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Genes within 1Mb (chr6:139498599:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 725090 sc-eQTL 4.63e-01 0.0586 0.0797 0.752 B L1
ENSG00000112406 HECA 363519 sc-eQTL 5.71e-01 -0.044 0.0775 0.752 B L1
ENSG00000135597 REPS1 510338 sc-eQTL 7.46e-01 -0.0222 0.0686 0.752 B L1
ENSG00000146386 ABRACL 469854 sc-eQTL 3.41e-01 0.0384 0.0402 0.752 B L1
ENSG00000164440 TXLNB 206601 sc-eQTL 7.39e-01 0.0329 0.0987 0.752 B L1
ENSG00000164442 CITED2 123951 sc-eQTL 7.74e-01 -0.0178 0.0622 0.752 B L1
ENSG00000226571 AL592429.2 227237 sc-eQTL 2.74e-01 0.0756 0.0689 0.752 B L1
ENSG00000024862 CCDC28A 725090 sc-eQTL 5.27e-01 0.0557 0.0879 0.752 CD4T L1
ENSG00000112406 HECA 363519 sc-eQTL 6.94e-01 -0.0289 0.0733 0.752 CD4T L1
ENSG00000135597 REPS1 510338 sc-eQTL 2.96e-01 0.0602 0.0575 0.752 CD4T L1
ENSG00000146386 ABRACL 469854 sc-eQTL 4.71e-01 0.0305 0.0422 0.752 CD4T L1
ENSG00000164442 CITED2 123951 sc-eQTL 9.63e-01 0.00336 0.0722 0.752 CD4T L1
ENSG00000231329 AL031772.1 258946 sc-eQTL 7.64e-01 -0.0214 0.0712 0.752 CD4T L1
ENSG00000024862 CCDC28A 725090 sc-eQTL 5.36e-01 0.0596 0.0961 0.752 CD8T L1
ENSG00000112406 HECA 363519 sc-eQTL 6.43e-01 -0.0319 0.0688 0.752 CD8T L1
ENSG00000135597 REPS1 510338 sc-eQTL 6.39e-01 0.0304 0.0647 0.752 CD8T L1
ENSG00000146386 ABRACL 469854 sc-eQTL 7.66e-01 0.011 0.0369 0.752 CD8T L1
ENSG00000164442 CITED2 123951 sc-eQTL 4.19e-01 -0.0566 0.0699 0.752 CD8T L1
ENSG00000231329 AL031772.1 258946 sc-eQTL 9.20e-01 -0.0086 0.085 0.752 CD8T L1
ENSG00000024862 CCDC28A 725090 sc-eQTL 3.34e-01 0.0924 0.0955 0.755 DC L1
ENSG00000112406 HECA 363519 sc-eQTL 2.20e-01 -0.0966 0.0785 0.755 DC L1
ENSG00000135540 NHSL1 806028 sc-eQTL 1.86e-01 -0.116 0.0874 0.755 DC L1
ENSG00000135597 REPS1 510338 sc-eQTL 3.58e-01 0.0714 0.0775 0.755 DC L1
ENSG00000146386 ABRACL 469854 sc-eQTL 6.09e-01 -0.0389 0.076 0.755 DC L1
ENSG00000164442 CITED2 123951 sc-eQTL 5.04e-01 -0.0604 0.0901 0.755 DC L1
ENSG00000225177 AL590617.2 806051 sc-eQTL 2.90e-01 0.0971 0.0915 0.755 DC L1
ENSG00000024862 CCDC28A 725090 sc-eQTL 3.16e-01 0.07 0.0695 0.752 Mono L1
ENSG00000112406 HECA 363519 sc-eQTL 8.48e-01 0.0122 0.0636 0.752 Mono L1
ENSG00000135540 NHSL1 806028 sc-eQTL 6.01e-01 0.0477 0.091 0.752 Mono L1
ENSG00000135597 REPS1 510338 sc-eQTL 6.48e-01 -0.0243 0.0533 0.752 Mono L1
ENSG00000146386 ABRACL 469854 sc-eQTL 7.96e-01 -0.0179 0.0694 0.752 Mono L1
ENSG00000164442 CITED2 123951 sc-eQTL 2.22e-01 -0.0896 0.0732 0.752 Mono L1
ENSG00000225177 AL590617.2 806051 sc-eQTL 4.18e-03 0.269 0.0929 0.752 Mono L1
ENSG00000024862 CCDC28A 725090 sc-eQTL 5.12e-01 0.0564 0.0859 0.753 NK L1
ENSG00000112406 HECA 363519 sc-eQTL 4.70e-01 -0.0537 0.0742 0.753 NK L1
ENSG00000135597 REPS1 510338 sc-eQTL 2.10e-01 -0.0886 0.0705 0.753 NK L1
ENSG00000146386 ABRACL 469854 sc-eQTL 6.31e-01 0.0248 0.0516 0.753 NK L1
ENSG00000164442 CITED2 123951 sc-eQTL 4.24e-01 -0.0549 0.0686 0.753 NK L1
ENSG00000024862 CCDC28A 725090 sc-eQTL 3.81e-01 0.0887 0.101 0.752 Other_T L1
ENSG00000112406 HECA 363519 sc-eQTL 7.02e-01 0.028 0.0733 0.752 Other_T L1
ENSG00000135597 REPS1 510338 sc-eQTL 5.36e-01 0.0488 0.0788 0.752 Other_T L1
ENSG00000146386 ABRACL 469854 sc-eQTL 4.70e-01 0.0373 0.0516 0.752 Other_T L1
ENSG00000164442 CITED2 123951 sc-eQTL 1.04e-01 -0.0981 0.0601 0.752 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 725090 sc-eQTL 1.41e-01 -0.161 0.109 0.755 B_Activated L2
ENSG00000112406 HECA 363519 sc-eQTL 4.94e-02 -0.204 0.103 0.755 B_Activated L2
ENSG00000135597 REPS1 510338 sc-eQTL 7.33e-01 0.0373 0.109 0.755 B_Activated L2
ENSG00000146386 ABRACL 469854 sc-eQTL 7.91e-01 -0.0262 0.0989 0.755 B_Activated L2
ENSG00000164440 TXLNB 206601 sc-eQTL 4.96e-02 -0.166 0.0837 0.755 B_Activated L2
ENSG00000164442 CITED2 123951 sc-eQTL 5.30e-02 0.205 0.105 0.755 B_Activated L2
ENSG00000226571 AL592429.2 227237 sc-eQTL 5.86e-02 0.201 0.105 0.755 B_Activated L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 8.58e-01 0.0174 0.0973 0.751 B_Intermediate L2
ENSG00000112406 HECA 363519 sc-eQTL 5.62e-01 0.0489 0.0842 0.751 B_Intermediate L2
ENSG00000135597 REPS1 510338 sc-eQTL 9.76e-01 -0.00278 0.0909 0.751 B_Intermediate L2
ENSG00000146386 ABRACL 469854 sc-eQTL 8.49e-01 -0.0147 0.0774 0.751 B_Intermediate L2
ENSG00000164440 TXLNB 206601 sc-eQTL 7.48e-01 0.0305 0.0948 0.751 B_Intermediate L2
ENSG00000164442 CITED2 123951 sc-eQTL 6.86e-01 -0.0353 0.0872 0.751 B_Intermediate L2
ENSG00000226571 AL592429.2 227237 sc-eQTL 9.79e-01 -0.00249 0.0945 0.751 B_Intermediate L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 8.72e-01 0.0158 0.0984 0.75 B_Memory L2
ENSG00000112406 HECA 363519 sc-eQTL 7.34e-01 0.029 0.085 0.75 B_Memory L2
ENSG00000135597 REPS1 510338 sc-eQTL 8.04e-01 0.0229 0.0922 0.75 B_Memory L2
ENSG00000146386 ABRACL 469854 sc-eQTL 9.75e-01 0.00229 0.0729 0.75 B_Memory L2
ENSG00000164440 TXLNB 206601 sc-eQTL 8.60e-01 0.0165 0.093 0.75 B_Memory L2
ENSG00000164442 CITED2 123951 sc-eQTL 9.49e-01 0.00547 0.0855 0.75 B_Memory L2
ENSG00000226571 AL592429.2 227237 sc-eQTL 2.01e-01 0.134 0.105 0.75 B_Memory L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 3.39e-01 0.0894 0.0933 0.752 B_Naive1 L2
ENSG00000112406 HECA 363519 sc-eQTL 6.76e-01 -0.0341 0.0815 0.752 B_Naive1 L2
ENSG00000135597 REPS1 510338 sc-eQTL 7.27e-01 -0.0264 0.0754 0.752 B_Naive1 L2
ENSG00000146386 ABRACL 469854 sc-eQTL 7.20e-01 0.019 0.0528 0.752 B_Naive1 L2
ENSG00000164440 TXLNB 206601 sc-eQTL 7.05e-01 0.0375 0.0988 0.752 B_Naive1 L2
ENSG00000164442 CITED2 123951 sc-eQTL 4.26e-01 -0.0573 0.0718 0.752 B_Naive1 L2
ENSG00000226571 AL592429.2 227237 sc-eQTL 7.48e-02 0.168 0.0936 0.752 B_Naive1 L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 6.31e-01 0.0441 0.0918 0.751 B_Naive2 L2
ENSG00000112406 HECA 363519 sc-eQTL 1.61e-01 -0.121 0.086 0.751 B_Naive2 L2
ENSG00000135597 REPS1 510338 sc-eQTL 6.37e-01 -0.039 0.0824 0.751 B_Naive2 L2
ENSG00000146386 ABRACL 469854 sc-eQTL 2.05e-01 0.0769 0.0605 0.751 B_Naive2 L2
ENSG00000164440 TXLNB 206601 sc-eQTL 3.01e-01 -0.0994 0.0959 0.751 B_Naive2 L2
ENSG00000164442 CITED2 123951 sc-eQTL 8.05e-01 0.0242 0.0981 0.751 B_Naive2 L2
ENSG00000226571 AL592429.2 227237 sc-eQTL 1.88e-01 0.119 0.0897 0.751 B_Naive2 L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 3.88e-01 0.0815 0.0941 0.745 CD4_CTL L2
ENSG00000112406 HECA 363519 sc-eQTL 3.56e-01 0.088 0.095 0.745 CD4_CTL L2
ENSG00000135597 REPS1 510338 sc-eQTL 8.95e-01 0.0122 0.0924 0.745 CD4_CTL L2
ENSG00000146386 ABRACL 469854 sc-eQTL 4.65e-01 -0.0616 0.0841 0.745 CD4_CTL L2
ENSG00000164442 CITED2 123951 sc-eQTL 9.62e-01 0.00402 0.0846 0.745 CD4_CTL L2
ENSG00000231329 AL031772.1 258946 sc-eQTL 9.75e-01 0.00279 0.0873 0.745 CD4_CTL L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 9.46e-01 -0.00623 0.0926 0.752 CD4_Naive L2
ENSG00000112406 HECA 363519 sc-eQTL 5.95e-01 -0.0383 0.0719 0.752 CD4_Naive L2
ENSG00000135597 REPS1 510338 sc-eQTL 5.31e-01 0.04 0.0638 0.752 CD4_Naive L2
ENSG00000146386 ABRACL 469854 sc-eQTL 1.42e-01 0.063 0.0428 0.752 CD4_Naive L2
ENSG00000164442 CITED2 123951 sc-eQTL 5.87e-01 0.0396 0.0729 0.752 CD4_Naive L2
ENSG00000231329 AL031772.1 258946 sc-eQTL 5.04e-01 -0.0493 0.0737 0.752 CD4_Naive L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 2.56e-01 0.102 0.0891 0.752 CD4_TCM L2
ENSG00000112406 HECA 363519 sc-eQTL 9.43e-01 -0.00516 0.0715 0.752 CD4_TCM L2
ENSG00000135597 REPS1 510338 sc-eQTL 2.00e-01 0.0868 0.0675 0.752 CD4_TCM L2
ENSG00000146386 ABRACL 469854 sc-eQTL 1.82e-01 0.0696 0.0519 0.752 CD4_TCM L2
ENSG00000164442 CITED2 123951 sc-eQTL 9.48e-01 -0.00503 0.0775 0.752 CD4_TCM L2
ENSG00000231329 AL031772.1 258946 sc-eQTL 8.90e-01 0.0116 0.0838 0.752 CD4_TCM L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 6.90e-01 0.0409 0.102 0.752 CD4_TEM L2
ENSG00000112406 HECA 363519 sc-eQTL 3.51e-01 0.0742 0.0794 0.752 CD4_TEM L2
ENSG00000135597 REPS1 510338 sc-eQTL 5.76e-01 0.0485 0.0866 0.752 CD4_TEM L2
ENSG00000146386 ABRACL 469854 sc-eQTL 3.78e-01 0.0545 0.0617 0.752 CD4_TEM L2
ENSG00000164442 CITED2 123951 sc-eQTL 1.40e-01 -0.12 0.0807 0.752 CD4_TEM L2
ENSG00000231329 AL031772.1 258946 sc-eQTL 2.54e-01 0.0968 0.0846 0.752 CD4_TEM L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 3.13e-01 0.108 0.106 0.752 CD8_CTL L2
ENSG00000112406 HECA 363519 sc-eQTL 6.71e-01 0.033 0.0776 0.752 CD8_CTL L2
ENSG00000135597 REPS1 510338 sc-eQTL 5.63e-01 0.0481 0.0831 0.752 CD8_CTL L2
ENSG00000146386 ABRACL 469854 sc-eQTL 9.26e-01 -0.00626 0.0673 0.752 CD8_CTL L2
ENSG00000164442 CITED2 123951 sc-eQTL 3.16e-01 -0.0785 0.0781 0.752 CD8_CTL L2
ENSG00000231329 AL031772.1 258946 sc-eQTL 2.65e-01 0.105 0.0937 0.752 CD8_CTL L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 4.76e-01 0.0711 0.0995 0.752 CD8_Naive L2
ENSG00000112406 HECA 363519 sc-eQTL 7.43e-01 -0.0252 0.0769 0.752 CD8_Naive L2
ENSG00000135597 REPS1 510338 sc-eQTL 3.41e-01 -0.0734 0.0769 0.752 CD8_Naive L2
ENSG00000146386 ABRACL 469854 sc-eQTL 6.04e-01 -0.021 0.0404 0.752 CD8_Naive L2
ENSG00000164442 CITED2 123951 sc-eQTL 9.36e-01 -0.00655 0.0818 0.752 CD8_Naive L2
ENSG00000231329 AL031772.1 258946 sc-eQTL 8.41e-01 -0.0188 0.0936 0.752 CD8_Naive L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 6.41e-01 0.0513 0.11 0.741 CD8_TCM L2
ENSG00000112406 HECA 363519 sc-eQTL 1.99e-01 -0.103 0.0801 0.741 CD8_TCM L2
ENSG00000135597 REPS1 510338 sc-eQTL 4.90e-01 -0.0577 0.0835 0.741 CD8_TCM L2
ENSG00000146386 ABRACL 469854 sc-eQTL 1.33e-01 -0.125 0.0828 0.741 CD8_TCM L2
ENSG00000164442 CITED2 123951 sc-eQTL 7.08e-01 0.0321 0.0855 0.741 CD8_TCM L2
ENSG00000231329 AL031772.1 258946 sc-eQTL 3.78e-01 -0.0797 0.0902 0.741 CD8_TCM L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 7.18e-01 -0.0369 0.102 0.749 CD8_TEM L2
ENSG00000112406 HECA 363519 sc-eQTL 5.96e-01 0.0506 0.0954 0.749 CD8_TEM L2
ENSG00000135597 REPS1 510338 sc-eQTL 5.50e-01 -0.0595 0.0993 0.749 CD8_TEM L2
ENSG00000146386 ABRACL 469854 sc-eQTL 3.21e-01 0.076 0.0764 0.749 CD8_TEM L2
ENSG00000164442 CITED2 123951 sc-eQTL 4.40e-01 -0.0643 0.0831 0.749 CD8_TEM L2
ENSG00000231329 AL031772.1 258946 sc-eQTL 6.39e-01 0.0444 0.0946 0.749 CD8_TEM L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 9.90e-01 0.00137 0.11 0.751 MAIT L2
ENSG00000112406 HECA 363519 sc-eQTL 2.09e-01 0.105 0.0833 0.751 MAIT L2
ENSG00000135597 REPS1 510338 sc-eQTL 9.53e-01 -0.00536 0.0901 0.751 MAIT L2
ENSG00000146386 ABRACL 469854 sc-eQTL 4.71e-01 0.0478 0.0662 0.751 MAIT L2
ENSG00000164442 CITED2 123951 sc-eQTL 6.94e-01 0.0308 0.078 0.751 MAIT L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 5.25e-01 -0.0635 0.0999 0.756 NK_CD56bright L2
ENSG00000112406 HECA 363519 sc-eQTL 3.22e-01 -0.0897 0.0904 0.756 NK_CD56bright L2
ENSG00000135597 REPS1 510338 sc-eQTL 6.57e-01 0.0376 0.0845 0.756 NK_CD56bright L2
ENSG00000146386 ABRACL 469854 sc-eQTL 7.25e-01 0.0274 0.0779 0.756 NK_CD56bright L2
ENSG00000164442 CITED2 123951 sc-eQTL 9.11e-02 -0.141 0.083 0.756 NK_CD56bright L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 7.24e-02 0.167 0.0925 0.754 NK_CD56dim L2
ENSG00000112406 HECA 363519 sc-eQTL 9.58e-01 0.00426 0.0802 0.754 NK_CD56dim L2
ENSG00000135597 REPS1 510338 sc-eQTL 6.69e-02 -0.139 0.0754 0.754 NK_CD56dim L2
ENSG00000146386 ABRACL 469854 sc-eQTL 7.03e-01 0.0197 0.0514 0.754 NK_CD56dim L2
ENSG00000164442 CITED2 123951 sc-eQTL 6.87e-01 -0.0277 0.0686 0.754 NK_CD56dim L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 1.40e-01 -0.158 0.106 0.763 NK_HLA L2
ENSG00000112406 HECA 363519 sc-eQTL 5.18e-01 -0.0646 0.0998 0.763 NK_HLA L2
ENSG00000135597 REPS1 510338 sc-eQTL 3.81e-01 0.0864 0.0985 0.763 NK_HLA L2
ENSG00000146386 ABRACL 469854 sc-eQTL 9.23e-01 0.00788 0.0811 0.763 NK_HLA L2
ENSG00000164442 CITED2 123951 sc-eQTL 9.17e-01 -0.00905 0.0866 0.763 NK_HLA L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 2.78e-01 0.104 0.0954 0.754 NK_cytokine L2
ENSG00000112406 HECA 363519 sc-eQTL 2.07e-01 -0.104 0.0821 0.754 NK_cytokine L2
ENSG00000135597 REPS1 510338 sc-eQTL 6.22e-01 -0.042 0.085 0.754 NK_cytokine L2
ENSG00000146386 ABRACL 469854 sc-eQTL 4.34e-01 0.0429 0.0547 0.754 NK_cytokine L2
ENSG00000164442 CITED2 123951 sc-eQTL 2.51e-01 -0.082 0.0713 0.754 NK_cytokine L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 4.54e-01 0.0879 0.117 0.793 PB L2
ENSG00000112406 HECA 363519 sc-eQTL 4.69e-01 0.0926 0.127 0.793 PB L2
ENSG00000135597 REPS1 510338 sc-eQTL 9.54e-01 -0.0065 0.113 0.793 PB L2
ENSG00000146386 ABRACL 469854 sc-eQTL 8.55e-01 -0.0146 0.0794 0.793 PB L2
ENSG00000164440 TXLNB 206601 sc-eQTL 4.26e-01 -0.0925 0.116 0.793 PB L2
ENSG00000164442 CITED2 123951 sc-eQTL 8.40e-01 0.0176 0.0873 0.793 PB L2
ENSG00000226571 AL592429.2 227237 sc-eQTL 7.99e-01 -0.0299 0.117 0.793 PB L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 6.39e-02 0.194 0.104 0.75 Pro_T L2
ENSG00000112406 HECA 363519 sc-eQTL 2.64e-01 -0.0921 0.0823 0.75 Pro_T L2
ENSG00000135597 REPS1 510338 sc-eQTL 5.14e-01 0.0634 0.0971 0.75 Pro_T L2
ENSG00000146386 ABRACL 469854 sc-eQTL 6.82e-01 -0.0257 0.0627 0.75 Pro_T L2
ENSG00000164442 CITED2 123951 sc-eQTL 8.65e-02 -0.128 0.0742 0.75 Pro_T L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 3.39e-01 0.0935 0.0977 0.752 Treg L2
ENSG00000112406 HECA 363519 sc-eQTL 5.93e-01 -0.0435 0.0813 0.752 Treg L2
ENSG00000135597 REPS1 510338 sc-eQTL 8.38e-01 0.0172 0.0842 0.752 Treg L2
ENSG00000146386 ABRACL 469854 sc-eQTL 6.76e-01 0.03 0.0717 0.752 Treg L2
ENSG00000164442 CITED2 123951 sc-eQTL 9.65e-01 -0.00356 0.08 0.752 Treg L2
ENSG00000231329 AL031772.1 258946 sc-eQTL 1.47e-01 -0.133 0.0911 0.752 Treg L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 6.39e-01 0.0455 0.0969 0.749 cDC L2
ENSG00000112406 HECA 363519 sc-eQTL 2.16e-01 -0.114 0.0918 0.749 cDC L2
ENSG00000135540 NHSL1 806028 sc-eQTL 1.68e-01 -0.124 0.0897 0.749 cDC L2
ENSG00000135597 REPS1 510338 sc-eQTL 9.46e-01 -0.00711 0.104 0.749 cDC L2
ENSG00000146386 ABRACL 469854 sc-eQTL 4.82e-01 0.0598 0.0849 0.749 cDC L2
ENSG00000164442 CITED2 123951 sc-eQTL 4.15e-02 -0.183 0.0891 0.749 cDC L2
ENSG00000225177 AL590617.2 806051 sc-eQTL 1.42e-01 0.146 0.0989 0.749 cDC L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 5.31e-02 0.147 0.0756 0.752 cMono_IL1B L2
ENSG00000112406 HECA 363519 sc-eQTL 6.67e-01 -0.0271 0.063 0.752 cMono_IL1B L2
ENSG00000135540 NHSL1 806028 sc-eQTL 5.62e-01 -0.0532 0.0917 0.752 cMono_IL1B L2
ENSG00000135597 REPS1 510338 sc-eQTL 7.52e-01 -0.0259 0.0819 0.752 cMono_IL1B L2
ENSG00000146386 ABRACL 469854 sc-eQTL 1.77e-01 -0.0929 0.0686 0.752 cMono_IL1B L2
ENSG00000164442 CITED2 123951 sc-eQTL 5.92e-02 -0.135 0.0714 0.752 cMono_IL1B L2
ENSG00000225177 AL590617.2 806051 sc-eQTL 6.79e-02 0.175 0.0953 0.752 cMono_IL1B L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 4.38e-01 0.0683 0.0878 0.752 cMono_S100A L2
ENSG00000112406 HECA 363519 sc-eQTL 5.48e-01 0.0447 0.0743 0.752 cMono_S100A L2
ENSG00000135540 NHSL1 806028 sc-eQTL 5.64e-02 0.179 0.0934 0.752 cMono_S100A L2
ENSG00000135597 REPS1 510338 sc-eQTL 6.24e-01 -0.0438 0.0891 0.752 cMono_S100A L2
ENSG00000146386 ABRACL 469854 sc-eQTL 5.90e-01 0.0418 0.0774 0.752 cMono_S100A L2
ENSG00000164442 CITED2 123951 sc-eQTL 5.50e-01 -0.0459 0.0766 0.752 cMono_S100A L2
ENSG00000225177 AL590617.2 806051 sc-eQTL 9.84e-03 0.265 0.102 0.752 cMono_S100A L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 5.83e-01 0.0634 0.115 0.752 gdT L2
ENSG00000112406 HECA 363519 sc-eQTL 5.90e-01 -0.059 0.109 0.752 gdT L2
ENSG00000135597 REPS1 510338 sc-eQTL 4.01e-01 0.0952 0.113 0.752 gdT L2
ENSG00000146386 ABRACL 469854 sc-eQTL 7.15e-02 0.153 0.0843 0.752 gdT L2
ENSG00000164442 CITED2 123951 sc-eQTL 2.15e-01 -0.122 0.0977 0.752 gdT L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 8.70e-01 -0.0169 0.103 0.753 intMono L2
ENSG00000112406 HECA 363519 sc-eQTL 8.28e-01 0.0185 0.0846 0.753 intMono L2
ENSG00000135540 NHSL1 806028 sc-eQTL 6.92e-01 -0.0371 0.0933 0.753 intMono L2
ENSG00000135597 REPS1 510338 sc-eQTL 9.90e-01 -0.00124 0.0964 0.753 intMono L2
ENSG00000146386 ABRACL 469854 sc-eQTL 9.77e-01 -0.00251 0.088 0.753 intMono L2
ENSG00000164442 CITED2 123951 sc-eQTL 6.68e-01 -0.0367 0.0854 0.753 intMono L2
ENSG00000225177 AL590617.2 806051 sc-eQTL 1.66e-02 0.249 0.103 0.753 intMono L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 5.57e-01 -0.0548 0.0932 0.742 ncMono L2
ENSG00000112406 HECA 363519 sc-eQTL 5.80e-01 0.0472 0.0852 0.742 ncMono L2
ENSG00000135540 NHSL1 806028 sc-eQTL 9.44e-01 0.00626 0.0896 0.742 ncMono L2
ENSG00000135597 REPS1 510338 sc-eQTL 3.03e-01 0.0696 0.0674 0.742 ncMono L2
ENSG00000146386 ABRACL 469854 sc-eQTL 3.58e-01 -0.0748 0.0812 0.742 ncMono L2
ENSG00000164442 CITED2 123951 sc-eQTL 4.30e-01 -0.0546 0.069 0.742 ncMono L2
ENSG00000225177 AL590617.2 806051 sc-eQTL 6.42e-01 0.0464 0.0995 0.742 ncMono L2
ENSG00000024862 CCDC28A 725090 sc-eQTL 2.91e-01 0.115 0.108 0.746 pDC L2
ENSG00000112406 HECA 363519 sc-eQTL 7.98e-01 -0.0236 0.092 0.746 pDC L2
ENSG00000135540 NHSL1 806028 sc-eQTL 9.37e-01 0.00663 0.0841 0.746 pDC L2
ENSG00000135597 REPS1 510338 sc-eQTL 5.31e-01 0.0534 0.0851 0.746 pDC L2
ENSG00000146386 ABRACL 469854 sc-eQTL 9.06e-01 -0.0111 0.0931 0.746 pDC L2
ENSG00000164442 CITED2 123951 sc-eQTL 8.05e-01 0.0271 0.109 0.746 pDC L2
ENSG00000225177 AL590617.2 806051 sc-eQTL 6.10e-01 0.0432 0.0844 0.746 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 725090 sc-eQTL 7.73e-01 0.0275 0.0949 0.752 B_Memory LOneK1K
ENSG00000112406 HECA 363519 sc-eQTL 4.81e-01 -0.0595 0.0843 0.752 B_Memory LOneK1K
ENSG00000135597 REPS1 510338 sc-eQTL 9.69e-01 -0.00336 0.0875 0.752 B_Memory LOneK1K
ENSG00000146386 ABRACL 469854 sc-eQTL 5.53e-01 -0.036 0.0606 0.752 B_Memory LOneK1K
ENSG00000164440 TXLNB 206601 sc-eQTL 6.82e-01 0.0412 0.1 0.752 B_Memory LOneK1K
ENSG00000164442 CITED2 123951 sc-eQTL 9.51e-01 -0.00526 0.0852 0.752 B_Memory LOneK1K
ENSG00000226571 AL592429.2 227237 sc-eQTL 5.93e-01 0.053 0.099 0.752 B_Memory LOneK1K
ENSG00000024862 CCDC28A 725090 sc-eQTL 2.97e-01 0.0909 0.0869 0.752 B_Naive LOneK1K
ENSG00000112406 HECA 363519 sc-eQTL 4.52e-01 -0.0612 0.0813 0.752 B_Naive LOneK1K
ENSG00000135597 REPS1 510338 sc-eQTL 7.15e-01 -0.0254 0.0694 0.752 B_Naive LOneK1K
ENSG00000146386 ABRACL 469854 sc-eQTL 3.82e-01 0.0426 0.0486 0.752 B_Naive LOneK1K
ENSG00000164440 TXLNB 206601 sc-eQTL 9.73e-01 -0.0035 0.102 0.752 B_Naive LOneK1K
ENSG00000164442 CITED2 123951 sc-eQTL 5.29e-01 -0.0467 0.074 0.752 B_Naive LOneK1K
ENSG00000226571 AL592429.2 227237 sc-eQTL 4.43e-02 0.174 0.0862 0.752 B_Naive LOneK1K
ENSG00000024862 CCDC28A 725090 sc-eQTL 8.69e-02 0.12 0.0699 0.752 CD14_Mono LOneK1K
ENSG00000112406 HECA 363519 sc-eQTL 9.24e-01 0.00606 0.0631 0.752 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 806028 sc-eQTL 7.56e-01 0.0287 0.0922 0.752 CD14_Mono LOneK1K
ENSG00000135597 REPS1 510338 sc-eQTL 4.15e-01 -0.0618 0.0758 0.752 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 469854 sc-eQTL 4.79e-01 -0.0479 0.0674 0.752 CD14_Mono LOneK1K
ENSG00000164442 CITED2 123951 sc-eQTL 1.40e-01 -0.109 0.0735 0.752 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 806051 sc-eQTL 3.42e-03 0.287 0.097 0.752 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 725090 sc-eQTL 8.19e-01 -0.0215 0.0939 0.752 CD16_Mono LOneK1K
ENSG00000112406 HECA 363519 sc-eQTL 8.02e-01 0.0201 0.0802 0.752 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 806028 sc-eQTL 5.40e-01 -0.0546 0.0891 0.752 CD16_Mono LOneK1K
ENSG00000135597 REPS1 510338 sc-eQTL 6.97e-01 0.0216 0.0555 0.752 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 469854 sc-eQTL 6.00e-01 -0.0427 0.0812 0.752 CD16_Mono LOneK1K
ENSG00000164442 CITED2 123951 sc-eQTL 5.11e-01 -0.046 0.0699 0.752 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 806051 sc-eQTL 1.51e-02 0.238 0.0972 0.752 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 725090 sc-eQTL 3.30e-01 0.087 0.0891 0.754 NK_CD56dim LOneK1K
ENSG00000112406 HECA 363519 sc-eQTL 6.36e-01 -0.0361 0.0762 0.754 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 510338 sc-eQTL 1.69e-01 -0.102 0.0741 0.754 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 469854 sc-eQTL 6.50e-01 0.0218 0.048 0.754 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 123951 sc-eQTL 5.96e-01 -0.0369 0.0694 0.754 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000135540 NHSL1 806028 eQTL 0.0442 -0.0554 0.0275 0.0 0.0 0.231
ENSG00000135597 REPS1 510338 pQTL 0.0126 0.0718 0.0287 0.00158 0.0 0.232

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina