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Genes within 1Mb (chr6:139650029:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 876520 sc-eQTL 7.11e-01 0.0279 0.0752 0.353 B L1
ENSG00000112406 HECA 514949 sc-eQTL 7.70e-01 -0.0215 0.0732 0.353 B L1
ENSG00000135597 REPS1 661768 sc-eQTL 8.52e-01 -0.0121 0.0647 0.353 B L1
ENSG00000146386 ABRACL 621284 sc-eQTL 2.68e-01 0.0421 0.0379 0.353 B L1
ENSG00000164440 TXLNB 358031 sc-eQTL 7.61e-01 -0.0283 0.0931 0.353 B L1
ENSG00000164442 CITED2 275381 sc-eQTL 5.67e-01 -0.0336 0.0586 0.353 B L1
ENSG00000226571 AL592429.2 378667 sc-eQTL 6.82e-01 -0.0268 0.0652 0.353 B L1
ENSG00000024862 CCDC28A 876520 sc-eQTL 1.02e-01 -0.135 0.0825 0.353 CD4T L1
ENSG00000112406 HECA 514949 sc-eQTL 8.11e-01 -0.0166 0.0692 0.353 CD4T L1
ENSG00000135597 REPS1 661768 sc-eQTL 8.91e-01 0.00744 0.0544 0.353 CD4T L1
ENSG00000146386 ABRACL 621284 sc-eQTL 5.78e-01 -0.0222 0.0399 0.353 CD4T L1
ENSG00000164442 CITED2 275381 sc-eQTL 9.60e-01 -0.00345 0.0682 0.353 CD4T L1
ENSG00000231329 AL031772.1 410376 sc-eQTL 7.40e-01 0.0223 0.0672 0.353 CD4T L1
ENSG00000024862 CCDC28A 876520 sc-eQTL 9.03e-01 -0.0112 0.0913 0.353 CD8T L1
ENSG00000112406 HECA 514949 sc-eQTL 6.60e-01 -0.0287 0.0653 0.353 CD8T L1
ENSG00000135597 REPS1 661768 sc-eQTL 7.38e-01 0.0206 0.0614 0.353 CD8T L1
ENSG00000146386 ABRACL 621284 sc-eQTL 2.48e-01 -0.0404 0.0349 0.353 CD8T L1
ENSG00000164442 CITED2 275381 sc-eQTL 7.08e-01 -0.0249 0.0664 0.353 CD8T L1
ENSG00000231329 AL031772.1 410376 sc-eQTL 4.56e-01 0.0602 0.0806 0.353 CD8T L1
ENSG00000024862 CCDC28A 876520 sc-eQTL 4.23e-01 0.0712 0.0888 0.351 DC L1
ENSG00000112406 HECA 514949 sc-eQTL 8.49e-02 0.126 0.0727 0.351 DC L1
ENSG00000135540 NHSL1 957458 sc-eQTL 8.91e-02 0.138 0.081 0.351 DC L1
ENSG00000135597 REPS1 661768 sc-eQTL 4.63e-01 0.0529 0.072 0.351 DC L1
ENSG00000146386 ABRACL 621284 sc-eQTL 2.03e-01 0.0899 0.0704 0.351 DC L1
ENSG00000164442 CITED2 275381 sc-eQTL 9.84e-01 0.00167 0.0838 0.351 DC L1
ENSG00000225177 AL590617.2 957481 sc-eQTL 6.09e-01 -0.0437 0.0852 0.351 DC L1
ENSG00000024862 CCDC28A 876520 sc-eQTL 4.23e-02 -0.13 0.0638 0.353 Mono L1
ENSG00000112406 HECA 514949 sc-eQTL 8.93e-01 -0.00788 0.0588 0.353 Mono L1
ENSG00000135540 NHSL1 957458 sc-eQTL 7.94e-01 -0.022 0.0842 0.353 Mono L1
ENSG00000135597 REPS1 661768 sc-eQTL 9.53e-02 0.0821 0.049 0.353 Mono L1
ENSG00000146386 ABRACL 621284 sc-eQTL 2.20e-01 -0.0786 0.0639 0.353 Mono L1
ENSG00000164442 CITED2 275381 sc-eQTL 3.05e-02 -0.146 0.0671 0.353 Mono L1
ENSG00000225177 AL590617.2 957481 sc-eQTL 2.34e-01 -0.104 0.0873 0.353 Mono L1
ENSG00000024862 CCDC28A 876520 sc-eQTL 8.02e-01 0.0203 0.0805 0.352 NK L1
ENSG00000112406 HECA 514949 sc-eQTL 8.20e-01 -0.0158 0.0696 0.352 NK L1
ENSG00000135597 REPS1 661768 sc-eQTL 5.71e-01 0.0376 0.0662 0.352 NK L1
ENSG00000146386 ABRACL 621284 sc-eQTL 3.81e-01 0.0424 0.0483 0.352 NK L1
ENSG00000164442 CITED2 275381 sc-eQTL 2.83e-01 0.069 0.0641 0.352 NK L1
ENSG00000024862 CCDC28A 876520 sc-eQTL 2.75e-01 -0.103 0.0944 0.353 Other_T L1
ENSG00000112406 HECA 514949 sc-eQTL 5.39e-01 0.0421 0.0685 0.353 Other_T L1
ENSG00000135597 REPS1 661768 sc-eQTL 6.65e-01 -0.032 0.0737 0.353 Other_T L1
ENSG00000146386 ABRACL 621284 sc-eQTL 4.85e-01 -0.0337 0.0482 0.353 Other_T L1
ENSG00000164442 CITED2 275381 sc-eQTL 1.34e-02 0.139 0.0557 0.353 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 876520 sc-eQTL 4.54e-01 -0.0817 0.109 0.344 B_Activated L2
ENSG00000112406 HECA 514949 sc-eQTL 4.26e-01 0.0827 0.104 0.344 B_Activated L2
ENSG00000135597 REPS1 661768 sc-eQTL 2.12e-01 -0.135 0.108 0.344 B_Activated L2
ENSG00000146386 ABRACL 621284 sc-eQTL 6.04e-01 -0.0511 0.0983 0.344 B_Activated L2
ENSG00000164440 TXLNB 358031 sc-eQTL 1.34e-01 -0.126 0.0837 0.344 B_Activated L2
ENSG00000164442 CITED2 275381 sc-eQTL 3.54e-01 -0.0982 0.106 0.344 B_Activated L2
ENSG00000226571 AL592429.2 378667 sc-eQTL 8.96e-01 -0.0139 0.106 0.344 B_Activated L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 8.99e-01 -0.0116 0.0916 0.352 B_Intermediate L2
ENSG00000112406 HECA 514949 sc-eQTL 9.67e-01 0.00325 0.0794 0.352 B_Intermediate L2
ENSG00000135597 REPS1 661768 sc-eQTL 5.58e-01 -0.0502 0.0855 0.352 B_Intermediate L2
ENSG00000146386 ABRACL 621284 sc-eQTL 9.51e-01 -0.0045 0.0729 0.352 B_Intermediate L2
ENSG00000164440 TXLNB 358031 sc-eQTL 6.43e-02 0.165 0.0885 0.352 B_Intermediate L2
ENSG00000164442 CITED2 275381 sc-eQTL 6.03e-01 0.0428 0.0821 0.352 B_Intermediate L2
ENSG00000226571 AL592429.2 378667 sc-eQTL 5.62e-02 -0.169 0.0882 0.352 B_Intermediate L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 8.92e-01 -0.0127 0.0935 0.349 B_Memory L2
ENSG00000112406 HECA 514949 sc-eQTL 4.65e-01 -0.0591 0.0808 0.349 B_Memory L2
ENSG00000135597 REPS1 661768 sc-eQTL 7.80e-01 -0.0245 0.0876 0.349 B_Memory L2
ENSG00000146386 ABRACL 621284 sc-eQTL 9.79e-01 0.00181 0.0693 0.349 B_Memory L2
ENSG00000164440 TXLNB 358031 sc-eQTL 2.47e-01 0.102 0.0881 0.349 B_Memory L2
ENSG00000164442 CITED2 275381 sc-eQTL 5.51e-01 0.0485 0.0812 0.349 B_Memory L2
ENSG00000226571 AL592429.2 378667 sc-eQTL 6.05e-01 -0.0516 0.0997 0.349 B_Memory L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 6.82e-01 0.0364 0.0886 0.353 B_Naive1 L2
ENSG00000112406 HECA 514949 sc-eQTL 8.61e-01 -0.0135 0.0772 0.353 B_Naive1 L2
ENSG00000135597 REPS1 661768 sc-eQTL 6.99e-01 -0.0276 0.0715 0.353 B_Naive1 L2
ENSG00000146386 ABRACL 621284 sc-eQTL 1.35e-01 0.0747 0.0497 0.353 B_Naive1 L2
ENSG00000164440 TXLNB 358031 sc-eQTL 7.41e-01 -0.031 0.0936 0.353 B_Naive1 L2
ENSG00000164442 CITED2 275381 sc-eQTL 1.93e-01 -0.0886 0.0678 0.353 B_Naive1 L2
ENSG00000226571 AL592429.2 378667 sc-eQTL 5.62e-01 -0.0518 0.0893 0.353 B_Naive1 L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 9.28e-01 -0.0078 0.0865 0.35 B_Naive2 L2
ENSG00000112406 HECA 514949 sc-eQTL 7.02e-01 0.0312 0.0814 0.35 B_Naive2 L2
ENSG00000135597 REPS1 661768 sc-eQTL 4.17e-01 0.0631 0.0776 0.35 B_Naive2 L2
ENSG00000146386 ABRACL 621284 sc-eQTL 1.18e-01 0.0892 0.0569 0.35 B_Naive2 L2
ENSG00000164440 TXLNB 358031 sc-eQTL 9.72e-01 -0.00318 0.0906 0.35 B_Naive2 L2
ENSG00000164442 CITED2 275381 sc-eQTL 1.37e-01 -0.137 0.0919 0.35 B_Naive2 L2
ENSG00000226571 AL592429.2 378667 sc-eQTL 1.79e-01 0.114 0.0845 0.35 B_Naive2 L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 3.33e-02 -0.192 0.0896 0.345 CD4_CTL L2
ENSG00000112406 HECA 514949 sc-eQTL 5.68e-01 0.0524 0.0915 0.345 CD4_CTL L2
ENSG00000135597 REPS1 661768 sc-eQTL 4.15e-01 0.0724 0.0887 0.345 CD4_CTL L2
ENSG00000146386 ABRACL 621284 sc-eQTL 4.02e-01 0.068 0.0808 0.345 CD4_CTL L2
ENSG00000164442 CITED2 275381 sc-eQTL 2.76e-01 0.0886 0.0811 0.345 CD4_CTL L2
ENSG00000231329 AL031772.1 410376 sc-eQTL 5.95e-01 0.0446 0.0839 0.345 CD4_CTL L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 1.12e-01 -0.138 0.0864 0.353 CD4_Naive L2
ENSG00000112406 HECA 514949 sc-eQTL 4.74e-01 -0.0484 0.0675 0.353 CD4_Naive L2
ENSG00000135597 REPS1 661768 sc-eQTL 3.24e-01 0.0592 0.0598 0.353 CD4_Naive L2
ENSG00000146386 ABRACL 621284 sc-eQTL 5.05e-01 -0.0269 0.0403 0.353 CD4_Naive L2
ENSG00000164442 CITED2 275381 sc-eQTL 6.43e-01 -0.0318 0.0685 0.353 CD4_Naive L2
ENSG00000231329 AL031772.1 410376 sc-eQTL 2.31e-01 -0.0831 0.0691 0.353 CD4_Naive L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 2.32e-01 -0.103 0.0858 0.353 CD4_TCM L2
ENSG00000112406 HECA 514949 sc-eQTL 7.36e-01 0.0232 0.0688 0.353 CD4_TCM L2
ENSG00000135597 REPS1 661768 sc-eQTL 7.08e-02 -0.118 0.0648 0.353 CD4_TCM L2
ENSG00000146386 ABRACL 621284 sc-eQTL 2.30e-01 -0.0602 0.05 0.353 CD4_TCM L2
ENSG00000164442 CITED2 275381 sc-eQTL 9.41e-01 -0.00553 0.0746 0.353 CD4_TCM L2
ENSG00000231329 AL031772.1 410376 sc-eQTL 5.35e-01 0.0501 0.0806 0.353 CD4_TCM L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 3.07e-01 -0.0986 0.0962 0.353 CD4_TEM L2
ENSG00000112406 HECA 514949 sc-eQTL 4.38e-01 -0.0583 0.0749 0.353 CD4_TEM L2
ENSG00000135597 REPS1 661768 sc-eQTL 9.44e-01 -0.00576 0.0818 0.353 CD4_TEM L2
ENSG00000146386 ABRACL 621284 sc-eQTL 4.37e-01 -0.0454 0.0582 0.353 CD4_TEM L2
ENSG00000164442 CITED2 275381 sc-eQTL 6.20e-01 0.038 0.0765 0.353 CD4_TEM L2
ENSG00000231329 AL031772.1 410376 sc-eQTL 3.30e-02 0.17 0.0792 0.353 CD4_TEM L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 7.71e-01 -0.0291 0.0997 0.353 CD8_CTL L2
ENSG00000112406 HECA 514949 sc-eQTL 8.85e-01 -0.0106 0.0726 0.353 CD8_CTL L2
ENSG00000135597 REPS1 661768 sc-eQTL 6.52e-01 -0.0351 0.0777 0.353 CD8_CTL L2
ENSG00000146386 ABRACL 621284 sc-eQTL 8.33e-01 0.0132 0.0629 0.353 CD8_CTL L2
ENSG00000164442 CITED2 275381 sc-eQTL 6.70e-01 0.0312 0.0732 0.353 CD8_CTL L2
ENSG00000231329 AL031772.1 410376 sc-eQTL 9.17e-01 -0.00916 0.0879 0.353 CD8_CTL L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 7.43e-01 0.0307 0.0935 0.353 CD8_Naive L2
ENSG00000112406 HECA 514949 sc-eQTL 9.85e-01 -0.00132 0.0722 0.353 CD8_Naive L2
ENSG00000135597 REPS1 661768 sc-eQTL 3.65e-01 -0.0655 0.0723 0.353 CD8_Naive L2
ENSG00000146386 ABRACL 621284 sc-eQTL 7.69e-02 -0.0671 0.0377 0.353 CD8_Naive L2
ENSG00000164442 CITED2 275381 sc-eQTL 5.15e-02 -0.149 0.0761 0.353 CD8_Naive L2
ENSG00000231329 AL031772.1 410376 sc-eQTL 7.06e-01 0.0332 0.0879 0.353 CD8_Naive L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 5.64e-01 0.0607 0.105 0.345 CD8_TCM L2
ENSG00000112406 HECA 514949 sc-eQTL 7.36e-01 -0.026 0.0768 0.345 CD8_TCM L2
ENSG00000135597 REPS1 661768 sc-eQTL 6.44e-01 0.037 0.0798 0.345 CD8_TCM L2
ENSG00000146386 ABRACL 621284 sc-eQTL 2.04e-01 0.101 0.0792 0.345 CD8_TCM L2
ENSG00000164442 CITED2 275381 sc-eQTL 7.55e-02 0.145 0.0811 0.345 CD8_TCM L2
ENSG00000231329 AL031772.1 410376 sc-eQTL 4.59e-01 0.064 0.0862 0.345 CD8_TCM L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 5.85e-01 -0.053 0.0969 0.342 CD8_TEM L2
ENSG00000112406 HECA 514949 sc-eQTL 2.23e-01 -0.11 0.0905 0.342 CD8_TEM L2
ENSG00000135597 REPS1 661768 sc-eQTL 8.14e-01 0.0223 0.0945 0.342 CD8_TEM L2
ENSG00000146386 ABRACL 621284 sc-eQTL 1.77e-01 -0.0984 0.0725 0.342 CD8_TEM L2
ENSG00000164442 CITED2 275381 sc-eQTL 2.43e-01 0.0924 0.0789 0.342 CD8_TEM L2
ENSG00000231329 AL031772.1 410376 sc-eQTL 7.84e-01 0.0247 0.0901 0.342 CD8_TEM L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 4.21e-01 -0.0821 0.102 0.351 MAIT L2
ENSG00000112406 HECA 514949 sc-eQTL 9.17e-01 -0.0081 0.0776 0.351 MAIT L2
ENSG00000135597 REPS1 661768 sc-eQTL 4.31e-01 -0.0658 0.0834 0.351 MAIT L2
ENSG00000146386 ABRACL 621284 sc-eQTL 8.95e-01 -0.00815 0.0614 0.351 MAIT L2
ENSG00000164442 CITED2 275381 sc-eQTL 8.15e-02 0.126 0.0718 0.351 MAIT L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 6.34e-01 0.0457 0.0956 0.349 NK_CD56bright L2
ENSG00000112406 HECA 514949 sc-eQTL 9.64e-01 -0.00393 0.0867 0.349 NK_CD56bright L2
ENSG00000135597 REPS1 661768 sc-eQTL 8.90e-01 -0.0112 0.0809 0.349 NK_CD56bright L2
ENSG00000146386 ABRACL 621284 sc-eQTL 7.24e-01 0.0263 0.0745 0.349 NK_CD56bright L2
ENSG00000164442 CITED2 275381 sc-eQTL 7.00e-01 0.0308 0.0799 0.349 NK_CD56bright L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 6.82e-01 -0.0357 0.087 0.349 NK_CD56dim L2
ENSG00000112406 HECA 514949 sc-eQTL 9.79e-01 -0.00195 0.0749 0.349 NK_CD56dim L2
ENSG00000135597 REPS1 661768 sc-eQTL 5.70e-01 -0.0404 0.0709 0.349 NK_CD56dim L2
ENSG00000146386 ABRACL 621284 sc-eQTL 7.73e-01 0.0139 0.0481 0.349 NK_CD56dim L2
ENSG00000164442 CITED2 275381 sc-eQTL 2.88e-01 0.0682 0.0639 0.349 NK_CD56dim L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 4.96e-01 -0.0677 0.0991 0.349 NK_HLA L2
ENSG00000112406 HECA 514949 sc-eQTL 6.70e-01 0.0396 0.0928 0.349 NK_HLA L2
ENSG00000135597 REPS1 661768 sc-eQTL 2.45e-01 0.106 0.0913 0.349 NK_HLA L2
ENSG00000146386 ABRACL 621284 sc-eQTL 6.49e-01 -0.0343 0.0753 0.349 NK_HLA L2
ENSG00000164442 CITED2 275381 sc-eQTL 5.40e-01 0.0494 0.0804 0.349 NK_HLA L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 3.65e-01 0.08 0.0882 0.349 NK_cytokine L2
ENSG00000112406 HECA 514949 sc-eQTL 7.95e-01 0.0198 0.0761 0.349 NK_cytokine L2
ENSG00000135597 REPS1 661768 sc-eQTL 2.22e-01 0.0959 0.0783 0.349 NK_cytokine L2
ENSG00000146386 ABRACL 621284 sc-eQTL 2.48e-01 0.0585 0.0505 0.349 NK_cytokine L2
ENSG00000164442 CITED2 275381 sc-eQTL 1.33e-01 0.0993 0.0658 0.349 NK_cytokine L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 7.89e-01 -0.0288 0.107 0.363 PB L2
ENSG00000112406 HECA 514949 sc-eQTL 5.41e-01 0.0716 0.117 0.363 PB L2
ENSG00000135597 REPS1 661768 sc-eQTL 4.01e-01 -0.0873 0.104 0.363 PB L2
ENSG00000146386 ABRACL 621284 sc-eQTL 2.05e-01 -0.0921 0.0722 0.363 PB L2
ENSG00000164440 TXLNB 358031 sc-eQTL 7.74e-01 -0.0305 0.106 0.363 PB L2
ENSG00000164442 CITED2 275381 sc-eQTL 8.36e-01 -0.0166 0.08 0.363 PB L2
ENSG00000226571 AL592429.2 378667 sc-eQTL 5.14e-02 0.208 0.106 0.363 PB L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 6.30e-02 -0.179 0.0958 0.357 Pro_T L2
ENSG00000112406 HECA 514949 sc-eQTL 5.60e-01 -0.0444 0.076 0.357 Pro_T L2
ENSG00000135597 REPS1 661768 sc-eQTL 5.32e-01 0.0561 0.0896 0.357 Pro_T L2
ENSG00000146386 ABRACL 621284 sc-eQTL 1.22e-01 -0.0893 0.0575 0.357 Pro_T L2
ENSG00000164442 CITED2 275381 sc-eQTL 8.63e-01 -0.0119 0.0689 0.357 Pro_T L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 9.35e-01 0.00753 0.0929 0.353 Treg L2
ENSG00000112406 HECA 514949 sc-eQTL 6.43e-01 -0.0358 0.0771 0.353 Treg L2
ENSG00000135597 REPS1 661768 sc-eQTL 8.92e-01 0.0108 0.0799 0.353 Treg L2
ENSG00000146386 ABRACL 621284 sc-eQTL 2.34e-01 -0.0809 0.0678 0.353 Treg L2
ENSG00000164442 CITED2 275381 sc-eQTL 5.81e-01 0.0419 0.0759 0.353 Treg L2
ENSG00000231329 AL031772.1 410376 sc-eQTL 6.35e-01 -0.0413 0.0868 0.353 Treg L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 3.90e-01 0.077 0.0893 0.339 cDC L2
ENSG00000112406 HECA 514949 sc-eQTL 5.14e-01 0.0555 0.085 0.339 cDC L2
ENSG00000135540 NHSL1 957458 sc-eQTL 4.39e-01 0.0645 0.0831 0.339 cDC L2
ENSG00000135597 REPS1 661768 sc-eQTL 1.10e-01 0.153 0.0953 0.339 cDC L2
ENSG00000146386 ABRACL 621284 sc-eQTL 6.37e-01 -0.0371 0.0784 0.339 cDC L2
ENSG00000164442 CITED2 275381 sc-eQTL 7.43e-01 0.0274 0.0832 0.339 cDC L2
ENSG00000225177 AL590617.2 957481 sc-eQTL 9.53e-01 -0.00541 0.0919 0.339 cDC L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 6.96e-01 -0.0276 0.0704 0.353 cMono_IL1B L2
ENSG00000112406 HECA 514949 sc-eQTL 3.85e-01 -0.0506 0.0581 0.353 cMono_IL1B L2
ENSG00000135540 NHSL1 957458 sc-eQTL 9.09e-01 0.00975 0.0848 0.353 cMono_IL1B L2
ENSG00000135597 REPS1 661768 sc-eQTL 9.44e-03 0.195 0.0745 0.353 cMono_IL1B L2
ENSG00000146386 ABRACL 621284 sc-eQTL 6.75e-01 -0.0267 0.0637 0.353 cMono_IL1B L2
ENSG00000164442 CITED2 275381 sc-eQTL 9.31e-02 -0.112 0.0662 0.353 cMono_IL1B L2
ENSG00000225177 AL590617.2 957481 sc-eQTL 9.73e-01 0.00301 0.0888 0.353 cMono_IL1B L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 1.02e-02 -0.205 0.0791 0.353 cMono_S100A L2
ENSG00000112406 HECA 514949 sc-eQTL 1.93e-01 0.0883 0.0677 0.353 cMono_S100A L2
ENSG00000135540 NHSL1 957458 sc-eQTL 2.21e-01 -0.105 0.0858 0.353 cMono_S100A L2
ENSG00000135597 REPS1 661768 sc-eQTL 4.52e-01 -0.0613 0.0814 0.353 cMono_S100A L2
ENSG00000146386 ABRACL 621284 sc-eQTL 3.96e-01 -0.0601 0.0707 0.353 cMono_S100A L2
ENSG00000164442 CITED2 275381 sc-eQTL 4.88e-02 -0.138 0.0695 0.353 cMono_S100A L2
ENSG00000225177 AL590617.2 957481 sc-eQTL 1.48e-01 -0.136 0.0939 0.353 cMono_S100A L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 4.11e-01 0.0923 0.112 0.318 gdT L2
ENSG00000112406 HECA 514949 sc-eQTL 1.05e-01 0.172 0.106 0.318 gdT L2
ENSG00000135597 REPS1 661768 sc-eQTL 9.14e-01 -0.0119 0.11 0.318 gdT L2
ENSG00000146386 ABRACL 621284 sc-eQTL 6.32e-01 -0.0398 0.083 0.318 gdT L2
ENSG00000164442 CITED2 275381 sc-eQTL 9.70e-01 0.0036 0.0958 0.318 gdT L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 6.73e-01 0.0392 0.0928 0.349 intMono L2
ENSG00000112406 HECA 514949 sc-eQTL 5.46e-01 0.0461 0.0761 0.349 intMono L2
ENSG00000135540 NHSL1 957458 sc-eQTL 6.28e-01 0.0407 0.084 0.349 intMono L2
ENSG00000135597 REPS1 661768 sc-eQTL 3.10e-01 0.0881 0.0866 0.349 intMono L2
ENSG00000146386 ABRACL 621284 sc-eQTL 6.61e-02 -0.145 0.0785 0.349 intMono L2
ENSG00000164442 CITED2 275381 sc-eQTL 9.35e-02 -0.129 0.0764 0.349 intMono L2
ENSG00000225177 AL590617.2 957481 sc-eQTL 4.63e-02 -0.187 0.0933 0.349 intMono L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 5.51e-01 -0.0527 0.0882 0.353 ncMono L2
ENSG00000112406 HECA 514949 sc-eQTL 8.79e-01 -0.0123 0.0807 0.353 ncMono L2
ENSG00000135540 NHSL1 957458 sc-eQTL 8.10e-01 0.0204 0.0848 0.353 ncMono L2
ENSG00000135597 REPS1 661768 sc-eQTL 9.52e-01 0.00389 0.0639 0.353 ncMono L2
ENSG00000146386 ABRACL 621284 sc-eQTL 8.55e-01 0.0141 0.077 0.353 ncMono L2
ENSG00000164442 CITED2 275381 sc-eQTL 1.64e-02 -0.156 0.0644 0.353 ncMono L2
ENSG00000225177 AL590617.2 957481 sc-eQTL 2.59e-01 -0.106 0.0939 0.353 ncMono L2
ENSG00000024862 CCDC28A 876520 sc-eQTL 1.08e-01 0.165 0.102 0.325 pDC L2
ENSG00000112406 HECA 514949 sc-eQTL 8.38e-01 0.0179 0.0874 0.325 pDC L2
ENSG00000135540 NHSL1 957458 sc-eQTL 8.62e-02 0.137 0.0791 0.325 pDC L2
ENSG00000135597 REPS1 661768 sc-eQTL 7.79e-01 -0.0228 0.0809 0.325 pDC L2
ENSG00000146386 ABRACL 621284 sc-eQTL 8.89e-03 0.229 0.0865 0.325 pDC L2
ENSG00000164442 CITED2 275381 sc-eQTL 8.96e-01 -0.0136 0.104 0.325 pDC L2
ENSG00000225177 AL590617.2 957481 sc-eQTL 4.75e-01 -0.0573 0.0801 0.325 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 876520 sc-eQTL 7.84e-01 0.0243 0.0885 0.353 B_Memory LOneK1K
ENSG00000112406 HECA 514949 sc-eQTL 9.98e-01 -0.000197 0.0787 0.353 B_Memory LOneK1K
ENSG00000135597 REPS1 661768 sc-eQTL 2.97e-01 -0.0852 0.0814 0.353 B_Memory LOneK1K
ENSG00000146386 ABRACL 621284 sc-eQTL 9.80e-01 0.00144 0.0566 0.353 B_Memory LOneK1K
ENSG00000164440 TXLNB 358031 sc-eQTL 3.17e-01 0.0938 0.0934 0.353 B_Memory LOneK1K
ENSG00000164442 CITED2 275381 sc-eQTL 9.85e-01 0.00153 0.0795 0.353 B_Memory LOneK1K
ENSG00000226571 AL592429.2 378667 sc-eQTL 3.36e-01 -0.0889 0.0922 0.353 B_Memory LOneK1K
ENSG00000024862 CCDC28A 876520 sc-eQTL 6.46e-01 0.0379 0.0824 0.353 B_Naive LOneK1K
ENSG00000112406 HECA 514949 sc-eQTL 9.11e-01 -0.00867 0.0771 0.353 B_Naive LOneK1K
ENSG00000135597 REPS1 661768 sc-eQTL 5.89e-01 -0.0355 0.0657 0.353 B_Naive LOneK1K
ENSG00000146386 ABRACL 621284 sc-eQTL 2.81e-01 0.0497 0.046 0.353 B_Naive LOneK1K
ENSG00000164440 TXLNB 358031 sc-eQTL 9.39e-01 -0.00734 0.0966 0.353 B_Naive LOneK1K
ENSG00000164442 CITED2 275381 sc-eQTL 2.96e-01 -0.0732 0.0699 0.353 B_Naive LOneK1K
ENSG00000226571 AL592429.2 378667 sc-eQTL 6.44e-01 0.0382 0.0824 0.353 B_Naive LOneK1K
ENSG00000024862 CCDC28A 876520 sc-eQTL 2.45e-02 -0.145 0.064 0.353 CD14_Mono LOneK1K
ENSG00000112406 HECA 514949 sc-eQTL 9.85e-01 -0.00113 0.0581 0.353 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 957458 sc-eQTL 5.56e-01 -0.05 0.0849 0.353 CD14_Mono LOneK1K
ENSG00000135597 REPS1 661768 sc-eQTL 1.12e-01 0.111 0.0695 0.353 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 621284 sc-eQTL 4.48e-01 -0.0472 0.0621 0.353 CD14_Mono LOneK1K
ENSG00000164442 CITED2 275381 sc-eQTL 6.43e-02 -0.126 0.0675 0.353 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 957481 sc-eQTL 8.10e-01 -0.0219 0.0911 0.353 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 876520 sc-eQTL 3.53e-01 -0.0809 0.087 0.351 CD16_Mono LOneK1K
ENSG00000112406 HECA 514949 sc-eQTL 9.65e-01 0.0033 0.0744 0.351 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 957458 sc-eQTL 2.27e-01 0.0999 0.0824 0.351 CD16_Mono LOneK1K
ENSG00000135597 REPS1 661768 sc-eQTL 2.86e-01 0.0549 0.0514 0.351 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 621284 sc-eQTL 1.57e-01 -0.107 0.075 0.351 CD16_Mono LOneK1K
ENSG00000164442 CITED2 275381 sc-eQTL 3.44e-03 -0.188 0.0636 0.351 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 957481 sc-eQTL 2.10e-02 -0.21 0.0903 0.351 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 876520 sc-eQTL 9.40e-01 0.00632 0.0837 0.349 NK_CD56dim LOneK1K
ENSG00000112406 HECA 514949 sc-eQTL 8.07e-01 -0.0175 0.0714 0.349 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 661768 sc-eQTL 5.72e-01 0.0395 0.0697 0.349 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 621284 sc-eQTL 8.02e-01 0.0113 0.045 0.349 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 275381 sc-eQTL 1.75e-01 0.0883 0.0648 0.349 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000164442 \N 275381 1.28e-06 1.01e-06 2.74e-07 1.17e-06 3.47e-07 5.88e-07 1.58e-06 3.82e-07 1.49e-06 5.63e-07 1.84e-06 7.53e-07 2.34e-06 2.89e-07 5.58e-07 9.23e-07 9.01e-07 7.21e-07 8.48e-07 6.46e-07 7.54e-07 1.7e-06 8.92e-07 5.77e-07 2.21e-06 5.67e-07 9.18e-07 8.91e-07 1.48e-06 1.29e-06 6.73e-07 2.98e-07 2.33e-07 6.86e-07 5.3e-07 4.45e-07 6.22e-07 2.39e-07 5.03e-07 2.8e-07 2.96e-07 1.63e-06 9.6e-08 6.53e-08 2.62e-07 1.35e-07 2.24e-07 3.8e-08 1.16e-07