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Genes within 1Mb (chr6:139563951:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 790442 sc-eQTL 3.33e-01 0.0775 0.0799 0.697 B L1
ENSG00000112406 HECA 428871 sc-eQTL 5.64e-03 -0.214 0.0765 0.697 B L1
ENSG00000135597 REPS1 575690 sc-eQTL 2.05e-01 0.0871 0.0686 0.697 B L1
ENSG00000146386 ABRACL 535206 sc-eQTL 7.61e-01 0.0123 0.0404 0.697 B L1
ENSG00000164440 TXLNB 271953 sc-eQTL 4.68e-01 -0.072 0.099 0.697 B L1
ENSG00000164442 CITED2 189303 sc-eQTL 8.14e-01 -0.0147 0.0624 0.697 B L1
ENSG00000226571 AL592429.2 292589 sc-eQTL 2.52e-01 0.0794 0.0692 0.697 B L1
ENSG00000024862 CCDC28A 790442 sc-eQTL 4.95e-02 0.178 0.0901 0.697 CD4T L1
ENSG00000112406 HECA 428871 sc-eQTL 2.24e-01 -0.0921 0.0755 0.697 CD4T L1
ENSG00000135597 REPS1 575690 sc-eQTL 8.83e-01 -0.00875 0.0596 0.697 CD4T L1
ENSG00000146386 ABRACL 535206 sc-eQTL 6.36e-01 -0.0207 0.0437 0.697 CD4T L1
ENSG00000164442 CITED2 189303 sc-eQTL 1.36e-01 0.111 0.0742 0.697 CD4T L1
ENSG00000231329 AL031772.1 324298 sc-eQTL 3.99e-01 -0.062 0.0734 0.697 CD4T L1
ENSG00000024862 CCDC28A 790442 sc-eQTL 5.52e-02 0.189 0.0982 0.697 CD8T L1
ENSG00000112406 HECA 428871 sc-eQTL 2.29e-01 -0.0852 0.0706 0.697 CD8T L1
ENSG00000135597 REPS1 575690 sc-eQTL 5.57e-02 0.127 0.0661 0.697 CD8T L1
ENSG00000146386 ABRACL 535206 sc-eQTL 1.27e-01 -0.0579 0.0378 0.697 CD8T L1
ENSG00000164442 CITED2 189303 sc-eQTL 3.07e-01 0.0737 0.0719 0.697 CD8T L1
ENSG00000231329 AL031772.1 324298 sc-eQTL 5.02e-01 -0.0588 0.0875 0.697 CD8T L1
ENSG00000024862 CCDC28A 790442 sc-eQTL 6.12e-01 -0.051 0.1 0.687 DC L1
ENSG00000112406 HECA 428871 sc-eQTL 6.17e-02 -0.154 0.0821 0.687 DC L1
ENSG00000135540 NHSL1 871380 sc-eQTL 7.54e-01 0.0289 0.0921 0.687 DC L1
ENSG00000135597 REPS1 575690 sc-eQTL 5.47e-01 -0.0492 0.0814 0.687 DC L1
ENSG00000146386 ABRACL 535206 sc-eQTL 8.11e-01 -0.0191 0.0798 0.687 DC L1
ENSG00000164442 CITED2 189303 sc-eQTL 2.96e-01 -0.0989 0.0944 0.687 DC L1
ENSG00000225177 AL590617.2 871403 sc-eQTL 5.33e-02 0.185 0.0954 0.687 DC L1
ENSG00000024862 CCDC28A 790442 sc-eQTL 3.07e-02 0.156 0.0718 0.697 Mono L1
ENSG00000112406 HECA 428871 sc-eQTL 1.15e-01 -0.104 0.0658 0.697 Mono L1
ENSG00000135540 NHSL1 871380 sc-eQTL 3.29e-01 0.0925 0.0946 0.697 Mono L1
ENSG00000135597 REPS1 575690 sc-eQTL 2.88e-01 -0.059 0.0554 0.697 Mono L1
ENSG00000146386 ABRACL 535206 sc-eQTL 1.34e-01 0.108 0.0719 0.697 Mono L1
ENSG00000164442 CITED2 189303 sc-eQTL 7.56e-01 0.0238 0.0764 0.697 Mono L1
ENSG00000225177 AL590617.2 871403 sc-eQTL 2.31e-01 0.118 0.0983 0.697 Mono L1
ENSG00000024862 CCDC28A 790442 sc-eQTL 6.16e-01 0.0431 0.0859 0.695 NK L1
ENSG00000112406 HECA 428871 sc-eQTL 7.52e-01 -0.0235 0.0742 0.695 NK L1
ENSG00000135597 REPS1 575690 sc-eQTL 7.22e-01 0.0252 0.0707 0.695 NK L1
ENSG00000146386 ABRACL 535206 sc-eQTL 8.43e-01 -0.0102 0.0516 0.695 NK L1
ENSG00000164442 CITED2 189303 sc-eQTL 4.94e-01 -0.0469 0.0686 0.695 NK L1
ENSG00000024862 CCDC28A 790442 sc-eQTL 9.91e-01 0.00119 0.102 0.697 Other_T L1
ENSG00000112406 HECA 428871 sc-eQTL 7.77e-01 -0.021 0.0741 0.697 Other_T L1
ENSG00000135597 REPS1 575690 sc-eQTL 5.21e-01 0.0511 0.0796 0.697 Other_T L1
ENSG00000146386 ABRACL 535206 sc-eQTL 3.05e-01 -0.0535 0.052 0.697 Other_T L1
ENSG00000164442 CITED2 189303 sc-eQTL 4.23e-01 -0.049 0.061 0.697 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 790442 sc-eQTL 3.59e-01 0.104 0.113 0.704 B_Activated L2
ENSG00000112406 HECA 428871 sc-eQTL 7.62e-01 -0.0328 0.108 0.704 B_Activated L2
ENSG00000135597 REPS1 575690 sc-eQTL 9.25e-02 0.189 0.112 0.704 B_Activated L2
ENSG00000146386 ABRACL 535206 sc-eQTL 5.01e-01 0.0688 0.102 0.704 B_Activated L2
ENSG00000164440 TXLNB 271953 sc-eQTL 6.85e-01 0.0356 0.0875 0.704 B_Activated L2
ENSG00000164442 CITED2 189303 sc-eQTL 1.87e-01 -0.145 0.11 0.704 B_Activated L2
ENSG00000226571 AL592429.2 292589 sc-eQTL 6.55e-01 -0.0493 0.11 0.704 B_Activated L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 4.90e-02 0.194 0.0982 0.695 B_Intermediate L2
ENSG00000112406 HECA 428871 sc-eQTL 4.96e-02 -0.168 0.0851 0.695 B_Intermediate L2
ENSG00000135597 REPS1 575690 sc-eQTL 5.95e-01 -0.0493 0.0926 0.695 B_Intermediate L2
ENSG00000146386 ABRACL 535206 sc-eQTL 4.81e-01 -0.0556 0.0788 0.695 B_Intermediate L2
ENSG00000164440 TXLNB 271953 sc-eQTL 5.64e-01 -0.0557 0.0965 0.695 B_Intermediate L2
ENSG00000164442 CITED2 189303 sc-eQTL 8.83e-01 -0.0131 0.0889 0.695 B_Intermediate L2
ENSG00000226571 AL592429.2 292589 sc-eQTL 1.82e-02 0.226 0.095 0.695 B_Intermediate L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 2.47e-01 0.117 0.101 0.698 B_Memory L2
ENSG00000112406 HECA 428871 sc-eQTL 3.55e-01 -0.0806 0.087 0.698 B_Memory L2
ENSG00000135597 REPS1 575690 sc-eQTL 1.73e-01 0.129 0.0941 0.698 B_Memory L2
ENSG00000146386 ABRACL 535206 sc-eQTL 5.84e-01 -0.041 0.0747 0.698 B_Memory L2
ENSG00000164440 TXLNB 271953 sc-eQTL 3.74e-01 -0.0848 0.0952 0.698 B_Memory L2
ENSG00000164442 CITED2 189303 sc-eQTL 4.69e-01 -0.0636 0.0875 0.698 B_Memory L2
ENSG00000226571 AL592429.2 292589 sc-eQTL 7.81e-01 -0.03 0.108 0.698 B_Memory L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 5.77e-01 -0.053 0.0949 0.697 B_Naive1 L2
ENSG00000112406 HECA 428871 sc-eQTL 9.47e-02 -0.138 0.0823 0.697 B_Naive1 L2
ENSG00000135597 REPS1 575690 sc-eQTL 2.09e-01 0.0962 0.0763 0.697 B_Naive1 L2
ENSG00000146386 ABRACL 535206 sc-eQTL 7.12e-01 -0.0198 0.0536 0.697 B_Naive1 L2
ENSG00000164440 TXLNB 271953 sc-eQTL 2.89e-01 -0.106 0.1 0.697 B_Naive1 L2
ENSG00000164442 CITED2 189303 sc-eQTL 7.36e-01 0.0247 0.073 0.697 B_Naive1 L2
ENSG00000226571 AL592429.2 292589 sc-eQTL 8.54e-01 0.0177 0.0958 0.697 B_Naive1 L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 4.40e-01 -0.0724 0.0936 0.697 B_Naive2 L2
ENSG00000112406 HECA 428871 sc-eQTL 7.76e-02 -0.155 0.0875 0.697 B_Naive2 L2
ENSG00000135597 REPS1 575690 sc-eQTL 8.26e-01 0.0185 0.0842 0.697 B_Naive2 L2
ENSG00000146386 ABRACL 535206 sc-eQTL 3.00e-01 0.0641 0.0618 0.697 B_Naive2 L2
ENSG00000164440 TXLNB 271953 sc-eQTL 7.52e-01 0.031 0.0981 0.697 B_Naive2 L2
ENSG00000164442 CITED2 189303 sc-eQTL 9.16e-01 -0.0106 0.1 0.697 B_Naive2 L2
ENSG00000226571 AL592429.2 292589 sc-eQTL 3.11e-01 0.093 0.0917 0.697 B_Naive2 L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 1.35e-01 0.144 0.0958 0.695 CD4_CTL L2
ENSG00000112406 HECA 428871 sc-eQTL 5.53e-01 -0.0577 0.0972 0.695 CD4_CTL L2
ENSG00000135597 REPS1 575690 sc-eQTL 5.67e-01 -0.0541 0.0944 0.695 CD4_CTL L2
ENSG00000146386 ABRACL 535206 sc-eQTL 9.79e-01 -0.00227 0.0861 0.695 CD4_CTL L2
ENSG00000164442 CITED2 189303 sc-eQTL 2.10e-01 -0.108 0.0862 0.695 CD4_CTL L2
ENSG00000231329 AL031772.1 324298 sc-eQTL 7.00e-01 -0.0344 0.0892 0.695 CD4_CTL L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 2.09e-01 0.119 0.0947 0.697 CD4_Naive L2
ENSG00000112406 HECA 428871 sc-eQTL 1.77e-01 -0.0997 0.0735 0.697 CD4_Naive L2
ENSG00000135597 REPS1 575690 sc-eQTL 5.92e-01 -0.0351 0.0655 0.697 CD4_Naive L2
ENSG00000146386 ABRACL 535206 sc-eQTL 9.98e-01 9.95e-05 0.0441 0.697 CD4_Naive L2
ENSG00000164442 CITED2 189303 sc-eQTL 7.74e-02 0.132 0.0744 0.697 CD4_Naive L2
ENSG00000231329 AL031772.1 324298 sc-eQTL 4.05e-01 -0.0632 0.0756 0.697 CD4_Naive L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 9.32e-04 0.299 0.0891 0.697 CD4_TCM L2
ENSG00000112406 HECA 428871 sc-eQTL 9.20e-01 0.00739 0.0731 0.697 CD4_TCM L2
ENSG00000135597 REPS1 575690 sc-eQTL 1.95e-01 0.0898 0.0691 0.697 CD4_TCM L2
ENSG00000146386 ABRACL 535206 sc-eQTL 7.62e-01 -0.0162 0.0533 0.697 CD4_TCM L2
ENSG00000164442 CITED2 189303 sc-eQTL 8.86e-01 0.0114 0.0793 0.697 CD4_TCM L2
ENSG00000231329 AL031772.1 324298 sc-eQTL 7.77e-01 0.0243 0.0856 0.697 CD4_TCM L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 4.90e-01 0.0716 0.104 0.697 CD4_TEM L2
ENSG00000112406 HECA 428871 sc-eQTL 7.00e-01 0.0311 0.0807 0.697 CD4_TEM L2
ENSG00000135597 REPS1 575690 sc-eQTL 1.55e-01 0.125 0.0875 0.697 CD4_TEM L2
ENSG00000146386 ABRACL 535206 sc-eQTL 2.97e-01 -0.0654 0.0625 0.697 CD4_TEM L2
ENSG00000164442 CITED2 189303 sc-eQTL 1.00e-01 -0.135 0.0818 0.697 CD4_TEM L2
ENSG00000231329 AL031772.1 324298 sc-eQTL 4.48e-01 -0.0653 0.086 0.697 CD4_TEM L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 2.67e-01 0.118 0.106 0.697 CD8_CTL L2
ENSG00000112406 HECA 428871 sc-eQTL 4.83e-01 -0.0546 0.0776 0.697 CD8_CTL L2
ENSG00000135597 REPS1 575690 sc-eQTL 3.98e-01 0.0703 0.083 0.697 CD8_CTL L2
ENSG00000146386 ABRACL 535206 sc-eQTL 9.55e-01 0.00384 0.0673 0.697 CD8_CTL L2
ENSG00000164442 CITED2 189303 sc-eQTL 2.00e-01 -0.1 0.078 0.697 CD8_CTL L2
ENSG00000231329 AL031772.1 324298 sc-eQTL 4.15e-01 0.0766 0.0938 0.697 CD8_CTL L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 2.65e-02 0.223 0.1 0.697 CD8_Naive L2
ENSG00000112406 HECA 428871 sc-eQTL 7.00e-01 -0.0301 0.0781 0.697 CD8_Naive L2
ENSG00000135597 REPS1 575690 sc-eQTL 7.53e-02 0.139 0.0777 0.697 CD8_Naive L2
ENSG00000146386 ABRACL 535206 sc-eQTL 4.11e-01 -0.0338 0.041 0.697 CD8_Naive L2
ENSG00000164442 CITED2 189303 sc-eQTL 2.05e-01 0.105 0.0827 0.697 CD8_Naive L2
ENSG00000231329 AL031772.1 324298 sc-eQTL 1.75e-01 -0.129 0.0946 0.697 CD8_Naive L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 5.62e-02 -0.216 0.112 0.697 CD8_TCM L2
ENSG00000112406 HECA 428871 sc-eQTL 5.47e-01 -0.05 0.0829 0.697 CD8_TCM L2
ENSG00000135597 REPS1 575690 sc-eQTL 7.90e-01 0.023 0.0862 0.697 CD8_TCM L2
ENSG00000146386 ABRACL 535206 sc-eQTL 9.72e-01 0.00301 0.0859 0.697 CD8_TCM L2
ENSG00000164442 CITED2 189303 sc-eQTL 7.46e-01 -0.0286 0.0883 0.697 CD8_TCM L2
ENSG00000231329 AL031772.1 324298 sc-eQTL 3.61e-01 -0.0852 0.093 0.697 CD8_TCM L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 4.20e-01 0.0832 0.103 0.687 CD8_TEM L2
ENSG00000112406 HECA 428871 sc-eQTL 6.52e-01 0.0435 0.0965 0.687 CD8_TEM L2
ENSG00000135597 REPS1 575690 sc-eQTL 2.17e-01 0.124 0.1 0.687 CD8_TEM L2
ENSG00000146386 ABRACL 535206 sc-eQTL 4.32e-01 -0.0609 0.0773 0.687 CD8_TEM L2
ENSG00000164442 CITED2 189303 sc-eQTL 2.85e-01 -0.0899 0.0839 0.687 CD8_TEM L2
ENSG00000231329 AL031772.1 324298 sc-eQTL 4.75e-01 -0.0684 0.0956 0.687 CD8_TEM L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 3.00e-01 0.115 0.111 0.697 MAIT L2
ENSG00000112406 HECA 428871 sc-eQTL 7.56e-01 -0.0262 0.0843 0.697 MAIT L2
ENSG00000135597 REPS1 575690 sc-eQTL 4.66e-02 0.18 0.0899 0.697 MAIT L2
ENSG00000146386 ABRACL 535206 sc-eQTL 5.92e-01 -0.0358 0.0667 0.697 MAIT L2
ENSG00000164442 CITED2 189303 sc-eQTL 2.81e-01 -0.0847 0.0784 0.697 MAIT L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 2.48e-01 0.117 0.101 0.698 NK_CD56bright L2
ENSG00000112406 HECA 428871 sc-eQTL 5.32e-01 -0.0576 0.092 0.698 NK_CD56bright L2
ENSG00000135597 REPS1 575690 sc-eQTL 5.62e-01 0.0499 0.0858 0.698 NK_CD56bright L2
ENSG00000146386 ABRACL 535206 sc-eQTL 8.43e-01 -0.0157 0.0791 0.698 NK_CD56bright L2
ENSG00000164442 CITED2 189303 sc-eQTL 4.22e-01 -0.0681 0.0847 0.698 NK_CD56bright L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 7.46e-01 0.0303 0.0935 0.694 NK_CD56dim L2
ENSG00000112406 HECA 428871 sc-eQTL 3.72e-01 -0.0718 0.0803 0.694 NK_CD56dim L2
ENSG00000135597 REPS1 575690 sc-eQTL 7.32e-01 0.0261 0.0762 0.694 NK_CD56dim L2
ENSG00000146386 ABRACL 535206 sc-eQTL 8.43e-01 0.0102 0.0516 0.694 NK_CD56dim L2
ENSG00000164442 CITED2 189303 sc-eQTL 6.20e-01 -0.0342 0.0688 0.694 NK_CD56dim L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 2.65e-01 0.12 0.107 0.701 NK_HLA L2
ENSG00000112406 HECA 428871 sc-eQTL 9.97e-01 0.000418 0.101 0.701 NK_HLA L2
ENSG00000135597 REPS1 575690 sc-eQTL 2.41e-01 -0.116 0.0989 0.701 NK_HLA L2
ENSG00000146386 ABRACL 535206 sc-eQTL 5.44e-01 -0.0496 0.0815 0.701 NK_HLA L2
ENSG00000164442 CITED2 189303 sc-eQTL 6.75e-01 0.0366 0.0871 0.701 NK_HLA L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 7.13e-01 0.0355 0.0964 0.694 NK_cytokine L2
ENSG00000112406 HECA 428871 sc-eQTL 6.34e-01 0.0396 0.083 0.694 NK_cytokine L2
ENSG00000135597 REPS1 575690 sc-eQTL 6.90e-01 0.0343 0.0857 0.694 NK_cytokine L2
ENSG00000146386 ABRACL 535206 sc-eQTL 5.91e-01 0.0297 0.0552 0.694 NK_cytokine L2
ENSG00000164442 CITED2 189303 sc-eQTL 7.77e-01 -0.0205 0.0721 0.694 NK_cytokine L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 5.94e-03 0.339 0.121 0.715 PB L2
ENSG00000112406 HECA 428871 sc-eQTL 5.90e-01 -0.0735 0.136 0.715 PB L2
ENSG00000135597 REPS1 575690 sc-eQTL 8.25e-01 -0.0268 0.121 0.715 PB L2
ENSG00000146386 ABRACL 535206 sc-eQTL 8.70e-01 0.0139 0.0846 0.715 PB L2
ENSG00000164440 TXLNB 271953 sc-eQTL 4.77e-01 0.088 0.123 0.715 PB L2
ENSG00000164442 CITED2 189303 sc-eQTL 9.43e-01 0.0067 0.093 0.715 PB L2
ENSG00000226571 AL592429.2 292589 sc-eQTL 8.81e-01 -0.0187 0.125 0.715 PB L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 8.24e-01 0.024 0.108 0.693 Pro_T L2
ENSG00000112406 HECA 428871 sc-eQTL 3.18e-01 0.0845 0.0845 0.693 Pro_T L2
ENSG00000135597 REPS1 575690 sc-eQTL 4.37e-01 -0.0775 0.0996 0.693 Pro_T L2
ENSG00000146386 ABRACL 535206 sc-eQTL 2.68e-01 0.0713 0.0641 0.693 Pro_T L2
ENSG00000164442 CITED2 189303 sc-eQTL 8.91e-01 -0.0105 0.0766 0.693 Pro_T L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 9.54e-01 0.00569 0.0986 0.697 Treg L2
ENSG00000112406 HECA 428871 sc-eQTL 6.52e-02 -0.151 0.0812 0.697 Treg L2
ENSG00000135597 REPS1 575690 sc-eQTL 5.56e-01 -0.05 0.0847 0.697 Treg L2
ENSG00000146386 ABRACL 535206 sc-eQTL 4.99e-01 0.0488 0.0721 0.697 Treg L2
ENSG00000164442 CITED2 189303 sc-eQTL 6.56e-01 -0.036 0.0806 0.697 Treg L2
ENSG00000231329 AL031772.1 324298 sc-eQTL 9.21e-01 0.00915 0.0922 0.697 Treg L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 4.16e-01 -0.0849 0.104 0.7 cDC L2
ENSG00000112406 HECA 428871 sc-eQTL 3.76e-01 -0.0879 0.099 0.7 cDC L2
ENSG00000135540 NHSL1 871380 sc-eQTL 6.74e-01 -0.0409 0.097 0.7 cDC L2
ENSG00000135597 REPS1 575690 sc-eQTL 2.17e-01 -0.138 0.111 0.7 cDC L2
ENSG00000146386 ABRACL 535206 sc-eQTL 2.84e-01 -0.0981 0.0912 0.7 cDC L2
ENSG00000164442 CITED2 189303 sc-eQTL 6.26e-01 0.0473 0.097 0.7 cDC L2
ENSG00000225177 AL590617.2 871403 sc-eQTL 8.53e-02 0.184 0.106 0.7 cDC L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 1.81e-02 0.187 0.0786 0.697 cMono_IL1B L2
ENSG00000112406 HECA 428871 sc-eQTL 2.91e-01 -0.0695 0.0656 0.697 cMono_IL1B L2
ENSG00000135540 NHSL1 871380 sc-eQTL 7.17e-01 0.0348 0.0958 0.697 cMono_IL1B L2
ENSG00000135597 REPS1 575690 sc-eQTL 9.26e-01 -0.0079 0.0855 0.697 cMono_IL1B L2
ENSG00000146386 ABRACL 535206 sc-eQTL 2.65e-01 0.0802 0.0717 0.697 cMono_IL1B L2
ENSG00000164442 CITED2 189303 sc-eQTL 6.90e-01 0.03 0.0752 0.697 cMono_IL1B L2
ENSG00000225177 AL590617.2 871403 sc-eQTL 9.02e-01 0.0124 0.1 0.697 cMono_IL1B L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 6.01e-01 0.0474 0.0905 0.697 cMono_S100A L2
ENSG00000112406 HECA 428871 sc-eQTL 1.28e-01 -0.116 0.0761 0.697 cMono_S100A L2
ENSG00000135540 NHSL1 871380 sc-eQTL 2.18e-02 0.221 0.0958 0.697 cMono_S100A L2
ENSG00000135597 REPS1 575690 sc-eQTL 6.03e-01 -0.0477 0.0917 0.697 cMono_S100A L2
ENSG00000146386 ABRACL 535206 sc-eQTL 4.95e-01 0.0545 0.0797 0.697 cMono_S100A L2
ENSG00000164442 CITED2 189303 sc-eQTL 8.82e-01 -0.0117 0.079 0.697 cMono_S100A L2
ENSG00000225177 AL590617.2 871403 sc-eQTL 1.44e-01 0.155 0.106 0.697 cMono_S100A L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 3.74e-01 0.107 0.12 0.703 gdT L2
ENSG00000112406 HECA 428871 sc-eQTL 4.77e-01 0.0811 0.114 0.703 gdT L2
ENSG00000135597 REPS1 575690 sc-eQTL 4.79e-01 0.0836 0.118 0.703 gdT L2
ENSG00000146386 ABRACL 535206 sc-eQTL 3.19e-02 -0.189 0.0873 0.703 gdT L2
ENSG00000164442 CITED2 189303 sc-eQTL 5.53e-01 -0.0607 0.102 0.703 gdT L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 8.08e-01 -0.0263 0.108 0.702 intMono L2
ENSG00000112406 HECA 428871 sc-eQTL 1.68e-01 0.122 0.0885 0.702 intMono L2
ENSG00000135540 NHSL1 871380 sc-eQTL 2.18e-01 -0.121 0.0977 0.702 intMono L2
ENSG00000135597 REPS1 575690 sc-eQTL 9.91e-01 -0.00115 0.101 0.702 intMono L2
ENSG00000146386 ABRACL 535206 sc-eQTL 9.03e-01 0.0112 0.0924 0.702 intMono L2
ENSG00000164442 CITED2 189303 sc-eQTL 2.59e-01 -0.101 0.0895 0.702 intMono L2
ENSG00000225177 AL590617.2 871403 sc-eQTL 9.45e-01 -0.00756 0.11 0.702 intMono L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 1.60e-01 0.138 0.0975 0.695 ncMono L2
ENSG00000112406 HECA 428871 sc-eQTL 5.71e-01 -0.0508 0.0895 0.695 ncMono L2
ENSG00000135540 NHSL1 871380 sc-eQTL 1.31e-01 0.142 0.0936 0.695 ncMono L2
ENSG00000135597 REPS1 575690 sc-eQTL 1.15e-01 -0.112 0.0705 0.695 ncMono L2
ENSG00000146386 ABRACL 535206 sc-eQTL 3.13e-01 0.0862 0.0853 0.695 ncMono L2
ENSG00000164442 CITED2 189303 sc-eQTL 9.89e-01 0.00103 0.0725 0.695 ncMono L2
ENSG00000225177 AL590617.2 871403 sc-eQTL 8.30e-01 0.0225 0.105 0.695 ncMono L2
ENSG00000024862 CCDC28A 790442 sc-eQTL 6.68e-02 0.203 0.11 0.692 pDC L2
ENSG00000112406 HECA 428871 sc-eQTL 2.34e-01 -0.112 0.0938 0.692 pDC L2
ENSG00000135540 NHSL1 871380 sc-eQTL 2.84e-01 0.0923 0.0858 0.692 pDC L2
ENSG00000135597 REPS1 575690 sc-eQTL 7.52e-01 -0.0276 0.0872 0.692 pDC L2
ENSG00000146386 ABRACL 535206 sc-eQTL 9.37e-01 -0.00749 0.0953 0.692 pDC L2
ENSG00000164442 CITED2 189303 sc-eQTL 8.03e-02 -0.195 0.111 0.692 pDC L2
ENSG00000225177 AL590617.2 871403 sc-eQTL 4.05e-01 0.0721 0.0863 0.692 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 790442 sc-eQTL 1.84e-02 0.223 0.0941 0.697 B_Memory LOneK1K
ENSG00000112406 HECA 428871 sc-eQTL 4.83e-02 -0.167 0.084 0.697 B_Memory LOneK1K
ENSG00000135597 REPS1 575690 sc-eQTL 8.44e-01 0.0174 0.0879 0.697 B_Memory LOneK1K
ENSG00000146386 ABRACL 535206 sc-eQTL 4.43e-01 -0.0468 0.0608 0.697 B_Memory LOneK1K
ENSG00000164440 TXLNB 271953 sc-eQTL 1.93e-01 -0.131 0.1 0.697 B_Memory LOneK1K
ENSG00000164442 CITED2 189303 sc-eQTL 5.33e-01 -0.0534 0.0855 0.697 B_Memory LOneK1K
ENSG00000226571 AL592429.2 292589 sc-eQTL 3.11e-01 0.101 0.0993 0.697 B_Memory LOneK1K
ENSG00000024862 CCDC28A 790442 sc-eQTL 3.39e-01 -0.085 0.0886 0.697 B_Naive LOneK1K
ENSG00000112406 HECA 428871 sc-eQTL 3.06e-02 -0.179 0.0821 0.697 B_Naive LOneK1K
ENSG00000135597 REPS1 575690 sc-eQTL 1.39e-01 0.105 0.0704 0.697 B_Naive LOneK1K
ENSG00000146386 ABRACL 535206 sc-eQTL 7.05e-01 0.0188 0.0496 0.697 B_Naive LOneK1K
ENSG00000164440 TXLNB 271953 sc-eQTL 4.82e-01 -0.0731 0.104 0.697 B_Naive LOneK1K
ENSG00000164442 CITED2 189303 sc-eQTL 9.20e-01 0.00764 0.0755 0.697 B_Naive LOneK1K
ENSG00000226571 AL592429.2 292589 sc-eQTL 4.05e-01 0.074 0.0886 0.697 B_Naive LOneK1K
ENSG00000024862 CCDC28A 790442 sc-eQTL 2.63e-02 0.162 0.0724 0.697 CD14_Mono LOneK1K
ENSG00000112406 HECA 428871 sc-eQTL 1.03e-01 -0.107 0.0653 0.697 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 871380 sc-eQTL 8.97e-02 0.163 0.0954 0.697 CD14_Mono LOneK1K
ENSG00000135597 REPS1 575690 sc-eQTL 7.32e-01 -0.027 0.079 0.697 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 535206 sc-eQTL 2.94e-01 0.0737 0.0701 0.697 CD14_Mono LOneK1K
ENSG00000164442 CITED2 189303 sc-eQTL 5.91e-01 0.0414 0.0769 0.697 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 871403 sc-eQTL 3.36e-01 0.0992 0.103 0.697 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 790442 sc-eQTL 6.63e-01 0.044 0.101 0.694 CD16_Mono LOneK1K
ENSG00000112406 HECA 428871 sc-eQTL 5.76e-01 -0.0483 0.0861 0.694 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 871380 sc-eQTL 8.94e-01 -0.0128 0.0958 0.694 CD16_Mono LOneK1K
ENSG00000135597 REPS1 575690 sc-eQTL 1.67e-01 -0.0823 0.0594 0.694 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 535206 sc-eQTL 4.71e-01 0.063 0.0872 0.694 CD16_Mono LOneK1K
ENSG00000164442 CITED2 189303 sc-eQTL 8.69e-01 -0.0124 0.0752 0.694 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 871403 sc-eQTL 5.84e-01 0.058 0.106 0.694 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 790442 sc-eQTL 6.81e-01 0.0369 0.0894 0.694 NK_CD56dim LOneK1K
ENSG00000112406 HECA 428871 sc-eQTL 7.42e-01 -0.0251 0.0763 0.694 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 575690 sc-eQTL 8.92e-01 0.0102 0.0746 0.694 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 535206 sc-eQTL 7.89e-01 0.0129 0.0481 0.694 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 189303 sc-eQTL 4.58e-01 -0.0517 0.0695 0.694 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000135540 NHSL1 871380 eQTL 0.0145 0.0629 0.0257 0.0 0.0 0.292

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000135540 NHSL1 871380 3.02e-07 2.3e-07 7.45e-08 2.62e-07 1.07e-07 1.08e-07 2.4e-07 5.78e-08 1.98e-07 1.15e-07 2.38e-07 2.04e-07 2.29e-07 8.85e-08 1.45e-07 9.6e-08 4.18e-08 2.43e-07 9.69e-08 6.03e-08 1.18e-07 1.81e-07 1.62e-07 3.68e-08 2.59e-07 1.56e-07 1.33e-07 1.48e-07 1.32e-07 1.33e-07 1.35e-07 2.99e-08 3.43e-08 1.17e-07 7.44e-08 5.05e-08 5.76e-08 8.89e-08 6.62e-08 5.96e-08 4.64e-08 1.6e-07 3.59e-08 7.2e-09 3.32e-08 9.12e-09 9.96e-08 0.0 4.94e-08