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Genes within 1Mb (chr1:51907110:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000078618 NRDC 28173 sc-eQTL 4.01e-01 0.204 0.242 0.944 B_Activated L2
ENSG00000085832 EPS15 387844 sc-eQTL 1.40e-01 -0.339 0.228 0.944 B_Activated L2
ENSG00000116157 GPX7 -695261 sc-eQTL 7.68e-01 0.0656 0.222 0.944 B_Activated L2
ENSG00000117859 OSBPL9 329931 sc-eQTL 5.66e-01 -0.137 0.239 0.944 B_Activated L2
ENSG00000117862 TXNDC12 -149061 sc-eQTL 7.84e-01 0.0625 0.228 0.944 B_Activated L2
ENSG00000123080 CDKN2C 946365 sc-eQTL 2.40e-01 0.205 0.174 0.944 B_Activated L2
ENSG00000123091 RNF11 670837 sc-eQTL 2.81e-01 -0.232 0.215 0.944 B_Activated L2
ENSG00000134717 BTF3L4 -149089 sc-eQTL 5.89e-01 0.13 0.24 0.944 B_Activated L2
ENSG00000134744 TUT4 -646377 sc-eQTL 5.62e-01 -0.129 0.223 0.944 B_Activated L2
ENSG00000134748 PRPF38A -497492 sc-eQTL 2.97e-01 -0.236 0.225 0.944 B_Activated L2
ENSG00000154222 CC2D1B -459083 sc-eQTL 2.82e-01 0.237 0.22 0.944 B_Activated L2
ENSG00000162377 COA7 -791237 sc-eQTL 4.83e-02 -0.369 0.186 0.944 B_Activated L2
ENSG00000162378 ZYG11B -819343 sc-eQTL 9.17e-01 0.0241 0.23 0.944 B_Activated L2
ENSG00000182183 SHISAL2A -726058 sc-eQTL 2.70e-02 -0.445 0.199 0.944 B_Activated L2
ENSG00000185104 FAF1 946843 sc-eQTL 2.43e-01 -0.253 0.216 0.944 B_Activated L2
ENSG00000198841 KTI12 -126700 sc-eQTL 6.29e-01 0.0935 0.193 0.944 B_Activated L2
ENSG00000078618 NRDC 28173 sc-eQTL 2.15e-01 0.259 0.208 0.95 CD8_TEM L2
ENSG00000085832 EPS15 387844 sc-eQTL 2.63e-01 0.213 0.19 0.95 CD8_TEM L2
ENSG00000116157 GPX7 -695261 sc-eQTL 1.31e-01 -0.315 0.208 0.95 CD8_TEM L2
ENSG00000117859 OSBPL9 329931 sc-eQTL 9.87e-01 0.00353 0.224 0.95 CD8_TEM L2
ENSG00000117862 TXNDC12 -149061 sc-eQTL 9.92e-01 -0.00191 0.202 0.95 CD8_TEM L2
ENSG00000123080 CDKN2C 946365 sc-eQTL 6.38e-01 0.0995 0.211 0.95 CD8_TEM L2
ENSG00000123091 RNF11 670837 sc-eQTL 8.40e-01 0.0435 0.215 0.95 CD8_TEM L2
ENSG00000134717 BTF3L4 -149089 sc-eQTL 4.12e-01 -0.179 0.218 0.95 CD8_TEM L2
ENSG00000134744 TUT4 -646377 sc-eQTL 7.08e-02 -0.361 0.199 0.95 CD8_TEM L2
ENSG00000134748 PRPF38A -497492 sc-eQTL 9.52e-02 -0.348 0.207 0.95 CD8_TEM L2
ENSG00000154222 CC2D1B -459083 sc-eQTL 4.71e-01 -0.15 0.207 0.95 CD8_TEM L2
ENSG00000157077 ZFYVE9 -234984 sc-eQTL 2.59e-01 -0.213 0.188 0.95 CD8_TEM L2
ENSG00000162378 ZYG11B -819343 sc-eQTL 8.04e-01 -0.0527 0.212 0.95 CD8_TEM L2
ENSG00000182183 SHISAL2A -726058 sc-eQTL 6.69e-01 0.0859 0.201 0.95 CD8_TEM L2
ENSG00000185104 FAF1 946843 sc-eQTL 5.16e-01 0.137 0.211 0.95 CD8_TEM L2
ENSG00000198841 KTI12 -126700 sc-eQTL 9.40e-01 -0.0157 0.209 0.95 CD8_TEM L2
ENSG00000078618 NRDC 28173 sc-eQTL 9.40e-01 0.0143 0.189 0.941 PB L2
ENSG00000085832 EPS15 387844 sc-eQTL 4.40e-01 0.209 0.269 0.941 PB L2
ENSG00000116157 GPX7 -695261 sc-eQTL 7.77e-02 -0.368 0.207 0.941 PB L2
ENSG00000117859 OSBPL9 329931 sc-eQTL 8.95e-02 -0.38 0.222 0.941 PB L2
ENSG00000117862 TXNDC12 -149061 sc-eQTL 8.18e-01 -0.0384 0.167 0.941 PB L2
ENSG00000123080 CDKN2C 946365 sc-eQTL 1.28e-01 -0.291 0.19 0.941 PB L2
ENSG00000123091 RNF11 670837 sc-eQTL 2.73e-01 -0.289 0.262 0.941 PB L2
ENSG00000134717 BTF3L4 -149089 sc-eQTL 1.74e-01 0.365 0.267 0.941 PB L2
ENSG00000134744 TUT4 -646377 sc-eQTL 3.07e-01 -0.253 0.246 0.941 PB L2
ENSG00000134748 PRPF38A -497492 sc-eQTL 9.47e-01 -0.0157 0.233 0.941 PB L2
ENSG00000154222 CC2D1B -459083 sc-eQTL 4.32e-02 -0.515 0.252 0.941 PB L2
ENSG00000162377 COA7 -791237 sc-eQTL 4.03e-01 0.2 0.239 0.941 PB L2
ENSG00000162378 ZYG11B -819343 sc-eQTL 2.63e-01 0.293 0.26 0.941 PB L2
ENSG00000182183 SHISAL2A -726058 sc-eQTL 7.69e-01 -0.0641 0.217 0.941 PB L2
ENSG00000185104 FAF1 946843 sc-eQTL 1.27e-01 0.39 0.254 0.941 PB L2
ENSG00000198841 KTI12 -126700 sc-eQTL 6.14e-02 -0.458 0.242 0.941 PB L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000078618 \N 28173 1.5e-05 1.8e-05 2.63e-06 9.4e-06 2.45e-06 6.19e-06 2.08e-05 2.99e-06 1.53e-05 7.65e-06 2.1e-05 7.38e-06 2.87e-05 7.27e-06 5.11e-06 9.61e-06 8.11e-06 1.22e-05 4.11e-06 4.21e-06 7.92e-06 1.55e-05 1.56e-05 4.71e-06 2.58e-05 5.11e-06 7.72e-06 6.87e-06 1.62e-05 1.5e-05 1.16e-05 1.01e-06 1.45e-06 4.04e-06 6.37e-06 3e-06 1.77e-06 2.39e-06 2.65e-06 2.17e-06 9.4e-07 2.44e-05 2.66e-06 1.52e-07 1.05e-06 2.49e-06 2.13e-06 8.24e-07 5.93e-07
ENSG00000116157 \N -695261 2.91e-07 1.53e-07 5.72e-08 2.09e-07 1.03e-07 9.05e-08 1.6e-07 5.53e-08 1.5e-07 6.75e-08 1.67e-07 1.08e-07 1.87e-07 8e-08 5.94e-08 7.89e-08 4.12e-08 1.44e-07 7.12e-08 4.78e-08 1.25e-07 1.25e-07 1.5e-07 2.79e-08 1.85e-07 1.26e-07 1.18e-07 1.06e-07 1.23e-07 9.49e-08 1.09e-07 3.6e-08 3.56e-08 9.3e-08 3.52e-08 2.95e-08 5.8e-08 8.93e-08 6.43e-08 4.19e-08 4.37e-08 1.5e-07 5.22e-08 1.08e-08 3.32e-08 6.39e-09 1.21e-07 1.89e-09 5e-08
ENSG00000117859 \N 329931 1.3e-06 9.39e-07 2.1e-07 4.03e-07 1.87e-07 3.32e-07 7.54e-07 2.66e-07 1.12e-06 3.85e-07 1.26e-06 5.75e-07 1.56e-06 2.67e-07 4.34e-07 6.7e-07 7.22e-07 5.31e-07 3.66e-07 2.76e-07 2.82e-07 7.73e-07 6.1e-07 3.27e-07 1.86e-06 2.55e-07 5.83e-07 4.98e-07 6.84e-07 9.3e-07 5.42e-07 4.57e-08 5.47e-08 3.51e-07 3.29e-07 2.76e-07 2.04e-07 1.21e-07 7.56e-08 8.72e-09 8.35e-08 1.43e-06 6.87e-08 5.68e-08 1.7e-07 1.12e-07 1.41e-07 5.66e-08 6.12e-08
ENSG00000154222 \N -459083 7.76e-07 5.33e-07 8.99e-08 3.43e-07 1.13e-07 1.57e-07 3.94e-07 7.79e-08 3.62e-07 2.14e-07 4.88e-07 2.55e-07 6.27e-07 1.23e-07 1.51e-07 2.05e-07 1.35e-07 3.02e-07 1.62e-07 7.54e-08 1.61e-07 2.76e-07 2.67e-07 7.94e-08 6.59e-07 2.2e-07 2.08e-07 2.01e-07 2.11e-07 2.97e-07 2.54e-07 7.49e-08 4.27e-08 1.19e-07 2.32e-07 6.33e-08 7.86e-08 5.25e-08 5.7e-08 7.53e-08 5.1e-08 4.42e-07 2.32e-08 1.11e-08 1.15e-07 1.39e-08 1.04e-07 2.8e-09 4.82e-08
ENSG00000198841 \N -126706 4.6e-06 5.24e-06 7.84e-07 2.73e-06 1.35e-06 1.35e-06 3.96e-06 1.01e-06 4.97e-06 2.53e-06 5.34e-06 3.46e-06 7.06e-06 2.03e-06 1.47e-06 3.85e-06 2.06e-06 2.9e-06 1.44e-06 9.54e-07 2.69e-06 4.72e-06 3.8e-06 1.65e-06 7.07e-06 1.43e-06 2.51e-06 1.69e-06 4.32e-06 4.15e-06 2.87e-06 5.93e-07 5.69e-07 1.79e-06 2.03e-06 8.88e-07 9.86e-07 4.91e-07 1.32e-06 3.42e-07 1.96e-07 6.63e-06 3.83e-07 1.62e-07 4.01e-07 1.02e-06 7.12e-07 2.26e-07 1.63e-07
ENSG00000232027 \N 534840 4.68e-07 2.88e-07 6.41e-08 2.53e-07 1.07e-07 1.03e-07 2.63e-07 5.84e-08 2.26e-07 1.37e-07 2.62e-07 1.62e-07 3.95e-07 9.15e-08 9.2e-08 1.26e-07 6.17e-08 2.21e-07 8.93e-08 6.16e-08 1.33e-07 2.06e-07 1.86e-07 4.15e-08 3.41e-07 1.71e-07 1.37e-07 1.52e-07 1.36e-07 1.59e-07 1.76e-07 5.22e-08 3.21e-08 9.61e-08 7.55e-08 4.77e-08 6.24e-08 7.49e-08 5.78e-08 6.43e-08 5.28e-08 2.65e-07 3.13e-08 1.84e-08 8.06e-08 1.37e-08 7.13e-08 0.0 4.97e-08