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Genes within 1Mb (chr1:53086954:C:T):

View on , UCSC , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000058799 YIPF1 -802844 eQTL 2.17e-03 0.292 0.095 0.00441 0.00102 0.00147
ENSG00000058804 NDC1 -751509 eQTL 2.83e-02 -0.489 0.223 0.00137 0.0 0.00147
ENSG00000081870 HSPB11 -858975 eQTL 1.29e-02 0.54 0.217 0.00228 0.0 0.00147
ENSG00000085840 ORC1 682531 eQTL 3.90e-02 0.404 0.195 0.00122 0.0 0.00147
ENSG00000116171 SCP2 159678 eQTL 2.45e-02 -0.452 0.201 0.0 0.0 0.00147
ENSG00000121310 ECHDC2 159742 eQTL 2.25e-02 -0.505 0.221 0.0 0.0 0.00147
ENSG00000162385 MAGOH -151564 eQTL 1.94e-02 -0.354 0.151 0.0 0.0 0.00147
ENSG00000228407 AL139156.2 926354 eQTL 7.12e-02 0.611 0.338 0.0012 0.0 0.00147
ENSG00000228929 RPS13P2 314306 eQTL 3.21e-02 0.669 0.312 0.00112 0.0 0.00147

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina