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Genes within 1Mb (chr6:139581633:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 808124 sc-eQTL 7.63e-01 -0.0233 0.0771 0.301 B L1
ENSG00000112406 HECA 446553 sc-eQTL 3.44e-01 0.071 0.0748 0.301 B L1
ENSG00000135597 REPS1 593372 sc-eQTL 2.36e-02 0.149 0.0655 0.301 B L1
ENSG00000146386 ABRACL 552888 sc-eQTL 6.66e-01 0.0168 0.0389 0.301 B L1
ENSG00000164440 TXLNB 289635 sc-eQTL 6.91e-01 0.038 0.0954 0.301 B L1
ENSG00000164442 CITED2 206985 sc-eQTL 7.54e-01 -0.0189 0.0601 0.301 B L1
ENSG00000226571 AL592429.2 310271 sc-eQTL 3.25e-01 0.0658 0.0667 0.301 B L1
ENSG00000024862 CCDC28A 808124 sc-eQTL 9.51e-01 0.00514 0.0839 0.301 CD4T L1
ENSG00000112406 HECA 446553 sc-eQTL 2.38e-01 0.0826 0.0697 0.301 CD4T L1
ENSG00000135597 REPS1 593372 sc-eQTL 2.93e-01 -0.0578 0.0549 0.301 CD4T L1
ENSG00000146386 ABRACL 552888 sc-eQTL 8.52e-01 -0.00752 0.0403 0.301 CD4T L1
ENSG00000164442 CITED2 206985 sc-eQTL 4.81e-01 0.0486 0.0688 0.301 CD4T L1
ENSG00000231329 AL031772.1 341980 sc-eQTL 8.97e-02 -0.115 0.0675 0.301 CD4T L1
ENSG00000024862 CCDC28A 808124 sc-eQTL 4.77e-01 0.0657 0.0921 0.301 CD8T L1
ENSG00000112406 HECA 446553 sc-eQTL 3.60e-01 0.0603 0.0658 0.301 CD8T L1
ENSG00000135597 REPS1 593372 sc-eQTL 3.37e-01 0.0596 0.0619 0.301 CD8T L1
ENSG00000146386 ABRACL 552888 sc-eQTL 3.49e-01 -0.0331 0.0353 0.301 CD8T L1
ENSG00000164442 CITED2 206985 sc-eQTL 3.25e-01 0.0661 0.0669 0.301 CD8T L1
ENSG00000231329 AL031772.1 341980 sc-eQTL 4.22e-01 -0.0654 0.0814 0.301 CD8T L1
ENSG00000024862 CCDC28A 808124 sc-eQTL 1.15e-01 0.147 0.0927 0.291 DC L1
ENSG00000112406 HECA 446553 sc-eQTL 7.22e-01 0.0274 0.0768 0.291 DC L1
ENSG00000135540 NHSL1 889062 sc-eQTL 1.45e-01 0.124 0.0851 0.291 DC L1
ENSG00000135597 REPS1 593372 sc-eQTL 2.54e-01 0.0864 0.0754 0.291 DC L1
ENSG00000146386 ABRACL 552888 sc-eQTL 9.09e-01 -0.00851 0.0741 0.291 DC L1
ENSG00000164442 CITED2 206985 sc-eQTL 2.89e-01 -0.0932 0.0877 0.291 DC L1
ENSG00000225177 AL590617.2 889085 sc-eQTL 8.76e-01 -0.014 0.0894 0.291 DC L1
ENSG00000024862 CCDC28A 808124 sc-eQTL 6.55e-01 -0.0294 0.0656 0.301 Mono L1
ENSG00000112406 HECA 446553 sc-eQTL 9.74e-01 0.00194 0.0599 0.301 Mono L1
ENSG00000135540 NHSL1 889062 sc-eQTL 2.44e-02 0.192 0.0847 0.301 Mono L1
ENSG00000135597 REPS1 593372 sc-eQTL 8.46e-01 0.00978 0.0502 0.301 Mono L1
ENSG00000146386 ABRACL 552888 sc-eQTL 4.71e-01 -0.0471 0.0653 0.301 Mono L1
ENSG00000164442 CITED2 206985 sc-eQTL 4.60e-02 -0.137 0.0685 0.301 Mono L1
ENSG00000225177 AL590617.2 889085 sc-eQTL 6.64e-01 -0.0388 0.0891 0.301 Mono L1
ENSG00000024862 CCDC28A 808124 sc-eQTL 5.56e-02 0.158 0.0819 0.298 NK L1
ENSG00000112406 HECA 446553 sc-eQTL 3.57e-01 0.0658 0.0713 0.298 NK L1
ENSG00000135597 REPS1 593372 sc-eQTL 4.27e-01 0.054 0.0679 0.298 NK L1
ENSG00000146386 ABRACL 552888 sc-eQTL 8.34e-01 0.0104 0.0496 0.298 NK L1
ENSG00000164442 CITED2 206985 sc-eQTL 8.90e-01 0.00915 0.066 0.298 NK L1
ENSG00000024862 CCDC28A 808124 sc-eQTL 8.69e-01 0.0159 0.0965 0.301 Other_T L1
ENSG00000112406 HECA 446553 sc-eQTL 9.66e-01 0.00296 0.0699 0.301 Other_T L1
ENSG00000135597 REPS1 593372 sc-eQTL 9.32e-01 -0.00642 0.0752 0.301 Other_T L1
ENSG00000146386 ABRACL 552888 sc-eQTL 6.97e-01 -0.0192 0.0492 0.301 Other_T L1
ENSG00000164442 CITED2 206985 sc-eQTL 7.75e-02 0.101 0.0572 0.301 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 808124 sc-eQTL 9.35e-01 0.00863 0.105 0.306 B_Activated L2
ENSG00000112406 HECA 446553 sc-eQTL 3.00e-01 0.104 0.1 0.306 B_Activated L2
ENSG00000135597 REPS1 593372 sc-eQTL 1.76e-01 0.142 0.105 0.306 B_Activated L2
ENSG00000146386 ABRACL 552888 sc-eQTL 5.86e-01 -0.0518 0.0951 0.306 B_Activated L2
ENSG00000164440 TXLNB 289635 sc-eQTL 2.64e-01 0.091 0.0812 0.306 B_Activated L2
ENSG00000164442 CITED2 206985 sc-eQTL 7.17e-01 -0.0372 0.102 0.306 B_Activated L2
ENSG00000226571 AL592429.2 310271 sc-eQTL 7.24e-01 0.0361 0.102 0.306 B_Activated L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 7.25e-01 -0.0331 0.0938 0.3 B_Intermediate L2
ENSG00000112406 HECA 446553 sc-eQTL 6.55e-01 0.0364 0.0813 0.3 B_Intermediate L2
ENSG00000135597 REPS1 593372 sc-eQTL 2.59e-02 0.194 0.0867 0.3 B_Intermediate L2
ENSG00000146386 ABRACL 552888 sc-eQTL 3.31e-01 -0.0726 0.0745 0.3 B_Intermediate L2
ENSG00000164440 TXLNB 289635 sc-eQTL 2.59e-01 0.103 0.0912 0.3 B_Intermediate L2
ENSG00000164442 CITED2 206985 sc-eQTL 9.65e-01 -0.0037 0.0842 0.3 B_Intermediate L2
ENSG00000226571 AL592429.2 310271 sc-eQTL 2.83e-01 0.0978 0.0909 0.3 B_Intermediate L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 4.69e-01 0.07 0.0965 0.304 B_Memory L2
ENSG00000112406 HECA 446553 sc-eQTL 9.76e-01 -0.00253 0.0835 0.304 B_Memory L2
ENSG00000135597 REPS1 593372 sc-eQTL 3.87e-01 0.0783 0.0904 0.304 B_Memory L2
ENSG00000146386 ABRACL 552888 sc-eQTL 6.57e-01 -0.0318 0.0716 0.304 B_Memory L2
ENSG00000164440 TXLNB 289635 sc-eQTL 8.69e-01 -0.015 0.0913 0.304 B_Memory L2
ENSG00000164442 CITED2 206985 sc-eQTL 4.19e-02 -0.17 0.0831 0.304 B_Memory L2
ENSG00000226571 AL592429.2 310271 sc-eQTL 4.09e-01 0.0851 0.103 0.304 B_Memory L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 5.99e-01 0.0475 0.0902 0.301 B_Naive1 L2
ENSG00000112406 HECA 446553 sc-eQTL 5.72e-02 0.149 0.078 0.301 B_Naive1 L2
ENSG00000135597 REPS1 593372 sc-eQTL 2.80e-01 0.0786 0.0726 0.301 B_Naive1 L2
ENSG00000146386 ABRACL 552888 sc-eQTL 5.29e-01 0.0321 0.0509 0.301 B_Naive1 L2
ENSG00000164440 TXLNB 289635 sc-eQTL 5.38e-01 -0.0588 0.0953 0.301 B_Naive1 L2
ENSG00000164442 CITED2 206985 sc-eQTL 8.96e-01 -0.00908 0.0694 0.301 B_Naive1 L2
ENSG00000226571 AL592429.2 310271 sc-eQTL 8.70e-02 -0.156 0.0904 0.301 B_Naive1 L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 8.18e-01 -0.0203 0.0878 0.303 B_Naive2 L2
ENSG00000112406 HECA 446553 sc-eQTL 4.36e-01 0.0645 0.0826 0.303 B_Naive2 L2
ENSG00000135597 REPS1 593372 sc-eQTL 3.34e-01 0.0763 0.0787 0.303 B_Naive2 L2
ENSG00000146386 ABRACL 552888 sc-eQTL 1.32e-01 0.0874 0.0578 0.303 B_Naive2 L2
ENSG00000164440 TXLNB 289635 sc-eQTL 4.21e-01 0.074 0.0918 0.303 B_Naive2 L2
ENSG00000164442 CITED2 206985 sc-eQTL 9.77e-02 -0.155 0.0932 0.303 B_Naive2 L2
ENSG00000226571 AL592429.2 310271 sc-eQTL 4.98e-01 0.0584 0.0861 0.303 B_Naive2 L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 2.31e-01 0.11 0.0917 0.302 CD4_CTL L2
ENSG00000112406 HECA 446553 sc-eQTL 7.16e-01 0.0339 0.0928 0.302 CD4_CTL L2
ENSG00000135597 REPS1 593372 sc-eQTL 2.03e-01 -0.115 0.0898 0.302 CD4_CTL L2
ENSG00000146386 ABRACL 552888 sc-eQTL 5.97e-02 0.154 0.0814 0.302 CD4_CTL L2
ENSG00000164442 CITED2 206985 sc-eQTL 8.14e-01 -0.0195 0.0825 0.302 CD4_CTL L2
ENSG00000231329 AL031772.1 341980 sc-eQTL 3.20e-01 -0.0846 0.0849 0.302 CD4_CTL L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 3.84e-01 -0.0764 0.0876 0.301 CD4_Naive L2
ENSG00000112406 HECA 446553 sc-eQTL 2.44e-01 0.0794 0.068 0.301 CD4_Naive L2
ENSG00000135597 REPS1 593372 sc-eQTL 7.52e-01 -0.0191 0.0605 0.301 CD4_Naive L2
ENSG00000146386 ABRACL 552888 sc-eQTL 7.88e-01 -0.011 0.0407 0.301 CD4_Naive L2
ENSG00000164442 CITED2 206985 sc-eQTL 3.12e-01 0.07 0.069 0.301 CD4_Naive L2
ENSG00000231329 AL031772.1 341980 sc-eQTL 7.27e-01 -0.0245 0.0699 0.301 CD4_Naive L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 1.60e-01 0.121 0.0861 0.301 CD4_TCM L2
ENSG00000112406 HECA 446553 sc-eQTL 2.73e-01 0.0758 0.069 0.301 CD4_TCM L2
ENSG00000135597 REPS1 593372 sc-eQTL 7.77e-01 -0.0186 0.0656 0.301 CD4_TCM L2
ENSG00000146386 ABRACL 552888 sc-eQTL 8.89e-01 -0.00702 0.0504 0.301 CD4_TCM L2
ENSG00000164442 CITED2 206985 sc-eQTL 7.14e-01 0.0275 0.075 0.301 CD4_TCM L2
ENSG00000231329 AL031772.1 341980 sc-eQTL 1.41e-02 -0.198 0.0799 0.301 CD4_TCM L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 8.74e-01 0.0154 0.0972 0.301 CD4_TEM L2
ENSG00000112406 HECA 446553 sc-eQTL 6.80e-01 0.0312 0.0756 0.301 CD4_TEM L2
ENSG00000135597 REPS1 593372 sc-eQTL 7.98e-01 -0.0211 0.0824 0.301 CD4_TEM L2
ENSG00000146386 ABRACL 552888 sc-eQTL 7.53e-01 -0.0185 0.0588 0.301 CD4_TEM L2
ENSG00000164442 CITED2 206985 sc-eQTL 5.40e-01 -0.0473 0.0771 0.301 CD4_TEM L2
ENSG00000231329 AL031772.1 341980 sc-eQTL 6.82e-01 -0.0331 0.0807 0.301 CD4_TEM L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 1.35e-01 0.15 0.0995 0.301 CD8_CTL L2
ENSG00000112406 HECA 446553 sc-eQTL 4.25e-01 0.0582 0.0728 0.301 CD8_CTL L2
ENSG00000135597 REPS1 593372 sc-eQTL 7.77e-01 -0.0221 0.078 0.301 CD8_CTL L2
ENSG00000146386 ABRACL 552888 sc-eQTL 4.67e-01 0.046 0.063 0.301 CD8_CTL L2
ENSG00000164442 CITED2 206985 sc-eQTL 2.32e-01 0.0878 0.0732 0.301 CD8_CTL L2
ENSG00000231329 AL031772.1 341980 sc-eQTL 9.64e-01 -0.00399 0.0882 0.301 CD8_CTL L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 8.37e-01 0.0195 0.0951 0.301 CD8_Naive L2
ENSG00000112406 HECA 446553 sc-eQTL 9.48e-02 0.122 0.0729 0.301 CD8_Naive L2
ENSG00000135597 REPS1 593372 sc-eQTL 5.58e-02 0.14 0.0729 0.301 CD8_Naive L2
ENSG00000146386 ABRACL 552888 sc-eQTL 8.28e-01 0.00841 0.0386 0.301 CD8_Naive L2
ENSG00000164442 CITED2 206985 sc-eQTL 3.10e-01 0.0792 0.0778 0.301 CD8_Naive L2
ENSG00000231329 AL031772.1 341980 sc-eQTL 3.64e-01 -0.081 0.0891 0.301 CD8_Naive L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 6.42e-01 0.0503 0.108 0.301 CD8_TCM L2
ENSG00000112406 HECA 446553 sc-eQTL 5.56e-01 0.0465 0.0789 0.301 CD8_TCM L2
ENSG00000135597 REPS1 593372 sc-eQTL 2.99e-01 -0.0853 0.0819 0.301 CD8_TCM L2
ENSG00000146386 ABRACL 552888 sc-eQTL 1.35e-01 0.122 0.0814 0.301 CD8_TCM L2
ENSG00000164442 CITED2 206985 sc-eQTL 9.98e-01 0.000203 0.0841 0.301 CD8_TCM L2
ENSG00000231329 AL031772.1 341980 sc-eQTL 9.36e-01 -0.00714 0.0888 0.301 CD8_TCM L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 5.69e-01 0.0554 0.0971 0.292 CD8_TEM L2
ENSG00000112406 HECA 446553 sc-eQTL 8.92e-01 0.0124 0.091 0.292 CD8_TEM L2
ENSG00000135597 REPS1 593372 sc-eQTL 4.98e-01 0.0643 0.0946 0.292 CD8_TEM L2
ENSG00000146386 ABRACL 552888 sc-eQTL 4.66e-01 -0.0533 0.0729 0.292 CD8_TEM L2
ENSG00000164442 CITED2 206985 sc-eQTL 7.78e-01 0.0224 0.0793 0.292 CD8_TEM L2
ENSG00000231329 AL031772.1 341980 sc-eQTL 5.35e-01 -0.056 0.0901 0.292 CD8_TEM L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 9.44e-01 0.00759 0.107 0.297 MAIT L2
ENSG00000112406 HECA 446553 sc-eQTL 2.88e-01 -0.0864 0.0811 0.297 MAIT L2
ENSG00000135597 REPS1 593372 sc-eQTL 8.86e-01 0.0125 0.0876 0.297 MAIT L2
ENSG00000146386 ABRACL 552888 sc-eQTL 5.72e-02 0.122 0.0638 0.297 MAIT L2
ENSG00000164442 CITED2 206985 sc-eQTL 1.74e-01 0.103 0.0755 0.297 MAIT L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 7.51e-01 -0.0305 0.0959 0.302 NK_CD56bright L2
ENSG00000112406 HECA 446553 sc-eQTL 8.08e-01 0.0212 0.087 0.302 NK_CD56bright L2
ENSG00000135597 REPS1 593372 sc-eQTL 9.58e-01 -0.00423 0.0811 0.302 NK_CD56bright L2
ENSG00000146386 ABRACL 552888 sc-eQTL 7.36e-01 0.0252 0.0747 0.302 NK_CD56bright L2
ENSG00000164442 CITED2 206985 sc-eQTL 9.02e-01 -0.0099 0.0802 0.302 NK_CD56bright L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 3.94e-02 0.183 0.0882 0.3 NK_CD56dim L2
ENSG00000112406 HECA 446553 sc-eQTL 2.84e-01 0.0821 0.0765 0.3 NK_CD56dim L2
ENSG00000135597 REPS1 593372 sc-eQTL 6.89e-01 0.0291 0.0727 0.3 NK_CD56dim L2
ENSG00000146386 ABRACL 552888 sc-eQTL 8.46e-01 0.0096 0.0492 0.3 NK_CD56dim L2
ENSG00000164442 CITED2 206985 sc-eQTL 6.34e-01 -0.0313 0.0656 0.3 NK_CD56dim L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 4.20e-02 0.208 0.102 0.297 NK_HLA L2
ENSG00000112406 HECA 446553 sc-eQTL 3.65e-01 0.087 0.0959 0.297 NK_HLA L2
ENSG00000135597 REPS1 593372 sc-eQTL 3.60e-01 0.0869 0.0947 0.297 NK_HLA L2
ENSG00000146386 ABRACL 552888 sc-eQTL 7.11e-01 0.029 0.078 0.297 NK_HLA L2
ENSG00000164442 CITED2 206985 sc-eQTL 3.43e-01 0.079 0.0832 0.297 NK_HLA L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 4.67e-01 0.067 0.092 0.3 NK_cytokine L2
ENSG00000112406 HECA 446553 sc-eQTL 7.14e-01 0.0291 0.0794 0.3 NK_cytokine L2
ENSG00000135597 REPS1 593372 sc-eQTL 7.65e-01 0.0246 0.0819 0.3 NK_cytokine L2
ENSG00000146386 ABRACL 552888 sc-eQTL 9.55e-01 0.00299 0.0528 0.3 NK_cytokine L2
ENSG00000164442 CITED2 206985 sc-eQTL 4.02e-01 0.0577 0.0688 0.3 NK_cytokine L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 9.62e-01 -0.00487 0.102 0.33 PB L2
ENSG00000112406 HECA 446553 sc-eQTL 3.47e-01 0.105 0.111 0.33 PB L2
ENSG00000135597 REPS1 593372 sc-eQTL 8.78e-01 -0.0152 0.0989 0.33 PB L2
ENSG00000146386 ABRACL 552888 sc-eQTL 6.22e-01 0.0342 0.0692 0.33 PB L2
ENSG00000164440 TXLNB 289635 sc-eQTL 4.14e-01 0.0827 0.101 0.33 PB L2
ENSG00000164442 CITED2 206985 sc-eQTL 7.01e-01 -0.0293 0.0761 0.33 PB L2
ENSG00000226571 AL592429.2 310271 sc-eQTL 3.64e-01 0.0928 0.102 0.33 PB L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 7.15e-01 -0.0359 0.0984 0.304 Pro_T L2
ENSG00000112406 HECA 446553 sc-eQTL 9.40e-01 0.00582 0.0775 0.304 Pro_T L2
ENSG00000135597 REPS1 593372 sc-eQTL 8.37e-01 -0.0188 0.0913 0.304 Pro_T L2
ENSG00000146386 ABRACL 552888 sc-eQTL 4.70e-01 -0.0425 0.0588 0.304 Pro_T L2
ENSG00000164442 CITED2 206985 sc-eQTL 9.05e-01 0.00838 0.0701 0.304 Pro_T L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 9.07e-01 -0.0112 0.0953 0.301 Treg L2
ENSG00000112406 HECA 446553 sc-eQTL 1.57e-01 -0.112 0.0788 0.301 Treg L2
ENSG00000135597 REPS1 593372 sc-eQTL 1.62e-01 -0.114 0.0815 0.301 Treg L2
ENSG00000146386 ABRACL 552888 sc-eQTL 2.01e-01 0.0891 0.0695 0.301 Treg L2
ENSG00000164442 CITED2 206985 sc-eQTL 2.51e-01 -0.0894 0.0776 0.301 Treg L2
ENSG00000231329 AL031772.1 341980 sc-eQTL 3.32e-01 -0.0864 0.0889 0.301 Treg L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 3.39e-01 0.0896 0.0934 0.3 cDC L2
ENSG00000112406 HECA 446553 sc-eQTL 7.63e-01 0.0269 0.0891 0.3 cDC L2
ENSG00000135540 NHSL1 889062 sc-eQTL 1.70e-01 0.12 0.0867 0.3 cDC L2
ENSG00000135597 REPS1 593372 sc-eQTL 5.26e-01 0.0638 0.1 0.3 cDC L2
ENSG00000146386 ABRACL 552888 sc-eQTL 4.42e-01 -0.0632 0.082 0.3 cDC L2
ENSG00000164442 CITED2 206985 sc-eQTL 6.28e-01 -0.0423 0.0871 0.3 cDC L2
ENSG00000225177 AL590617.2 889085 sc-eQTL 9.19e-01 0.00985 0.0962 0.3 cDC L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 4.63e-01 0.0531 0.0723 0.301 cMono_IL1B L2
ENSG00000112406 HECA 446553 sc-eQTL 8.01e-01 0.0151 0.0598 0.301 cMono_IL1B L2
ENSG00000135540 NHSL1 889062 sc-eQTL 6.72e-03 0.234 0.0857 0.301 cMono_IL1B L2
ENSG00000135597 REPS1 593372 sc-eQTL 6.58e-01 0.0345 0.0778 0.301 cMono_IL1B L2
ENSG00000146386 ABRACL 552888 sc-eQTL 3.28e-01 -0.0641 0.0653 0.301 cMono_IL1B L2
ENSG00000164442 CITED2 206985 sc-eQTL 1.35e-01 -0.102 0.0681 0.301 cMono_IL1B L2
ENSG00000225177 AL590617.2 889085 sc-eQTL 2.62e-01 -0.102 0.091 0.301 cMono_IL1B L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 2.15e-01 -0.103 0.083 0.301 cMono_S100A L2
ENSG00000112406 HECA 446553 sc-eQTL 5.38e-01 0.0434 0.0704 0.301 cMono_S100A L2
ENSG00000135540 NHSL1 889062 sc-eQTL 7.34e-01 0.0304 0.0892 0.301 cMono_S100A L2
ENSG00000135597 REPS1 593372 sc-eQTL 6.13e-01 -0.0428 0.0844 0.301 cMono_S100A L2
ENSG00000146386 ABRACL 552888 sc-eQTL 7.86e-01 0.02 0.0734 0.301 cMono_S100A L2
ENSG00000164442 CITED2 206985 sc-eQTL 3.37e-01 -0.0698 0.0725 0.301 cMono_S100A L2
ENSG00000225177 AL590617.2 889085 sc-eQTL 9.50e-01 -0.00615 0.0978 0.301 cMono_S100A L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 7.52e-01 0.0373 0.118 0.288 gdT L2
ENSG00000112406 HECA 446553 sc-eQTL 3.12e-01 0.113 0.111 0.288 gdT L2
ENSG00000135597 REPS1 593372 sc-eQTL 9.23e-01 -0.0112 0.116 0.288 gdT L2
ENSG00000146386 ABRACL 552888 sc-eQTL 3.16e-01 -0.0872 0.0867 0.288 gdT L2
ENSG00000164442 CITED2 206985 sc-eQTL 3.63e-01 0.0914 0.1 0.288 gdT L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 4.62e-01 -0.0729 0.099 0.293 intMono L2
ENSG00000112406 HECA 446553 sc-eQTL 4.72e-02 0.161 0.0806 0.293 intMono L2
ENSG00000135540 NHSL1 889062 sc-eQTL 1.80e-01 0.12 0.0893 0.293 intMono L2
ENSG00000135597 REPS1 593372 sc-eQTL 8.19e-01 0.0213 0.0927 0.293 intMono L2
ENSG00000146386 ABRACL 552888 sc-eQTL 1.19e-01 -0.132 0.084 0.293 intMono L2
ENSG00000164442 CITED2 206985 sc-eQTL 9.49e-01 0.00521 0.0821 0.293 intMono L2
ENSG00000225177 AL590617.2 889085 sc-eQTL 5.86e-01 -0.0549 0.101 0.293 intMono L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 9.35e-01 0.00743 0.0907 0.292 ncMono L2
ENSG00000112406 HECA 446553 sc-eQTL 3.92e-01 0.0709 0.0827 0.292 ncMono L2
ENSG00000135540 NHSL1 889062 sc-eQTL 9.32e-02 0.146 0.0865 0.292 ncMono L2
ENSG00000135597 REPS1 593372 sc-eQTL 5.38e-01 0.0404 0.0656 0.292 ncMono L2
ENSG00000146386 ABRACL 552888 sc-eQTL 1.63e-01 0.11 0.0787 0.292 ncMono L2
ENSG00000164442 CITED2 206985 sc-eQTL 1.16e-01 -0.105 0.0667 0.292 ncMono L2
ENSG00000225177 AL590617.2 889085 sc-eQTL 8.95e-01 0.0128 0.0967 0.292 ncMono L2
ENSG00000024862 CCDC28A 808124 sc-eQTL 3.13e-03 0.305 0.102 0.297 pDC L2
ENSG00000112406 HECA 446553 sc-eQTL 9.04e-01 0.0107 0.0886 0.297 pDC L2
ENSG00000135540 NHSL1 889062 sc-eQTL 7.98e-01 -0.0208 0.081 0.297 pDC L2
ENSG00000135597 REPS1 593372 sc-eQTL 2.38e-01 0.0968 0.0817 0.297 pDC L2
ENSG00000146386 ABRACL 552888 sc-eQTL 1.37e-01 0.133 0.089 0.297 pDC L2
ENSG00000164442 CITED2 206985 sc-eQTL 4.31e-01 -0.0831 0.105 0.297 pDC L2
ENSG00000225177 AL590617.2 889085 sc-eQTL 4.79e-01 -0.0577 0.0812 0.297 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 808124 sc-eQTL 5.48e-01 0.0541 0.0898 0.301 B_Memory LOneK1K
ENSG00000112406 HECA 446553 sc-eQTL 7.35e-01 0.0271 0.08 0.301 B_Memory LOneK1K
ENSG00000135597 REPS1 593372 sc-eQTL 2.49e-02 0.185 0.082 0.301 B_Memory LOneK1K
ENSG00000146386 ABRACL 552888 sc-eQTL 5.37e-01 -0.0355 0.0574 0.301 B_Memory LOneK1K
ENSG00000164440 TXLNB 289635 sc-eQTL 4.91e-01 0.0656 0.095 0.301 B_Memory LOneK1K
ENSG00000164442 CITED2 206985 sc-eQTL 5.16e-01 -0.0524 0.0807 0.301 B_Memory LOneK1K
ENSG00000226571 AL592429.2 310271 sc-eQTL 2.59e-01 0.106 0.0936 0.301 B_Memory LOneK1K
ENSG00000024862 CCDC28A 808124 sc-eQTL 9.97e-01 0.000343 0.0843 0.301 B_Naive LOneK1K
ENSG00000112406 HECA 446553 sc-eQTL 3.46e-02 0.166 0.078 0.301 B_Naive LOneK1K
ENSG00000135597 REPS1 593372 sc-eQTL 1.18e-01 0.105 0.0668 0.301 B_Naive LOneK1K
ENSG00000146386 ABRACL 552888 sc-eQTL 1.75e-01 0.0639 0.0469 0.301 B_Naive LOneK1K
ENSG00000164440 TXLNB 289635 sc-eQTL 9.44e-01 -0.00692 0.0987 0.301 B_Naive LOneK1K
ENSG00000164442 CITED2 206985 sc-eQTL 4.58e-01 -0.0532 0.0716 0.301 B_Naive LOneK1K
ENSG00000226571 AL592429.2 310271 sc-eQTL 3.12e-01 -0.0852 0.084 0.301 B_Naive LOneK1K
ENSG00000024862 CCDC28A 808124 sc-eQTL 8.19e-01 -0.0153 0.0668 0.301 CD14_Mono LOneK1K
ENSG00000112406 HECA 446553 sc-eQTL 9.05e-01 0.00714 0.0599 0.301 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 889062 sc-eQTL 2.97e-02 0.19 0.0866 0.301 CD14_Mono LOneK1K
ENSG00000135597 REPS1 593372 sc-eQTL 7.79e-01 0.0202 0.072 0.301 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 552888 sc-eQTL 4.81e-01 -0.0452 0.064 0.301 CD14_Mono LOneK1K
ENSG00000164442 CITED2 206985 sc-eQTL 1.66e-01 -0.097 0.0698 0.301 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 889085 sc-eQTL 4.25e-01 -0.075 0.0938 0.301 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 808124 sc-eQTL 5.90e-01 -0.05 0.0927 0.3 CD16_Mono LOneK1K
ENSG00000112406 HECA 446553 sc-eQTL 2.62e-01 0.0888 0.0789 0.3 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 889062 sc-eQTL 3.93e-02 0.181 0.0872 0.3 CD16_Mono LOneK1K
ENSG00000135597 REPS1 593372 sc-eQTL 9.58e-01 0.0029 0.0548 0.3 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 552888 sc-eQTL 4.95e-01 -0.0548 0.0802 0.3 CD16_Mono LOneK1K
ENSG00000164442 CITED2 206985 sc-eQTL 1.81e-01 -0.0924 0.0688 0.3 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 889085 sc-eQTL 9.00e-01 0.0123 0.0973 0.3 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 808124 sc-eQTL 2.72e-02 0.189 0.0848 0.3 NK_CD56dim LOneK1K
ENSG00000112406 HECA 446553 sc-eQTL 3.15e-01 0.0735 0.073 0.3 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 593372 sc-eQTL 4.46e-01 0.0545 0.0714 0.3 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 552888 sc-eQTL 9.82e-01 0.00101 0.0461 0.3 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 206985 sc-eQTL 9.62e-01 0.00314 0.0667 0.3 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000164442 CITED2 206985 eQTL 0.00687 -0.0668 0.0246 0.00241 0.0 0.274

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000164442 CITED2 206985 5.61e-06 5.78e-06 7.85e-07 4.02e-06 1.12e-06 1.53e-06 6.01e-06 9.6e-07 4.59e-06 2.92e-06 7.6e-06 3.37e-06 7.67e-06 2.02e-06 1.21e-06 3.81e-06 1.92e-06 3.85e-06 1.45e-06 1.02e-06 2.81e-06 5.39e-06 4.62e-06 1.48e-06 9.03e-06 1.74e-06 2.24e-06 1.84e-06 4.47e-06 4.07e-06 2.64e-06 4.31e-07 7.51e-07 1.65e-06 2.4e-06 9.79e-07 1.07e-06 4.58e-07 9.45e-07 4.27e-07 6.15e-07 8.21e-06 4.37e-07 1.52e-07 3.58e-07 1.08e-06 1.13e-06 5.21e-07 3.24e-07