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Genes within 1Mb (chr6:139547773:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 774264 sc-eQTL 2.73e-01 -0.0846 0.0769 0.314 B L1
ENSG00000112406 HECA 412693 sc-eQTL 8.06e-03 0.197 0.0737 0.314 B L1
ENSG00000135597 REPS1 559512 sc-eQTL 4.25e-01 -0.0529 0.0662 0.314 B L1
ENSG00000146386 ABRACL 519028 sc-eQTL 9.30e-01 0.00343 0.0389 0.314 B L1
ENSG00000164440 TXLNB 255775 sc-eQTL 4.44e-01 0.0731 0.0952 0.314 B L1
ENSG00000164442 CITED2 173125 sc-eQTL 6.04e-01 0.0312 0.06 0.314 B L1
ENSG00000226571 AL592429.2 276411 sc-eQTL 1.91e-01 -0.0873 0.0665 0.314 B L1
ENSG00000024862 CCDC28A 774264 sc-eQTL 9.40e-02 -0.145 0.0861 0.314 CD4T L1
ENSG00000112406 HECA 412693 sc-eQTL 1.75e-01 0.098 0.072 0.314 CD4T L1
ENSG00000135597 REPS1 559512 sc-eQTL 6.99e-01 -0.022 0.0568 0.314 CD4T L1
ENSG00000146386 ABRACL 519028 sc-eQTL 6.45e-01 0.0192 0.0417 0.314 CD4T L1
ENSG00000164442 CITED2 173125 sc-eQTL 1.21e-01 -0.11 0.0707 0.314 CD4T L1
ENSG00000231329 AL031772.1 308120 sc-eQTL 6.02e-01 0.0366 0.0701 0.314 CD4T L1
ENSG00000024862 CCDC28A 774264 sc-eQTL 5.65e-02 -0.18 0.0939 0.314 CD8T L1
ENSG00000112406 HECA 412693 sc-eQTL 3.22e-01 0.0672 0.0677 0.314 CD8T L1
ENSG00000135597 REPS1 559512 sc-eQTL 4.06e-02 -0.13 0.0632 0.314 CD8T L1
ENSG00000146386 ABRACL 519028 sc-eQTL 1.57e-01 0.0513 0.0362 0.314 CD8T L1
ENSG00000164442 CITED2 173125 sc-eQTL 2.28e-01 -0.0831 0.0687 0.314 CD8T L1
ENSG00000231329 AL031772.1 308120 sc-eQTL 4.21e-01 0.0674 0.0836 0.314 CD8T L1
ENSG00000024862 CCDC28A 774264 sc-eQTL 4.73e-01 0.07 0.0975 0.322 DC L1
ENSG00000112406 HECA 412693 sc-eQTL 1.26e-02 0.199 0.0791 0.322 DC L1
ENSG00000135540 NHSL1 855202 sc-eQTL 8.21e-01 -0.0202 0.0895 0.322 DC L1
ENSG00000135597 REPS1 559512 sc-eQTL 2.69e-01 0.0874 0.0789 0.322 DC L1
ENSG00000146386 ABRACL 519028 sc-eQTL 5.72e-01 0.0438 0.0774 0.322 DC L1
ENSG00000164442 CITED2 173125 sc-eQTL 1.36e-01 0.137 0.0915 0.322 DC L1
ENSG00000225177 AL590617.2 855225 sc-eQTL 3.87e-02 -0.193 0.0925 0.322 DC L1
ENSG00000024862 CCDC28A 774264 sc-eQTL 1.48e-02 -0.17 0.0691 0.314 Mono L1
ENSG00000112406 HECA 412693 sc-eQTL 1.34e-01 0.0958 0.0636 0.314 Mono L1
ENSG00000135540 NHSL1 855202 sc-eQTL 5.27e-01 -0.058 0.0915 0.314 Mono L1
ENSG00000135597 REPS1 559512 sc-eQTL 2.23e-01 0.0653 0.0535 0.314 Mono L1
ENSG00000146386 ABRACL 519028 sc-eQTL 4.67e-02 -0.138 0.0692 0.314 Mono L1
ENSG00000164442 CITED2 173125 sc-eQTL 7.33e-01 -0.0252 0.0738 0.314 Mono L1
ENSG00000225177 AL590617.2 855225 sc-eQTL 3.78e-01 -0.0839 0.0951 0.314 Mono L1
ENSG00000024862 CCDC28A 774264 sc-eQTL 9.61e-01 -0.00408 0.0827 0.315 NK L1
ENSG00000112406 HECA 412693 sc-eQTL 8.30e-01 0.0153 0.0714 0.315 NK L1
ENSG00000135597 REPS1 559512 sc-eQTL 9.13e-01 -0.00744 0.068 0.315 NK L1
ENSG00000146386 ABRACL 519028 sc-eQTL 8.04e-01 -0.0123 0.0497 0.315 NK L1
ENSG00000164442 CITED2 173125 sc-eQTL 2.28e-01 0.0796 0.0658 0.315 NK L1
ENSG00000024862 CCDC28A 774264 sc-eQTL 4.69e-01 0.0715 0.0986 0.314 Other_T L1
ENSG00000112406 HECA 412693 sc-eQTL 7.94e-01 0.0187 0.0714 0.314 Other_T L1
ENSG00000135597 REPS1 559512 sc-eQTL 8.81e-01 -0.0115 0.0768 0.314 Other_T L1
ENSG00000146386 ABRACL 519028 sc-eQTL 3.30e-01 0.049 0.0502 0.314 Other_T L1
ENSG00000164442 CITED2 173125 sc-eQTL 2.82e-01 0.0633 0.0587 0.314 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 774264 sc-eQTL 2.03e-01 -0.137 0.108 0.309 B_Activated L2
ENSG00000112406 HECA 412693 sc-eQTL 9.52e-01 -0.00624 0.103 0.309 B_Activated L2
ENSG00000135597 REPS1 559512 sc-eQTL 1.82e-01 -0.144 0.107 0.309 B_Activated L2
ENSG00000146386 ABRACL 519028 sc-eQTL 5.05e-01 -0.0652 0.0975 0.309 B_Activated L2
ENSG00000164440 TXLNB 255775 sc-eQTL 6.39e-01 -0.0393 0.0835 0.309 B_Activated L2
ENSG00000164442 CITED2 173125 sc-eQTL 1.17e-01 0.164 0.104 0.309 B_Activated L2
ENSG00000226571 AL592429.2 276411 sc-eQTL 8.24e-01 0.0234 0.105 0.309 B_Activated L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 2.73e-02 -0.212 0.0954 0.315 B_Intermediate L2
ENSG00000112406 HECA 412693 sc-eQTL 4.60e-02 0.166 0.0828 0.315 B_Intermediate L2
ENSG00000135597 REPS1 559512 sc-eQTL 3.96e-01 0.0765 0.09 0.315 B_Intermediate L2
ENSG00000146386 ABRACL 519028 sc-eQTL 1.51e-01 0.11 0.0764 0.315 B_Intermediate L2
ENSG00000164440 TXLNB 255775 sc-eQTL 4.44e-01 0.072 0.0939 0.315 B_Intermediate L2
ENSG00000164442 CITED2 173125 sc-eQTL 8.75e-01 0.0137 0.0865 0.315 B_Intermediate L2
ENSG00000226571 AL592429.2 276411 sc-eQTL 3.08e-02 -0.201 0.0927 0.315 B_Intermediate L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 2.00e-01 -0.126 0.0979 0.31 B_Memory L2
ENSG00000112406 HECA 412693 sc-eQTL 2.25e-01 0.103 0.0847 0.31 B_Memory L2
ENSG00000135597 REPS1 559512 sc-eQTL 1.66e-01 -0.127 0.0917 0.31 B_Memory L2
ENSG00000146386 ABRACL 519028 sc-eQTL 3.41e-01 0.0694 0.0727 0.31 B_Memory L2
ENSG00000164440 TXLNB 255775 sc-eQTL 4.23e-01 0.0746 0.0928 0.31 B_Memory L2
ENSG00000164442 CITED2 173125 sc-eQTL 3.03e-01 0.0881 0.0852 0.31 B_Memory L2
ENSG00000226571 AL592429.2 276411 sc-eQTL 6.73e-01 0.0444 0.105 0.31 B_Memory L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 5.71e-01 0.0518 0.0913 0.314 B_Naive1 L2
ENSG00000112406 HECA 412693 sc-eQTL 6.07e-02 0.149 0.079 0.314 B_Naive1 L2
ENSG00000135597 REPS1 559512 sc-eQTL 4.37e-01 -0.0573 0.0736 0.314 B_Naive1 L2
ENSG00000146386 ABRACL 519028 sc-eQTL 4.21e-01 0.0415 0.0515 0.314 B_Naive1 L2
ENSG00000164440 TXLNB 255775 sc-eQTL 2.38e-01 0.114 0.0962 0.314 B_Naive1 L2
ENSG00000164442 CITED2 173125 sc-eQTL 6.71e-01 -0.0299 0.0702 0.314 B_Naive1 L2
ENSG00000226571 AL592429.2 276411 sc-eQTL 9.18e-01 0.00954 0.0922 0.314 B_Naive1 L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 6.02e-01 0.0471 0.0902 0.313 B_Naive2 L2
ENSG00000112406 HECA 412693 sc-eQTL 1.12e-01 0.135 0.0844 0.313 B_Naive2 L2
ENSG00000135597 REPS1 559512 sc-eQTL 6.74e-01 -0.0341 0.081 0.313 B_Naive2 L2
ENSG00000146386 ABRACL 519028 sc-eQTL 2.34e-01 -0.071 0.0595 0.313 B_Naive2 L2
ENSG00000164440 TXLNB 255775 sc-eQTL 6.36e-01 -0.0448 0.0944 0.313 B_Naive2 L2
ENSG00000164442 CITED2 173125 sc-eQTL 8.80e-01 -0.0145 0.0964 0.313 B_Naive2 L2
ENSG00000226571 AL592429.2 276411 sc-eQTL 3.53e-01 -0.0822 0.0883 0.313 B_Naive2 L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 3.80e-01 -0.0824 0.0937 0.314 CD4_CTL L2
ENSG00000112406 HECA 412693 sc-eQTL 3.31e-01 0.092 0.0945 0.314 CD4_CTL L2
ENSG00000135597 REPS1 559512 sc-eQTL 7.80e-01 0.0257 0.092 0.314 CD4_CTL L2
ENSG00000146386 ABRACL 519028 sc-eQTL 9.67e-01 -0.00343 0.0838 0.314 CD4_CTL L2
ENSG00000164442 CITED2 173125 sc-eQTL 7.55e-02 0.149 0.0836 0.314 CD4_CTL L2
ENSG00000231329 AL031772.1 308120 sc-eQTL 5.33e-01 0.0542 0.0868 0.314 CD4_CTL L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 5.17e-01 -0.059 0.091 0.314 CD4_Naive L2
ENSG00000112406 HECA 412693 sc-eQTL 1.77e-01 0.0955 0.0705 0.314 CD4_Naive L2
ENSG00000135597 REPS1 559512 sc-eQTL 8.32e-01 -0.0134 0.0628 0.314 CD4_Naive L2
ENSG00000146386 ABRACL 519028 sc-eQTL 8.98e-01 -0.00542 0.0423 0.314 CD4_Naive L2
ENSG00000164442 CITED2 173125 sc-eQTL 7.46e-02 -0.128 0.0713 0.314 CD4_Naive L2
ENSG00000231329 AL031772.1 308120 sc-eQTL 5.76e-01 0.0407 0.0726 0.314 CD4_Naive L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 1.01e-03 -0.285 0.0856 0.314 CD4_TCM L2
ENSG00000112406 HECA 412693 sc-eQTL 8.44e-01 0.0138 0.0702 0.314 CD4_TCM L2
ENSG00000135597 REPS1 559512 sc-eQTL 1.56e-01 -0.0943 0.0663 0.314 CD4_TCM L2
ENSG00000146386 ABRACL 519028 sc-eQTL 8.61e-01 0.00894 0.0512 0.314 CD4_TCM L2
ENSG00000164442 CITED2 173125 sc-eQTL 6.64e-01 -0.0331 0.0761 0.314 CD4_TCM L2
ENSG00000231329 AL031772.1 308120 sc-eQTL 8.18e-01 -0.0189 0.0823 0.314 CD4_TCM L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 1.06e-01 -0.161 0.0992 0.314 CD4_TEM L2
ENSG00000112406 HECA 412693 sc-eQTL 9.77e-01 -0.00227 0.0776 0.314 CD4_TEM L2
ENSG00000135597 REPS1 559512 sc-eQTL 3.51e-01 -0.0789 0.0844 0.314 CD4_TEM L2
ENSG00000146386 ABRACL 519028 sc-eQTL 2.97e-01 0.0629 0.0601 0.314 CD4_TEM L2
ENSG00000164442 CITED2 173125 sc-eQTL 9.39e-02 0.132 0.0786 0.314 CD4_TEM L2
ENSG00000231329 AL031772.1 308120 sc-eQTL 6.19e-01 0.0412 0.0828 0.314 CD4_TEM L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 1.06e-01 -0.166 0.102 0.314 CD8_CTL L2
ENSG00000112406 HECA 412693 sc-eQTL 6.13e-01 0.0378 0.0746 0.314 CD8_CTL L2
ENSG00000135597 REPS1 559512 sc-eQTL 4.16e-01 -0.065 0.0798 0.314 CD8_CTL L2
ENSG00000146386 ABRACL 519028 sc-eQTL 6.39e-01 -0.0304 0.0646 0.314 CD8_CTL L2
ENSG00000164442 CITED2 173125 sc-eQTL 1.89e-01 0.0987 0.075 0.314 CD8_CTL L2
ENSG00000231329 AL031772.1 308120 sc-eQTL 7.75e-01 -0.0259 0.0903 0.314 CD8_CTL L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 9.81e-02 -0.161 0.0967 0.314 CD8_Naive L2
ENSG00000112406 HECA 412693 sc-eQTL 5.77e-01 0.0419 0.0751 0.314 CD8_Naive L2
ENSG00000135597 REPS1 559512 sc-eQTL 7.64e-02 -0.133 0.0748 0.314 CD8_Naive L2
ENSG00000146386 ABRACL 519028 sc-eQTL 4.94e-01 0.027 0.0395 0.314 CD8_Naive L2
ENSG00000164442 CITED2 173125 sc-eQTL 1.51e-01 -0.115 0.0795 0.314 CD8_Naive L2
ENSG00000231329 AL031772.1 308120 sc-eQTL 1.03e-01 0.149 0.0908 0.314 CD8_Naive L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 1.12e-01 0.174 0.109 0.315 CD8_TCM L2
ENSG00000112406 HECA 412693 sc-eQTL 3.77e-01 0.0708 0.08 0.315 CD8_TCM L2
ENSG00000135597 REPS1 559512 sc-eQTL 6.57e-01 -0.037 0.0833 0.315 CD8_TCM L2
ENSG00000146386 ABRACL 519028 sc-eQTL 6.24e-01 0.0407 0.083 0.315 CD8_TCM L2
ENSG00000164442 CITED2 173125 sc-eQTL 9.71e-01 -0.00316 0.0854 0.315 CD8_TCM L2
ENSG00000231329 AL031772.1 308120 sc-eQTL 2.76e-01 0.0982 0.0898 0.315 CD8_TCM L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 9.87e-01 -0.00162 0.0997 0.32 CD8_TEM L2
ENSG00000112406 HECA 412693 sc-eQTL 5.02e-01 -0.0627 0.0932 0.32 CD8_TEM L2
ENSG00000135597 REPS1 559512 sc-eQTL 1.34e-01 -0.145 0.0966 0.32 CD8_TEM L2
ENSG00000146386 ABRACL 519028 sc-eQTL 4.33e-01 0.0588 0.0747 0.32 CD8_TEM L2
ENSG00000164442 CITED2 173125 sc-eQTL 2.52e-01 0.0931 0.0811 0.32 CD8_TEM L2
ENSG00000231329 AL031772.1 308120 sc-eQTL 3.25e-01 0.0911 0.0923 0.32 CD8_TEM L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 8.93e-01 -0.0145 0.108 0.314 MAIT L2
ENSG00000112406 HECA 412693 sc-eQTL 9.11e-01 0.0092 0.082 0.314 MAIT L2
ENSG00000135597 REPS1 559512 sc-eQTL 8.20e-02 -0.153 0.0877 0.314 MAIT L2
ENSG00000146386 ABRACL 519028 sc-eQTL 4.47e-01 0.0495 0.0648 0.314 MAIT L2
ENSG00000164442 CITED2 173125 sc-eQTL 5.27e-02 0.148 0.0758 0.314 MAIT L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 3.95e-01 -0.0829 0.0973 0.311 NK_CD56bright L2
ENSG00000112406 HECA 412693 sc-eQTL 6.07e-01 0.0455 0.0883 0.311 NK_CD56bright L2
ENSG00000135597 REPS1 559512 sc-eQTL 9.07e-01 -0.0096 0.0824 0.311 NK_CD56bright L2
ENSG00000146386 ABRACL 519028 sc-eQTL 8.23e-01 0.017 0.0759 0.311 NK_CD56bright L2
ENSG00000164442 CITED2 173125 sc-eQTL 4.87e-01 0.0566 0.0814 0.311 NK_CD56bright L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 7.82e-01 -0.025 0.0901 0.315 NK_CD56dim L2
ENSG00000112406 HECA 412693 sc-eQTL 5.05e-01 0.0517 0.0774 0.315 NK_CD56dim L2
ENSG00000135597 REPS1 559512 sc-eQTL 9.73e-01 0.00252 0.0735 0.315 NK_CD56dim L2
ENSG00000146386 ABRACL 519028 sc-eQTL 4.53e-01 -0.0374 0.0497 0.315 NK_CD56dim L2
ENSG00000164442 CITED2 173125 sc-eQTL 2.92e-01 0.0698 0.0662 0.315 NK_CD56dim L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 4.21e-01 -0.0835 0.103 0.308 NK_HLA L2
ENSG00000112406 HECA 412693 sc-eQTL 8.85e-01 0.014 0.0969 0.308 NK_HLA L2
ENSG00000135597 REPS1 559512 sc-eQTL 4.05e-01 0.0796 0.0955 0.308 NK_HLA L2
ENSG00000146386 ABRACL 519028 sc-eQTL 7.05e-01 0.0298 0.0786 0.308 NK_HLA L2
ENSG00000164442 CITED2 173125 sc-eQTL 8.55e-01 -0.0154 0.084 0.308 NK_HLA L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 8.72e-01 0.015 0.0927 0.315 NK_cytokine L2
ENSG00000112406 HECA 412693 sc-eQTL 8.00e-01 -0.0203 0.0799 0.315 NK_cytokine L2
ENSG00000135597 REPS1 559512 sc-eQTL 6.94e-01 -0.0325 0.0824 0.315 NK_cytokine L2
ENSG00000146386 ABRACL 519028 sc-eQTL 6.73e-01 -0.0224 0.0531 0.315 NK_cytokine L2
ENSG00000164442 CITED2 173125 sc-eQTL 3.95e-01 0.059 0.0692 0.315 NK_cytokine L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 1.34e-02 -0.28 0.112 0.3 PB L2
ENSG00000112406 HECA 412693 sc-eQTL 7.29e-01 0.0433 0.125 0.3 PB L2
ENSG00000135597 REPS1 559512 sc-eQTL 9.25e-01 0.0105 0.111 0.3 PB L2
ENSG00000146386 ABRACL 519028 sc-eQTL 5.75e-01 -0.0436 0.0775 0.3 PB L2
ENSG00000164440 TXLNB 255775 sc-eQTL 5.91e-01 -0.061 0.113 0.3 PB L2
ENSG00000164442 CITED2 173125 sc-eQTL 9.22e-01 0.00836 0.0854 0.3 PB L2
ENSG00000226571 AL592429.2 276411 sc-eQTL 8.97e-01 0.0149 0.115 0.3 PB L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 6.08e-01 -0.0537 0.104 0.317 Pro_T L2
ENSG00000112406 HECA 412693 sc-eQTL 1.66e-01 -0.114 0.0819 0.317 Pro_T L2
ENSG00000135597 REPS1 559512 sc-eQTL 6.64e-01 0.0422 0.0969 0.317 Pro_T L2
ENSG00000146386 ABRACL 519028 sc-eQTL 1.71e-01 -0.0854 0.0622 0.317 Pro_T L2
ENSG00000164442 CITED2 173125 sc-eQTL 7.92e-01 -0.0196 0.0745 0.317 Pro_T L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 9.31e-01 -0.00823 0.0951 0.314 Treg L2
ENSG00000112406 HECA 412693 sc-eQTL 7.44e-02 0.141 0.0784 0.314 Treg L2
ENSG00000135597 REPS1 559512 sc-eQTL 9.96e-01 -0.000395 0.0818 0.314 Treg L2
ENSG00000146386 ABRACL 519028 sc-eQTL 3.97e-01 -0.059 0.0695 0.314 Treg L2
ENSG00000164442 CITED2 173125 sc-eQTL 7.12e-01 0.0288 0.0777 0.314 Treg L2
ENSG00000231329 AL031772.1 308120 sc-eQTL 6.20e-01 -0.0442 0.0889 0.314 Treg L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 6.95e-01 0.04 0.102 0.31 cDC L2
ENSG00000112406 HECA 412693 sc-eQTL 1.12e-01 0.154 0.0963 0.31 cDC L2
ENSG00000135540 NHSL1 855202 sc-eQTL 7.51e-01 0.0302 0.0948 0.31 cDC L2
ENSG00000135597 REPS1 559512 sc-eQTL 1.12e-01 0.173 0.109 0.31 cDC L2
ENSG00000146386 ABRACL 519028 sc-eQTL 1.64e-01 0.124 0.0889 0.31 cDC L2
ENSG00000164442 CITED2 173125 sc-eQTL 9.09e-01 -0.0109 0.0948 0.31 cDC L2
ENSG00000225177 AL590617.2 855225 sc-eQTL 9.66e-02 -0.173 0.104 0.31 cDC L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 1.14e-02 -0.193 0.0758 0.314 cMono_IL1B L2
ENSG00000112406 HECA 412693 sc-eQTL 3.06e-01 0.0651 0.0634 0.314 cMono_IL1B L2
ENSG00000135540 NHSL1 855202 sc-eQTL 8.70e-01 -0.0151 0.0926 0.314 cMono_IL1B L2
ENSG00000135597 REPS1 559512 sc-eQTL 7.59e-01 0.0254 0.0826 0.314 cMono_IL1B L2
ENSG00000146386 ABRACL 519028 sc-eQTL 9.77e-02 -0.115 0.0691 0.314 cMono_IL1B L2
ENSG00000164442 CITED2 173125 sc-eQTL 7.82e-01 -0.0201 0.0727 0.314 cMono_IL1B L2
ENSG00000225177 AL590617.2 855225 sc-eQTL 8.23e-01 0.0218 0.0969 0.314 cMono_IL1B L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 2.97e-01 -0.0914 0.0874 0.314 cMono_S100A L2
ENSG00000112406 HECA 412693 sc-eQTL 1.89e-01 0.0972 0.0737 0.314 cMono_S100A L2
ENSG00000135540 NHSL1 855202 sc-eQTL 4.13e-02 -0.191 0.0929 0.314 cMono_S100A L2
ENSG00000135597 REPS1 559512 sc-eQTL 5.61e-01 0.0516 0.0887 0.314 cMono_S100A L2
ENSG00000146386 ABRACL 519028 sc-eQTL 2.16e-01 -0.0954 0.0769 0.314 cMono_S100A L2
ENSG00000164442 CITED2 173125 sc-eQTL 9.91e-01 -0.000861 0.0764 0.314 cMono_S100A L2
ENSG00000225177 AL590617.2 855225 sc-eQTL 2.01e-01 -0.131 0.102 0.314 cMono_S100A L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 6.09e-01 -0.062 0.121 0.297 gdT L2
ENSG00000112406 HECA 412693 sc-eQTL 6.65e-01 -0.0498 0.115 0.297 gdT L2
ENSG00000135597 REPS1 559512 sc-eQTL 6.40e-01 -0.0556 0.119 0.297 gdT L2
ENSG00000146386 ABRACL 519028 sc-eQTL 4.61e-02 0.178 0.0882 0.297 gdT L2
ENSG00000164442 CITED2 173125 sc-eQTL 6.12e-01 0.0523 0.103 0.297 gdT L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 3.22e-01 0.103 0.104 0.307 intMono L2
ENSG00000112406 HECA 412693 sc-eQTL 2.44e-01 -0.0997 0.0854 0.307 intMono L2
ENSG00000135540 NHSL1 855202 sc-eQTL 1.37e-01 0.14 0.094 0.307 intMono L2
ENSG00000135597 REPS1 559512 sc-eQTL 9.10e-01 0.0111 0.0976 0.307 intMono L2
ENSG00000146386 ABRACL 519028 sc-eQTL 6.37e-01 -0.0421 0.089 0.307 intMono L2
ENSG00000164442 CITED2 173125 sc-eQTL 2.99e-01 0.0898 0.0863 0.307 intMono L2
ENSG00000225177 AL590617.2 855225 sc-eQTL 9.92e-01 0.00113 0.106 0.307 intMono L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 1.57e-01 -0.135 0.0951 0.314 ncMono L2
ENSG00000112406 HECA 412693 sc-eQTL 7.37e-01 0.0293 0.0873 0.314 ncMono L2
ENSG00000135540 NHSL1 855202 sc-eQTL 7.68e-02 -0.162 0.0911 0.314 ncMono L2
ENSG00000135597 REPS1 559512 sc-eQTL 4.75e-02 0.137 0.0685 0.314 ncMono L2
ENSG00000146386 ABRACL 519028 sc-eQTL 3.73e-01 -0.0743 0.0832 0.314 ncMono L2
ENSG00000164442 CITED2 173125 sc-eQTL 9.56e-01 -0.00388 0.0707 0.314 ncMono L2
ENSG00000225177 AL590617.2 855225 sc-eQTL 7.05e-01 -0.0386 0.102 0.314 ncMono L2
ENSG00000024862 CCDC28A 774264 sc-eQTL 2.85e-01 -0.116 0.108 0.319 pDC L2
ENSG00000112406 HECA 412693 sc-eQTL 2.24e-01 0.112 0.0913 0.319 pDC L2
ENSG00000135540 NHSL1 855202 sc-eQTL 3.63e-01 -0.0764 0.0837 0.319 pDC L2
ENSG00000135597 REPS1 559512 sc-eQTL 4.80e-01 0.0601 0.0848 0.319 pDC L2
ENSG00000146386 ABRACL 519028 sc-eQTL 8.41e-01 -0.0187 0.0928 0.319 pDC L2
ENSG00000164442 CITED2 173125 sc-eQTL 4.80e-02 0.215 0.108 0.319 pDC L2
ENSG00000225177 AL590617.2 855225 sc-eQTL 3.40e-01 -0.0805 0.084 0.319 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 774264 sc-eQTL 7.31e-03 -0.246 0.0908 0.314 B_Memory LOneK1K
ENSG00000112406 HECA 412693 sc-eQTL 5.91e-02 0.155 0.0815 0.314 B_Memory LOneK1K
ENSG00000135597 REPS1 559512 sc-eQTL 9.68e-01 0.00347 0.0853 0.314 B_Memory LOneK1K
ENSG00000146386 ABRACL 519028 sc-eQTL 1.73e-01 0.0803 0.0588 0.314 B_Memory LOneK1K
ENSG00000164440 TXLNB 255775 sc-eQTL 1.35e-01 0.146 0.0973 0.314 B_Memory LOneK1K
ENSG00000164442 CITED2 173125 sc-eQTL 3.23e-01 0.082 0.0828 0.314 B_Memory LOneK1K
ENSG00000226571 AL592429.2 276411 sc-eQTL 2.41e-01 -0.113 0.0962 0.314 B_Memory LOneK1K
ENSG00000024862 CCDC28A 774264 sc-eQTL 4.08e-01 0.0707 0.0853 0.314 B_Naive LOneK1K
ENSG00000112406 HECA 412693 sc-eQTL 3.30e-02 0.17 0.079 0.314 B_Naive LOneK1K
ENSG00000135597 REPS1 559512 sc-eQTL 2.17e-01 -0.084 0.0679 0.314 B_Naive LOneK1K
ENSG00000146386 ABRACL 519028 sc-eQTL 8.78e-01 -0.00733 0.0478 0.314 B_Naive LOneK1K
ENSG00000164440 TXLNB 255775 sc-eQTL 4.99e-01 0.0677 0.0999 0.314 B_Naive LOneK1K
ENSG00000164442 CITED2 173125 sc-eQTL 8.78e-01 -0.0112 0.0727 0.314 B_Naive LOneK1K
ENSG00000226571 AL592429.2 276411 sc-eQTL 5.92e-01 -0.0458 0.0853 0.314 B_Naive LOneK1K
ENSG00000024862 CCDC28A 774264 sc-eQTL 6.02e-03 -0.193 0.0696 0.314 CD14_Mono LOneK1K
ENSG00000112406 HECA 412693 sc-eQTL 1.08e-01 0.102 0.0632 0.314 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 855202 sc-eQTL 1.71e-01 -0.127 0.0925 0.314 CD14_Mono LOneK1K
ENSG00000135597 REPS1 559512 sc-eQTL 6.59e-01 0.0338 0.0764 0.314 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 519028 sc-eQTL 9.09e-02 -0.115 0.0675 0.314 CD14_Mono LOneK1K
ENSG00000164442 CITED2 173125 sc-eQTL 5.64e-01 -0.043 0.0744 0.314 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 855225 sc-eQTL 5.22e-01 -0.0639 0.0996 0.314 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 774264 sc-eQTL 9.41e-01 -0.00719 0.0976 0.317 CD16_Mono LOneK1K
ENSG00000112406 HECA 412693 sc-eQTL 6.13e-01 0.0422 0.0833 0.317 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 855202 sc-eQTL 6.76e-01 0.0388 0.0927 0.317 CD16_Mono LOneK1K
ENSG00000135597 REPS1 559512 sc-eQTL 9.76e-02 0.0954 0.0573 0.317 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 519028 sc-eQTL 3.16e-01 -0.0847 0.0843 0.317 CD16_Mono LOneK1K
ENSG00000164442 CITED2 173125 sc-eQTL 8.71e-01 0.0119 0.0728 0.317 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 855225 sc-eQTL 3.69e-01 -0.0921 0.102 0.317 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 774264 sc-eQTL 9.58e-01 -0.00455 0.086 0.315 NK_CD56dim LOneK1K
ENSG00000112406 HECA 412693 sc-eQTL 7.63e-01 0.0222 0.0733 0.315 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 559512 sc-eQTL 9.99e-01 5.45e-05 0.0717 0.315 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 519028 sc-eQTL 5.10e-01 -0.0305 0.0462 0.315 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 173125 sc-eQTL 1.74e-01 0.0908 0.0665 0.315 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000135540 NHSL1 855202 eQTL 0.00539 -0.0697 0.025 0.0 0.0 0.306

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000135540 NHSL1 855202 2.95e-07 1.11e-07 3.31e-08 1.89e-07 9.91e-08 9.9e-08 1.44e-07 5.35e-08 1.41e-07 4.24e-08 1.6e-07 8.02e-08 1.41e-07 6.21e-08 6e-08 8.01e-08 4.94e-08 1.14e-07 5.19e-08 4.42e-08 1.06e-07 1.3e-07 1.3e-07 4.82e-08 1.31e-07 1.15e-07 1.11e-07 8.7e-08 1.02e-07 1.1e-07 9.58e-08 3.8e-08 2.74e-08 8.49e-08 5.99e-08 4.12e-08 4.75e-08 9.13e-08 7.2e-08 3.87e-08 3.89e-08 1.37e-07 4.01e-08 2.04e-08 8.03e-08 1.7e-08 1.27e-07 4.6e-09 4.61e-08