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Genes within 1Mb (chr6:139902218:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000112406 HECA 767138 sc-eQTL 3.00e-01 -0.233 0.224 0.051 B_Activated L2
ENSG00000135597 REPS1 913957 sc-eQTL 3.76e-01 0.208 0.234 0.051 B_Activated L2
ENSG00000146386 ABRACL 873473 sc-eQTL 7.48e-02 0.377 0.211 0.051 B_Activated L2
ENSG00000164440 TXLNB 610220 sc-eQTL 7.11e-01 0.0675 0.182 0.051 B_Activated L2
ENSG00000164442 CITED2 527570 sc-eQTL 7.62e-01 0.0694 0.229 0.051 B_Activated L2
ENSG00000226571 AL592429.2 630856 sc-eQTL 8.45e-01 0.0447 0.229 0.051 B_Activated L2
ENSG00000112406 HECA 767138 sc-eQTL 1.39e-01 -0.245 0.165 0.051 CD8_TCM L2
ENSG00000135597 REPS1 913957 sc-eQTL 9.60e-01 0.00864 0.172 0.051 CD8_TCM L2
ENSG00000146386 ABRACL 873473 sc-eQTL 7.51e-01 0.0546 0.172 0.051 CD8_TCM L2
ENSG00000164442 CITED2 527570 sc-eQTL 7.29e-01 -0.0611 0.176 0.051 CD8_TCM L2
ENSG00000231329 AL031772.1 662565 sc-eQTL 6.80e-01 -0.0771 0.186 0.051 CD8_TCM L2
ENSG00000112406 HECA 767138 sc-eQTL 7.31e-01 -0.0679 0.197 0.05 CD8_TEM L2
ENSG00000135597 REPS1 913957 sc-eQTL 9.09e-01 -0.0235 0.205 0.05 CD8_TEM L2
ENSG00000146386 ABRACL 873473 sc-eQTL 7.36e-01 -0.0534 0.158 0.05 CD8_TEM L2
ENSG00000164442 CITED2 527570 sc-eQTL 2.54e-01 -0.196 0.171 0.05 CD8_TEM L2
ENSG00000231329 AL031772.1 662565 sc-eQTL 8.49e-01 -0.0372 0.195 0.05 CD8_TEM L2
ENSG00000112406 HECA 767138 sc-eQTL 3.35e-01 -0.241 0.249 0.052 PB L2
ENSG00000135597 REPS1 913957 sc-eQTL 3.26e-01 0.219 0.221 0.052 PB L2
ENSG00000146386 ABRACL 873473 sc-eQTL 5.62e-02 -0.295 0.153 0.052 PB L2
ENSG00000164440 TXLNB 610220 sc-eQTL 9.54e-01 0.0132 0.227 0.052 PB L2
ENSG00000164442 CITED2 527570 sc-eQTL 3.54e-01 -0.159 0.17 0.052 PB L2
ENSG00000226571 AL592429.2 630856 sc-eQTL 5.99e-01 -0.121 0.229 0.052 PB L2
ENSG00000112406 HECA 767138 sc-eQTL 4.34e-01 0.177 0.226 0.055 gdT L2
ENSG00000135597 REPS1 913957 sc-eQTL 9.50e-02 -0.391 0.232 0.055 gdT L2
ENSG00000146386 ABRACL 873473 sc-eQTL 4.62e-01 0.13 0.176 0.055 gdT L2
ENSG00000164442 CITED2 527570 sc-eQTL 2.35e-01 -0.242 0.203 0.055 gdT L2
ENSG00000112406 HECA 767138 sc-eQTL 6.25e-01 0.0919 0.188 0.051 pDC L2
ENSG00000135597 REPS1 913957 sc-eQTL 6.09e-01 0.0889 0.174 0.051 pDC L2
ENSG00000146386 ABRACL 873473 sc-eQTL 6.87e-01 -0.0766 0.19 0.051 pDC L2
ENSG00000164442 CITED2 527570 sc-eQTL 3.00e-01 -0.232 0.223 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112406 HECA 767138 eQTL 0.0457 0.053 0.0265 0.0 0.0 0.0319

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina