e-01 -0.0954 0.0744 0.357 B_Memory LOneK1K
ENSG00000120805 ARL1 -539383 sc-eQTL 8.32e-01 -0.0179 0.0845 0.357 B_Memory LOneK1K
ENSG00000136021 SCYL2 601249 sc-eQTL 5.80e-01 0.0375 0.0676 0.357 B_Memory LOneK1K
ENSG00000139351 SYCP3 -871083 sc-eQTL 3.47e-01 -0.082 0.0869 0.357 B_Memory LOneK1K
ENSG00000075089 ACTR6 669267 sc-eQTL 9.47e-01 -0.00551 0.0821 0.357 B_Naive LOneK1K
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 5.87e-01 0.0405 0.0744 0.357 B_Naive LOneK1K
ENSG00000111666 CHPT1 -828558 sc-eQTL 1.35e-01 0.0615 0.0411 0.357 B_Naive LOneK1K
ENSG00000111670 GNPTAB -962570 sc-eQTL 7.25e-01 -0.0208 0.0591 0.357 B_Naive LOneK1K
ENSG00000120800 UTP20 -411716 sc-eQTL 6.44e-01 0.0334 0.0723 0.357 B_Naive LOneK1K
ENSG00000120805 ARL1 -539383 sc-eQTL 3.50e-01 0.077 0.0823 0.357 B_Naive LOneK1K
ENSG00000136021 SCYL2 601249 sc-eQTL 6.52e-01 -0.0332 0.0734 0.357 B_Naive LOneK1K
ENSG00000139351 SYCP3 -871083 sc-eQTL 4.35e-01 0.0731 0.0934 0.357 B_Naive LOneK1K
ENSG00000075089 ACTR6 669267 sc-eQTL 5.13e-01 -0.0484 0.0738 0.357 CD14_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.66e-01 0.0253 0.0585 0.357 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 -828558 sc-eQTL 7.82e-01 0.0164 0.0592 0.357 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -962570 sc-eQTL 4.93e-01 0.0523 0.0761 0.357 CD14_Mono LOneK1K
ENSG00000120800 UTP20 -411716 sc-eQTL 3.85e-01 -0.0783 0.0899 0.357 CD14_Mono LOneK1K
ENSG00000120805 ARL1 -539383 sc-eQTL 7.45e-01 0.0251 0.077 0.357 CD14_Mono LOneK1K
ENSG00000136021 SCYL2 601249 sc-eQTL 3.83e-01 -0.0575 0.0657 0.357 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 294706 sc-eQTL 4.54e-01 0.0474 0.0631 0.357 CD14_Mono LOneK1K
ENSG00000075089 ACTR6 669267 sc-eQTL 5.65e-01 0.0497 0.0864 0.358 CD16_Mono LOneK1K
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 4.05e-01 0.0675 0.0808 0.358 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 -828558 sc-eQTL 2.14e-01 0.0907 0.0728 0.358 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -962570 sc-eQTL 1.46e-01 -0.129 0.0881 0.358 CD16_Mono LOneK1K
ENSG00000120800 UTP20 -411716 sc-eQTL 4.33e-01 -0.0668 0.085 0.358 CD16_Mono LOneK1K
ENSG00000120805 ARL1 -539383 sc-eQTL 4.85e-02 0.166 0.0838 0.358 CD16_Mono LOneK1K
ENSG00000136021 SCYL2 601249 sc-eQTL 7.09e-01 0.03 0.0801 0.358 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 294706 sc-eQTL 4.77e-01 -0.055 0.0772 0.358 CD16_Mono LOneK1K
ENSG00000075089 ACTR6 669267 sc-eQTL 6.45e-01 0.0327 0.0709 0.358 NK_CD56dim LOneK1K
ENSG00000111647 UHRF1BP1L 725515 sc-eQTL 6.71e-01 -0.0254 0.0595 0.358 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 -828558 sc-eQTL 3.50e-01 0.0732 0.0782 0.358 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -962570 sc-eQTL 2.78e-01 0.0582 0.0535 0.358 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 -411716 sc-eQTL 7.77e-01 0.0233 0.0823 0.358 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 -539383 sc-eQTL 3.04e-01 0.0786 0.0762 0.358 NK_CD56dim LOneK1K
ENSG00000136021 SCYL2 601249 sc-eQTL 5.13e-01 -0.0395 0.0602 0.358 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000214203 RPS4XP1 858551 eQTL 0.0292 0.083 0.038 0.0 0.0 0.339

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111647 \N 725515 3.1e-07 1.59e-07 6.57e-08 2.27e-07 1.07e-07 8.4e-08 2.4e-07 6.75e-08 1.86e-07 1.05e-07 1.76e-07 1.52e-07 2.38e-07 8.15e-08 6.27e-08 9.48e-08 5.73e-08 1.91e-07 7.27e-08 6.29e-08 1.23e-07 1.81e-07 1.69e-07 4.37e-08 2.17e-07 1.65e-07 1.31e-07 1.26e-07 1.37e-07 1.38e-07 1.26e-07 4.58e-08 3.8e-08 9.5e-08 5.24e-08 3.36e-08 5.26e-08 7.1e-08 5.69e-08 7.04e-08 5.04e-08 1.6e-07 3.59e-08 7.39e-09 3.48e-08 6.53e-09 7.8e-08 2.2e-09 4.97e-08