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Genes within 1Mb (chr6:139479169:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 705660 sc-eQTL 1.50e-01 0.111 0.0767 0.748 B L1
ENSG00000112406 HECA 344089 sc-eQTL 9.54e-01 0.00436 0.075 0.748 B L1
ENSG00000135597 REPS1 490908 sc-eQTL 2.12e-01 0.0827 0.066 0.748 B L1
ENSG00000146386 ABRACL 450424 sc-eQTL 4.99e-01 0.0263 0.0389 0.748 B L1
ENSG00000164440 TXLNB 187171 sc-eQTL 7.04e-01 0.0363 0.0954 0.748 B L1
ENSG00000164442 CITED2 104521 sc-eQTL 2.18e-01 0.074 0.0599 0.748 B L1
ENSG00000226571 AL592429.2 207807 sc-eQTL 6.90e-01 0.0267 0.0668 0.748 B L1
ENSG00000024862 CCDC28A 705660 sc-eQTL 3.14e-01 0.0858 0.085 0.748 CD4T L1
ENSG00000112406 HECA 344089 sc-eQTL 3.43e-01 0.0673 0.0709 0.748 CD4T L1
ENSG00000135597 REPS1 490908 sc-eQTL 5.24e-01 0.0356 0.0558 0.748 CD4T L1
ENSG00000146386 ABRACL 450424 sc-eQTL 5.99e-01 -0.0215 0.0409 0.748 CD4T L1
ENSG00000164442 CITED2 104521 sc-eQTL 8.91e-01 -0.00956 0.0699 0.748 CD4T L1
ENSG00000231329 AL031772.1 239516 sc-eQTL 7.95e-01 0.0179 0.0689 0.748 CD4T L1
ENSG00000024862 CCDC28A 705660 sc-eQTL 1.69e-01 0.13 0.0941 0.748 CD8T L1
ENSG00000112406 HECA 344089 sc-eQTL 5.89e-01 -0.0366 0.0676 0.748 CD8T L1
ENSG00000135597 REPS1 490908 sc-eQTL 5.58e-01 0.0374 0.0636 0.748 CD8T L1
ENSG00000146386 ABRACL 450424 sc-eQTL 8.87e-01 -0.00516 0.0362 0.748 CD8T L1
ENSG00000164442 CITED2 104521 sc-eQTL 1.94e-01 -0.0893 0.0685 0.748 CD8T L1
ENSG00000231329 AL031772.1 239516 sc-eQTL 8.44e-01 0.0165 0.0836 0.748 CD8T L1
ENSG00000024862 CCDC28A 705660 sc-eQTL 7.31e-01 0.0326 0.0945 0.755 DC L1
ENSG00000112406 HECA 344089 sc-eQTL 3.13e-01 -0.0786 0.0777 0.755 DC L1
ENSG00000135540 NHSL1 786598 sc-eQTL 5.50e-01 -0.0518 0.0866 0.755 DC L1
ENSG00000135597 REPS1 490908 sc-eQTL 9.53e-01 0.00449 0.0767 0.755 DC L1
ENSG00000146386 ABRACL 450424 sc-eQTL 4.85e-01 -0.0525 0.075 0.755 DC L1
ENSG00000164442 CITED2 104521 sc-eQTL 4.31e-01 -0.0701 0.0889 0.755 DC L1
ENSG00000225177 AL590617.2 786621 sc-eQTL 3.67e-01 0.0818 0.0904 0.755 DC L1
ENSG00000024862 CCDC28A 705660 sc-eQTL 7.16e-01 0.0246 0.0675 0.748 Mono L1
ENSG00000112406 HECA 344089 sc-eQTL 2.05e-01 0.0781 0.0614 0.748 Mono L1
ENSG00000135540 NHSL1 786598 sc-eQTL 8.98e-01 0.0113 0.0882 0.748 Mono L1
ENSG00000135597 REPS1 490908 sc-eQTL 5.19e-02 -0.1 0.0512 0.748 Mono L1
ENSG00000146386 ABRACL 450424 sc-eQTL 6.68e-01 0.0289 0.0672 0.748 Mono L1
ENSG00000164442 CITED2 104521 sc-eQTL 6.71e-01 -0.0302 0.0711 0.748 Mono L1
ENSG00000225177 AL590617.2 786621 sc-eQTL 1.16e-01 0.144 0.0912 0.748 Mono L1
ENSG00000024862 CCDC28A 705660 sc-eQTL 4.01e-01 0.0707 0.084 0.751 NK L1
ENSG00000112406 HECA 344089 sc-eQTL 3.15e-01 -0.0731 0.0726 0.751 NK L1
ENSG00000135597 REPS1 490908 sc-eQTL 8.39e-01 -0.0141 0.0693 0.751 NK L1
ENSG00000146386 ABRACL 450424 sc-eQTL 5.73e-01 0.0285 0.0505 0.751 NK L1
ENSG00000164442 CITED2 104521 sc-eQTL 5.78e-01 -0.0375 0.0672 0.751 NK L1
ENSG00000024862 CCDC28A 705660 sc-eQTL 1.09e-01 0.161 0.0999 0.748 Other_T L1
ENSG00000112406 HECA 344089 sc-eQTL 3.18e-01 0.0727 0.0726 0.748 Other_T L1
ENSG00000135597 REPS1 490908 sc-eQTL 5.78e-01 -0.0436 0.0782 0.748 Other_T L1
ENSG00000146386 ABRACL 450424 sc-eQTL 1.82e-01 0.0683 0.051 0.748 Other_T L1
ENSG00000164442 CITED2 104521 sc-eQTL 1.22e-02 -0.149 0.0591 0.748 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 705660 sc-eQTL 9.20e-02 -0.178 0.105 0.732 B_Activated L2
ENSG00000112406 HECA 344089 sc-eQTL 9.74e-01 0.00333 0.101 0.732 B_Activated L2
ENSG00000135597 REPS1 490908 sc-eQTL 5.08e-01 0.0701 0.106 0.732 B_Activated L2
ENSG00000146386 ABRACL 450424 sc-eQTL 8.19e-01 -0.0219 0.0958 0.732 B_Activated L2
ENSG00000164440 TXLNB 187171 sc-eQTL 5.92e-01 0.044 0.082 0.732 B_Activated L2
ENSG00000164442 CITED2 104521 sc-eQTL 1.89e-01 0.135 0.103 0.732 B_Activated L2
ENSG00000226571 AL592429.2 207807 sc-eQTL 8.95e-01 0.0136 0.103 0.732 B_Activated L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 3.27e-01 0.094 0.0956 0.747 B_Intermediate L2
ENSG00000112406 HECA 344089 sc-eQTL 2.35e-01 0.0985 0.0828 0.747 B_Intermediate L2
ENSG00000135597 REPS1 490908 sc-eQTL 3.90e-01 0.077 0.0894 0.747 B_Intermediate L2
ENSG00000146386 ABRACL 450424 sc-eQTL 4.83e-01 0.0535 0.0762 0.747 B_Intermediate L2
ENSG00000164440 TXLNB 187171 sc-eQTL 2.42e-01 0.109 0.0931 0.747 B_Intermediate L2
ENSG00000164442 CITED2 104521 sc-eQTL 6.11e-02 0.16 0.0852 0.747 B_Intermediate L2
ENSG00000226571 AL592429.2 207807 sc-eQTL 2.45e-01 0.108 0.0928 0.747 B_Intermediate L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 3.12e-01 0.0987 0.0975 0.746 B_Memory L2
ENSG00000112406 HECA 344089 sc-eQTL 9.67e-01 0.00354 0.0845 0.746 B_Memory L2
ENSG00000135597 REPS1 490908 sc-eQTL 3.15e-01 0.0921 0.0914 0.746 B_Memory L2
ENSG00000146386 ABRACL 450424 sc-eQTL 3.80e-01 -0.0636 0.0723 0.746 B_Memory L2
ENSG00000164440 TXLNB 187171 sc-eQTL 4.99e-01 -0.0626 0.0923 0.746 B_Memory L2
ENSG00000164442 CITED2 104521 sc-eQTL 5.02e-01 0.0571 0.0848 0.746 B_Memory L2
ENSG00000226571 AL592429.2 207807 sc-eQTL 8.43e-01 -0.0207 0.104 0.746 B_Memory L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 3.19e-01 0.0933 0.0933 0.748 B_Naive1 L2
ENSG00000112406 HECA 344089 sc-eQTL 5.18e-01 -0.0528 0.0815 0.748 B_Naive1 L2
ENSG00000135597 REPS1 490908 sc-eQTL 6.71e-01 0.0321 0.0754 0.748 B_Naive1 L2
ENSG00000146386 ABRACL 450424 sc-eQTL 7.02e-01 -0.0202 0.0528 0.748 B_Naive1 L2
ENSG00000164440 TXLNB 187171 sc-eQTL 9.96e-01 -0.000525 0.0988 0.748 B_Naive1 L2
ENSG00000164442 CITED2 104521 sc-eQTL 3.98e-01 0.0609 0.0718 0.748 B_Naive1 L2
ENSG00000226571 AL592429.2 207807 sc-eQTL 8.77e-01 -0.0146 0.0944 0.748 B_Naive1 L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 9.26e-01 0.00837 0.0902 0.747 B_Naive2 L2
ENSG00000112406 HECA 344089 sc-eQTL 2.53e-01 -0.097 0.0846 0.747 B_Naive2 L2
ENSG00000135597 REPS1 490908 sc-eQTL 2.41e-01 0.095 0.0807 0.747 B_Naive2 L2
ENSG00000146386 ABRACL 450424 sc-eQTL 3.65e-01 0.0541 0.0595 0.747 B_Naive2 L2
ENSG00000164440 TXLNB 187171 sc-eQTL 5.02e-01 -0.0635 0.0943 0.747 B_Naive2 L2
ENSG00000164442 CITED2 104521 sc-eQTL 4.34e-01 0.0754 0.0962 0.747 B_Naive2 L2
ENSG00000226571 AL592429.2 207807 sc-eQTL 7.60e-01 0.0271 0.0884 0.747 B_Naive2 L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 3.55e-01 -0.0854 0.0921 0.752 CD4_CTL L2
ENSG00000112406 HECA 344089 sc-eQTL 9.74e-02 0.154 0.0925 0.752 CD4_CTL L2
ENSG00000135597 REPS1 490908 sc-eQTL 4.75e-01 0.0647 0.0903 0.752 CD4_CTL L2
ENSG00000146386 ABRACL 450424 sc-eQTL 6.92e-01 -0.0327 0.0824 0.752 CD4_CTL L2
ENSG00000164442 CITED2 104521 sc-eQTL 3.96e-01 0.0704 0.0827 0.752 CD4_CTL L2
ENSG00000231329 AL031772.1 239516 sc-eQTL 7.97e-01 -0.022 0.0854 0.752 CD4_CTL L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 6.35e-01 0.0425 0.0894 0.748 CD4_Naive L2
ENSG00000112406 HECA 344089 sc-eQTL 7.11e-01 0.0258 0.0695 0.748 CD4_Naive L2
ENSG00000135597 REPS1 490908 sc-eQTL 7.61e-01 0.0188 0.0617 0.748 CD4_Naive L2
ENSG00000146386 ABRACL 450424 sc-eQTL 2.02e-01 -0.0529 0.0414 0.748 CD4_Naive L2
ENSG00000164442 CITED2 104521 sc-eQTL 7.82e-01 0.0195 0.0705 0.748 CD4_Naive L2
ENSG00000231329 AL031772.1 239516 sc-eQTL 2.44e-01 -0.083 0.0711 0.748 CD4_Naive L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 8.11e-02 0.153 0.0876 0.748 CD4_TCM L2
ENSG00000112406 HECA 344089 sc-eQTL 7.17e-01 0.0256 0.0705 0.748 CD4_TCM L2
ENSG00000135597 REPS1 490908 sc-eQTL 3.11e-01 0.0678 0.0667 0.748 CD4_TCM L2
ENSG00000146386 ABRACL 450424 sc-eQTL 7.52e-01 0.0163 0.0514 0.748 CD4_TCM L2
ENSG00000164442 CITED2 104521 sc-eQTL 4.22e-01 -0.0615 0.0764 0.748 CD4_TCM L2
ENSG00000231329 AL031772.1 239516 sc-eQTL 2.42e-01 0.0967 0.0824 0.748 CD4_TCM L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 2.11e-01 0.124 0.0987 0.748 CD4_TEM L2
ENSG00000112406 HECA 344089 sc-eQTL 2.25e-01 0.0934 0.0768 0.748 CD4_TEM L2
ENSG00000135597 REPS1 490908 sc-eQTL 8.16e-01 0.0195 0.084 0.748 CD4_TEM L2
ENSG00000146386 ABRACL 450424 sc-eQTL 7.28e-02 0.107 0.0594 0.748 CD4_TEM L2
ENSG00000164442 CITED2 104521 sc-eQTL 8.72e-01 0.0127 0.0786 0.748 CD4_TEM L2
ENSG00000231329 AL031772.1 239516 sc-eQTL 3.44e-01 0.0779 0.0821 0.748 CD4_TEM L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 5.69e-02 0.194 0.101 0.748 CD8_CTL L2
ENSG00000112406 HECA 344089 sc-eQTL 9.71e-01 0.00267 0.0744 0.748 CD8_CTL L2
ENSG00000135597 REPS1 490908 sc-eQTL 6.06e-01 0.0412 0.0796 0.748 CD8_CTL L2
ENSG00000146386 ABRACL 450424 sc-eQTL 8.29e-01 -0.0139 0.0644 0.748 CD8_CTL L2
ENSG00000164442 CITED2 104521 sc-eQTL 7.14e-01 -0.0276 0.075 0.748 CD8_CTL L2
ENSG00000231329 AL031772.1 239516 sc-eQTL 1.65e-01 0.125 0.0896 0.748 CD8_CTL L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 5.94e-01 0.0524 0.0983 0.748 CD8_Naive L2
ENSG00000112406 HECA 344089 sc-eQTL 5.37e-01 0.0469 0.0758 0.748 CD8_Naive L2
ENSG00000135597 REPS1 490908 sc-eQTL 7.74e-01 0.0219 0.0761 0.748 CD8_Naive L2
ENSG00000146386 ABRACL 450424 sc-eQTL 6.30e-01 -0.0193 0.0399 0.748 CD8_Naive L2
ENSG00000164442 CITED2 104521 sc-eQTL 7.76e-01 -0.023 0.0807 0.748 CD8_Naive L2
ENSG00000231329 AL031772.1 239516 sc-eQTL 3.44e-01 0.0874 0.0922 0.748 CD8_Naive L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 7.97e-01 -0.0278 0.108 0.75 CD8_TCM L2
ENSG00000112406 HECA 344089 sc-eQTL 6.92e-01 0.0312 0.0787 0.75 CD8_TCM L2
ENSG00000135597 REPS1 490908 sc-eQTL 8.11e-01 0.0196 0.0818 0.75 CD8_TCM L2
ENSG00000146386 ABRACL 450424 sc-eQTL 5.20e-01 -0.0525 0.0815 0.75 CD8_TCM L2
ENSG00000164442 CITED2 104521 sc-eQTL 7.75e-02 -0.147 0.0831 0.75 CD8_TCM L2
ENSG00000231329 AL031772.1 239516 sc-eQTL 1.77e-01 0.119 0.088 0.75 CD8_TCM L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 6.09e-02 -0.184 0.0975 0.737 CD8_TEM L2
ENSG00000112406 HECA 344089 sc-eQTL 2.06e-01 -0.116 0.0917 0.737 CD8_TEM L2
ENSG00000135597 REPS1 490908 sc-eQTL 3.40e-01 -0.0916 0.0957 0.737 CD8_TEM L2
ENSG00000146386 ABRACL 450424 sc-eQTL 1.29e-01 0.112 0.0735 0.737 CD8_TEM L2
ENSG00000164442 CITED2 104521 sc-eQTL 9.35e-01 -0.00655 0.0803 0.737 CD8_TEM L2
ENSG00000231329 AL031772.1 239516 sc-eQTL 9.38e-01 0.00707 0.0913 0.737 CD8_TEM L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 8.56e-01 0.0197 0.108 0.747 MAIT L2
ENSG00000112406 HECA 344089 sc-eQTL 1.99e-01 0.106 0.082 0.747 MAIT L2
ENSG00000135597 REPS1 490908 sc-eQTL 1.58e-01 -0.125 0.0883 0.747 MAIT L2
ENSG00000146386 ABRACL 450424 sc-eQTL 8.71e-01 0.0106 0.0652 0.747 MAIT L2
ENSG00000164442 CITED2 104521 sc-eQTL 4.71e-01 -0.0554 0.0767 0.747 MAIT L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 4.69e-01 -0.0733 0.101 0.749 NK_CD56bright L2
ENSG00000112406 HECA 344089 sc-eQTL 7.25e-01 0.0323 0.0916 0.749 NK_CD56bright L2
ENSG00000135597 REPS1 490908 sc-eQTL 6.84e-01 0.0348 0.0855 0.749 NK_CD56bright L2
ENSG00000146386 ABRACL 450424 sc-eQTL 6.87e-01 -0.0318 0.0787 0.749 NK_CD56bright L2
ENSG00000164442 CITED2 104521 sc-eQTL 4.34e-01 -0.0661 0.0844 0.749 NK_CD56bright L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 5.10e-02 0.177 0.0901 0.75 NK_CD56dim L2
ENSG00000112406 HECA 344089 sc-eQTL 8.95e-01 -0.0103 0.0782 0.75 NK_CD56dim L2
ENSG00000135597 REPS1 490908 sc-eQTL 1.43e-01 -0.108 0.0738 0.75 NK_CD56dim L2
ENSG00000146386 ABRACL 450424 sc-eQTL 1.87e-01 0.0662 0.05 0.75 NK_CD56dim L2
ENSG00000164442 CITED2 104521 sc-eQTL 9.49e-01 0.00426 0.0669 0.75 NK_CD56dim L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 2.91e-01 -0.112 0.105 0.749 NK_HLA L2
ENSG00000112406 HECA 344089 sc-eQTL 7.07e-01 -0.0372 0.0987 0.749 NK_HLA L2
ENSG00000135597 REPS1 490908 sc-eQTL 6.51e-01 0.0442 0.0974 0.749 NK_HLA L2
ENSG00000146386 ABRACL 450424 sc-eQTL 5.62e-01 -0.0466 0.0801 0.749 NK_HLA L2
ENSG00000164442 CITED2 104521 sc-eQTL 7.38e-01 -0.0286 0.0856 0.749 NK_HLA L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 6.30e-01 0.0454 0.0943 0.75 NK_cytokine L2
ENSG00000112406 HECA 344089 sc-eQTL 7.17e-02 -0.146 0.0806 0.75 NK_cytokine L2
ENSG00000135597 REPS1 490908 sc-eQTL 8.69e-01 -0.0138 0.0839 0.75 NK_cytokine L2
ENSG00000146386 ABRACL 450424 sc-eQTL 3.23e-01 0.0534 0.0539 0.75 NK_cytokine L2
ENSG00000164442 CITED2 104521 sc-eQTL 2.53e-01 -0.0806 0.0703 0.75 NK_cytokine L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 4.24e-01 0.0898 0.112 0.763 PB L2
ENSG00000112406 HECA 344089 sc-eQTL 6.15e-03 0.33 0.118 0.763 PB L2
ENSG00000135597 REPS1 490908 sc-eQTL 4.80e-01 -0.0767 0.108 0.763 PB L2
ENSG00000146386 ABRACL 450424 sc-eQTL 3.61e-01 0.0695 0.0757 0.763 PB L2
ENSG00000164440 TXLNB 187171 sc-eQTL 7.09e-01 -0.0415 0.111 0.763 PB L2
ENSG00000164442 CITED2 104521 sc-eQTL 5.68e-01 -0.0478 0.0834 0.763 PB L2
ENSG00000226571 AL592429.2 207807 sc-eQTL 9.75e-01 0.00353 0.112 0.763 PB L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 9.42e-01 0.00744 0.102 0.75 Pro_T L2
ENSG00000112406 HECA 344089 sc-eQTL 8.69e-01 0.0133 0.0807 0.75 Pro_T L2
ENSG00000135597 REPS1 490908 sc-eQTL 6.89e-01 -0.038 0.095 0.75 Pro_T L2
ENSG00000146386 ABRACL 450424 sc-eQTL 7.44e-01 0.02 0.0613 0.75 Pro_T L2
ENSG00000164442 CITED2 104521 sc-eQTL 5.89e-01 -0.0394 0.0729 0.75 Pro_T L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 6.80e-01 -0.0395 0.0956 0.748 Treg L2
ENSG00000112406 HECA 344089 sc-eQTL 1.37e-01 0.118 0.079 0.748 Treg L2
ENSG00000135597 REPS1 490908 sc-eQTL 6.93e-01 0.0325 0.0822 0.748 Treg L2
ENSG00000146386 ABRACL 450424 sc-eQTL 4.01e-01 0.0588 0.0699 0.748 Treg L2
ENSG00000164442 CITED2 104521 sc-eQTL 7.39e-01 0.0261 0.0782 0.748 Treg L2
ENSG00000231329 AL031772.1 239516 sc-eQTL 9.65e-01 0.00392 0.0894 0.748 Treg L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 2.61e-01 0.109 0.0967 0.759 cDC L2
ENSG00000112406 HECA 344089 sc-eQTL 9.57e-02 -0.153 0.0916 0.759 cDC L2
ENSG00000135540 NHSL1 786598 sc-eQTL 8.98e-02 -0.153 0.0896 0.759 cDC L2
ENSG00000135597 REPS1 490908 sc-eQTL 3.99e-01 -0.0878 0.104 0.759 cDC L2
ENSG00000146386 ABRACL 450424 sc-eQTL 4.95e-01 0.0581 0.085 0.759 cDC L2
ENSG00000164442 CITED2 104521 sc-eQTL 1.14e-01 -0.143 0.0897 0.759 cDC L2
ENSG00000225177 AL590617.2 786621 sc-eQTL 4.71e-01 0.0719 0.0995 0.759 cDC L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 3.80e-01 0.0656 0.0746 0.748 cMono_IL1B L2
ENSG00000112406 HECA 344089 sc-eQTL 8.54e-01 0.0114 0.0617 0.748 cMono_IL1B L2
ENSG00000135540 NHSL1 786598 sc-eQTL 8.83e-01 0.0133 0.0899 0.748 cMono_IL1B L2
ENSG00000135597 REPS1 490908 sc-eQTL 2.95e-02 -0.174 0.0793 0.748 cMono_IL1B L2
ENSG00000146386 ABRACL 450424 sc-eQTL 8.01e-01 -0.017 0.0675 0.748 cMono_IL1B L2
ENSG00000164442 CITED2 104521 sc-eQTL 8.63e-01 -0.0122 0.0706 0.748 cMono_IL1B L2
ENSG00000225177 AL590617.2 786621 sc-eQTL 5.41e-01 0.0576 0.094 0.748 cMono_IL1B L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 8.98e-01 0.011 0.0853 0.748 cMono_S100A L2
ENSG00000112406 HECA 344089 sc-eQTL 6.23e-02 0.134 0.0715 0.748 cMono_S100A L2
ENSG00000135540 NHSL1 786598 sc-eQTL 8.27e-01 0.0199 0.0914 0.748 cMono_S100A L2
ENSG00000135597 REPS1 490908 sc-eQTL 5.98e-01 0.0457 0.0864 0.748 cMono_S100A L2
ENSG00000146386 ABRACL 450424 sc-eQTL 3.03e-01 0.0774 0.075 0.748 cMono_S100A L2
ENSG00000164442 CITED2 104521 sc-eQTL 8.59e-01 -0.0133 0.0744 0.748 cMono_S100A L2
ENSG00000225177 AL590617.2 786621 sc-eQTL 4.89e-02 0.197 0.0992 0.748 cMono_S100A L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 2.85e-02 0.249 0.113 0.739 gdT L2
ENSG00000112406 HECA 344089 sc-eQTL 8.71e-01 0.0177 0.109 0.739 gdT L2
ENSG00000135597 REPS1 490908 sc-eQTL 6.40e-01 0.0528 0.113 0.739 gdT L2
ENSG00000146386 ABRACL 450424 sc-eQTL 8.41e-02 0.146 0.0839 0.739 gdT L2
ENSG00000164442 CITED2 104521 sc-eQTL 2.02e-01 -0.125 0.0972 0.739 gdT L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 8.78e-01 0.0156 0.101 0.756 intMono L2
ENSG00000112406 HECA 344089 sc-eQTL 4.83e-01 0.0584 0.0831 0.756 intMono L2
ENSG00000135540 NHSL1 786598 sc-eQTL 8.15e-01 -0.0215 0.0917 0.756 intMono L2
ENSG00000135597 REPS1 490908 sc-eQTL 5.46e-01 0.0573 0.0947 0.756 intMono L2
ENSG00000146386 ABRACL 450424 sc-eQTL 9.88e-01 0.00134 0.0865 0.756 intMono L2
ENSG00000164442 CITED2 104521 sc-eQTL 9.29e-01 0.00745 0.084 0.756 intMono L2
ENSG00000225177 AL590617.2 786621 sc-eQTL 8.23e-01 0.023 0.103 0.756 intMono L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 1.18e-01 -0.146 0.0933 0.744 ncMono L2
ENSG00000112406 HECA 344089 sc-eQTL 3.52e-02 0.18 0.0849 0.744 ncMono L2
ENSG00000135540 NHSL1 786598 sc-eQTL 7.11e-01 -0.0334 0.0902 0.744 ncMono L2
ENSG00000135597 REPS1 490908 sc-eQTL 4.02e-01 -0.057 0.0679 0.744 ncMono L2
ENSG00000146386 ABRACL 450424 sc-eQTL 6.75e-01 0.0344 0.0819 0.744 ncMono L2
ENSG00000164442 CITED2 104521 sc-eQTL 2.84e-01 -0.0744 0.0693 0.744 ncMono L2
ENSG00000225177 AL590617.2 786621 sc-eQTL 7.38e-01 -0.0336 0.1 0.744 ncMono L2
ENSG00000024862 CCDC28A 705660 sc-eQTL 9.63e-01 0.00508 0.108 0.754 pDC L2
ENSG00000112406 HECA 344089 sc-eQTL 8.64e-01 0.0158 0.0918 0.754 pDC L2
ENSG00000135540 NHSL1 786598 sc-eQTL 5.14e-01 0.0549 0.0838 0.754 pDC L2
ENSG00000135597 REPS1 490908 sc-eQTL 3.48e-01 0.0798 0.0848 0.754 pDC L2
ENSG00000146386 ABRACL 450424 sc-eQTL 1.87e-01 -0.123 0.0924 0.754 pDC L2
ENSG00000164442 CITED2 104521 sc-eQTL 3.46e-01 0.103 0.109 0.754 pDC L2
ENSG00000225177 AL590617.2 786621 sc-eQTL 4.65e-01 0.0617 0.0842 0.754 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 705660 sc-eQTL 3.99e-01 0.0781 0.0924 0.748 B_Memory LOneK1K
ENSG00000112406 HECA 344089 sc-eQTL 4.88e-01 0.0571 0.0823 0.748 B_Memory LOneK1K
ENSG00000135597 REPS1 490908 sc-eQTL 1.66e-01 0.118 0.085 0.748 B_Memory LOneK1K
ENSG00000146386 ABRACL 450424 sc-eQTL 8.96e-01 -0.00772 0.0592 0.748 B_Memory LOneK1K
ENSG00000164440 TXLNB 187171 sc-eQTL 8.71e-01 0.016 0.098 0.748 B_Memory LOneK1K
ENSG00000164442 CITED2 104521 sc-eQTL 9.36e-02 0.139 0.0826 0.748 B_Memory LOneK1K
ENSG00000226571 AL592429.2 207807 sc-eQTL 4.75e-01 0.0691 0.0965 0.748 B_Memory LOneK1K
ENSG00000024862 CCDC28A 705660 sc-eQTL 5.35e-01 0.0537 0.0865 0.748 B_Naive LOneK1K
ENSG00000112406 HECA 344089 sc-eQTL 3.23e-01 -0.08 0.0807 0.748 B_Naive LOneK1K
ENSG00000135597 REPS1 490908 sc-eQTL 3.26e-01 0.0678 0.0689 0.748 B_Naive LOneK1K
ENSG00000146386 ABRACL 450424 sc-eQTL 8.21e-01 0.011 0.0484 0.748 B_Naive LOneK1K
ENSG00000164440 TXLNB 187171 sc-eQTL 9.26e-01 -0.00941 0.101 0.748 B_Naive LOneK1K
ENSG00000164442 CITED2 104521 sc-eQTL 1.69e-01 0.101 0.0733 0.748 B_Naive LOneK1K
ENSG00000226571 AL592429.2 207807 sc-eQTL 5.92e-01 0.0464 0.0864 0.748 B_Naive LOneK1K
ENSG00000024862 CCDC28A 705660 sc-eQTL 3.65e-01 0.0622 0.0685 0.748 CD14_Mono LOneK1K
ENSG00000112406 HECA 344089 sc-eQTL 3.90e-01 0.0529 0.0614 0.748 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 786598 sc-eQTL 7.38e-01 0.0301 0.09 0.748 CD14_Mono LOneK1K
ENSG00000135597 REPS1 490908 sc-eQTL 1.16e-01 -0.116 0.0736 0.748 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 450424 sc-eQTL 7.75e-01 0.0188 0.0658 0.748 CD14_Mono LOneK1K
ENSG00000164442 CITED2 104521 sc-eQTL 8.09e-01 -0.0174 0.0721 0.748 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 786621 sc-eQTL 1.03e-01 0.157 0.096 0.748 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 705660 sc-eQTL 3.04e-01 -0.0961 0.0932 0.752 CD16_Mono LOneK1K
ENSG00000112406 HECA 344089 sc-eQTL 1.63e-01 0.111 0.0794 0.752 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 786598 sc-eQTL 8.19e-01 -0.0203 0.0887 0.752 CD16_Mono LOneK1K
ENSG00000135597 REPS1 490908 sc-eQTL 4.08e-01 -0.0457 0.0551 0.752 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 450424 sc-eQTL 9.83e-01 0.0017 0.0809 0.752 CD16_Mono LOneK1K
ENSG00000164442 CITED2 104521 sc-eQTL 7.96e-01 -0.018 0.0696 0.752 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 786621 sc-eQTL 7.70e-01 0.0287 0.0981 0.752 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 705660 sc-eQTL 2.74e-01 0.0956 0.0873 0.75 NK_CD56dim LOneK1K
ENSG00000112406 HECA 344089 sc-eQTL 4.92e-01 -0.0513 0.0746 0.75 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 490908 sc-eQTL 4.35e-01 -0.057 0.0728 0.75 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 450424 sc-eQTL 3.62e-01 0.0429 0.047 0.75 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 104521 sc-eQTL 6.67e-01 -0.0293 0.068 0.75 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000226571 AL592429.2 207807 eQTL 2.35e-02 0.0827 0.0364 0.0 0.0 0.259

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina