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Genes within 1Mb (chr6:139460482:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 686973 sc-eQTL 7.34e-01 0.0273 0.0803 0.303 B L1
ENSG00000112406 HECA 325402 sc-eQTL 6.53e-01 -0.0351 0.078 0.303 B L1
ENSG00000135597 REPS1 472221 sc-eQTL 7.87e-01 0.0187 0.069 0.303 B L1
ENSG00000146386 ABRACL 431737 sc-eQTL 1.83e-01 -0.0539 0.0404 0.303 B L1
ENSG00000164440 TXLNB 168484 sc-eQTL 6.41e-01 -0.0464 0.0993 0.303 B L1
ENSG00000164442 CITED2 85834 sc-eQTL 3.80e-01 0.0549 0.0624 0.303 B L1
ENSG00000226571 AL592429.2 189120 sc-eQTL 8.67e-01 0.0117 0.0696 0.303 B L1
ENSG00000024862 CCDC28A 686973 sc-eQTL 1.37e-01 0.129 0.0865 0.303 CD4T L1
ENSG00000112406 HECA 325402 sc-eQTL 6.86e-01 -0.0294 0.0725 0.303 CD4T L1
ENSG00000135597 REPS1 472221 sc-eQTL 3.44e-01 -0.0539 0.0569 0.303 CD4T L1
ENSG00000146386 ABRACL 431737 sc-eQTL 4.06e-01 -0.0348 0.0418 0.303 CD4T L1
ENSG00000164442 CITED2 85834 sc-eQTL 6.89e-01 -0.0286 0.0714 0.303 CD4T L1
ENSG00000231329 AL031772.1 220829 sc-eQTL 5.08e-01 0.0467 0.0703 0.303 CD4T L1
ENSG00000024862 CCDC28A 686973 sc-eQTL 3.03e-02 0.205 0.094 0.303 CD8T L1
ENSG00000112406 HECA 325402 sc-eQTL 1.15e-01 -0.107 0.0676 0.303 CD8T L1
ENSG00000135597 REPS1 472221 sc-eQTL 8.50e-01 0.0121 0.064 0.303 CD8T L1
ENSG00000146386 ABRACL 431737 sc-eQTL 8.90e-01 -0.00506 0.0364 0.303 CD8T L1
ENSG00000164442 CITED2 85834 sc-eQTL 5.32e-01 -0.0433 0.0691 0.303 CD8T L1
ENSG00000231329 AL031772.1 220829 sc-eQTL 5.54e-01 0.0497 0.084 0.303 CD8T L1
ENSG00000024862 CCDC28A 686973 sc-eQTL 3.90e-01 0.0809 0.0938 0.306 DC L1
ENSG00000112406 HECA 325402 sc-eQTL 7.80e-01 -0.0216 0.0774 0.306 DC L1
ENSG00000135540 NHSL1 767911 sc-eQTL 5.69e-01 -0.0492 0.0861 0.306 DC L1
ENSG00000135597 REPS1 472221 sc-eQTL 3.63e-01 0.0694 0.0761 0.306 DC L1
ENSG00000146386 ABRACL 431737 sc-eQTL 4.39e-01 0.0578 0.0745 0.306 DC L1
ENSG00000164442 CITED2 85834 sc-eQTL 4.18e-01 -0.0718 0.0884 0.306 DC L1
ENSG00000225177 AL590617.2 767934 sc-eQTL 2.64e-01 0.1 0.0898 0.306 DC L1
ENSG00000024862 CCDC28A 686973 sc-eQTL 3.47e-02 0.15 0.0707 0.303 Mono L1
ENSG00000112406 HECA 325402 sc-eQTL 2.89e-01 -0.0691 0.065 0.303 Mono L1
ENSG00000135540 NHSL1 767911 sc-eQTL 4.70e-01 0.0675 0.0933 0.303 Mono L1
ENSG00000135597 REPS1 472221 sc-eQTL 1.07e-02 -0.139 0.0538 0.303 Mono L1
ENSG00000146386 ABRACL 431737 sc-eQTL 1.54e-01 0.101 0.0708 0.303 Mono L1
ENSG00000164442 CITED2 85834 sc-eQTL 7.62e-01 0.0228 0.0753 0.303 Mono L1
ENSG00000225177 AL590617.2 767934 sc-eQTL 4.10e-01 0.08 0.097 0.303 Mono L1
ENSG00000024862 CCDC28A 686973 sc-eQTL 4.07e-01 0.0702 0.0845 0.305 NK L1
ENSG00000112406 HECA 325402 sc-eQTL 3.32e-01 -0.071 0.0729 0.305 NK L1
ENSG00000135597 REPS1 472221 sc-eQTL 8.91e-01 -0.00955 0.0696 0.305 NK L1
ENSG00000146386 ABRACL 431737 sc-eQTL 9.71e-01 -0.00183 0.0508 0.305 NK L1
ENSG00000164442 CITED2 85834 sc-eQTL 9.22e-01 0.0066 0.0676 0.305 NK L1
ENSG00000024862 CCDC28A 686973 sc-eQTL 4.39e-01 -0.0777 0.1 0.303 Other_T L1
ENSG00000112406 HECA 325402 sc-eQTL 9.33e-01 -0.00609 0.0726 0.303 Other_T L1
ENSG00000135597 REPS1 472221 sc-eQTL 1.85e-01 -0.103 0.0778 0.303 Other_T L1
ENSG00000146386 ABRACL 431737 sc-eQTL 1.20e-01 0.0795 0.0508 0.303 Other_T L1
ENSG00000164442 CITED2 85834 sc-eQTL 6.44e-01 -0.0277 0.0598 0.303 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 686973 sc-eQTL 3.29e-01 -0.111 0.113 0.301 B_Activated L2
ENSG00000112406 HECA 325402 sc-eQTL 3.40e-01 0.103 0.108 0.301 B_Activated L2
ENSG00000135597 REPS1 472221 sc-eQTL 2.50e-01 -0.13 0.113 0.301 B_Activated L2
ENSG00000146386 ABRACL 431737 sc-eQTL 7.54e-01 -0.0321 0.102 0.301 B_Activated L2
ENSG00000164440 TXLNB 168484 sc-eQTL 7.35e-01 0.0297 0.0876 0.301 B_Activated L2
ENSG00000164442 CITED2 85834 sc-eQTL 4.64e-01 0.0808 0.11 0.301 B_Activated L2
ENSG00000226571 AL592429.2 189120 sc-eQTL 8.77e-01 -0.0171 0.11 0.301 B_Activated L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 4.56e-01 0.073 0.0978 0.303 B_Intermediate L2
ENSG00000112406 HECA 325402 sc-eQTL 9.91e-01 0.000977 0.0848 0.303 B_Intermediate L2
ENSG00000135597 REPS1 472221 sc-eQTL 1.72e-01 -0.125 0.0911 0.303 B_Intermediate L2
ENSG00000146386 ABRACL 431737 sc-eQTL 6.67e-01 -0.0336 0.0779 0.303 B_Intermediate L2
ENSG00000164440 TXLNB 168484 sc-eQTL 9.44e-01 -0.00672 0.0954 0.303 B_Intermediate L2
ENSG00000164442 CITED2 85834 sc-eQTL 6.59e-03 0.237 0.0863 0.303 B_Intermediate L2
ENSG00000226571 AL592429.2 189120 sc-eQTL 2.75e-01 0.104 0.0948 0.303 B_Intermediate L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 3.41e-01 0.0965 0.101 0.3 B_Memory L2
ENSG00000112406 HECA 325402 sc-eQTL 7.78e-01 -0.0248 0.0876 0.3 B_Memory L2
ENSG00000135597 REPS1 472221 sc-eQTL 1.46e-01 0.138 0.0945 0.3 B_Memory L2
ENSG00000146386 ABRACL 431737 sc-eQTL 3.57e-01 -0.0692 0.075 0.3 B_Memory L2
ENSG00000164440 TXLNB 168484 sc-eQTL 7.69e-02 -0.169 0.0951 0.3 B_Memory L2
ENSG00000164442 CITED2 85834 sc-eQTL 1.67e-02 0.21 0.0869 0.3 B_Memory L2
ENSG00000226571 AL592429.2 189120 sc-eQTL 1.65e-01 -0.15 0.108 0.3 B_Memory L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 5.45e-01 -0.058 0.0957 0.303 B_Naive1 L2
ENSG00000112406 HECA 325402 sc-eQTL 4.37e-01 -0.0649 0.0834 0.303 B_Naive1 L2
ENSG00000135597 REPS1 472221 sc-eQTL 1.55e-01 0.11 0.0769 0.303 B_Naive1 L2
ENSG00000146386 ABRACL 431737 sc-eQTL 4.94e-01 -0.037 0.054 0.303 B_Naive1 L2
ENSG00000164440 TXLNB 168484 sc-eQTL 6.75e-01 0.0425 0.101 0.303 B_Naive1 L2
ENSG00000164442 CITED2 85834 sc-eQTL 4.76e-01 0.0526 0.0736 0.303 B_Naive1 L2
ENSG00000226571 AL592429.2 189120 sc-eQTL 4.98e-01 0.0655 0.0966 0.303 B_Naive1 L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 3.62e-01 -0.0848 0.0928 0.3 B_Naive2 L2
ENSG00000112406 HECA 325402 sc-eQTL 1.77e-01 -0.118 0.0871 0.3 B_Naive2 L2
ENSG00000135597 REPS1 472221 sc-eQTL 3.43e-01 0.0792 0.0833 0.3 B_Naive2 L2
ENSG00000146386 ABRACL 431737 sc-eQTL 1.93e-01 -0.08 0.0612 0.3 B_Naive2 L2
ENSG00000164440 TXLNB 168484 sc-eQTL 9.87e-01 -0.00159 0.0973 0.3 B_Naive2 L2
ENSG00000164442 CITED2 85834 sc-eQTL 8.50e-01 -0.0188 0.0993 0.3 B_Naive2 L2
ENSG00000226571 AL592429.2 189120 sc-eQTL 1.00e+00 -4.91e-05 0.0911 0.3 B_Naive2 L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 5.60e-01 -0.0549 0.0942 0.314 CD4_CTL L2
ENSG00000112406 HECA 325402 sc-eQTL 4.96e-01 -0.0648 0.095 0.314 CD4_CTL L2
ENSG00000135597 REPS1 472221 sc-eQTL 4.30e-01 -0.0729 0.0922 0.314 CD4_CTL L2
ENSG00000146386 ABRACL 431737 sc-eQTL 2.24e-01 -0.102 0.0839 0.314 CD4_CTL L2
ENSG00000164442 CITED2 85834 sc-eQTL 5.32e-01 -0.0529 0.0845 0.314 CD4_CTL L2
ENSG00000231329 AL031772.1 220829 sc-eQTL 6.40e-02 -0.161 0.0865 0.314 CD4_CTL L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 5.43e-01 0.0557 0.0914 0.303 CD4_Naive L2
ENSG00000112406 HECA 325402 sc-eQTL 4.37e-01 -0.0552 0.071 0.303 CD4_Naive L2
ENSG00000135597 REPS1 472221 sc-eQTL 4.44e-01 -0.0483 0.063 0.303 CD4_Naive L2
ENSG00000146386 ABRACL 431737 sc-eQTL 3.34e-02 -0.0899 0.042 0.303 CD4_Naive L2
ENSG00000164442 CITED2 85834 sc-eQTL 6.63e-01 -0.0314 0.0721 0.303 CD4_Naive L2
ENSG00000231329 AL031772.1 220829 sc-eQTL 1.94e-01 -0.0946 0.0726 0.303 CD4_Naive L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 7.91e-02 0.157 0.0892 0.303 CD4_TCM L2
ENSG00000112406 HECA 325402 sc-eQTL 8.58e-01 0.0129 0.0718 0.303 CD4_TCM L2
ENSG00000135597 REPS1 472221 sc-eQTL 4.35e-01 -0.0532 0.068 0.303 CD4_TCM L2
ENSG00000146386 ABRACL 431737 sc-eQTL 9.01e-01 -0.00653 0.0524 0.303 CD4_TCM L2
ENSG00000164442 CITED2 85834 sc-eQTL 8.33e-01 -0.0164 0.0779 0.303 CD4_TCM L2
ENSG00000231329 AL031772.1 220829 sc-eQTL 2.90e-02 0.183 0.0832 0.303 CD4_TCM L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 1.38e-01 0.151 0.102 0.303 CD4_TEM L2
ENSG00000112406 HECA 325402 sc-eQTL 6.63e-01 -0.0347 0.0794 0.303 CD4_TEM L2
ENSG00000135597 REPS1 472221 sc-eQTL 8.26e-01 0.019 0.0865 0.303 CD4_TEM L2
ENSG00000146386 ABRACL 431737 sc-eQTL 5.73e-01 0.0348 0.0617 0.303 CD4_TEM L2
ENSG00000164442 CITED2 85834 sc-eQTL 9.68e-01 0.0033 0.081 0.303 CD4_TEM L2
ENSG00000231329 AL031772.1 220829 sc-eQTL 3.85e-01 0.0736 0.0846 0.303 CD4_TEM L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 8.77e-01 -0.0161 0.104 0.303 CD8_CTL L2
ENSG00000112406 HECA 325402 sc-eQTL 1.11e-01 -0.12 0.0751 0.303 CD8_CTL L2
ENSG00000135597 REPS1 472221 sc-eQTL 5.78e-01 0.045 0.0808 0.303 CD8_CTL L2
ENSG00000146386 ABRACL 431737 sc-eQTL 2.42e-01 0.0764 0.0652 0.303 CD8_CTL L2
ENSG00000164442 CITED2 85834 sc-eQTL 4.72e-01 -0.0548 0.0761 0.303 CD8_CTL L2
ENSG00000231329 AL031772.1 220829 sc-eQTL 5.56e-01 -0.0539 0.0913 0.303 CD8_CTL L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 2.31e-02 0.222 0.0972 0.303 CD8_Naive L2
ENSG00000112406 HECA 325402 sc-eQTL 1.30e-01 -0.115 0.0755 0.303 CD8_Naive L2
ENSG00000135597 REPS1 472221 sc-eQTL 6.56e-01 0.034 0.0761 0.303 CD8_Naive L2
ENSG00000146386 ABRACL 431737 sc-eQTL 3.02e-02 -0.0862 0.0395 0.303 CD8_Naive L2
ENSG00000164442 CITED2 85834 sc-eQTL 9.49e-01 -0.00514 0.0807 0.303 CD8_Naive L2
ENSG00000231329 AL031772.1 220829 sc-eQTL 6.55e-01 0.0413 0.0923 0.303 CD8_Naive L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 7.77e-01 0.0315 0.111 0.296 CD8_TCM L2
ENSG00000112406 HECA 325402 sc-eQTL 2.23e-01 -0.099 0.081 0.296 CD8_TCM L2
ENSG00000135597 REPS1 472221 sc-eQTL 4.51e-01 -0.0637 0.0843 0.296 CD8_TCM L2
ENSG00000146386 ABRACL 431737 sc-eQTL 9.29e-01 -0.00753 0.0842 0.296 CD8_TCM L2
ENSG00000164442 CITED2 85834 sc-eQTL 8.44e-01 0.017 0.0865 0.296 CD8_TCM L2
ENSG00000231329 AL031772.1 220829 sc-eQTL 7.02e-02 0.165 0.0905 0.296 CD8_TCM L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 7.11e-01 -0.0384 0.104 0.295 CD8_TEM L2
ENSG00000112406 HECA 325402 sc-eQTL 6.76e-01 -0.0407 0.0971 0.295 CD8_TEM L2
ENSG00000135597 REPS1 472221 sc-eQTL 4.31e-01 0.0797 0.101 0.295 CD8_TEM L2
ENSG00000146386 ABRACL 431737 sc-eQTL 5.14e-01 0.0508 0.0778 0.295 CD8_TEM L2
ENSG00000164442 CITED2 85834 sc-eQTL 5.53e-01 -0.0502 0.0846 0.295 CD8_TEM L2
ENSG00000231329 AL031772.1 220829 sc-eQTL 3.51e-01 0.0898 0.0961 0.295 CD8_TEM L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 2.08e-01 -0.137 0.108 0.305 MAIT L2
ENSG00000112406 HECA 325402 sc-eQTL 5.95e-01 -0.0439 0.0826 0.305 MAIT L2
ENSG00000135597 REPS1 472221 sc-eQTL 1.07e-01 -0.143 0.0884 0.305 MAIT L2
ENSG00000146386 ABRACL 431737 sc-eQTL 1.87e-01 0.0862 0.0652 0.305 MAIT L2
ENSG00000164442 CITED2 85834 sc-eQTL 7.01e-01 0.0296 0.077 0.305 MAIT L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 4.48e-01 -0.0773 0.102 0.304 NK_CD56bright L2
ENSG00000112406 HECA 325402 sc-eQTL 2.04e-01 -0.117 0.092 0.304 NK_CD56bright L2
ENSG00000135597 REPS1 472221 sc-eQTL 4.52e-01 0.0649 0.086 0.304 NK_CD56bright L2
ENSG00000146386 ABRACL 431737 sc-eQTL 5.16e-01 0.0516 0.0793 0.304 NK_CD56bright L2
ENSG00000164442 CITED2 85834 sc-eQTL 5.24e-01 0.0542 0.0851 0.304 NK_CD56bright L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 2.15e-01 0.114 0.0914 0.306 NK_CD56dim L2
ENSG00000112406 HECA 325402 sc-eQTL 3.11e-01 -0.08 0.0787 0.306 NK_CD56dim L2
ENSG00000135597 REPS1 472221 sc-eQTL 2.79e-01 -0.081 0.0746 0.306 NK_CD56dim L2
ENSG00000146386 ABRACL 431737 sc-eQTL 4.96e-01 0.0345 0.0506 0.306 NK_CD56dim L2
ENSG00000164442 CITED2 85834 sc-eQTL 4.91e-01 0.0465 0.0675 0.306 NK_CD56dim L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 1.39e-01 -0.155 0.105 0.308 NK_HLA L2
ENSG00000112406 HECA 325402 sc-eQTL 5.39e-01 -0.0604 0.0982 0.308 NK_HLA L2
ENSG00000135597 REPS1 472221 sc-eQTL 2.38e-01 0.114 0.0967 0.308 NK_HLA L2
ENSG00000146386 ABRACL 431737 sc-eQTL 8.88e-01 0.0113 0.0798 0.308 NK_HLA L2
ENSG00000164442 CITED2 85834 sc-eQTL 3.36e-01 -0.0819 0.085 0.308 NK_HLA L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 2.07e-01 0.119 0.094 0.306 NK_cytokine L2
ENSG00000112406 HECA 325402 sc-eQTL 5.99e-01 -0.0427 0.0813 0.306 NK_cytokine L2
ENSG00000135597 REPS1 472221 sc-eQTL 3.20e-01 -0.0835 0.0837 0.306 NK_cytokine L2
ENSG00000146386 ABRACL 431737 sc-eQTL 9.64e-01 -0.00245 0.0541 0.306 NK_cytokine L2
ENSG00000164442 CITED2 85834 sc-eQTL 3.80e-01 -0.062 0.0705 0.306 NK_cytokine L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 5.84e-01 -0.06 0.109 0.315 PB L2
ENSG00000112406 HECA 325402 sc-eQTL 9.41e-01 -0.0089 0.119 0.315 PB L2
ENSG00000135597 REPS1 472221 sc-eQTL 1.92e-01 0.138 0.105 0.315 PB L2
ENSG00000146386 ABRACL 431737 sc-eQTL 1.81e-01 0.0989 0.0735 0.315 PB L2
ENSG00000164440 TXLNB 168484 sc-eQTL 9.95e-01 -0.000673 0.108 0.315 PB L2
ENSG00000164442 CITED2 85834 sc-eQTL 4.96e-03 -0.226 0.0787 0.315 PB L2
ENSG00000226571 AL592429.2 189120 sc-eQTL 2.59e-01 -0.123 0.109 0.315 PB L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 3.40e-01 -0.0991 0.104 0.302 Pro_T L2
ENSG00000112406 HECA 325402 sc-eQTL 5.65e-01 0.0471 0.0817 0.302 Pro_T L2
ENSG00000135597 REPS1 472221 sc-eQTL 3.19e-01 0.0961 0.0961 0.302 Pro_T L2
ENSG00000146386 ABRACL 431737 sc-eQTL 3.64e-01 -0.0564 0.062 0.302 Pro_T L2
ENSG00000164442 CITED2 85834 sc-eQTL 5.44e-01 0.045 0.0739 0.302 Pro_T L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 9.43e-01 0.00705 0.098 0.303 Treg L2
ENSG00000112406 HECA 325402 sc-eQTL 8.48e-01 -0.0156 0.0814 0.303 Treg L2
ENSG00000135597 REPS1 472221 sc-eQTL 9.01e-01 0.0104 0.0843 0.303 Treg L2
ENSG00000146386 ABRACL 431737 sc-eQTL 3.28e-01 0.0702 0.0716 0.303 Treg L2
ENSG00000164442 CITED2 85834 sc-eQTL 5.05e-01 0.0535 0.08 0.303 Treg L2
ENSG00000231329 AL031772.1 220829 sc-eQTL 4.42e-01 0.0705 0.0915 0.303 Treg L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 3.59e-01 0.0875 0.0952 0.312 cDC L2
ENSG00000112406 HECA 325402 sc-eQTL 4.21e-01 -0.0731 0.0906 0.312 cDC L2
ENSG00000135540 NHSL1 767911 sc-eQTL 1.01e-01 -0.145 0.0881 0.312 cDC L2
ENSG00000135597 REPS1 472221 sc-eQTL 6.08e-01 0.0526 0.102 0.312 cDC L2
ENSG00000146386 ABRACL 431737 sc-eQTL 3.59e-01 0.0768 0.0835 0.312 cDC L2
ENSG00000164442 CITED2 85834 sc-eQTL 7.94e-01 -0.0233 0.0887 0.312 cDC L2
ENSG00000225177 AL590617.2 767934 sc-eQTL 6.04e-01 0.0509 0.0979 0.312 cDC L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 2.22e-01 0.0933 0.0762 0.303 cMono_IL1B L2
ENSG00000112406 HECA 325402 sc-eQTL 1.52e-01 -0.0905 0.0629 0.303 cMono_IL1B L2
ENSG00000135540 NHSL1 767911 sc-eQTL 3.81e-01 0.0807 0.0918 0.303 cMono_IL1B L2
ENSG00000135597 REPS1 472221 sc-eQTL 1.25e-01 -0.126 0.0817 0.303 cMono_IL1B L2
ENSG00000146386 ABRACL 431737 sc-eQTL 1.79e-01 0.0928 0.0688 0.303 cMono_IL1B L2
ENSG00000164442 CITED2 85834 sc-eQTL 2.95e-01 -0.0756 0.072 0.303 cMono_IL1B L2
ENSG00000225177 AL590617.2 767934 sc-eQTL 3.95e-01 0.0819 0.0962 0.303 cMono_IL1B L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 9.29e-02 0.146 0.0865 0.303 cMono_S100A L2
ENSG00000112406 HECA 325402 sc-eQTL 5.95e-01 -0.0392 0.0736 0.303 cMono_S100A L2
ENSG00000135540 NHSL1 767911 sc-eQTL 6.75e-01 -0.0392 0.0933 0.303 cMono_S100A L2
ENSG00000135597 REPS1 472221 sc-eQTL 9.71e-01 -0.00321 0.0883 0.303 cMono_S100A L2
ENSG00000146386 ABRACL 431737 sc-eQTL 7.45e-01 -0.0249 0.0767 0.303 cMono_S100A L2
ENSG00000164442 CITED2 85834 sc-eQTL 9.55e-01 -0.00428 0.076 0.303 cMono_S100A L2
ENSG00000225177 AL590617.2 767934 sc-eQTL 9.51e-02 0.17 0.102 0.303 cMono_S100A L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 4.65e-01 0.0854 0.116 0.3 gdT L2
ENSG00000112406 HECA 325402 sc-eQTL 8.28e-01 0.0241 0.111 0.3 gdT L2
ENSG00000135597 REPS1 472221 sc-eQTL 8.47e-01 0.0222 0.115 0.3 gdT L2
ENSG00000146386 ABRACL 431737 sc-eQTL 3.86e-01 -0.0748 0.086 0.3 gdT L2
ENSG00000164442 CITED2 85834 sc-eQTL 7.13e-01 0.0367 0.0994 0.3 gdT L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 2.79e-01 0.111 0.102 0.304 intMono L2
ENSG00000112406 HECA 325402 sc-eQTL 8.08e-01 -0.0204 0.0839 0.304 intMono L2
ENSG00000135540 NHSL1 767911 sc-eQTL 7.92e-01 -0.0244 0.0925 0.304 intMono L2
ENSG00000135597 REPS1 472221 sc-eQTL 9.29e-01 -0.00852 0.0956 0.304 intMono L2
ENSG00000146386 ABRACL 431737 sc-eQTL 8.30e-01 0.0188 0.0872 0.304 intMono L2
ENSG00000164442 CITED2 85834 sc-eQTL 9.97e-02 -0.139 0.0841 0.304 intMono L2
ENSG00000225177 AL590617.2 767934 sc-eQTL 4.62e-01 0.0763 0.104 0.304 intMono L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 2.47e-02 0.214 0.0946 0.296 ncMono L2
ENSG00000112406 HECA 325402 sc-eQTL 6.98e-01 0.034 0.0875 0.296 ncMono L2
ENSG00000135540 NHSL1 767911 sc-eQTL 8.20e-01 -0.021 0.092 0.296 ncMono L2
ENSG00000135597 REPS1 472221 sc-eQTL 7.94e-02 -0.121 0.0688 0.296 ncMono L2
ENSG00000146386 ABRACL 431737 sc-eQTL 7.92e-01 0.022 0.0835 0.296 ncMono L2
ENSG00000164442 CITED2 85834 sc-eQTL 5.54e-01 -0.042 0.0708 0.296 ncMono L2
ENSG00000225177 AL590617.2 767934 sc-eQTL 9.54e-01 0.00593 0.102 0.296 ncMono L2
ENSG00000024862 CCDC28A 686973 sc-eQTL 5.96e-01 -0.0568 0.107 0.311 pDC L2
ENSG00000112406 HECA 325402 sc-eQTL 2.70e-01 -0.0998 0.0901 0.311 pDC L2
ENSG00000135540 NHSL1 767911 sc-eQTL 2.95e-02 0.179 0.0815 0.311 pDC L2
ENSG00000135597 REPS1 472221 sc-eQTL 3.73e-01 -0.0746 0.0836 0.311 pDC L2
ENSG00000146386 ABRACL 431737 sc-eQTL 1.97e-01 -0.118 0.0911 0.311 pDC L2
ENSG00000164442 CITED2 85834 sc-eQTL 8.79e-01 -0.0164 0.108 0.311 pDC L2
ENSG00000225177 AL590617.2 767934 sc-eQTL 2.94e-01 0.0871 0.0828 0.311 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 686973 sc-eQTL 3.11e-01 0.0964 0.0948 0.303 B_Memory LOneK1K
ENSG00000112406 HECA 325402 sc-eQTL 8.68e-01 0.014 0.0846 0.303 B_Memory LOneK1K
ENSG00000135597 REPS1 472221 sc-eQTL 8.62e-01 -0.0153 0.0877 0.303 B_Memory LOneK1K
ENSG00000146386 ABRACL 431737 sc-eQTL 3.91e-01 -0.0521 0.0607 0.303 B_Memory LOneK1K
ENSG00000164440 TXLNB 168484 sc-eQTL 7.53e-02 -0.179 0.0999 0.303 B_Memory LOneK1K
ENSG00000164442 CITED2 85834 sc-eQTL 1.14e-02 0.215 0.0841 0.303 B_Memory LOneK1K
ENSG00000226571 AL592429.2 189120 sc-eQTL 7.55e-01 0.0311 0.0993 0.303 B_Memory LOneK1K
ENSG00000024862 CCDC28A 686973 sc-eQTL 3.12e-01 -0.0907 0.0895 0.303 B_Naive LOneK1K
ENSG00000112406 HECA 325402 sc-eQTL 2.01e-01 -0.107 0.0836 0.303 B_Naive LOneK1K
ENSG00000135597 REPS1 472221 sc-eQTL 2.04e-01 0.0908 0.0713 0.303 B_Naive LOneK1K
ENSG00000146386 ABRACL 431737 sc-eQTL 3.44e-01 -0.0475 0.0501 0.303 B_Naive LOneK1K
ENSG00000164440 TXLNB 168484 sc-eQTL 9.26e-01 -0.00971 0.105 0.303 B_Naive LOneK1K
ENSG00000164442 CITED2 85834 sc-eQTL 5.32e-01 0.0477 0.0763 0.303 B_Naive LOneK1K
ENSG00000226571 AL592429.2 189120 sc-eQTL 3.76e-01 0.0794 0.0895 0.303 B_Naive LOneK1K
ENSG00000024862 CCDC28A 686973 sc-eQTL 5.22e-02 0.136 0.0697 0.303 CD14_Mono LOneK1K
ENSG00000112406 HECA 325402 sc-eQTL 2.26e-01 -0.0763 0.0628 0.303 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 767911 sc-eQTL 5.24e-01 0.0588 0.0921 0.303 CD14_Mono LOneK1K
ENSG00000135597 REPS1 472221 sc-eQTL 2.21e-01 -0.0926 0.0755 0.303 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 431737 sc-eQTL 4.17e-01 0.0547 0.0673 0.303 CD14_Mono LOneK1K
ENSG00000164442 CITED2 85834 sc-eQTL 4.91e-01 -0.0509 0.0738 0.303 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 767934 sc-eQTL 8.90e-02 0.168 0.0982 0.303 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 686973 sc-eQTL 4.68e-02 0.188 0.0942 0.304 CD16_Mono LOneK1K
ENSG00000112406 HECA 325402 sc-eQTL 6.55e-01 0.0363 0.0812 0.304 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 767911 sc-eQTL 2.05e-01 -0.114 0.09 0.304 CD16_Mono LOneK1K
ENSG00000135597 REPS1 472221 sc-eQTL 1.30e-01 -0.085 0.0559 0.304 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 431737 sc-eQTL 7.37e-01 0.0277 0.0823 0.304 CD16_Mono LOneK1K
ENSG00000164442 CITED2 85834 sc-eQTL 6.55e-01 -0.0317 0.0709 0.304 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 767934 sc-eQTL 7.74e-01 0.0287 0.0998 0.304 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 686973 sc-eQTL 1.76e-01 0.119 0.0877 0.306 NK_CD56dim LOneK1K
ENSG00000112406 HECA 325402 sc-eQTL 6.08e-01 -0.0386 0.0751 0.306 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 472221 sc-eQTL 5.12e-01 -0.0482 0.0734 0.306 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 431737 sc-eQTL 9.13e-01 0.00516 0.0474 0.306 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 85834 sc-eQTL 9.63e-01 0.00315 0.0685 0.306 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000135540 NHSL1 767911 eQTL 0.0417 0.0526 0.0258 0.0 0.0 0.286
ENSG00000146386 ABRACL 431737 eQTL 0.039 0.0504 0.0244 0.0 0.0 0.286
ENSG00000279968 GVQW2 686830 eQTL 0.00383 0.136 0.047 0.0 0.0 0.286

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000164440 \N 168484 3.24e-06 2.63e-06 3.28e-07 1.97e-06 5.79e-07 7.3e-07 2.28e-06 7.33e-07 2.08e-06 1.2e-06 2.49e-06 1.49e-06 3.69e-06 1.33e-06 9.19e-07 1.68e-06 1.27e-06 2.31e-06 1.15e-06 1.37e-06 1.28e-06 3.03e-06 2.64e-06 1.24e-06 4.02e-06 1.23e-06 1.47e-06 1.81e-06 2.66e-06 2e-06 1.84e-06 3.8e-07 5.24e-07 1.28e-06 1.45e-06 9.57e-07 7.95e-07 4.2e-07 1.17e-06 3.96e-07 2.25e-07 3.43e-06 5.58e-07 2.07e-07 2.89e-07 3.47e-07 8.61e-07 2.29e-07 1.89e-07
ENSG00000225177 \N 767934 2.77e-07 1.34e-07 5.49e-08 1.89e-07 1.01e-07 8.33e-08 1.73e-07 5.66e-08 1.47e-07 6.4e-08 1.63e-07 1.11e-07 1.69e-07 7.64e-08 5.72e-08 7.23e-08 4.24e-08 1.44e-07 6.32e-08 4.8e-08 1.26e-07 1.25e-07 1.5e-07 3.17e-08 1.65e-07 1.26e-07 1.18e-07 9.92e-08 1.22e-07 9.88e-08 1.06e-07 3.03e-08 4.02e-08 8.72e-08 3.52e-08 3.14e-08 5.3e-08 8.63e-08 6.71e-08 4.47e-08 5.54e-08 1.46e-07 5.12e-08 1.16e-08 3.4e-08 1.92e-08 1.15e-07 1.89e-09 5.01e-08