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Genes within 1Mb (chr1:29543868:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 361968 sc-eQTL 5.85e-02 0.112 0.0587 0.35 B L1
ENSG00000116353 MECR 312926 sc-eQTL 6.77e-01 -0.0294 0.0704 0.35 B L1
ENSG00000120656 TAF12 900783 sc-eQTL 4.55e-01 0.0403 0.0537 0.35 B L1
ENSG00000159023 EPB41 656777 sc-eQTL 2.24e-02 0.126 0.0549 0.35 B L1
ENSG00000162419 GMEB1 875136 sc-eQTL 6.12e-01 -0.0416 0.0818 0.35 B L1
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 9.61e-01 0.00301 0.0609 0.35 B L1
ENSG00000197989 SNHG12 960736 sc-eQTL 4.72e-01 0.0407 0.0564 0.35 B L1
ENSG00000198492 YTHDF2 807247 sc-eQTL 6.24e-01 0.0273 0.0556 0.35 B L1
ENSG00000229388 LINC01715 900640 sc-eQTL 7.26e-01 -0.0297 0.0845 0.35 B L1
ENSG00000116350 SRSF4 361968 sc-eQTL 5.88e-01 0.0303 0.0559 0.35 CD4T L1
ENSG00000116353 MECR 312926 sc-eQTL 9.89e-01 0.00108 0.0779 0.35 CD4T L1
ENSG00000120656 TAF12 900783 sc-eQTL 2.80e-01 -0.0439 0.0406 0.35 CD4T L1
ENSG00000159023 EPB41 656777 sc-eQTL 1.38e-01 0.0651 0.0437 0.35 CD4T L1
ENSG00000162419 GMEB1 875136 sc-eQTL 7.27e-01 -0.0232 0.0664 0.35 CD4T L1
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 7.79e-01 0.0179 0.0636 0.35 CD4T L1
ENSG00000197989 SNHG12 960736 sc-eQTL 1.34e-01 0.069 0.0459 0.35 CD4T L1
ENSG00000198492 YTHDF2 807247 sc-eQTL 3.04e-01 0.0506 0.0491 0.35 CD4T L1
ENSG00000229388 LINC01715 900640 sc-eQTL 9.73e-01 0.00285 0.0832 0.35 CD4T L1
ENSG00000116350 SRSF4 361968 sc-eQTL 3.43e-01 0.0585 0.0616 0.35 CD8T L1
ENSG00000116353 MECR 312926 sc-eQTL 4.42e-01 0.0637 0.0827 0.35 CD8T L1
ENSG00000120656 TAF12 900783 sc-eQTL 4.24e-01 0.041 0.0512 0.35 CD8T L1
ENSG00000159023 EPB41 656777 sc-eQTL 9.95e-01 0.000311 0.0503 0.35 CD8T L1
ENSG00000162419 GMEB1 875136 sc-eQTL 4.44e-01 -0.0591 0.0771 0.35 CD8T L1
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 8.31e-01 0.0141 0.0659 0.35 CD8T L1
ENSG00000197989 SNHG12 960736 sc-eQTL 4.26e-01 0.0445 0.0558 0.35 CD8T L1
ENSG00000198492 YTHDF2 807247 sc-eQTL 5.46e-01 0.0366 0.0607 0.35 CD8T L1
ENSG00000116350 SRSF4 361968 sc-eQTL 3.64e-01 0.0771 0.0847 0.349 DC L1
ENSG00000116353 MECR 312926 sc-eQTL 9.36e-01 -0.00759 0.0937 0.349 DC L1
ENSG00000120656 TAF12 900783 sc-eQTL 7.40e-01 -0.0277 0.0834 0.349 DC L1
ENSG00000159023 EPB41 656777 sc-eQTL 6.25e-02 -0.155 0.0827 0.349 DC L1
ENSG00000162419 GMEB1 875136 sc-eQTL 1.01e-03 -0.291 0.0873 0.349 DC L1
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 9.01e-01 -0.011 0.0885 0.349 DC L1
ENSG00000197989 SNHG12 960736 sc-eQTL 1.80e-01 0.124 0.0923 0.349 DC L1
ENSG00000198492 YTHDF2 807247 sc-eQTL 4.46e-01 -0.0509 0.0666 0.349 DC L1
ENSG00000116350 SRSF4 361968 sc-eQTL 3.24e-01 -0.0578 0.0585 0.35 Mono L1
ENSG00000116353 MECR 312926 sc-eQTL 9.47e-01 -0.00574 0.0863 0.35 Mono L1
ENSG00000120656 TAF12 900783 sc-eQTL 9.09e-01 -0.00672 0.0585 0.35 Mono L1
ENSG00000159023 EPB41 656777 sc-eQTL 5.35e-01 0.041 0.0659 0.35 Mono L1
ENSG00000162419 GMEB1 875136 sc-eQTL 8.16e-01 -0.017 0.073 0.35 Mono L1
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 7.00e-01 0.0245 0.0636 0.35 Mono L1
ENSG00000197989 SNHG12 960736 sc-eQTL 7.96e-01 0.0168 0.0651 0.35 Mono L1
ENSG00000198492 YTHDF2 807247 sc-eQTL 7.89e-01 0.0173 0.0646 0.35 Mono L1
ENSG00000116350 SRSF4 361968 sc-eQTL 7.97e-01 0.017 0.0658 0.348 NK L1
ENSG00000116353 MECR 312926 sc-eQTL 3.84e-01 0.0755 0.0865 0.348 NK L1
ENSG00000120656 TAF12 900783 sc-eQTL 9.15e-01 0.00534 0.0501 0.348 NK L1
ENSG00000159023 EPB41 656777 sc-eQTL 8.62e-01 -0.0103 0.059 0.348 NK L1
ENSG00000162419 GMEB1 875136 sc-eQTL 7.49e-01 0.0252 0.0788 0.348 NK L1
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 9.23e-02 -0.136 0.0805 0.348 NK L1
ENSG00000197989 SNHG12 960736 sc-eQTL 2.58e-01 0.0659 0.0581 0.348 NK L1
ENSG00000198492 YTHDF2 807247 sc-eQTL 9.81e-01 0.00162 0.0689 0.348 NK L1
ENSG00000116350 SRSF4 361968 sc-eQTL 6.01e-02 0.119 0.0629 0.35 Other_T L1
ENSG00000116353 MECR 312926 sc-eQTL 4.19e-01 -0.0608 0.075 0.35 Other_T L1
ENSG00000120656 TAF12 900783 sc-eQTL 7.37e-02 0.122 0.0679 0.35 Other_T L1
ENSG00000159023 EPB41 656777 sc-eQTL 8.05e-01 0.0168 0.0682 0.35 Other_T L1
ENSG00000162419 GMEB1 875136 sc-eQTL 3.01e-01 0.0884 0.0854 0.35 Other_T L1
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 6.93e-02 0.122 0.067 0.35 Other_T L1
ENSG00000197989 SNHG12 960736 sc-eQTL 3.18e-01 0.0653 0.0653 0.35 Other_T L1
ENSG00000198492 YTHDF2 807247 sc-eQTL 1.02e-01 0.11 0.0673 0.35 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 361968 sc-eQTL 9.51e-02 0.173 0.103 0.36 B_Activated L2
ENSG00000116353 MECR 312926 sc-eQTL 5.79e-01 -0.0518 0.0933 0.36 B_Activated L2
ENSG00000120656 TAF12 900783 sc-eQTL 2.88e-01 -0.101 0.0952 0.36 B_Activated L2
ENSG00000159023 EPB41 656777 sc-eQTL 4.84e-01 -0.0647 0.0922 0.36 B_Activated L2
ENSG00000162419 GMEB1 875136 sc-eQTL 4.88e-01 -0.0697 0.1 0.36 B_Activated L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 5.01e-01 -0.0683 0.101 0.36 B_Activated L2
ENSG00000197989 SNHG12 960736 sc-eQTL 8.78e-01 0.0156 0.101 0.36 B_Activated L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 7.08e-01 -0.0394 0.105 0.36 B_Activated L2
ENSG00000229388 LINC01715 900640 sc-eQTL 8.09e-01 -0.0195 0.0808 0.36 B_Activated L2
ENSG00000116350 SRSF4 361968 sc-eQTL 9.17e-01 0.00807 0.0777 0.352 B_Intermediate L2
ENSG00000116353 MECR 312926 sc-eQTL 3.59e-02 -0.189 0.0896 0.352 B_Intermediate L2
ENSG00000120656 TAF12 900783 sc-eQTL 7.58e-01 0.0245 0.0792 0.352 B_Intermediate L2
ENSG00000159023 EPB41 656777 sc-eQTL 6.97e-02 0.129 0.0709 0.352 B_Intermediate L2
ENSG00000162419 GMEB1 875136 sc-eQTL 1.03e-01 0.155 0.0945 0.352 B_Intermediate L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 3.23e-01 0.089 0.0898 0.352 B_Intermediate L2
ENSG00000197989 SNHG12 960736 sc-eQTL 9.27e-01 0.00626 0.0685 0.352 B_Intermediate L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 5.15e-01 0.0517 0.0792 0.352 B_Intermediate L2
ENSG00000229388 LINC01715 900640 sc-eQTL 5.77e-01 0.0488 0.0873 0.352 B_Intermediate L2
ENSG00000116350 SRSF4 361968 sc-eQTL 5.71e-01 -0.046 0.0809 0.351 B_Memory L2
ENSG00000116353 MECR 312926 sc-eQTL 4.97e-01 0.0621 0.0913 0.351 B_Memory L2
ENSG00000120656 TAF12 900783 sc-eQTL 2.61e-01 0.0955 0.0846 0.351 B_Memory L2
ENSG00000159023 EPB41 656777 sc-eQTL 1.99e-01 0.0992 0.077 0.351 B_Memory L2
ENSG00000162419 GMEB1 875136 sc-eQTL 9.52e-01 -0.0053 0.088 0.351 B_Memory L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 1.98e-01 0.111 0.086 0.351 B_Memory L2
ENSG00000197989 SNHG12 960736 sc-eQTL 7.34e-01 -0.0273 0.0803 0.351 B_Memory L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 5.63e-01 0.0504 0.0871 0.351 B_Memory L2
ENSG00000229388 LINC01715 900640 sc-eQTL 8.33e-01 0.0178 0.0844 0.351 B_Memory L2
ENSG00000116350 SRSF4 361968 sc-eQTL 4.91e-01 0.0471 0.0684 0.35 B_Naive1 L2
ENSG00000116353 MECR 312926 sc-eQTL 3.55e-01 -0.0833 0.0898 0.35 B_Naive1 L2
ENSG00000120656 TAF12 900783 sc-eQTL 2.78e-01 0.0795 0.0731 0.35 B_Naive1 L2
ENSG00000159023 EPB41 656777 sc-eQTL 2.11e-01 0.0802 0.064 0.35 B_Naive1 L2
ENSG00000162419 GMEB1 875136 sc-eQTL 4.85e-01 -0.0581 0.0832 0.35 B_Naive1 L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 2.10e-01 0.104 0.0824 0.35 B_Naive1 L2
ENSG00000197989 SNHG12 960736 sc-eQTL 5.33e-01 0.0387 0.062 0.35 B_Naive1 L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 6.88e-01 0.0306 0.0761 0.35 B_Naive1 L2
ENSG00000229388 LINC01715 900640 sc-eQTL 4.45e-01 -0.0686 0.0896 0.35 B_Naive1 L2
ENSG00000116350 SRSF4 361968 sc-eQTL 1.91e-01 0.101 0.077 0.35 B_Naive2 L2
ENSG00000116353 MECR 312926 sc-eQTL 5.51e-01 0.0537 0.09 0.35 B_Naive2 L2
ENSG00000120656 TAF12 900783 sc-eQTL 8.47e-01 0.0165 0.085 0.35 B_Naive2 L2
ENSG00000159023 EPB41 656777 sc-eQTL 2.59e-01 0.0892 0.0788 0.35 B_Naive2 L2
ENSG00000162419 GMEB1 875136 sc-eQTL 3.68e-01 0.0832 0.0923 0.35 B_Naive2 L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 2.61e-01 -0.09 0.0798 0.35 B_Naive2 L2
ENSG00000197989 SNHG12 960736 sc-eQTL 9.88e-01 0.00136 0.0892 0.35 B_Naive2 L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 1.02e-01 0.142 0.0865 0.35 B_Naive2 L2
ENSG00000229388 LINC01715 900640 sc-eQTL 5.94e-01 -0.048 0.09 0.35 B_Naive2 L2
ENSG00000116350 SRSF4 361968 sc-eQTL 1.56e-01 0.126 0.0883 0.345 CD4_CTL L2
ENSG00000116353 MECR 312926 sc-eQTL 2.28e-01 0.108 0.0897 0.345 CD4_CTL L2
ENSG00000120656 TAF12 900783 sc-eQTL 5.02e-01 -0.061 0.0907 0.345 CD4_CTL L2
ENSG00000159023 EPB41 656777 sc-eQTL 4.00e-01 -0.0754 0.0894 0.345 CD4_CTL L2
ENSG00000162419 GMEB1 875136 sc-eQTL 6.41e-01 -0.0444 0.0949 0.345 CD4_CTL L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 9.15e-01 0.00987 0.0921 0.345 CD4_CTL L2
ENSG00000197989 SNHG12 960736 sc-eQTL 3.02e-02 0.193 0.0884 0.345 CD4_CTL L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 2.46e-01 -0.0958 0.0824 0.345 CD4_CTL L2
ENSG00000229388 LINC01715 900640 sc-eQTL 2.74e-01 0.0817 0.0744 0.345 CD4_CTL L2
ENSG00000116350 SRSF4 361968 sc-eQTL 3.45e-01 0.0542 0.0573 0.35 CD4_Naive L2
ENSG00000116353 MECR 312926 sc-eQTL 8.36e-01 0.0171 0.0826 0.35 CD4_Naive L2
ENSG00000120656 TAF12 900783 sc-eQTL 3.80e-01 -0.0421 0.0479 0.35 CD4_Naive L2
ENSG00000159023 EPB41 656777 sc-eQTL 1.13e-01 0.0693 0.0435 0.35 CD4_Naive L2
ENSG00000162419 GMEB1 875136 sc-eQTL 8.10e-01 -0.0175 0.0728 0.35 CD4_Naive L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 9.16e-01 0.00775 0.0735 0.35 CD4_Naive L2
ENSG00000197989 SNHG12 960736 sc-eQTL 3.82e-01 0.041 0.0469 0.35 CD4_Naive L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 3.70e-01 0.0452 0.0504 0.35 CD4_Naive L2
ENSG00000229388 LINC01715 900640 sc-eQTL 7.15e-01 -0.0321 0.0877 0.35 CD4_Naive L2
ENSG00000116350 SRSF4 361968 sc-eQTL 5.04e-01 0.0454 0.0679 0.35 CD4_TCM L2
ENSG00000116353 MECR 312926 sc-eQTL 4.58e-01 0.068 0.0914 0.35 CD4_TCM L2
ENSG00000120656 TAF12 900783 sc-eQTL 9.11e-01 0.00602 0.054 0.35 CD4_TCM L2
ENSG00000159023 EPB41 656777 sc-eQTL 3.87e-02 0.106 0.0509 0.35 CD4_TCM L2
ENSG00000162419 GMEB1 875136 sc-eQTL 6.61e-01 -0.0344 0.0784 0.35 CD4_TCM L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 1.85e-01 0.106 0.0794 0.35 CD4_TCM L2
ENSG00000197989 SNHG12 960736 sc-eQTL 5.57e-01 0.0334 0.0569 0.35 CD4_TCM L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 8.79e-01 0.0102 0.0672 0.35 CD4_TCM L2
ENSG00000229388 LINC01715 900640 sc-eQTL 3.95e-01 0.0787 0.0923 0.35 CD4_TCM L2
ENSG00000116350 SRSF4 361968 sc-eQTL 8.69e-01 0.0139 0.0842 0.35 CD4_TEM L2
ENSG00000116353 MECR 312926 sc-eQTL 9.79e-01 -0.00239 0.0928 0.35 CD4_TEM L2
ENSG00000120656 TAF12 900783 sc-eQTL 7.65e-01 -0.0226 0.0754 0.35 CD4_TEM L2
ENSG00000159023 EPB41 656777 sc-eQTL 8.68e-01 -0.0116 0.0693 0.35 CD4_TEM L2
ENSG00000162419 GMEB1 875136 sc-eQTL 6.97e-01 -0.0347 0.089 0.35 CD4_TEM L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 3.35e-01 0.0884 0.0915 0.35 CD4_TEM L2
ENSG00000197989 SNHG12 960736 sc-eQTL 2.26e-01 -0.0836 0.0689 0.35 CD4_TEM L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 5.46e-01 -0.0487 0.0804 0.35 CD4_TEM L2
ENSG00000229388 LINC01715 900640 sc-eQTL 7.09e-01 0.0315 0.0844 0.35 CD4_TEM L2
ENSG00000116350 SRSF4 361968 sc-eQTL 5.68e-01 0.0434 0.0759 0.35 CD8_CTL L2
ENSG00000116353 MECR 312926 sc-eQTL 4.59e-01 -0.0662 0.0894 0.35 CD8_CTL L2
ENSG00000120656 TAF12 900783 sc-eQTL 6.26e-01 0.0356 0.0728 0.35 CD8_CTL L2
ENSG00000159023 EPB41 656777 sc-eQTL 2.92e-01 0.0717 0.0679 0.35 CD8_CTL L2
ENSG00000162419 GMEB1 875136 sc-eQTL 4.85e-01 -0.0593 0.0848 0.35 CD8_CTL L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 1.47e-01 0.12 0.0825 0.35 CD8_CTL L2
ENSG00000197989 SNHG12 960736 sc-eQTL 2.72e-01 0.0853 0.0775 0.35 CD8_CTL L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 4.30e-01 0.0633 0.08 0.35 CD8_CTL L2
ENSG00000116350 SRSF4 361968 sc-eQTL 1.63e-01 -0.107 0.0762 0.35 CD8_Naive L2
ENSG00000116353 MECR 312926 sc-eQTL 4.97e-02 0.165 0.0834 0.35 CD8_Naive L2
ENSG00000120656 TAF12 900783 sc-eQTL 6.63e-02 0.114 0.0619 0.35 CD8_Naive L2
ENSG00000159023 EPB41 656777 sc-eQTL 6.05e-01 0.03 0.0578 0.35 CD8_Naive L2
ENSG00000162419 GMEB1 875136 sc-eQTL 8.90e-01 0.0118 0.0851 0.35 CD8_Naive L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 9.66e-01 0.00369 0.0855 0.35 CD8_Naive L2
ENSG00000197989 SNHG12 960736 sc-eQTL 6.49e-01 0.0275 0.0602 0.35 CD8_Naive L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 6.46e-01 0.0286 0.0622 0.35 CD8_Naive L2
ENSG00000116350 SRSF4 361968 sc-eQTL 5.65e-01 -0.0534 0.0926 0.35 CD8_TCM L2
ENSG00000116353 MECR 312926 sc-eQTL 5.47e-01 0.0554 0.0919 0.35 CD8_TCM L2
ENSG00000120656 TAF12 900783 sc-eQTL 7.79e-01 -0.0227 0.0809 0.35 CD8_TCM L2
ENSG00000159023 EPB41 656777 sc-eQTL 7.05e-02 0.125 0.069 0.35 CD8_TCM L2
ENSG00000162419 GMEB1 875136 sc-eQTL 9.12e-01 -0.0104 0.0943 0.35 CD8_TCM L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 3.90e-01 0.0829 0.0962 0.35 CD8_TCM L2
ENSG00000197989 SNHG12 960736 sc-eQTL 3.27e-02 0.171 0.0796 0.35 CD8_TCM L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 3.10e-01 -0.0875 0.086 0.35 CD8_TCM L2
ENSG00000116350 SRSF4 361968 sc-eQTL 5.62e-01 0.0514 0.0886 0.354 CD8_TEM L2
ENSG00000116353 MECR 312926 sc-eQTL 7.65e-01 0.028 0.0935 0.354 CD8_TEM L2
ENSG00000120656 TAF12 900783 sc-eQTL 3.99e-02 -0.18 0.0868 0.354 CD8_TEM L2
ENSG00000159023 EPB41 656777 sc-eQTL 8.91e-01 -0.0128 0.0934 0.354 CD8_TEM L2
ENSG00000162419 GMEB1 875136 sc-eQTL 6.81e-01 -0.0397 0.0967 0.354 CD8_TEM L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 6.99e-01 -0.0366 0.0945 0.354 CD8_TEM L2
ENSG00000197989 SNHG12 960736 sc-eQTL 5.02e-01 0.0559 0.0831 0.354 CD8_TEM L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 5.14e-01 -0.0613 0.0938 0.354 CD8_TEM L2
ENSG00000116350 SRSF4 361968 sc-eQTL 9.69e-02 0.138 0.083 0.351 MAIT L2
ENSG00000116353 MECR 312926 sc-eQTL 1.42e-01 -0.137 0.0933 0.351 MAIT L2
ENSG00000120656 TAF12 900783 sc-eQTL 4.06e-02 0.16 0.0777 0.351 MAIT L2
ENSG00000159023 EPB41 656777 sc-eQTL 9.74e-02 0.131 0.0785 0.351 MAIT L2
ENSG00000162419 GMEB1 875136 sc-eQTL 2.12e-01 0.116 0.0927 0.351 MAIT L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 4.19e-01 0.0748 0.0923 0.351 MAIT L2
ENSG00000197989 SNHG12 960736 sc-eQTL 7.81e-02 0.157 0.0885 0.351 MAIT L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 1.21e-01 0.13 0.0837 0.351 MAIT L2
ENSG00000116350 SRSF4 361968 sc-eQTL 6.20e-01 0.0461 0.0928 0.344 NK_CD56bright L2
ENSG00000116353 MECR 312926 sc-eQTL 4.90e-01 0.0637 0.0921 0.344 NK_CD56bright L2
ENSG00000120656 TAF12 900783 sc-eQTL 3.73e-01 0.0774 0.0867 0.344 NK_CD56bright L2
ENSG00000159023 EPB41 656777 sc-eQTL 5.02e-01 -0.0546 0.0812 0.344 NK_CD56bright L2
ENSG00000162419 GMEB1 875136 sc-eQTL 4.47e-01 0.0729 0.0956 0.344 NK_CD56bright L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 8.28e-01 0.0204 0.0939 0.344 NK_CD56bright L2
ENSG00000197989 SNHG12 960736 sc-eQTL 4.99e-01 0.0579 0.0854 0.344 NK_CD56bright L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 4.50e-01 -0.07 0.0925 0.344 NK_CD56bright L2
ENSG00000116350 SRSF4 361968 sc-eQTL 3.63e-01 -0.0614 0.0674 0.347 NK_CD56dim L2
ENSG00000116353 MECR 312926 sc-eQTL 2.57e-02 0.204 0.0908 0.347 NK_CD56dim L2
ENSG00000120656 TAF12 900783 sc-eQTL 9.55e-01 0.00354 0.0632 0.347 NK_CD56dim L2
ENSG00000159023 EPB41 656777 sc-eQTL 7.65e-01 0.0192 0.0641 0.347 NK_CD56dim L2
ENSG00000162419 GMEB1 875136 sc-eQTL 4.89e-01 -0.0616 0.0889 0.347 NK_CD56dim L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 1.86e-01 -0.117 0.088 0.347 NK_CD56dim L2
ENSG00000197989 SNHG12 960736 sc-eQTL 2.66e-01 0.0793 0.071 0.347 NK_CD56dim L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 1.88e-01 0.104 0.0784 0.347 NK_CD56dim L2
ENSG00000116350 SRSF4 361968 sc-eQTL 1.34e-01 -0.135 0.0899 0.34 NK_HLA L2
ENSG00000116353 MECR 312926 sc-eQTL 1.06e-01 -0.146 0.0901 0.34 NK_HLA L2
ENSG00000120656 TAF12 900783 sc-eQTL 8.61e-01 -0.0164 0.0931 0.34 NK_HLA L2
ENSG00000159023 EPB41 656777 sc-eQTL 7.04e-01 -0.0324 0.0851 0.34 NK_HLA L2
ENSG00000162419 GMEB1 875136 sc-eQTL 6.12e-01 0.0498 0.098 0.34 NK_HLA L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 1.75e-01 -0.134 0.0988 0.34 NK_HLA L2
ENSG00000197989 SNHG12 960736 sc-eQTL 5.86e-01 0.0492 0.0903 0.34 NK_HLA L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 4.39e-01 0.0738 0.0951 0.34 NK_HLA L2
ENSG00000116350 SRSF4 361968 sc-eQTL 4.70e-01 0.0546 0.0754 0.347 NK_cytokine L2
ENSG00000116353 MECR 312926 sc-eQTL 1.52e-01 -0.134 0.0931 0.347 NK_cytokine L2
ENSG00000120656 TAF12 900783 sc-eQTL 6.20e-01 0.0355 0.0716 0.347 NK_cytokine L2
ENSG00000159023 EPB41 656777 sc-eQTL 8.12e-01 0.0172 0.0723 0.347 NK_cytokine L2
ENSG00000162419 GMEB1 875136 sc-eQTL 1.65e-01 0.122 0.0874 0.347 NK_cytokine L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 1.61e-01 -0.121 0.0858 0.347 NK_cytokine L2
ENSG00000197989 SNHG12 960736 sc-eQTL 1.39e-01 0.101 0.0679 0.347 NK_cytokine L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 1.11e-01 -0.132 0.0823 0.347 NK_cytokine L2
ENSG00000116350 SRSF4 361968 sc-eQTL 3.72e-01 0.0968 0.108 0.333 PB L2
ENSG00000116353 MECR 312926 sc-eQTL 6.12e-01 -0.0496 0.0975 0.333 PB L2
ENSG00000120656 TAF12 900783 sc-eQTL 5.31e-01 -0.0573 0.0912 0.333 PB L2
ENSG00000159023 EPB41 656777 sc-eQTL 8.44e-01 -0.0216 0.11 0.333 PB L2
ENSG00000162419 GMEB1 875136 sc-eQTL 8.86e-01 -0.0161 0.112 0.333 PB L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 5.21e-01 0.0679 0.106 0.333 PB L2
ENSG00000197989 SNHG12 960736 sc-eQTL 8.76e-01 -0.0176 0.113 0.333 PB L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 5.38e-01 -0.0574 0.0928 0.333 PB L2
ENSG00000229388 LINC01715 900640 sc-eQTL 1.22e-01 0.164 0.105 0.333 PB L2
ENSG00000116350 SRSF4 361968 sc-eQTL 8.40e-01 0.0153 0.0759 0.354 Pro_T L2
ENSG00000116353 MECR 312926 sc-eQTL 9.34e-01 -0.00648 0.0776 0.354 Pro_T L2
ENSG00000120656 TAF12 900783 sc-eQTL 2.83e-01 0.0914 0.0849 0.354 Pro_T L2
ENSG00000159023 EPB41 656777 sc-eQTL 6.07e-01 0.0407 0.079 0.354 Pro_T L2
ENSG00000162419 GMEB1 875136 sc-eQTL 6.09e-01 -0.0479 0.0937 0.354 Pro_T L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 1.58e-02 0.193 0.0792 0.354 Pro_T L2
ENSG00000197989 SNHG12 960736 sc-eQTL 4.46e-01 0.063 0.0826 0.354 Pro_T L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 5.71e-01 0.0443 0.0781 0.354 Pro_T L2
ENSG00000116350 SRSF4 361968 sc-eQTL 9.74e-01 0.00262 0.0802 0.35 Treg L2
ENSG00000116353 MECR 312926 sc-eQTL 4.76e-01 -0.0689 0.0965 0.35 Treg L2
ENSG00000120656 TAF12 900783 sc-eQTL 7.12e-02 -0.143 0.0789 0.35 Treg L2
ENSG00000159023 EPB41 656777 sc-eQTL 6.08e-01 -0.0346 0.0673 0.35 Treg L2
ENSG00000162419 GMEB1 875136 sc-eQTL 8.21e-01 0.0202 0.0892 0.35 Treg L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 6.53e-01 0.0418 0.0927 0.35 Treg L2
ENSG00000197989 SNHG12 960736 sc-eQTL 4.32e-03 0.188 0.0651 0.35 Treg L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 9.79e-01 -0.00231 0.0895 0.35 Treg L2
ENSG00000229388 LINC01715 900640 sc-eQTL 3.15e-01 0.0881 0.0875 0.35 Treg L2
ENSG00000116350 SRSF4 361968 sc-eQTL 7.08e-01 0.0333 0.0888 0.351 cDC L2
ENSG00000116353 MECR 312926 sc-eQTL 1.76e-01 0.135 0.0993 0.351 cDC L2
ENSG00000120656 TAF12 900783 sc-eQTL 7.70e-01 0.0268 0.0918 0.351 cDC L2
ENSG00000159023 EPB41 656777 sc-eQTL 1.75e-01 -0.114 0.0836 0.351 cDC L2
ENSG00000162419 GMEB1 875136 sc-eQTL 6.54e-03 -0.268 0.0974 0.351 cDC L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 3.23e-01 -0.0972 0.0981 0.351 cDC L2
ENSG00000197989 SNHG12 960736 sc-eQTL 6.24e-01 0.0446 0.091 0.351 cDC L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 8.81e-01 0.0128 0.0851 0.351 cDC L2
ENSG00000116350 SRSF4 361968 sc-eQTL 2.35e-01 -0.0849 0.0714 0.35 cMono_IL1B L2
ENSG00000116353 MECR 312926 sc-eQTL 2.05e-01 0.112 0.0882 0.35 cMono_IL1B L2
ENSG00000120656 TAF12 900783 sc-eQTL 2.36e-01 -0.08 0.0673 0.35 cMono_IL1B L2
ENSG00000159023 EPB41 656777 sc-eQTL 3.81e-01 0.0567 0.0646 0.35 cMono_IL1B L2
ENSG00000162419 GMEB1 875136 sc-eQTL 7.58e-01 -0.0243 0.0788 0.35 cMono_IL1B L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 4.84e-01 0.0486 0.0692 0.35 cMono_IL1B L2
ENSG00000197989 SNHG12 960736 sc-eQTL 2.48e-01 0.082 0.0708 0.35 cMono_IL1B L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 8.94e-01 -0.00895 0.0672 0.35 cMono_IL1B L2
ENSG00000116350 SRSF4 361968 sc-eQTL 1.98e-01 -0.0877 0.068 0.35 cMono_S100A L2
ENSG00000116353 MECR 312926 sc-eQTL 5.13e-01 -0.0588 0.0899 0.35 cMono_S100A L2
ENSG00000120656 TAF12 900783 sc-eQTL 4.47e-01 0.0651 0.0854 0.35 cMono_S100A L2
ENSG00000159023 EPB41 656777 sc-eQTL 6.94e-01 -0.0325 0.0825 0.35 cMono_S100A L2
ENSG00000162419 GMEB1 875136 sc-eQTL 5.70e-01 -0.0494 0.0868 0.35 cMono_S100A L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 6.02e-01 -0.0437 0.0835 0.35 cMono_S100A L2
ENSG00000197989 SNHG12 960736 sc-eQTL 7.83e-01 -0.0233 0.0844 0.35 cMono_S100A L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 8.85e-01 0.0133 0.0917 0.35 cMono_S100A L2
ENSG00000116350 SRSF4 361968 sc-eQTL 5.87e-02 0.223 0.117 0.361 gdT L2
ENSG00000116353 MECR 312926 sc-eQTL 7.74e-01 0.0339 0.118 0.361 gdT L2
ENSG00000120656 TAF12 900783 sc-eQTL 7.24e-01 -0.0397 0.112 0.361 gdT L2
ENSG00000159023 EPB41 656777 sc-eQTL 6.73e-01 0.0438 0.104 0.361 gdT L2
ENSG00000162419 GMEB1 875136 sc-eQTL 1.65e-01 0.155 0.111 0.361 gdT L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 7.85e-01 0.0292 0.107 0.361 gdT L2
ENSG00000197989 SNHG12 960736 sc-eQTL 1.20e-01 -0.162 0.104 0.361 gdT L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 9.66e-01 -0.00502 0.116 0.361 gdT L2
ENSG00000116350 SRSF4 361968 sc-eQTL 8.85e-01 0.0123 0.0849 0.349 intMono L2
ENSG00000116353 MECR 312926 sc-eQTL 7.20e-01 -0.0324 0.0901 0.349 intMono L2
ENSG00000120656 TAF12 900783 sc-eQTL 4.59e-01 0.0598 0.0806 0.349 intMono L2
ENSG00000159023 EPB41 656777 sc-eQTL 3.79e-01 0.0772 0.0876 0.349 intMono L2
ENSG00000162419 GMEB1 875136 sc-eQTL 4.83e-01 -0.0632 0.09 0.349 intMono L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 1.72e-02 0.215 0.0896 0.349 intMono L2
ENSG00000197989 SNHG12 960736 sc-eQTL 2.36e-01 0.104 0.0879 0.349 intMono L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 1.30e-01 0.143 0.0937 0.349 intMono L2
ENSG00000116350 SRSF4 361968 sc-eQTL 7.71e-01 -0.0254 0.087 0.351 ncMono L2
ENSG00000116353 MECR 312926 sc-eQTL 9.29e-01 -0.00841 0.0938 0.351 ncMono L2
ENSG00000120656 TAF12 900783 sc-eQTL 4.65e-01 -0.0633 0.0866 0.351 ncMono L2
ENSG00000159023 EPB41 656777 sc-eQTL 5.99e-01 -0.0494 0.094 0.351 ncMono L2
ENSG00000162419 GMEB1 875136 sc-eQTL 8.37e-01 -0.0198 0.0962 0.351 ncMono L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 2.59e-01 0.101 0.0895 0.351 ncMono L2
ENSG00000197989 SNHG12 960736 sc-eQTL 7.84e-01 -0.0216 0.0788 0.351 ncMono L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 3.32e-01 -0.0864 0.0888 0.351 ncMono L2
ENSG00000116350 SRSF4 361968 sc-eQTL 8.24e-01 0.0232 0.104 0.333 pDC L2
ENSG00000116353 MECR 312926 sc-eQTL 8.75e-02 -0.183 0.106 0.333 pDC L2
ENSG00000120656 TAF12 900783 sc-eQTL 9.18e-02 0.175 0.103 0.333 pDC L2
ENSG00000159023 EPB41 656777 sc-eQTL 6.59e-01 -0.0452 0.102 0.333 pDC L2
ENSG00000162419 GMEB1 875136 sc-eQTL 1.85e-01 -0.141 0.106 0.333 pDC L2
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 9.99e-01 7.91e-05 0.0996 0.333 pDC L2
ENSG00000197989 SNHG12 960736 sc-eQTL 2.10e-01 0.124 0.0982 0.333 pDC L2
ENSG00000198492 YTHDF2 807247 sc-eQTL 7.01e-01 -0.0313 0.0814 0.333 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 361968 sc-eQTL 8.53e-01 0.0133 0.0716 0.35 B_Memory LOneK1K
ENSG00000116353 MECR 312926 sc-eQTL 1.66e-01 -0.122 0.088 0.35 B_Memory LOneK1K
ENSG00000120656 TAF12 900783 sc-eQTL 7.43e-01 0.0233 0.071 0.35 B_Memory LOneK1K
ENSG00000159023 EPB41 656777 sc-eQTL 7.45e-02 0.113 0.0629 0.35 B_Memory LOneK1K
ENSG00000162419 GMEB1 875136 sc-eQTL 5.10e-01 0.056 0.0848 0.35 B_Memory LOneK1K
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 1.61e-01 0.111 0.0793 0.35 B_Memory LOneK1K
ENSG00000197989 SNHG12 960736 sc-eQTL 8.91e-01 0.00846 0.0618 0.35 B_Memory LOneK1K
ENSG00000198492 YTHDF2 807247 sc-eQTL 5.86e-01 0.0403 0.074 0.35 B_Memory LOneK1K
ENSG00000229388 LINC01715 900640 sc-eQTL 3.14e-01 0.089 0.0881 0.35 B_Memory LOneK1K
ENSG00000116350 SRSF4 361968 sc-eQTL 7.70e-02 0.114 0.0641 0.35 B_Naive LOneK1K
ENSG00000116353 MECR 312926 sc-eQTL 7.24e-01 -0.0298 0.0841 0.35 B_Naive LOneK1K
ENSG00000120656 TAF12 900783 sc-eQTL 5.51e-01 0.0414 0.0693 0.35 B_Naive LOneK1K
ENSG00000159023 EPB41 656777 sc-eQTL 2.41e-01 0.0723 0.0615 0.35 B_Naive LOneK1K
ENSG00000162419 GMEB1 875136 sc-eQTL 8.21e-01 -0.0196 0.0869 0.35 B_Naive LOneK1K
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 8.70e-01 0.0122 0.0746 0.35 B_Naive LOneK1K
ENSG00000197989 SNHG12 960736 sc-eQTL 8.57e-01 0.0111 0.0616 0.35 B_Naive LOneK1K
ENSG00000198492 YTHDF2 807247 sc-eQTL 3.43e-01 0.0689 0.0725 0.35 B_Naive LOneK1K
ENSG00000229388 LINC01715 900640 sc-eQTL 3.90e-01 -0.0776 0.09 0.35 B_Naive LOneK1K
ENSG00000116350 SRSF4 361968 sc-eQTL 2.13e-01 -0.079 0.0633 0.35 CD14_Mono LOneK1K
ENSG00000116353 MECR 312926 sc-eQTL 6.01e-01 0.0445 0.0849 0.35 CD14_Mono LOneK1K
ENSG00000120656 TAF12 900783 sc-eQTL 8.63e-01 -0.011 0.0635 0.35 CD14_Mono LOneK1K
ENSG00000159023 EPB41 656777 sc-eQTL 6.74e-01 0.0265 0.063 0.35 CD14_Mono LOneK1K
ENSG00000162419 GMEB1 875136 sc-eQTL 3.98e-01 -0.0608 0.0718 0.35 CD14_Mono LOneK1K
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 9.77e-01 -0.00184 0.0651 0.35 CD14_Mono LOneK1K
ENSG00000197989 SNHG12 960736 sc-eQTL 6.07e-01 0.0358 0.0696 0.35 CD14_Mono LOneK1K
ENSG00000198492 YTHDF2 807247 sc-eQTL 8.70e-01 0.0111 0.0675 0.35 CD14_Mono LOneK1K
ENSG00000116350 SRSF4 361968 sc-eQTL 8.05e-01 -0.0189 0.0764 0.349 CD16_Mono LOneK1K
ENSG00000116353 MECR 312926 sc-eQTL 8.76e-01 -0.0136 0.0871 0.349 CD16_Mono LOneK1K
ENSG00000120656 TAF12 900783 sc-eQTL 7.20e-01 0.0276 0.0768 0.349 CD16_Mono LOneK1K
ENSG00000159023 EPB41 656777 sc-eQTL 9.75e-01 0.00273 0.0883 0.349 CD16_Mono LOneK1K
ENSG00000162419 GMEB1 875136 sc-eQTL 4.48e-01 -0.0658 0.0865 0.349 CD16_Mono LOneK1K
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 9.55e-02 0.149 0.0891 0.349 CD16_Mono LOneK1K
ENSG00000197989 SNHG12 960736 sc-eQTL 7.02e-01 0.0316 0.0825 0.349 CD16_Mono LOneK1K
ENSG00000198492 YTHDF2 807247 sc-eQTL 7.94e-01 -0.0234 0.0892 0.349 CD16_Mono LOneK1K
ENSG00000116350 SRSF4 361968 sc-eQTL 7.42e-01 -0.0212 0.0643 0.347 NK_CD56dim LOneK1K
ENSG00000116353 MECR 312926 sc-eQTL 6.69e-01 0.038 0.0887 0.347 NK_CD56dim LOneK1K
ENSG00000120656 TAF12 900783 sc-eQTL 9.82e-01 0.00119 0.0518 0.347 NK_CD56dim LOneK1K
ENSG00000159023 EPB41 656777 sc-eQTL 8.35e-01 0.0126 0.0604 0.347 NK_CD56dim LOneK1K
ENSG00000162419 GMEB1 875136 sc-eQTL 7.99e-01 0.021 0.0822 0.347 NK_CD56dim LOneK1K
ENSG00000180098 TRNAU1AP 990783 sc-eQTL 4.24e-02 -0.166 0.0814 0.347 NK_CD56dim LOneK1K
ENSG00000197989 SNHG12 960736 sc-eQTL 2.77e-01 0.067 0.0614 0.347 NK_CD56dim LOneK1K
ENSG00000198492 YTHDF2 807247 sc-eQTL 7.07e-01 0.026 0.0691 0.347 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116350 SRSF4 361968 eQTL 0.00306 0.0323 0.0109 0.0 0.0 0.319
ENSG00000116353 MECR 312926 eQTL 0.0145 0.0488 0.0199 0.00172 0.0 0.319
ENSG00000198492 YTHDF2 807247 eQTL 0.0339 -0.0271 0.0128 0.0019 0.0 0.319
ENSG00000233427 AL009181.1 666532 eQTL 0.0486 0.0762 0.0386 0.0 0.0 0.319
ENSG00000270103 AL360012.1 895268 eQTL 0.00578 0.119 0.0431 0.0 0.00203 0.319
ENSG00000274978 RNU11 895268 eQTL 0.00108 -0.111 0.0339 0.0 0.0101 0.319

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162419 \N 875136 2.76e-07 1.27e-07 5.03e-08 1.81e-07 1.01e-07 9.91e-08 1.6e-07 5.66e-08 1.47e-07 6.08e-08 1.57e-07 1.08e-07 1.59e-07 7.37e-08 6.25e-08 7.23e-08 4.12e-08 1.4e-07 6.07e-08 4.3e-08 1.26e-07 1.25e-07 1.44e-07 2.91e-08 1.63e-07 1.22e-07 1.13e-07 9.92e-08 1.23e-07 1.05e-07 1.02e-07 3.1e-08 4.02e-08 8.72e-08 5.64e-08 3.28e-08 5.29e-08 8.63e-08 6.86e-08 4.19e-08 5.24e-08 1.46e-07 5.2e-08 1.32e-08 4.67e-08 1.86e-08 1.2e-07 1.88e-09 5.04e-08