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Genes within 1Mb (chr6:139478399:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 704890 sc-eQTL 1.50e-01 0.111 0.0767 0.748 B L1
ENSG00000112406 HECA 343319 sc-eQTL 9.54e-01 0.00436 0.075 0.748 B L1
ENSG00000135597 REPS1 490138 sc-eQTL 2.12e-01 0.0827 0.066 0.748 B L1
ENSG00000146386 ABRACL 449654 sc-eQTL 4.99e-01 0.0263 0.0389 0.748 B L1
ENSG00000164440 TXLNB 186401 sc-eQTL 7.04e-01 0.0363 0.0954 0.748 B L1
ENSG00000164442 CITED2 103751 sc-eQTL 2.18e-01 0.074 0.0599 0.748 B L1
ENSG00000226571 AL592429.2 207037 sc-eQTL 6.90e-01 0.0267 0.0668 0.748 B L1
ENSG00000024862 CCDC28A 704890 sc-eQTL 3.14e-01 0.0858 0.085 0.748 CD4T L1
ENSG00000112406 HECA 343319 sc-eQTL 3.43e-01 0.0673 0.0709 0.748 CD4T L1
ENSG00000135597 REPS1 490138 sc-eQTL 5.24e-01 0.0356 0.0558 0.748 CD4T L1
ENSG00000146386 ABRACL 449654 sc-eQTL 5.99e-01 -0.0215 0.0409 0.748 CD4T L1
ENSG00000164442 CITED2 103751 sc-eQTL 8.91e-01 -0.00956 0.0699 0.748 CD4T L1
ENSG00000231329 AL031772.1 238746 sc-eQTL 7.95e-01 0.0179 0.0689 0.748 CD4T L1
ENSG00000024862 CCDC28A 704890 sc-eQTL 1.69e-01 0.13 0.0941 0.748 CD8T L1
ENSG00000112406 HECA 343319 sc-eQTL 5.89e-01 -0.0366 0.0676 0.748 CD8T L1
ENSG00000135597 REPS1 490138 sc-eQTL 5.58e-01 0.0374 0.0636 0.748 CD8T L1
ENSG00000146386 ABRACL 449654 sc-eQTL 8.87e-01 -0.00516 0.0362 0.748 CD8T L1
ENSG00000164442 CITED2 103751 sc-eQTL 1.94e-01 -0.0893 0.0685 0.748 CD8T L1
ENSG00000231329 AL031772.1 238746 sc-eQTL 8.44e-01 0.0165 0.0836 0.748 CD8T L1
ENSG00000024862 CCDC28A 704890 sc-eQTL 7.31e-01 0.0326 0.0945 0.755 DC L1
ENSG00000112406 HECA 343319 sc-eQTL 3.13e-01 -0.0786 0.0777 0.755 DC L1
ENSG00000135540 NHSL1 785828 sc-eQTL 5.50e-01 -0.0518 0.0866 0.755 DC L1
ENSG00000135597 REPS1 490138 sc-eQTL 9.53e-01 0.00449 0.0767 0.755 DC L1
ENSG00000146386 ABRACL 449654 sc-eQTL 4.85e-01 -0.0525 0.075 0.755 DC L1
ENSG00000164442 CITED2 103751 sc-eQTL 4.31e-01 -0.0701 0.0889 0.755 DC L1
ENSG00000225177 AL590617.2 785851 sc-eQTL 3.67e-01 0.0818 0.0904 0.755 DC L1
ENSG00000024862 CCDC28A 704890 sc-eQTL 7.16e-01 0.0246 0.0675 0.748 Mono L1
ENSG00000112406 HECA 343319 sc-eQTL 2.05e-01 0.0781 0.0614 0.748 Mono L1
ENSG00000135540 NHSL1 785828 sc-eQTL 8.98e-01 0.0113 0.0882 0.748 Mono L1
ENSG00000135597 REPS1 490138 sc-eQTL 5.19e-02 -0.1 0.0512 0.748 Mono L1
ENSG00000146386 ABRACL 449654 sc-eQTL 6.68e-01 0.0289 0.0672 0.748 Mono L1
ENSG00000164442 CITED2 103751 sc-eQTL 6.71e-01 -0.0302 0.0711 0.748 Mono L1
ENSG00000225177 AL590617.2 785851 sc-eQTL 1.16e-01 0.144 0.0912 0.748 Mono L1
ENSG00000024862 CCDC28A 704890 sc-eQTL 4.01e-01 0.0707 0.084 0.751 NK L1
ENSG00000112406 HECA 343319 sc-eQTL 3.15e-01 -0.0731 0.0726 0.751 NK L1
ENSG00000135597 REPS1 490138 sc-eQTL 8.39e-01 -0.0141 0.0693 0.751 NK L1
ENSG00000146386 ABRACL 449654 sc-eQTL 5.73e-01 0.0285 0.0505 0.751 NK L1
ENSG00000164442 CITED2 103751 sc-eQTL 5.78e-01 -0.0375 0.0672 0.751 NK L1
ENSG00000024862 CCDC28A 704890 sc-eQTL 1.09e-01 0.161 0.0999 0.748 Other_T L1
ENSG00000112406 HECA 343319 sc-eQTL 3.18e-01 0.0727 0.0726 0.748 Other_T L1
ENSG00000135597 REPS1 490138 sc-eQTL 5.78e-01 -0.0436 0.0782 0.748 Other_T L1
ENSG00000146386 ABRACL 449654 sc-eQTL 1.82e-01 0.0683 0.051 0.748 Other_T L1
ENSG00000164442 CITED2 103751 sc-eQTL 1.22e-02 -0.149 0.0591 0.748 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 704890 sc-eQTL 9.20e-02 -0.178 0.105 0.732 B_Activated L2
ENSG00000112406 HECA 343319 sc-eQTL 9.74e-01 0.00333 0.101 0.732 B_Activated L2
ENSG00000135597 REPS1 490138 sc-eQTL 5.08e-01 0.0701 0.106 0.732 B_Activated L2
ENSG00000146386 ABRACL 449654 sc-eQTL 8.19e-01 -0.0219 0.0958 0.732 B_Activated L2
ENSG00000164440 TXLNB 186401 sc-eQTL 5.92e-01 0.044 0.082 0.732 B_Activated L2
ENSG00000164442 CITED2 103751 sc-eQTL 1.89e-01 0.135 0.103 0.732 B_Activated L2
ENSG00000226571 AL592429.2 207037 sc-eQTL 8.95e-01 0.0136 0.103 0.732 B_Activated L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 3.27e-01 0.094 0.0956 0.747 B_Intermediate L2
ENSG00000112406 HECA 343319 sc-eQTL 2.35e-01 0.0985 0.0828 0.747 B_Intermediate L2
ENSG00000135597 REPS1 490138 sc-eQTL 3.90e-01 0.077 0.0894 0.747 B_Intermediate L2
ENSG00000146386 ABRACL 449654 sc-eQTL 4.83e-01 0.0535 0.0762 0.747 B_Intermediate L2
ENSG00000164440 TXLNB 186401 sc-eQTL 2.42e-01 0.109 0.0931 0.747 B_Intermediate L2
ENSG00000164442 CITED2 103751 sc-eQTL 6.11e-02 0.16 0.0852 0.747 B_Intermediate L2
ENSG00000226571 AL592429.2 207037 sc-eQTL 2.45e-01 0.108 0.0928 0.747 B_Intermediate L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 3.12e-01 0.0987 0.0975 0.746 B_Memory L2
ENSG00000112406 HECA 343319 sc-eQTL 9.67e-01 0.00354 0.0845 0.746 B_Memory L2
ENSG00000135597 REPS1 490138 sc-eQTL 3.15e-01 0.0921 0.0914 0.746 B_Memory L2
ENSG00000146386 ABRACL 449654 sc-eQTL 3.80e-01 -0.0636 0.0723 0.746 B_Memory L2
ENSG00000164440 TXLNB 186401 sc-eQTL 4.99e-01 -0.0626 0.0923 0.746 B_Memory L2
ENSG00000164442 CITED2 103751 sc-eQTL 5.02e-01 0.0571 0.0848 0.746 B_Memory L2
ENSG00000226571 AL592429.2 207037 sc-eQTL 8.43e-01 -0.0207 0.104 0.746 B_Memory L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 3.19e-01 0.0933 0.0933 0.748 B_Naive1 L2
ENSG00000112406 HECA 343319 sc-eQTL 5.18e-01 -0.0528 0.0815 0.748 B_Naive1 L2
ENSG00000135597 REPS1 490138 sc-eQTL 6.71e-01 0.0321 0.0754 0.748 B_Naive1 L2
ENSG00000146386 ABRACL 449654 sc-eQTL 7.02e-01 -0.0202 0.0528 0.748 B_Naive1 L2
ENSG00000164440 TXLNB 186401 sc-eQTL 9.96e-01 -0.000525 0.0988 0.748 B_Naive1 L2
ENSG00000164442 CITED2 103751 sc-eQTL 3.98e-01 0.0609 0.0718 0.748 B_Naive1 L2
ENSG00000226571 AL592429.2 207037 sc-eQTL 8.77e-01 -0.0146 0.0944 0.748 B_Naive1 L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 9.26e-01 0.00837 0.0902 0.747 B_Naive2 L2
ENSG00000112406 HECA 343319 sc-eQTL 2.53e-01 -0.097 0.0846 0.747 B_Naive2 L2
ENSG00000135597 REPS1 490138 sc-eQTL 2.41e-01 0.095 0.0807 0.747 B_Naive2 L2
ENSG00000146386 ABRACL 449654 sc-eQTL 3.65e-01 0.0541 0.0595 0.747 B_Naive2 L2
ENSG00000164440 TXLNB 186401 sc-eQTL 5.02e-01 -0.0635 0.0943 0.747 B_Naive2 L2
ENSG00000164442 CITED2 103751 sc-eQTL 4.34e-01 0.0754 0.0962 0.747 B_Naive2 L2
ENSG00000226571 AL592429.2 207037 sc-eQTL 7.60e-01 0.0271 0.0884 0.747 B_Naive2 L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 3.55e-01 -0.0854 0.0921 0.752 CD4_CTL L2
ENSG00000112406 HECA 343319 sc-eQTL 9.74e-02 0.154 0.0925 0.752 CD4_CTL L2
ENSG00000135597 REPS1 490138 sc-eQTL 4.75e-01 0.0647 0.0903 0.752 CD4_CTL L2
ENSG00000146386 ABRACL 449654 sc-eQTL 6.92e-01 -0.0327 0.0824 0.752 CD4_CTL L2
ENSG00000164442 CITED2 103751 sc-eQTL 3.96e-01 0.0704 0.0827 0.752 CD4_CTL L2
ENSG00000231329 AL031772.1 238746 sc-eQTL 7.97e-01 -0.022 0.0854 0.752 CD4_CTL L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 6.35e-01 0.0425 0.0894 0.748 CD4_Naive L2
ENSG00000112406 HECA 343319 sc-eQTL 7.11e-01 0.0258 0.0695 0.748 CD4_Naive L2
ENSG00000135597 REPS1 490138 sc-eQTL 7.61e-01 0.0188 0.0617 0.748 CD4_Naive L2
ENSG00000146386 ABRACL 449654 sc-eQTL 2.02e-01 -0.0529 0.0414 0.748 CD4_Naive L2
ENSG00000164442 CITED2 103751 sc-eQTL 7.82e-01 0.0195 0.0705 0.748 CD4_Naive L2
ENSG00000231329 AL031772.1 238746 sc-eQTL 2.44e-01 -0.083 0.0711 0.748 CD4_Naive L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 8.11e-02 0.153 0.0876 0.748 CD4_TCM L2
ENSG00000112406 HECA 343319 sc-eQTL 7.17e-01 0.0256 0.0705 0.748 CD4_TCM L2
ENSG00000135597 REPS1 490138 sc-eQTL 3.11e-01 0.0678 0.0667 0.748 CD4_TCM L2
ENSG00000146386 ABRACL 449654 sc-eQTL 7.52e-01 0.0163 0.0514 0.748 CD4_TCM L2
ENSG00000164442 CITED2 103751 sc-eQTL 4.22e-01 -0.0615 0.0764 0.748 CD4_TCM L2
ENSG00000231329 AL031772.1 238746 sc-eQTL 2.42e-01 0.0967 0.0824 0.748 CD4_TCM L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 2.11e-01 0.124 0.0987 0.748 CD4_TEM L2
ENSG00000112406 HECA 343319 sc-eQTL 2.25e-01 0.0934 0.0768 0.748 CD4_TEM L2
ENSG00000135597 REPS1 490138 sc-eQTL 8.16e-01 0.0195 0.084 0.748 CD4_TEM L2
ENSG00000146386 ABRACL 449654 sc-eQTL 7.28e-02 0.107 0.0594 0.748 CD4_TEM L2
ENSG00000164442 CITED2 103751 sc-eQTL 8.72e-01 0.0127 0.0786 0.748 CD4_TEM L2
ENSG00000231329 AL031772.1 238746 sc-eQTL 3.44e-01 0.0779 0.0821 0.748 CD4_TEM L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 5.69e-02 0.194 0.101 0.748 CD8_CTL L2
ENSG00000112406 HECA 343319 sc-eQTL 9.71e-01 0.00267 0.0744 0.748 CD8_CTL L2
ENSG00000135597 REPS1 490138 sc-eQTL 6.06e-01 0.0412 0.0796 0.748 CD8_CTL L2
ENSG00000146386 ABRACL 449654 sc-eQTL 8.29e-01 -0.0139 0.0644 0.748 CD8_CTL L2
ENSG00000164442 CITED2 103751 sc-eQTL 7.14e-01 -0.0276 0.075 0.748 CD8_CTL L2
ENSG00000231329 AL031772.1 238746 sc-eQTL 1.65e-01 0.125 0.0896 0.748 CD8_CTL L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 5.94e-01 0.0524 0.0983 0.748 CD8_Naive L2
ENSG00000112406 HECA 343319 sc-eQTL 5.37e-01 0.0469 0.0758 0.748 CD8_Naive L2
ENSG00000135597 REPS1 490138 sc-eQTL 7.74e-01 0.0219 0.0761 0.748 CD8_Naive L2
ENSG00000146386 ABRACL 449654 sc-eQTL 6.30e-01 -0.0193 0.0399 0.748 CD8_Naive L2
ENSG00000164442 CITED2 103751 sc-eQTL 7.76e-01 -0.023 0.0807 0.748 CD8_Naive L2
ENSG00000231329 AL031772.1 238746 sc-eQTL 3.44e-01 0.0874 0.0922 0.748 CD8_Naive L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 7.97e-01 -0.0278 0.108 0.75 CD8_TCM L2
ENSG00000112406 HECA 343319 sc-eQTL 6.92e-01 0.0312 0.0787 0.75 CD8_TCM L2
ENSG00000135597 REPS1 490138 sc-eQTL 8.11e-01 0.0196 0.0818 0.75 CD8_TCM L2
ENSG00000146386 ABRACL 449654 sc-eQTL 5.20e-01 -0.0525 0.0815 0.75 CD8_TCM L2
ENSG00000164442 CITED2 103751 sc-eQTL 7.75e-02 -0.147 0.0831 0.75 CD8_TCM L2
ENSG00000231329 AL031772.1 238746 sc-eQTL 1.77e-01 0.119 0.088 0.75 CD8_TCM L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 6.09e-02 -0.184 0.0975 0.737 CD8_TEM L2
ENSG00000112406 HECA 343319 sc-eQTL 2.06e-01 -0.116 0.0917 0.737 CD8_TEM L2
ENSG00000135597 REPS1 490138 sc-eQTL 3.40e-01 -0.0916 0.0957 0.737 CD8_TEM L2
ENSG00000146386 ABRACL 449654 sc-eQTL 1.29e-01 0.112 0.0735 0.737 CD8_TEM L2
ENSG00000164442 CITED2 103751 sc-eQTL 9.35e-01 -0.00655 0.0803 0.737 CD8_TEM L2
ENSG00000231329 AL031772.1 238746 sc-eQTL 9.38e-01 0.00707 0.0913 0.737 CD8_TEM L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 8.56e-01 0.0197 0.108 0.747 MAIT L2
ENSG00000112406 HECA 343319 sc-eQTL 1.99e-01 0.106 0.082 0.747 MAIT L2
ENSG00000135597 REPS1 490138 sc-eQTL 1.58e-01 -0.125 0.0883 0.747 MAIT L2
ENSG00000146386 ABRACL 449654 sc-eQTL 8.71e-01 0.0106 0.0652 0.747 MAIT L2
ENSG00000164442 CITED2 103751 sc-eQTL 4.71e-01 -0.0554 0.0767 0.747 MAIT L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 4.69e-01 -0.0733 0.101 0.749 NK_CD56bright L2
ENSG00000112406 HECA 343319 sc-eQTL 7.25e-01 0.0323 0.0916 0.749 NK_CD56bright L2
ENSG00000135597 REPS1 490138 sc-eQTL 6.84e-01 0.0348 0.0855 0.749 NK_CD56bright L2
ENSG00000146386 ABRACL 449654 sc-eQTL 6.87e-01 -0.0318 0.0787 0.749 NK_CD56bright L2
ENSG00000164442 CITED2 103751 sc-eQTL 4.34e-01 -0.0661 0.0844 0.749 NK_CD56bright L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 5.10e-02 0.177 0.0901 0.75 NK_CD56dim L2
ENSG00000112406 HECA 343319 sc-eQTL 8.95e-01 -0.0103 0.0782 0.75 NK_CD56dim L2
ENSG00000135597 REPS1 490138 sc-eQTL 1.43e-01 -0.108 0.0738 0.75 NK_CD56dim L2
ENSG00000146386 ABRACL 449654 sc-eQTL 1.87e-01 0.0662 0.05 0.75 NK_CD56dim L2
ENSG00000164442 CITED2 103751 sc-eQTL 9.49e-01 0.00426 0.0669 0.75 NK_CD56dim L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 2.91e-01 -0.112 0.105 0.749 NK_HLA L2
ENSG00000112406 HECA 343319 sc-eQTL 7.07e-01 -0.0372 0.0987 0.749 NK_HLA L2
ENSG00000135597 REPS1 490138 sc-eQTL 6.51e-01 0.0442 0.0974 0.749 NK_HLA L2
ENSG00000146386 ABRACL 449654 sc-eQTL 5.62e-01 -0.0466 0.0801 0.749 NK_HLA L2
ENSG00000164442 CITED2 103751 sc-eQTL 7.38e-01 -0.0286 0.0856 0.749 NK_HLA L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 6.30e-01 0.0454 0.0943 0.75 NK_cytokine L2
ENSG00000112406 HECA 343319 sc-eQTL 7.17e-02 -0.146 0.0806 0.75 NK_cytokine L2
ENSG00000135597 REPS1 490138 sc-eQTL 8.69e-01 -0.0138 0.0839 0.75 NK_cytokine L2
ENSG00000146386 ABRACL 449654 sc-eQTL 3.23e-01 0.0534 0.0539 0.75 NK_cytokine L2
ENSG00000164442 CITED2 103751 sc-eQTL 2.53e-01 -0.0806 0.0703 0.75 NK_cytokine L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 4.24e-01 0.0898 0.112 0.763 PB L2
ENSG00000112406 HECA 343319 sc-eQTL 6.15e-03 0.33 0.118 0.763 PB L2
ENSG00000135597 REPS1 490138 sc-eQTL 4.80e-01 -0.0767 0.108 0.763 PB L2
ENSG00000146386 ABRACL 449654 sc-eQTL 3.61e-01 0.0695 0.0757 0.763 PB L2
ENSG00000164440 TXLNB 186401 sc-eQTL 7.09e-01 -0.0415 0.111 0.763 PB L2
ENSG00000164442 CITED2 103751 sc-eQTL 5.68e-01 -0.0478 0.0834 0.763 PB L2
ENSG00000226571 AL592429.2 207037 sc-eQTL 9.75e-01 0.00353 0.112 0.763 PB L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 9.42e-01 0.00744 0.102 0.75 Pro_T L2
ENSG00000112406 HECA 343319 sc-eQTL 8.69e-01 0.0133 0.0807 0.75 Pro_T L2
ENSG00000135597 REPS1 490138 sc-eQTL 6.89e-01 -0.038 0.095 0.75 Pro_T L2
ENSG00000146386 ABRACL 449654 sc-eQTL 7.44e-01 0.02 0.0613 0.75 Pro_T L2
ENSG00000164442 CITED2 103751 sc-eQTL 5.89e-01 -0.0394 0.0729 0.75 Pro_T L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 6.80e-01 -0.0395 0.0956 0.748 Treg L2
ENSG00000112406 HECA 343319 sc-eQTL 1.37e-01 0.118 0.079 0.748 Treg L2
ENSG00000135597 REPS1 490138 sc-eQTL 6.93e-01 0.0325 0.0822 0.748 Treg L2
ENSG00000146386 ABRACL 449654 sc-eQTL 4.01e-01 0.0588 0.0699 0.748 Treg L2
ENSG00000164442 CITED2 103751 sc-eQTL 7.39e-01 0.0261 0.0782 0.748 Treg L2
ENSG00000231329 AL031772.1 238746 sc-eQTL 9.65e-01 0.00392 0.0894 0.748 Treg L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 2.61e-01 0.109 0.0967 0.759 cDC L2
ENSG00000112406 HECA 343319 sc-eQTL 9.57e-02 -0.153 0.0916 0.759 cDC L2
ENSG00000135540 NHSL1 785828 sc-eQTL 8.98e-02 -0.153 0.0896 0.759 cDC L2
ENSG00000135597 REPS1 490138 sc-eQTL 3.99e-01 -0.0878 0.104 0.759 cDC L2
ENSG00000146386 ABRACL 449654 sc-eQTL 4.95e-01 0.0581 0.085 0.759 cDC L2
ENSG00000164442 CITED2 103751 sc-eQTL 1.14e-01 -0.143 0.0897 0.759 cDC L2
ENSG00000225177 AL590617.2 785851 sc-eQTL 4.71e-01 0.0719 0.0995 0.759 cDC L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 3.80e-01 0.0656 0.0746 0.748 cMono_IL1B L2
ENSG00000112406 HECA 343319 sc-eQTL 8.54e-01 0.0114 0.0617 0.748 cMono_IL1B L2
ENSG00000135540 NHSL1 785828 sc-eQTL 8.83e-01 0.0133 0.0899 0.748 cMono_IL1B L2
ENSG00000135597 REPS1 490138 sc-eQTL 2.95e-02 -0.174 0.0793 0.748 cMono_IL1B L2
ENSG00000146386 ABRACL 449654 sc-eQTL 8.01e-01 -0.017 0.0675 0.748 cMono_IL1B L2
ENSG00000164442 CITED2 103751 sc-eQTL 8.63e-01 -0.0122 0.0706 0.748 cMono_IL1B L2
ENSG00000225177 AL590617.2 785851 sc-eQTL 5.41e-01 0.0576 0.094 0.748 cMono_IL1B L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 8.98e-01 0.011 0.0853 0.748 cMono_S100A L2
ENSG00000112406 HECA 343319 sc-eQTL 6.23e-02 0.134 0.0715 0.748 cMono_S100A L2
ENSG00000135540 NHSL1 785828 sc-eQTL 8.27e-01 0.0199 0.0914 0.748 cMono_S100A L2
ENSG00000135597 REPS1 490138 sc-eQTL 5.98e-01 0.0457 0.0864 0.748 cMono_S100A L2
ENSG00000146386 ABRACL 449654 sc-eQTL 3.03e-01 0.0774 0.075 0.748 cMono_S100A L2
ENSG00000164442 CITED2 103751 sc-eQTL 8.59e-01 -0.0133 0.0744 0.748 cMono_S100A L2
ENSG00000225177 AL590617.2 785851 sc-eQTL 4.89e-02 0.197 0.0992 0.748 cMono_S100A L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 2.85e-02 0.249 0.113 0.739 gdT L2
ENSG00000112406 HECA 343319 sc-eQTL 8.71e-01 0.0177 0.109 0.739 gdT L2
ENSG00000135597 REPS1 490138 sc-eQTL 6.40e-01 0.0528 0.113 0.739 gdT L2
ENSG00000146386 ABRACL 449654 sc-eQTL 8.41e-02 0.146 0.0839 0.739 gdT L2
ENSG00000164442 CITED2 103751 sc-eQTL 2.02e-01 -0.125 0.0972 0.739 gdT L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 8.78e-01 0.0156 0.101 0.756 intMono L2
ENSG00000112406 HECA 343319 sc-eQTL 4.83e-01 0.0584 0.0831 0.756 intMono L2
ENSG00000135540 NHSL1 785828 sc-eQTL 8.15e-01 -0.0215 0.0917 0.756 intMono L2
ENSG00000135597 REPS1 490138 sc-eQTL 5.46e-01 0.0573 0.0947 0.756 intMono L2
ENSG00000146386 ABRACL 449654 sc-eQTL 9.88e-01 0.00134 0.0865 0.756 intMono L2
ENSG00000164442 CITED2 103751 sc-eQTL 9.29e-01 0.00745 0.084 0.756 intMono L2
ENSG00000225177 AL590617.2 785851 sc-eQTL 8.23e-01 0.023 0.103 0.756 intMono L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 1.18e-01 -0.146 0.0933 0.744 ncMono L2
ENSG00000112406 HECA 343319 sc-eQTL 3.52e-02 0.18 0.0849 0.744 ncMono L2
ENSG00000135540 NHSL1 785828 sc-eQTL 7.11e-01 -0.0334 0.0902 0.744 ncMono L2
ENSG00000135597 REPS1 490138 sc-eQTL 4.02e-01 -0.057 0.0679 0.744 ncMono L2
ENSG00000146386 ABRACL 449654 sc-eQTL 6.75e-01 0.0344 0.0819 0.744 ncMono L2
ENSG00000164442 CITED2 103751 sc-eQTL 2.84e-01 -0.0744 0.0693 0.744 ncMono L2
ENSG00000225177 AL590617.2 785851 sc-eQTL 7.38e-01 -0.0336 0.1 0.744 ncMono L2
ENSG00000024862 CCDC28A 704890 sc-eQTL 9.63e-01 0.00508 0.108 0.754 pDC L2
ENSG00000112406 HECA 343319 sc-eQTL 8.64e-01 0.0158 0.0918 0.754 pDC L2
ENSG00000135540 NHSL1 785828 sc-eQTL 5.14e-01 0.0549 0.0838 0.754 pDC L2
ENSG00000135597 REPS1 490138 sc-eQTL 3.48e-01 0.0798 0.0848 0.754 pDC L2
ENSG00000146386 ABRACL 449654 sc-eQTL 1.87e-01 -0.123 0.0924 0.754 pDC L2
ENSG00000164442 CITED2 103751 sc-eQTL 3.46e-01 0.103 0.109 0.754 pDC L2
ENSG00000225177 AL590617.2 785851 sc-eQTL 4.65e-01 0.0617 0.0842 0.754 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 704890 sc-eQTL 3.99e-01 0.0781 0.0924 0.748 B_Memory LOneK1K
ENSG00000112406 HECA 343319 sc-eQTL 4.88e-01 0.0571 0.0823 0.748 B_Memory LOneK1K
ENSG00000135597 REPS1 490138 sc-eQTL 1.66e-01 0.118 0.085 0.748 B_Memory LOneK1K
ENSG00000146386 ABRACL 449654 sc-eQTL 8.96e-01 -0.00772 0.0592 0.748 B_Memory LOneK1K
ENSG00000164440 TXLNB 186401 sc-eQTL 8.71e-01 0.016 0.098 0.748 B_Memory LOneK1K
ENSG00000164442 CITED2 103751 sc-eQTL 9.36e-02 0.139 0.0826 0.748 B_Memory LOneK1K
ENSG00000226571 AL592429.2 207037 sc-eQTL 4.75e-01 0.0691 0.0965 0.748 B_Memory LOneK1K
ENSG00000024862 CCDC28A 704890 sc-eQTL 5.35e-01 0.0537 0.0865 0.748 B_Naive LOneK1K
ENSG00000112406 HECA 343319 sc-eQTL 3.23e-01 -0.08 0.0807 0.748 B_Naive LOneK1K
ENSG00000135597 REPS1 490138 sc-eQTL 3.26e-01 0.0678 0.0689 0.748 B_Naive LOneK1K
ENSG00000146386 ABRACL 449654 sc-eQTL 8.21e-01 0.011 0.0484 0.748 B_Naive LOneK1K
ENSG00000164440 TXLNB 186401 sc-eQTL 9.26e-01 -0.00941 0.101 0.748 B_Naive LOneK1K
ENSG00000164442 CITED2 103751 sc-eQTL 1.69e-01 0.101 0.0733 0.748 B_Naive LOneK1K
ENSG00000226571 AL592429.2 207037 sc-eQTL 5.92e-01 0.0464 0.0864 0.748 B_Naive LOneK1K
ENSG00000024862 CCDC28A 704890 sc-eQTL 3.65e-01 0.0622 0.0685 0.748 CD14_Mono LOneK1K
ENSG00000112406 HECA 343319 sc-eQTL 3.90e-01 0.0529 0.0614 0.748 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 785828 sc-eQTL 7.38e-01 0.0301 0.09 0.748 CD14_Mono LOneK1K
ENSG00000135597 REPS1 490138 sc-eQTL 1.16e-01 -0.116 0.0736 0.748 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 449654 sc-eQTL 7.75e-01 0.0188 0.0658 0.748 CD14_Mono LOneK1K
ENSG00000164442 CITED2 103751 sc-eQTL 8.09e-01 -0.0174 0.0721 0.748 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 785851 sc-eQTL 1.03e-01 0.157 0.096 0.748 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 704890 sc-eQTL 3.04e-01 -0.0961 0.0932 0.752 CD16_Mono LOneK1K
ENSG00000112406 HECA 343319 sc-eQTL 1.63e-01 0.111 0.0794 0.752 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 785828 sc-eQTL 8.19e-01 -0.0203 0.0887 0.752 CD16_Mono LOneK1K
ENSG00000135597 REPS1 490138 sc-eQTL 4.08e-01 -0.0457 0.0551 0.752 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 449654 sc-eQTL 9.83e-01 0.0017 0.0809 0.752 CD16_Mono LOneK1K
ENSG00000164442 CITED2 103751 sc-eQTL 7.96e-01 -0.018 0.0696 0.752 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 785851 sc-eQTL 7.70e-01 0.0287 0.0981 0.752 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 704890 sc-eQTL 2.74e-01 0.0956 0.0873 0.75 NK_CD56dim LOneK1K
ENSG00000112406 HECA 343319 sc-eQTL 4.92e-01 -0.0513 0.0746 0.75 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 490138 sc-eQTL 4.35e-01 -0.057 0.0728 0.75 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 449654 sc-eQTL 3.62e-01 0.0429 0.047 0.75 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 103751 sc-eQTL 6.67e-01 -0.0293 0.068 0.75 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000226571 AL592429.2 207037 eQTL 2.38e-02 0.0825 0.0364 0.0 0.0 0.259

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina