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Genes within 1Mb (chr6:139562039:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 788530 sc-eQTL 3.76e-01 0.0711 0.0801 0.694 B L1
ENSG00000112406 HECA 426959 sc-eQTL 4.90e-03 -0.218 0.0766 0.694 B L1
ENSG00000135597 REPS1 573778 sc-eQTL 1.44e-01 0.101 0.0686 0.694 B L1
ENSG00000146386 ABRACL 533294 sc-eQTL 7.16e-01 0.0148 0.0405 0.694 B L1
ENSG00000164440 TXLNB 270041 sc-eQTL 5.72e-01 -0.0561 0.0992 0.694 B L1
ENSG00000164442 CITED2 187391 sc-eQTL 8.28e-01 -0.0136 0.0625 0.694 B L1
ENSG00000226571 AL592429.2 290677 sc-eQTL 2.53e-01 0.0795 0.0693 0.694 B L1
ENSG00000024862 CCDC28A 788530 sc-eQTL 4.08e-02 0.186 0.0903 0.694 CD4T L1
ENSG00000112406 HECA 426959 sc-eQTL 2.24e-01 -0.0925 0.0758 0.694 CD4T L1
ENSG00000135597 REPS1 573778 sc-eQTL 9.41e-01 0.0044 0.0598 0.694 CD4T L1
ENSG00000146386 ABRACL 533294 sc-eQTL 6.24e-01 -0.0215 0.0438 0.694 CD4T L1
ENSG00000164442 CITED2 187391 sc-eQTL 8.38e-02 0.129 0.0743 0.694 CD4T L1
ENSG00000231329 AL031772.1 322386 sc-eQTL 4.09e-01 -0.061 0.0737 0.694 CD4T L1
ENSG00000024862 CCDC28A 788530 sc-eQTL 4.50e-02 0.198 0.0983 0.694 CD8T L1
ENSG00000112406 HECA 426959 sc-eQTL 2.14e-01 -0.0883 0.0708 0.694 CD8T L1
ENSG00000135597 REPS1 573778 sc-eQTL 5.45e-02 0.128 0.0663 0.694 CD8T L1
ENSG00000146386 ABRACL 533294 sc-eQTL 1.27e-01 -0.0579 0.0378 0.694 CD8T L1
ENSG00000164442 CITED2 187391 sc-eQTL 2.81e-01 0.0779 0.072 0.694 CD8T L1
ENSG00000231329 AL031772.1 322386 sc-eQTL 5.05e-01 -0.0585 0.0877 0.694 CD8T L1
ENSG00000024862 CCDC28A 788530 sc-eQTL 6.25e-01 -0.0492 0.1 0.685 DC L1
ENSG00000112406 HECA 426959 sc-eQTL 6.44e-02 -0.153 0.0821 0.685 DC L1
ENSG00000135540 NHSL1 869468 sc-eQTL 8.14e-01 0.0217 0.0921 0.685 DC L1
ENSG00000135597 REPS1 573778 sc-eQTL 7.22e-01 -0.029 0.0815 0.685 DC L1
ENSG00000146386 ABRACL 533294 sc-eQTL 9.67e-01 -0.00329 0.0798 0.685 DC L1
ENSG00000164442 CITED2 187391 sc-eQTL 2.42e-01 -0.111 0.0944 0.685 DC L1
ENSG00000225177 AL590617.2 869491 sc-eQTL 6.66e-02 0.176 0.0955 0.685 DC L1
ENSG00000024862 CCDC28A 788530 sc-eQTL 2.65e-02 0.16 0.0716 0.694 Mono L1
ENSG00000112406 HECA 426959 sc-eQTL 1.10e-01 -0.106 0.0657 0.694 Mono L1
ENSG00000135540 NHSL1 869468 sc-eQTL 4.00e-01 0.0797 0.0945 0.694 Mono L1
ENSG00000135597 REPS1 573778 sc-eQTL 2.73e-01 -0.0608 0.0553 0.694 Mono L1
ENSG00000146386 ABRACL 533294 sc-eQTL 1.71e-01 0.0987 0.0718 0.694 Mono L1
ENSG00000164442 CITED2 187391 sc-eQTL 9.15e-01 0.00819 0.0763 0.694 Mono L1
ENSG00000225177 AL590617.2 869491 sc-eQTL 2.07e-01 0.124 0.0981 0.694 Mono L1
ENSG00000024862 CCDC28A 788530 sc-eQTL 5.26e-01 0.0546 0.0858 0.693 NK L1
ENSG00000112406 HECA 426959 sc-eQTL 8.14e-01 -0.0175 0.0742 0.693 NK L1
ENSG00000135597 REPS1 573778 sc-eQTL 7.70e-01 0.0207 0.0707 0.693 NK L1
ENSG00000146386 ABRACL 533294 sc-eQTL 7.62e-01 -0.0157 0.0516 0.693 NK L1
ENSG00000164442 CITED2 187391 sc-eQTL 4.23e-01 -0.055 0.0685 0.693 NK L1
ENSG00000024862 CCDC28A 788530 sc-eQTL 9.16e-01 0.0108 0.103 0.694 Other_T L1
ENSG00000112406 HECA 426959 sc-eQTL 6.32e-01 -0.0356 0.0742 0.694 Other_T L1
ENSG00000135597 REPS1 573778 sc-eQTL 5.61e-01 0.0465 0.0798 0.694 Other_T L1
ENSG00000146386 ABRACL 533294 sc-eQTL 2.96e-01 -0.0546 0.0521 0.694 Other_T L1
ENSG00000164442 CITED2 187391 sc-eQTL 3.82e-01 -0.0535 0.0611 0.694 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 788530 sc-eQTL 2.91e-01 0.119 0.113 0.702 B_Activated L2
ENSG00000112406 HECA 426959 sc-eQTL 7.36e-01 -0.0364 0.108 0.702 B_Activated L2
ENSG00000135597 REPS1 573778 sc-eQTL 6.16e-02 0.21 0.112 0.702 B_Activated L2
ENSG00000146386 ABRACL 533294 sc-eQTL 4.26e-01 0.0814 0.102 0.702 B_Activated L2
ENSG00000164440 TXLNB 270041 sc-eQTL 6.29e-01 0.0423 0.0874 0.702 B_Activated L2
ENSG00000164442 CITED2 187391 sc-eQTL 1.62e-01 -0.154 0.109 0.702 B_Activated L2
ENSG00000226571 AL592429.2 290677 sc-eQTL 4.58e-01 -0.0818 0.11 0.702 B_Activated L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 3.89e-02 0.204 0.0981 0.693 B_Intermediate L2
ENSG00000112406 HECA 426959 sc-eQTL 5.67e-02 -0.163 0.0851 0.693 B_Intermediate L2
ENSG00000135597 REPS1 573778 sc-eQTL 6.74e-01 -0.039 0.0926 0.693 B_Intermediate L2
ENSG00000146386 ABRACL 533294 sc-eQTL 4.79e-01 -0.0559 0.0788 0.693 B_Intermediate L2
ENSG00000164440 TXLNB 270041 sc-eQTL 6.71e-01 -0.0411 0.0966 0.693 B_Intermediate L2
ENSG00000164442 CITED2 187391 sc-eQTL 8.64e-01 -0.0152 0.0889 0.693 B_Intermediate L2
ENSG00000226571 AL592429.2 290677 sc-eQTL 1.29e-02 0.238 0.0948 0.693 B_Intermediate L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 3.11e-01 0.102 0.101 0.696 B_Memory L2
ENSG00000112406 HECA 426959 sc-eQTL 2.67e-01 -0.0967 0.0869 0.696 B_Memory L2
ENSG00000135597 REPS1 573778 sc-eQTL 1.40e-01 0.139 0.094 0.696 B_Memory L2
ENSG00000146386 ABRACL 533294 sc-eQTL 4.49e-01 -0.0567 0.0746 0.696 B_Memory L2
ENSG00000164440 TXLNB 270041 sc-eQTL 3.66e-01 -0.0863 0.0952 0.696 B_Memory L2
ENSG00000164442 CITED2 187391 sc-eQTL 4.36e-01 -0.0683 0.0875 0.696 B_Memory L2
ENSG00000226571 AL592429.2 290677 sc-eQTL 8.38e-01 -0.022 0.108 0.696 B_Memory L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 5.02e-01 -0.0641 0.0952 0.694 B_Naive1 L2
ENSG00000112406 HECA 426959 sc-eQTL 9.43e-02 -0.139 0.0826 0.694 B_Naive1 L2
ENSG00000135597 REPS1 573778 sc-eQTL 1.78e-01 0.104 0.0766 0.694 B_Naive1 L2
ENSG00000146386 ABRACL 533294 sc-eQTL 7.15e-01 -0.0197 0.0538 0.694 B_Naive1 L2
ENSG00000164440 TXLNB 270041 sc-eQTL 2.90e-01 -0.106 0.1 0.694 B_Naive1 L2
ENSG00000164442 CITED2 187391 sc-eQTL 6.43e-01 0.034 0.0732 0.694 B_Naive1 L2
ENSG00000226571 AL592429.2 290677 sc-eQTL 9.34e-01 0.00801 0.0961 0.694 B_Naive1 L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 4.01e-01 -0.0788 0.0936 0.695 B_Naive2 L2
ENSG00000112406 HECA 426959 sc-eQTL 5.57e-02 -0.168 0.0875 0.695 B_Naive2 L2
ENSG00000135597 REPS1 573778 sc-eQTL 8.78e-01 0.0129 0.0842 0.695 B_Naive2 L2
ENSG00000146386 ABRACL 533294 sc-eQTL 2.37e-01 0.0733 0.0618 0.695 B_Naive2 L2
ENSG00000164440 TXLNB 270041 sc-eQTL 6.41e-01 0.0458 0.0981 0.695 B_Naive2 L2
ENSG00000164442 CITED2 187391 sc-eQTL 7.99e-01 -0.0255 0.1 0.695 B_Naive2 L2
ENSG00000226571 AL592429.2 290677 sc-eQTL 3.83e-01 0.0802 0.0918 0.695 B_Naive2 L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 1.14e-01 0.152 0.0961 0.693 CD4_CTL L2
ENSG00000112406 HECA 426959 sc-eQTL 4.92e-01 -0.0671 0.0975 0.693 CD4_CTL L2
ENSG00000135597 REPS1 573778 sc-eQTL 5.81e-01 -0.0524 0.0947 0.693 CD4_CTL L2
ENSG00000146386 ABRACL 533294 sc-eQTL 9.81e-01 -0.00203 0.0864 0.693 CD4_CTL L2
ENSG00000164442 CITED2 187391 sc-eQTL 2.25e-01 -0.105 0.0864 0.693 CD4_CTL L2
ENSG00000231329 AL031772.1 322386 sc-eQTL 7.73e-01 -0.0258 0.0895 0.693 CD4_CTL L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 1.81e-01 0.127 0.0949 0.694 CD4_Naive L2
ENSG00000112406 HECA 426959 sc-eQTL 1.94e-01 -0.0962 0.0738 0.694 CD4_Naive L2
ENSG00000135597 REPS1 573778 sc-eQTL 7.10e-01 -0.0244 0.0657 0.694 CD4_Naive L2
ENSG00000146386 ABRACL 533294 sc-eQTL 9.95e-01 0.000252 0.0442 0.694 CD4_Naive L2
ENSG00000164442 CITED2 187391 sc-eQTL 4.68e-02 0.149 0.0744 0.694 CD4_Naive L2
ENSG00000231329 AL031772.1 322386 sc-eQTL 4.78e-01 -0.0539 0.0759 0.694 CD4_Naive L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 6.82e-04 0.307 0.0891 0.694 CD4_TCM L2
ENSG00000112406 HECA 426959 sc-eQTL 9.32e-01 0.00625 0.0732 0.694 CD4_TCM L2
ENSG00000135597 REPS1 573778 sc-eQTL 1.34e-01 0.104 0.0691 0.694 CD4_TCM L2
ENSG00000146386 ABRACL 533294 sc-eQTL 7.71e-01 -0.0156 0.0534 0.694 CD4_TCM L2
ENSG00000164442 CITED2 187391 sc-eQTL 7.88e-01 0.0214 0.0794 0.694 CD4_TCM L2
ENSG00000231329 AL031772.1 322386 sc-eQTL 8.06e-01 0.0211 0.0858 0.694 CD4_TCM L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 5.24e-01 0.0663 0.104 0.694 CD4_TEM L2
ENSG00000112406 HECA 426959 sc-eQTL 7.06e-01 0.0305 0.0808 0.694 CD4_TEM L2
ENSG00000135597 REPS1 573778 sc-eQTL 1.49e-01 0.127 0.0876 0.694 CD4_TEM L2
ENSG00000146386 ABRACL 533294 sc-eQTL 2.64e-01 -0.0701 0.0626 0.694 CD4_TEM L2
ENSG00000164442 CITED2 187391 sc-eQTL 1.15e-01 -0.13 0.0819 0.694 CD4_TEM L2
ENSG00000231329 AL031772.1 322386 sc-eQTL 4.55e-01 -0.0644 0.0861 0.694 CD4_TEM L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 2.41e-01 0.125 0.106 0.694 CD8_CTL L2
ENSG00000112406 HECA 426959 sc-eQTL 4.67e-01 -0.0566 0.0777 0.694 CD8_CTL L2
ENSG00000135597 REPS1 573778 sc-eQTL 4.33e-01 0.0653 0.0832 0.694 CD8_CTL L2
ENSG00000146386 ABRACL 533294 sc-eQTL 9.42e-01 -0.00491 0.0674 0.694 CD8_CTL L2
ENSG00000164442 CITED2 187391 sc-eQTL 1.59e-01 -0.11 0.0781 0.694 CD8_CTL L2
ENSG00000231329 AL031772.1 322386 sc-eQTL 3.44e-01 0.0891 0.0939 0.694 CD8_CTL L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 2.47e-02 0.227 0.1 0.694 CD8_Naive L2
ENSG00000112406 HECA 426959 sc-eQTL 7.16e-01 -0.0285 0.0782 0.694 CD8_Naive L2
ENSG00000135597 REPS1 573778 sc-eQTL 6.27e-02 0.146 0.0778 0.694 CD8_Naive L2
ENSG00000146386 ABRACL 533294 sc-eQTL 5.25e-01 -0.0262 0.0411 0.694 CD8_Naive L2
ENSG00000164442 CITED2 187391 sc-eQTL 1.58e-01 0.117 0.0828 0.694 CD8_Naive L2
ENSG00000231329 AL031772.1 322386 sc-eQTL 1.76e-01 -0.129 0.0948 0.694 CD8_Naive L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 7.01e-02 -0.205 0.112 0.694 CD8_TCM L2
ENSG00000112406 HECA 426959 sc-eQTL 5.44e-01 -0.0503 0.0829 0.694 CD8_TCM L2
ENSG00000135597 REPS1 573778 sc-eQTL 8.75e-01 0.0136 0.0862 0.694 CD8_TCM L2
ENSG00000146386 ABRACL 533294 sc-eQTL 9.35e-01 -0.00701 0.0859 0.694 CD8_TCM L2
ENSG00000164442 CITED2 187391 sc-eQTL 6.57e-01 -0.0393 0.0883 0.694 CD8_TCM L2
ENSG00000231329 AL031772.1 322386 sc-eQTL 2.42e-01 -0.109 0.0929 0.694 CD8_TCM L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 2.85e-01 0.11 0.103 0.685 CD8_TEM L2
ENSG00000112406 HECA 426959 sc-eQTL 7.67e-01 0.0287 0.0966 0.685 CD8_TEM L2
ENSG00000135597 REPS1 573778 sc-eQTL 2.46e-01 0.117 0.1 0.685 CD8_TEM L2
ENSG00000146386 ABRACL 533294 sc-eQTL 3.38e-01 -0.0744 0.0774 0.685 CD8_TEM L2
ENSG00000164442 CITED2 187391 sc-eQTL 1.97e-01 -0.109 0.0839 0.685 CD8_TEM L2
ENSG00000231329 AL031772.1 322386 sc-eQTL 5.47e-01 -0.0577 0.0958 0.685 CD8_TEM L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 2.78e-01 0.12 0.111 0.695 MAIT L2
ENSG00000112406 HECA 426959 sc-eQTL 6.34e-01 -0.0402 0.0844 0.695 MAIT L2
ENSG00000135597 REPS1 573778 sc-eQTL 5.38e-02 0.175 0.0901 0.695 MAIT L2
ENSG00000146386 ABRACL 533294 sc-eQTL 6.37e-01 -0.0316 0.0668 0.695 MAIT L2
ENSG00000164442 CITED2 187391 sc-eQTL 2.46e-01 -0.0913 0.0784 0.695 MAIT L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 2.64e-01 0.114 0.101 0.696 NK_CD56bright L2
ENSG00000112406 HECA 426959 sc-eQTL 5.69e-01 -0.0526 0.0921 0.696 NK_CD56bright L2
ENSG00000135597 REPS1 573778 sc-eQTL 6.31e-01 0.0413 0.0859 0.696 NK_CD56bright L2
ENSG00000146386 ABRACL 533294 sc-eQTL 7.26e-01 -0.0278 0.0792 0.696 NK_CD56bright L2
ENSG00000164442 CITED2 187391 sc-eQTL 3.55e-01 -0.0785 0.0847 0.696 NK_CD56bright L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 7.14e-01 0.0344 0.0935 0.692 NK_CD56dim L2
ENSG00000112406 HECA 426959 sc-eQTL 3.94e-01 -0.0686 0.0803 0.692 NK_CD56dim L2
ENSG00000135597 REPS1 573778 sc-eQTL 7.01e-01 0.0293 0.0762 0.692 NK_CD56dim L2
ENSG00000146386 ABRACL 533294 sc-eQTL 9.59e-01 0.00263 0.0516 0.692 NK_CD56dim L2
ENSG00000164442 CITED2 187391 sc-eQTL 5.39e-01 -0.0423 0.0688 0.692 NK_CD56dim L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 2.04e-01 0.137 0.107 0.699 NK_HLA L2
ENSG00000112406 HECA 426959 sc-eQTL 8.82e-01 0.015 0.101 0.699 NK_HLA L2
ENSG00000135597 REPS1 573778 sc-eQTL 2.62e-01 -0.112 0.0992 0.699 NK_HLA L2
ENSG00000146386 ABRACL 533294 sc-eQTL 5.97e-01 -0.0433 0.0818 0.699 NK_HLA L2
ENSG00000164442 CITED2 187391 sc-eQTL 7.40e-01 0.0291 0.0874 0.699 NK_HLA L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 6.50e-01 0.0438 0.0964 0.692 NK_cytokine L2
ENSG00000112406 HECA 426959 sc-eQTL 5.88e-01 0.045 0.083 0.692 NK_cytokine L2
ENSG00000135597 REPS1 573778 sc-eQTL 7.44e-01 0.028 0.0857 0.692 NK_cytokine L2
ENSG00000146386 ABRACL 533294 sc-eQTL 5.75e-01 0.0309 0.0552 0.692 NK_cytokine L2
ENSG00000164442 CITED2 187391 sc-eQTL 6.71e-01 -0.0307 0.0721 0.692 NK_cytokine L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 5.94e-03 0.339 0.121 0.715 PB L2
ENSG00000112406 HECA 426959 sc-eQTL 5.90e-01 -0.0735 0.136 0.715 PB L2
ENSG00000135597 REPS1 573778 sc-eQTL 8.25e-01 -0.0268 0.121 0.715 PB L2
ENSG00000146386 ABRACL 533294 sc-eQTL 8.70e-01 0.0139 0.0846 0.715 PB L2
ENSG00000164440 TXLNB 270041 sc-eQTL 4.77e-01 0.088 0.123 0.715 PB L2
ENSG00000164442 CITED2 187391 sc-eQTL 9.43e-01 0.0067 0.093 0.715 PB L2
ENSG00000226571 AL592429.2 290677 sc-eQTL 8.81e-01 -0.0187 0.125 0.715 PB L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 8.90e-01 0.0149 0.108 0.691 Pro_T L2
ENSG00000112406 HECA 426959 sc-eQTL 3.35e-01 0.0817 0.0845 0.691 Pro_T L2
ENSG00000135597 REPS1 573778 sc-eQTL 3.76e-01 -0.0884 0.0996 0.691 Pro_T L2
ENSG00000146386 ABRACL 533294 sc-eQTL 3.24e-01 0.0635 0.0642 0.691 Pro_T L2
ENSG00000164442 CITED2 187391 sc-eQTL 7.44e-01 -0.025 0.0766 0.691 Pro_T L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 9.08e-01 0.0115 0.0988 0.694 Treg L2
ENSG00000112406 HECA 426959 sc-eQTL 5.31e-02 -0.158 0.0813 0.694 Treg L2
ENSG00000135597 REPS1 573778 sc-eQTL 5.61e-01 -0.0494 0.0849 0.694 Treg L2
ENSG00000146386 ABRACL 533294 sc-eQTL 5.30e-01 0.0455 0.0723 0.694 Treg L2
ENSG00000164442 CITED2 187391 sc-eQTL 6.46e-01 -0.0372 0.0807 0.694 Treg L2
ENSG00000231329 AL031772.1 322386 sc-eQTL 9.48e-01 -0.00601 0.0924 0.694 Treg L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 4.50e-01 -0.0786 0.104 0.698 cDC L2
ENSG00000112406 HECA 426959 sc-eQTL 3.89e-01 -0.0852 0.0988 0.698 cDC L2
ENSG00000135540 NHSL1 869468 sc-eQTL 5.96e-01 -0.0514 0.0968 0.698 cDC L2
ENSG00000135597 REPS1 573778 sc-eQTL 3.56e-01 -0.103 0.111 0.698 cDC L2
ENSG00000146386 ABRACL 533294 sc-eQTL 3.90e-01 -0.0785 0.0911 0.698 cDC L2
ENSG00000164442 CITED2 187391 sc-eQTL 7.26e-01 0.0339 0.0968 0.698 cDC L2
ENSG00000225177 AL590617.2 869491 sc-eQTL 1.06e-01 0.172 0.106 0.698 cDC L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 1.50e-02 0.192 0.0784 0.694 cMono_IL1B L2
ENSG00000112406 HECA 426959 sc-eQTL 2.75e-01 -0.0717 0.0655 0.694 cMono_IL1B L2
ENSG00000135540 NHSL1 869468 sc-eQTL 8.08e-01 0.0233 0.0957 0.694 cMono_IL1B L2
ENSG00000135597 REPS1 573778 sc-eQTL 9.71e-01 -0.00312 0.0855 0.694 cMono_IL1B L2
ENSG00000146386 ABRACL 533294 sc-eQTL 3.33e-01 0.0696 0.0717 0.694 cMono_IL1B L2
ENSG00000164442 CITED2 187391 sc-eQTL 8.19e-01 0.0172 0.0752 0.694 cMono_IL1B L2
ENSG00000225177 AL590617.2 869491 sc-eQTL 9.06e-01 0.0119 0.1 0.694 cMono_IL1B L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 5.34e-01 0.0563 0.0903 0.694 cMono_S100A L2
ENSG00000112406 HECA 426959 sc-eQTL 1.38e-01 -0.113 0.076 0.694 cMono_S100A L2
ENSG00000135540 NHSL1 869468 sc-eQTL 3.29e-02 0.206 0.0958 0.694 cMono_S100A L2
ENSG00000135597 REPS1 573778 sc-eQTL 5.33e-01 -0.0572 0.0915 0.694 cMono_S100A L2
ENSG00000146386 ABRACL 533294 sc-eQTL 5.64e-01 0.046 0.0796 0.694 cMono_S100A L2
ENSG00000164442 CITED2 187391 sc-eQTL 7.13e-01 -0.029 0.0788 0.694 cMono_S100A L2
ENSG00000225177 AL590617.2 869491 sc-eQTL 1.24e-01 0.163 0.105 0.694 cMono_S100A L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 3.23e-01 0.119 0.12 0.7 gdT L2
ENSG00000112406 HECA 426959 sc-eQTL 5.58e-01 0.0669 0.114 0.7 gdT L2
ENSG00000135597 REPS1 573778 sc-eQTL 5.50e-01 0.0707 0.118 0.7 gdT L2
ENSG00000146386 ABRACL 533294 sc-eQTL 3.45e-02 -0.187 0.0875 0.7 gdT L2
ENSG00000164442 CITED2 187391 sc-eQTL 4.67e-01 -0.0746 0.102 0.7 gdT L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 8.21e-01 -0.0245 0.108 0.7 intMono L2
ENSG00000112406 HECA 426959 sc-eQTL 1.21e-01 0.137 0.0883 0.7 intMono L2
ENSG00000135540 NHSL1 869468 sc-eQTL 2.03e-01 -0.124 0.0975 0.7 intMono L2
ENSG00000135597 REPS1 573778 sc-eQTL 9.78e-01 0.00273 0.101 0.7 intMono L2
ENSG00000146386 ABRACL 533294 sc-eQTL 9.17e-01 0.00961 0.0923 0.7 intMono L2
ENSG00000164442 CITED2 187391 sc-eQTL 2.26e-01 -0.109 0.0893 0.7 intMono L2
ENSG00000225177 AL590617.2 869491 sc-eQTL 9.21e-01 -0.011 0.11 0.7 intMono L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 1.87e-01 0.129 0.0976 0.692 ncMono L2
ENSG00000112406 HECA 426959 sc-eQTL 4.71e-01 -0.0647 0.0895 0.692 ncMono L2
ENSG00000135540 NHSL1 869468 sc-eQTL 1.20e-01 0.146 0.0936 0.692 ncMono L2
ENSG00000135597 REPS1 573778 sc-eQTL 1.22e-01 -0.11 0.0705 0.692 ncMono L2
ENSG00000146386 ABRACL 533294 sc-eQTL 3.46e-01 0.0805 0.0853 0.692 ncMono L2
ENSG00000164442 CITED2 187391 sc-eQTL 9.35e-01 0.0059 0.0726 0.692 ncMono L2
ENSG00000225177 AL590617.2 869491 sc-eQTL 7.51e-01 0.0332 0.105 0.692 ncMono L2
ENSG00000024862 CCDC28A 788530 sc-eQTL 6.68e-02 0.203 0.11 0.692 pDC L2
ENSG00000112406 HECA 426959 sc-eQTL 2.34e-01 -0.112 0.0938 0.692 pDC L2
ENSG00000135540 NHSL1 869468 sc-eQTL 2.84e-01 0.0923 0.0858 0.692 pDC L2
ENSG00000135597 REPS1 573778 sc-eQTL 7.52e-01 -0.0276 0.0872 0.692 pDC L2
ENSG00000146386 ABRACL 533294 sc-eQTL 9.37e-01 -0.00749 0.0953 0.692 pDC L2
ENSG00000164442 CITED2 187391 sc-eQTL 8.03e-02 -0.195 0.111 0.692 pDC L2
ENSG00000225177 AL590617.2 869491 sc-eQTL 4.05e-01 0.0721 0.0863 0.692 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 788530 sc-eQTL 1.55e-02 0.229 0.094 0.694 B_Memory LOneK1K
ENSG00000112406 HECA 426959 sc-eQTL 4.53e-02 -0.169 0.084 0.694 B_Memory LOneK1K
ENSG00000135597 REPS1 573778 sc-eQTL 7.13e-01 0.0324 0.0879 0.694 B_Memory LOneK1K
ENSG00000146386 ABRACL 533294 sc-eQTL 3.82e-01 -0.0532 0.0608 0.694 B_Memory LOneK1K
ENSG00000164440 TXLNB 270041 sc-eQTL 2.50e-01 -0.116 0.101 0.694 B_Memory LOneK1K
ENSG00000164442 CITED2 187391 sc-eQTL 5.01e-01 -0.0576 0.0855 0.694 B_Memory LOneK1K
ENSG00000226571 AL592429.2 290677 sc-eQTL 2.88e-01 0.106 0.0993 0.694 B_Memory LOneK1K
ENSG00000024862 CCDC28A 788530 sc-eQTL 2.80e-01 -0.0961 0.0888 0.694 B_Naive LOneK1K
ENSG00000112406 HECA 426959 sc-eQTL 2.70e-02 -0.183 0.0823 0.694 B_Naive LOneK1K
ENSG00000135597 REPS1 573778 sc-eQTL 1.27e-01 0.108 0.0706 0.694 B_Naive LOneK1K
ENSG00000146386 ABRACL 533294 sc-eQTL 6.30e-01 0.024 0.0498 0.694 B_Naive LOneK1K
ENSG00000164440 TXLNB 270041 sc-eQTL 5.23e-01 -0.0666 0.104 0.694 B_Naive LOneK1K
ENSG00000164442 CITED2 187391 sc-eQTL 9.05e-01 0.00902 0.0757 0.694 B_Naive LOneK1K
ENSG00000226571 AL592429.2 290677 sc-eQTL 4.96e-01 0.0606 0.0889 0.694 B_Naive LOneK1K
ENSG00000024862 CCDC28A 788530 sc-eQTL 2.07e-02 0.168 0.0722 0.694 CD14_Mono LOneK1K
ENSG00000112406 HECA 426959 sc-eQTL 9.97e-02 -0.108 0.0652 0.694 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 869468 sc-eQTL 1.30e-01 0.145 0.0954 0.694 CD14_Mono LOneK1K
ENSG00000135597 REPS1 573778 sc-eQTL 7.16e-01 -0.0287 0.0789 0.694 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 533294 sc-eQTL 3.71e-01 0.0629 0.0701 0.694 CD14_Mono LOneK1K
ENSG00000164442 CITED2 187391 sc-eQTL 7.48e-01 0.0247 0.0768 0.694 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 869491 sc-eQTL 3.10e-01 0.104 0.103 0.694 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 788530 sc-eQTL 6.90e-01 0.0403 0.101 0.692 CD16_Mono LOneK1K
ENSG00000112406 HECA 426959 sc-eQTL 5.42e-01 -0.0525 0.086 0.692 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 869468 sc-eQTL 9.19e-01 -0.00979 0.0957 0.692 CD16_Mono LOneK1K
ENSG00000135597 REPS1 573778 sc-eQTL 1.78e-01 -0.0803 0.0593 0.692 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 533294 sc-eQTL 4.98e-01 0.0592 0.0872 0.692 CD16_Mono LOneK1K
ENSG00000164442 CITED2 187391 sc-eQTL 8.57e-01 -0.0136 0.0751 0.692 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 869491 sc-eQTL 5.45e-01 0.0642 0.106 0.692 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 788530 sc-eQTL 5.69e-01 0.051 0.0894 0.692 NK_CD56dim LOneK1K
ENSG00000112406 HECA 426959 sc-eQTL 7.92e-01 -0.0201 0.0763 0.692 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 573778 sc-eQTL 8.94e-01 0.00999 0.0746 0.692 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 533294 sc-eQTL 8.45e-01 0.0094 0.0481 0.692 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 187391 sc-eQTL 3.87e-01 -0.0602 0.0694 0.692 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000135540 NHSL1 869468 eQTL 0.0144 0.063 0.0257 0.0 0.0 0.292

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000135540 NHSL1 869468 2.67e-07 1.25e-07 3.56e-08 1.84e-07 8.83e-08 9.61e-08 1.44e-07 5.19e-08 1.4e-07 4.57e-08 1.62e-07 7.78e-08 1.41e-07 6.56e-08 5.99e-08 7.26e-08 3.94e-08 1.18e-07 5.82e-08 4.42e-08 1.13e-07 1.23e-07 1.39e-07 3.42e-08 1.32e-07 1.14e-07 1.11e-07 9.57e-08 1.05e-07 1.1e-07 9.91e-08 3.08e-08 3.61e-08 8.68e-08 8.94e-08 3.65e-08 5.22e-08 9.22e-08 6.54e-08 3.98e-08 4.35e-08 1.36e-07 3.99e-08 2.4e-08 5.43e-08 1.83e-08 1.19e-07 3.8e-09 5.02e-08