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Genes within 1Mb (chr6:139434612:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 661103 sc-eQTL 9.31e-01 -0.00705 0.0809 0.37 B L1
ENSG00000112406 HECA 299532 sc-eQTL 4.67e-01 -0.0572 0.0786 0.37 B L1
ENSG00000135597 REPS1 446351 sc-eQTL 9.69e-01 0.00271 0.0695 0.37 B L1
ENSG00000146386 ABRACL 405867 sc-eQTL 4.64e-01 -0.0299 0.0408 0.37 B L1
ENSG00000164440 TXLNB 142614 sc-eQTL 3.44e-01 -0.0947 0.0998 0.37 B L1
ENSG00000164442 CITED2 59964 sc-eQTL 2.49e-01 0.0727 0.0628 0.37 B L1
ENSG00000226571 AL592429.2 163250 sc-eQTL 7.22e-01 0.025 0.0701 0.37 B L1
ENSG00000024862 CCDC28A 661103 sc-eQTL 1.12e-01 0.139 0.0871 0.37 CD4T L1
ENSG00000112406 HECA 299532 sc-eQTL 5.49e-01 -0.0438 0.073 0.37 CD4T L1
ENSG00000135597 REPS1 446351 sc-eQTL 2.12e-01 -0.0716 0.0573 0.37 CD4T L1
ENSG00000146386 ABRACL 405867 sc-eQTL 2.29e-01 -0.0506 0.042 0.37 CD4T L1
ENSG00000164442 CITED2 59964 sc-eQTL 3.94e-01 0.0614 0.0718 0.37 CD4T L1
ENSG00000231329 AL031772.1 194959 sc-eQTL 4.50e-01 0.0536 0.0709 0.37 CD4T L1
ENSG00000024862 CCDC28A 661103 sc-eQTL 2.27e-02 0.217 0.0945 0.37 CD8T L1
ENSG00000112406 HECA 299532 sc-eQTL 1.05e-01 -0.111 0.0681 0.37 CD8T L1
ENSG00000135597 REPS1 446351 sc-eQTL 8.43e-01 0.0128 0.0644 0.37 CD8T L1
ENSG00000146386 ABRACL 405867 sc-eQTL 4.96e-01 -0.025 0.0367 0.37 CD8T L1
ENSG00000164442 CITED2 59964 sc-eQTL 4.00e-01 0.0586 0.0695 0.37 CD8T L1
ENSG00000231329 AL031772.1 194959 sc-eQTL 7.38e-01 0.0283 0.0846 0.37 CD8T L1
ENSG00000024862 CCDC28A 661103 sc-eQTL 5.38e-01 0.0567 0.092 0.378 DC L1
ENSG00000112406 HECA 299532 sc-eQTL 6.15e-01 -0.0382 0.0758 0.378 DC L1
ENSG00000135540 NHSL1 742041 sc-eQTL 9.67e-01 -0.00352 0.0845 0.378 DC L1
ENSG00000135597 REPS1 446351 sc-eQTL 2.37e-01 0.0884 0.0744 0.378 DC L1
ENSG00000146386 ABRACL 405867 sc-eQTL 4.62e-01 0.0538 0.0731 0.378 DC L1
ENSG00000164442 CITED2 59964 sc-eQTL 6.30e-01 -0.0419 0.0868 0.378 DC L1
ENSG00000225177 AL590617.2 742064 sc-eQTL 1.01e-01 0.145 0.0877 0.378 DC L1
ENSG00000024862 CCDC28A 661103 sc-eQTL 2.89e-02 0.153 0.0693 0.37 Mono L1
ENSG00000112406 HECA 299532 sc-eQTL 3.07e-01 -0.0653 0.0638 0.37 Mono L1
ENSG00000135540 NHSL1 742041 sc-eQTL 3.75e-01 0.0813 0.0915 0.37 Mono L1
ENSG00000135597 REPS1 446351 sc-eQTL 3.14e-01 -0.054 0.0535 0.37 Mono L1
ENSG00000146386 ABRACL 405867 sc-eQTL 6.04e-01 0.0363 0.0698 0.37 Mono L1
ENSG00000164442 CITED2 59964 sc-eQTL 5.04e-01 0.0494 0.0738 0.37 Mono L1
ENSG00000225177 AL590617.2 742064 sc-eQTL 3.26e-02 0.203 0.0943 0.37 Mono L1
ENSG00000024862 CCDC28A 661103 sc-eQTL 4.37e-01 0.0662 0.085 0.371 NK L1
ENSG00000112406 HECA 299532 sc-eQTL 3.25e-01 -0.0725 0.0734 0.371 NK L1
ENSG00000135597 REPS1 446351 sc-eQTL 9.72e-01 -0.00249 0.0701 0.371 NK L1
ENSG00000146386 ABRACL 405867 sc-eQTL 5.92e-01 -0.0274 0.0511 0.371 NK L1
ENSG00000164442 CITED2 59964 sc-eQTL 5.20e-01 0.0438 0.0679 0.371 NK L1
ENSG00000024862 CCDC28A 661103 sc-eQTL 1.42e-01 -0.147 0.0996 0.37 Other_T L1
ENSG00000112406 HECA 299532 sc-eQTL 9.53e-01 -0.00427 0.0725 0.37 Other_T L1
ENSG00000135597 REPS1 446351 sc-eQTL 9.20e-01 -0.00779 0.0779 0.37 Other_T L1
ENSG00000146386 ABRACL 405867 sc-eQTL 9.42e-01 -0.00374 0.051 0.37 Other_T L1
ENSG00000164442 CITED2 59964 sc-eQTL 9.40e-01 0.00452 0.0597 0.37 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 661103 sc-eQTL 9.63e-01 -0.00523 0.114 0.37 B_Activated L2
ENSG00000112406 HECA 299532 sc-eQTL 5.68e-01 -0.0621 0.109 0.37 B_Activated L2
ENSG00000135597 REPS1 446351 sc-eQTL 4.96e-01 -0.0775 0.114 0.37 B_Activated L2
ENSG00000146386 ABRACL 405867 sc-eQTL 7.09e-01 -0.0385 0.103 0.37 B_Activated L2
ENSG00000164440 TXLNB 142614 sc-eQTL 3.45e-01 0.0832 0.0879 0.37 B_Activated L2
ENSG00000164442 CITED2 59964 sc-eQTL 5.08e-01 0.0734 0.111 0.37 B_Activated L2
ENSG00000226571 AL592429.2 163250 sc-eQTL 6.07e-01 0.057 0.111 0.37 B_Activated L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 6.52e-01 0.0442 0.0978 0.369 B_Intermediate L2
ENSG00000112406 HECA 299532 sc-eQTL 5.82e-01 -0.0467 0.0847 0.369 B_Intermediate L2
ENSG00000135597 REPS1 446351 sc-eQTL 3.58e-01 -0.084 0.0913 0.369 B_Intermediate L2
ENSG00000146386 ABRACL 405867 sc-eQTL 4.88e-01 0.054 0.0778 0.369 B_Intermediate L2
ENSG00000164440 TXLNB 142614 sc-eQTL 9.64e-01 -0.00428 0.0954 0.369 B_Intermediate L2
ENSG00000164442 CITED2 59964 sc-eQTL 1.35e-02 0.216 0.0865 0.369 B_Intermediate L2
ENSG00000226571 AL592429.2 163250 sc-eQTL 3.12e-01 0.0961 0.0948 0.369 B_Intermediate L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 8.74e-01 0.0162 0.102 0.366 B_Memory L2
ENSG00000112406 HECA 299532 sc-eQTL 6.10e-01 0.0448 0.0878 0.366 B_Memory L2
ENSG00000135597 REPS1 446351 sc-eQTL 1.46e-01 0.138 0.0948 0.366 B_Memory L2
ENSG00000146386 ABRACL 405867 sc-eQTL 1.23e-01 -0.116 0.0749 0.366 B_Memory L2
ENSG00000164440 TXLNB 142614 sc-eQTL 2.01e-01 -0.123 0.0957 0.366 B_Memory L2
ENSG00000164442 CITED2 59964 sc-eQTL 1.04e-01 0.143 0.0878 0.366 B_Memory L2
ENSG00000226571 AL592429.2 163250 sc-eQTL 5.98e-01 -0.0572 0.108 0.366 B_Memory L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 9.28e-01 0.00875 0.0965 0.37 B_Naive1 L2
ENSG00000112406 HECA 299532 sc-eQTL 3.14e-01 -0.0847 0.084 0.37 B_Naive1 L2
ENSG00000135597 REPS1 446351 sc-eQTL 2.78e-01 0.0846 0.0777 0.37 B_Naive1 L2
ENSG00000146386 ABRACL 405867 sc-eQTL 9.91e-01 0.000583 0.0545 0.37 B_Naive1 L2
ENSG00000164440 TXLNB 142614 sc-eQTL 7.93e-01 0.0268 0.102 0.37 B_Naive1 L2
ENSG00000164442 CITED2 59964 sc-eQTL 1.80e-01 0.0994 0.0739 0.37 B_Naive1 L2
ENSG00000226571 AL592429.2 163250 sc-eQTL 4.51e-01 0.0735 0.0973 0.37 B_Naive1 L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 1.42e-02 -0.226 0.0914 0.367 B_Naive2 L2
ENSG00000112406 HECA 299532 sc-eQTL 2.53e-01 -0.0996 0.087 0.367 B_Naive2 L2
ENSG00000135597 REPS1 446351 sc-eQTL 7.48e-01 0.0267 0.0833 0.367 B_Naive2 L2
ENSG00000146386 ABRACL 405867 sc-eQTL 1.25e-01 -0.094 0.0609 0.367 B_Naive2 L2
ENSG00000164440 TXLNB 142614 sc-eQTL 8.70e-01 -0.016 0.0971 0.367 B_Naive2 L2
ENSG00000164442 CITED2 59964 sc-eQTL 7.15e-01 0.0362 0.099 0.367 B_Naive2 L2
ENSG00000226571 AL592429.2 163250 sc-eQTL 5.00e-01 -0.0614 0.0908 0.367 B_Naive2 L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 9.60e-01 -0.00469 0.0934 0.377 CD4_CTL L2
ENSG00000112406 HECA 299532 sc-eQTL 6.16e-01 -0.0474 0.0943 0.377 CD4_CTL L2
ENSG00000135597 REPS1 446351 sc-eQTL 7.88e-01 -0.0246 0.0916 0.377 CD4_CTL L2
ENSG00000146386 ABRACL 405867 sc-eQTL 9.01e-01 -0.0104 0.0835 0.377 CD4_CTL L2
ENSG00000164442 CITED2 59964 sc-eQTL 4.14e-01 0.0686 0.0837 0.377 CD4_CTL L2
ENSG00000231329 AL031772.1 194959 sc-eQTL 2.84e-01 -0.0926 0.0862 0.377 CD4_CTL L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 8.03e-01 0.0228 0.0916 0.37 CD4_Naive L2
ENSG00000112406 HECA 299532 sc-eQTL 5.78e-01 -0.0396 0.0711 0.37 CD4_Naive L2
ENSG00000135597 REPS1 446351 sc-eQTL 8.83e-02 -0.107 0.0627 0.37 CD4_Naive L2
ENSG00000146386 ABRACL 405867 sc-eQTL 2.22e-02 -0.0968 0.042 0.37 CD4_Naive L2
ENSG00000164442 CITED2 59964 sc-eQTL 4.46e-01 0.055 0.0721 0.37 CD4_Naive L2
ENSG00000231329 AL031772.1 194959 sc-eQTL 5.46e-01 -0.0441 0.073 0.37 CD4_Naive L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 1.79e-01 0.122 0.0903 0.37 CD4_TCM L2
ENSG00000112406 HECA 299532 sc-eQTL 8.02e-01 0.0183 0.0725 0.37 CD4_TCM L2
ENSG00000135597 REPS1 446351 sc-eQTL 8.38e-01 0.014 0.0688 0.37 CD4_TCM L2
ENSG00000146386 ABRACL 405867 sc-eQTL 9.62e-01 -0.0025 0.0529 0.37 CD4_TCM L2
ENSG00000164442 CITED2 59964 sc-eQTL 3.46e-01 0.0741 0.0785 0.37 CD4_TCM L2
ENSG00000231329 AL031772.1 194959 sc-eQTL 4.56e-02 0.169 0.0842 0.37 CD4_TCM L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 2.09e-01 0.131 0.104 0.37 CD4_TEM L2
ENSG00000112406 HECA 299532 sc-eQTL 3.68e-01 -0.073 0.0809 0.37 CD4_TEM L2
ENSG00000135597 REPS1 446351 sc-eQTL 4.74e-01 0.0632 0.0882 0.37 CD4_TEM L2
ENSG00000146386 ABRACL 405867 sc-eQTL 9.61e-01 0.00306 0.0629 0.37 CD4_TEM L2
ENSG00000164442 CITED2 59964 sc-eQTL 4.70e-01 0.0597 0.0825 0.37 CD4_TEM L2
ENSG00000231329 AL031772.1 194959 sc-eQTL 9.52e-01 0.00519 0.0864 0.37 CD4_TEM L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 4.73e-01 -0.0732 0.102 0.37 CD8_CTL L2
ENSG00000112406 HECA 299532 sc-eQTL 4.04e-02 -0.152 0.0735 0.37 CD8_CTL L2
ENSG00000135597 REPS1 446351 sc-eQTL 7.12e-01 0.0294 0.0795 0.37 CD8_CTL L2
ENSG00000146386 ABRACL 405867 sc-eQTL 5.73e-01 0.0362 0.0642 0.37 CD8_CTL L2
ENSG00000164442 CITED2 59964 sc-eQTL 7.23e-01 0.0266 0.0748 0.37 CD8_CTL L2
ENSG00000231329 AL031772.1 194959 sc-eQTL 9.30e-01 -0.00787 0.0898 0.37 CD8_CTL L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 2.88e-02 0.212 0.0962 0.37 CD8_Naive L2
ENSG00000112406 HECA 299532 sc-eQTL 1.45e-01 -0.109 0.0748 0.37 CD8_Naive L2
ENSG00000135597 REPS1 446351 sc-eQTL 8.12e-01 0.0179 0.0753 0.37 CD8_Naive L2
ENSG00000146386 ABRACL 405867 sc-eQTL 1.30e-02 -0.0976 0.0389 0.37 CD8_Naive L2
ENSG00000164442 CITED2 59964 sc-eQTL 1.25e-01 0.122 0.0794 0.37 CD8_Naive L2
ENSG00000231329 AL031772.1 194959 sc-eQTL 8.51e-01 0.0172 0.0914 0.37 CD8_Naive L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 3.73e-01 0.0987 0.11 0.359 CD8_TCM L2
ENSG00000112406 HECA 299532 sc-eQTL 3.50e-01 -0.0756 0.0807 0.359 CD8_TCM L2
ENSG00000135597 REPS1 446351 sc-eQTL 7.95e-01 -0.0219 0.0841 0.359 CD8_TCM L2
ENSG00000146386 ABRACL 405867 sc-eQTL 5.31e-01 -0.0525 0.0837 0.359 CD8_TCM L2
ENSG00000164442 CITED2 59964 sc-eQTL 3.72e-01 0.0768 0.086 0.359 CD8_TCM L2
ENSG00000231329 AL031772.1 194959 sc-eQTL 2.59e-01 0.103 0.0906 0.359 CD8_TCM L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 5.09e-01 -0.0679 0.103 0.361 CD8_TEM L2
ENSG00000112406 HECA 299532 sc-eQTL 8.38e-01 -0.0197 0.0962 0.361 CD8_TEM L2
ENSG00000135597 REPS1 446351 sc-eQTL 5.36e-01 0.0621 0.1 0.361 CD8_TEM L2
ENSG00000146386 ABRACL 405867 sc-eQTL 7.55e-01 -0.0241 0.0772 0.361 CD8_TEM L2
ENSG00000164442 CITED2 59964 sc-eQTL 5.98e-01 0.0442 0.0838 0.361 CD8_TEM L2
ENSG00000231329 AL031772.1 194959 sc-eQTL 9.20e-01 -0.00955 0.0954 0.361 CD8_TEM L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 9.94e-02 -0.179 0.108 0.372 MAIT L2
ENSG00000112406 HECA 299532 sc-eQTL 5.67e-01 -0.0474 0.0826 0.372 MAIT L2
ENSG00000135597 REPS1 446351 sc-eQTL 5.24e-01 -0.0569 0.089 0.372 MAIT L2
ENSG00000146386 ABRACL 405867 sc-eQTL 9.93e-01 0.000546 0.0655 0.372 MAIT L2
ENSG00000164442 CITED2 59964 sc-eQTL 8.18e-01 0.0178 0.0771 0.372 MAIT L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 5.61e-01 -0.0588 0.101 0.371 NK_CD56bright L2
ENSG00000112406 HECA 299532 sc-eQTL 4.02e-01 -0.0768 0.0914 0.371 NK_CD56bright L2
ENSG00000135597 REPS1 446351 sc-eQTL 2.95e-01 0.0894 0.0851 0.371 NK_CD56bright L2
ENSG00000146386 ABRACL 405867 sc-eQTL 7.94e-01 0.0206 0.0786 0.371 NK_CD56bright L2
ENSG00000164442 CITED2 59964 sc-eQTL 7.59e-01 0.026 0.0843 0.371 NK_CD56bright L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 2.48e-01 0.107 0.0921 0.373 NK_CD56dim L2
ENSG00000112406 HECA 299532 sc-eQTL 6.36e-01 -0.0376 0.0794 0.373 NK_CD56dim L2
ENSG00000135597 REPS1 446351 sc-eQTL 2.66e-01 -0.0837 0.0751 0.373 NK_CD56dim L2
ENSG00000146386 ABRACL 405867 sc-eQTL 7.95e-01 -0.0133 0.051 0.373 NK_CD56dim L2
ENSG00000164442 CITED2 59964 sc-eQTL 3.12e-01 0.0688 0.0678 0.373 NK_CD56dim L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 9.59e-02 -0.172 0.103 0.374 NK_HLA L2
ENSG00000112406 HECA 299532 sc-eQTL 3.62e-01 -0.0883 0.0967 0.374 NK_HLA L2
ENSG00000135597 REPS1 446351 sc-eQTL 1.81e-02 0.225 0.0943 0.374 NK_HLA L2
ENSG00000146386 ABRACL 405867 sc-eQTL 7.18e-01 0.0284 0.0786 0.374 NK_HLA L2
ENSG00000164442 CITED2 59964 sc-eQTL 8.54e-01 -0.0155 0.084 0.374 NK_HLA L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 1.48e-01 0.137 0.0939 0.373 NK_cytokine L2
ENSG00000112406 HECA 299532 sc-eQTL 4.43e-01 -0.0624 0.0812 0.373 NK_cytokine L2
ENSG00000135597 REPS1 446351 sc-eQTL 1.77e-01 -0.113 0.0836 0.373 NK_cytokine L2
ENSG00000146386 ABRACL 405867 sc-eQTL 7.26e-01 0.019 0.0541 0.373 NK_cytokine L2
ENSG00000164442 CITED2 59964 sc-eQTL 5.91e-01 -0.038 0.0706 0.373 NK_cytokine L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 1.30e-01 -0.157 0.103 0.385 PB L2
ENSG00000112406 HECA 299532 sc-eQTL 6.08e-01 0.0583 0.113 0.385 PB L2
ENSG00000135597 REPS1 446351 sc-eQTL 7.19e-01 0.0364 0.101 0.385 PB L2
ENSG00000146386 ABRACL 405867 sc-eQTL 2.88e-01 0.075 0.0703 0.385 PB L2
ENSG00000164440 TXLNB 142614 sc-eQTL 7.83e-01 -0.0285 0.103 0.385 PB L2
ENSG00000164442 CITED2 59964 sc-eQTL 5.23e-02 -0.15 0.0764 0.385 PB L2
ENSG00000226571 AL592429.2 163250 sc-eQTL 2.88e-01 -0.111 0.104 0.385 PB L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 3.00e-01 -0.105 0.101 0.365 Pro_T L2
ENSG00000112406 HECA 299532 sc-eQTL 5.92e-02 0.15 0.0792 0.365 Pro_T L2
ENSG00000135597 REPS1 446351 sc-eQTL 4.11e-01 0.0773 0.0939 0.365 Pro_T L2
ENSG00000146386 ABRACL 405867 sc-eQTL 4.07e-02 -0.124 0.06 0.365 Pro_T L2
ENSG00000164442 CITED2 59964 sc-eQTL 6.22e-01 0.0356 0.0722 0.365 Pro_T L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 5.30e-01 0.0619 0.0984 0.37 Treg L2
ENSG00000112406 HECA 299532 sc-eQTL 6.48e-01 -0.0374 0.0818 0.37 Treg L2
ENSG00000135597 REPS1 446351 sc-eQTL 7.21e-01 0.0303 0.0847 0.37 Treg L2
ENSG00000146386 ABRACL 405867 sc-eQTL 3.18e-01 0.0721 0.072 0.37 Treg L2
ENSG00000164442 CITED2 59964 sc-eQTL 4.35e-01 0.063 0.0804 0.37 Treg L2
ENSG00000231329 AL031772.1 194959 sc-eQTL 8.66e-01 0.0156 0.0921 0.37 Treg L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 6.21e-01 0.0465 0.0939 0.383 cDC L2
ENSG00000112406 HECA 299532 sc-eQTL 4.07e-01 -0.0742 0.0892 0.383 cDC L2
ENSG00000135540 NHSL1 742041 sc-eQTL 1.88e-01 -0.115 0.0871 0.383 cDC L2
ENSG00000135597 REPS1 446351 sc-eQTL 4.93e-01 0.0691 0.101 0.383 cDC L2
ENSG00000146386 ABRACL 405867 sc-eQTL 7.85e-01 0.0225 0.0824 0.383 cDC L2
ENSG00000164442 CITED2 59964 sc-eQTL 7.87e-01 -0.0236 0.0874 0.383 cDC L2
ENSG00000225177 AL590617.2 742064 sc-eQTL 2.76e-01 0.105 0.0962 0.383 cDC L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 3.37e-01 0.0732 0.076 0.37 cMono_IL1B L2
ENSG00000112406 HECA 299532 sc-eQTL 3.54e-01 -0.0584 0.0628 0.37 cMono_IL1B L2
ENSG00000135540 NHSL1 742041 sc-eQTL 6.54e-01 0.0412 0.0916 0.37 cMono_IL1B L2
ENSG00000135597 REPS1 446351 sc-eQTL 4.04e-01 -0.0684 0.0817 0.37 cMono_IL1B L2
ENSG00000146386 ABRACL 405867 sc-eQTL 5.08e-01 0.0456 0.0688 0.37 cMono_IL1B L2
ENSG00000164442 CITED2 59964 sc-eQTL 8.58e-01 0.0129 0.072 0.37 cMono_IL1B L2
ENSG00000225177 AL590617.2 742064 sc-eQTL 1.95e-02 0.223 0.0948 0.37 cMono_IL1B L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 9.52e-02 0.144 0.0859 0.37 cMono_S100A L2
ENSG00000112406 HECA 299532 sc-eQTL 6.47e-01 -0.0335 0.0731 0.37 cMono_S100A L2
ENSG00000135540 NHSL1 742041 sc-eQTL 2.33e-01 0.11 0.0923 0.37 cMono_S100A L2
ENSG00000135597 REPS1 446351 sc-eQTL 8.36e-01 0.0182 0.0876 0.37 cMono_S100A L2
ENSG00000146386 ABRACL 405867 sc-eQTL 9.89e-01 -0.00101 0.0762 0.37 cMono_S100A L2
ENSG00000164442 CITED2 59964 sc-eQTL 6.36e-01 0.0357 0.0754 0.37 cMono_S100A L2
ENSG00000225177 AL590617.2 742064 sc-eQTL 1.56e-02 0.244 0.1 0.37 cMono_S100A L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 8.91e-01 0.0158 0.115 0.361 gdT L2
ENSG00000112406 HECA 299532 sc-eQTL 6.68e-01 -0.0469 0.109 0.361 gdT L2
ENSG00000135597 REPS1 446351 sc-eQTL 6.50e-01 0.0514 0.113 0.361 gdT L2
ENSG00000146386 ABRACL 405867 sc-eQTL 1.48e-01 -0.123 0.0844 0.361 gdT L2
ENSG00000164442 CITED2 59964 sc-eQTL 2.75e-01 0.107 0.0976 0.361 gdT L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 8.60e-01 -0.0179 0.101 0.373 intMono L2
ENSG00000112406 HECA 299532 sc-eQTL 6.63e-01 -0.0363 0.0832 0.373 intMono L2
ENSG00000135540 NHSL1 742041 sc-eQTL 6.56e-01 -0.0409 0.0917 0.373 intMono L2
ENSG00000135597 REPS1 446351 sc-eQTL 1.39e-01 -0.14 0.0943 0.373 intMono L2
ENSG00000146386 ABRACL 405867 sc-eQTL 9.85e-01 0.00158 0.0865 0.373 intMono L2
ENSG00000164442 CITED2 59964 sc-eQTL 4.56e-01 -0.0626 0.0838 0.373 intMono L2
ENSG00000225177 AL590617.2 742064 sc-eQTL 1.21e-01 0.159 0.102 0.373 intMono L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 1.44e-01 0.134 0.0916 0.362 ncMono L2
ENSG00000112406 HECA 299532 sc-eQTL 7.67e-01 0.025 0.0841 0.362 ncMono L2
ENSG00000135540 NHSL1 742041 sc-eQTL 4.35e-01 0.069 0.0883 0.362 ncMono L2
ENSG00000135597 REPS1 446351 sc-eQTL 1.76e-01 -0.0902 0.0663 0.362 ncMono L2
ENSG00000146386 ABRACL 405867 sc-eQTL 9.59e-01 0.00409 0.0803 0.362 ncMono L2
ENSG00000164442 CITED2 59964 sc-eQTL 7.41e-01 -0.0225 0.0681 0.362 ncMono L2
ENSG00000225177 AL590617.2 742064 sc-eQTL 7.83e-01 0.0271 0.0982 0.362 ncMono L2
ENSG00000024862 CCDC28A 661103 sc-eQTL 9.24e-01 -0.00988 0.104 0.381 pDC L2
ENSG00000112406 HECA 299532 sc-eQTL 1.21e-01 -0.136 0.087 0.381 pDC L2
ENSG00000135540 NHSL1 742041 sc-eQTL 4.12e-02 0.163 0.0791 0.381 pDC L2
ENSG00000135597 REPS1 446351 sc-eQTL 5.46e-01 -0.0491 0.0811 0.381 pDC L2
ENSG00000146386 ABRACL 405867 sc-eQTL 4.23e-01 -0.0712 0.0885 0.381 pDC L2
ENSG00000164442 CITED2 59964 sc-eQTL 8.96e-01 0.0136 0.104 0.381 pDC L2
ENSG00000225177 AL590617.2 742064 sc-eQTL 4.92e-02 0.158 0.0795 0.381 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 661103 sc-eQTL 6.31e-01 0.0459 0.0956 0.37 B_Memory LOneK1K
ENSG00000112406 HECA 299532 sc-eQTL 8.92e-01 -0.0116 0.0851 0.37 B_Memory LOneK1K
ENSG00000135597 REPS1 446351 sc-eQTL 5.93e-01 0.0472 0.0882 0.37 B_Memory LOneK1K
ENSG00000146386 ABRACL 405867 sc-eQTL 7.86e-01 -0.0166 0.0611 0.37 B_Memory LOneK1K
ENSG00000164440 TXLNB 142614 sc-eQTL 7.81e-02 -0.178 0.101 0.37 B_Memory LOneK1K
ENSG00000164442 CITED2 59964 sc-eQTL 4.52e-02 0.171 0.0851 0.37 B_Memory LOneK1K
ENSG00000226571 AL592429.2 163250 sc-eQTL 4.76e-01 0.0712 0.0998 0.37 B_Memory LOneK1K
ENSG00000024862 CCDC28A 661103 sc-eQTL 1.26e-01 -0.138 0.0898 0.37 B_Naive LOneK1K
ENSG00000112406 HECA 299532 sc-eQTL 1.15e-01 -0.133 0.0839 0.37 B_Naive LOneK1K
ENSG00000135597 REPS1 446351 sc-eQTL 2.87e-01 0.0766 0.0718 0.37 B_Naive LOneK1K
ENSG00000146386 ABRACL 405867 sc-eQTL 5.89e-01 -0.0273 0.0505 0.37 B_Naive LOneK1K
ENSG00000164440 TXLNB 142614 sc-eQTL 6.07e-01 -0.0545 0.106 0.37 B_Naive LOneK1K
ENSG00000164442 CITED2 59964 sc-eQTL 1.18e-01 0.12 0.0764 0.37 B_Naive LOneK1K
ENSG00000226571 AL592429.2 163250 sc-eQTL 8.46e-01 0.0176 0.0902 0.37 B_Naive LOneK1K
ENSG00000024862 CCDC28A 661103 sc-eQTL 5.06e-02 0.137 0.0695 0.37 CD14_Mono LOneK1K
ENSG00000112406 HECA 299532 sc-eQTL 3.40e-01 -0.06 0.0628 0.37 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 742041 sc-eQTL 3.81e-01 0.0805 0.0918 0.37 CD14_Mono LOneK1K
ENSG00000135597 REPS1 446351 sc-eQTL 6.67e-01 -0.0326 0.0756 0.37 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 405867 sc-eQTL 6.89e-01 0.0269 0.0672 0.37 CD14_Mono LOneK1K
ENSG00000164442 CITED2 59964 sc-eQTL 7.61e-01 0.0224 0.0736 0.37 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 742064 sc-eQTL 3.63e-03 0.284 0.0967 0.37 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 661103 sc-eQTL 4.79e-01 0.0664 0.0937 0.373 CD16_Mono LOneK1K
ENSG00000112406 HECA 299532 sc-eQTL 9.36e-01 0.00648 0.0801 0.373 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 742041 sc-eQTL 6.03e-01 -0.0463 0.089 0.373 CD16_Mono LOneK1K
ENSG00000135597 REPS1 446351 sc-eQTL 1.45e-01 -0.0807 0.0552 0.373 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 405867 sc-eQTL 7.53e-01 0.0255 0.0811 0.373 CD16_Mono LOneK1K
ENSG00000164442 CITED2 59964 sc-eQTL 9.00e-01 -0.00879 0.0699 0.373 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 742064 sc-eQTL 2.35e-01 0.117 0.0981 0.373 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 661103 sc-eQTL 2.45e-01 0.104 0.0891 0.373 NK_CD56dim LOneK1K
ENSG00000112406 HECA 299532 sc-eQTL 5.91e-01 -0.041 0.0762 0.373 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 446351 sc-eQTL 5.02e-01 -0.05 0.0744 0.373 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 405867 sc-eQTL 8.42e-01 -0.0096 0.0481 0.373 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 59964 sc-eQTL 5.30e-01 0.0436 0.0694 0.373 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000135540 NHSL1 742041 eQTL 0.012 0.0625 0.0248 0.0 0.0 0.34
ENSG00000279968 GVQW2 660960 eQTL 0.00193 0.141 0.0453 0.0 0.0 0.34

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000024862 \N 661103 4.89e-07 1.78e-07 6.57e-08 2.26e-07 1.03e-07 8.33e-08 1.99e-07 5.48e-08 1.66e-07 9.35e-08 1.61e-07 1.46e-07 2.38e-07 8.07e-08 6.12e-08 1.06e-07 5.42e-08 2.04e-07 7.18e-08 5.75e-08 1.25e-07 1.7e-07 1.68e-07 2.83e-08 2.37e-07 1.51e-07 1.19e-07 1.17e-07 1.32e-07 1.06e-07 1.27e-07 6.68e-08 3.21e-08 9.3e-08 3.4e-08 4.6e-08 6.04e-08 8.63e-08 5.84e-08 6.67e-08 6.21e-08 2e-07 4.87e-08 1.32e-08 3.07e-08 1.01e-08 1.22e-07 0.0 4.83e-08
ENSG00000135540 NHSL1 742041 3.53e-07 1.53e-07 6.04e-08 2.15e-07 9.79e-08 9.91e-08 1.67e-07 5.37e-08 1.5e-07 6.4e-08 1.63e-07 1.19e-07 1.87e-07 7.64e-08 5.94e-08 8.71e-08 4.18e-08 1.64e-07 6.07e-08 5.04e-08 1.21e-07 1.31e-07 1.58e-07 3.03e-08 1.85e-07 1.26e-07 1.13e-07 1.04e-07 1.24e-07 1e-07 1.09e-07 4.51e-08 3.73e-08 8.23e-08 6.34e-08 2.74e-08 4.28e-08 9.36e-08 6.28e-08 5.13e-08 5.28e-08 1.6e-07 5.21e-08 1.26e-08 3.42e-08 1.77e-08 1.22e-07 2e-09 4.82e-08
ENSG00000225177 \N 742064 3.53e-07 1.53e-07 6.04e-08 2.15e-07 9.79e-08 9.91e-08 1.67e-07 5.37e-08 1.5e-07 6.4e-08 1.63e-07 1.19e-07 1.87e-07 7.64e-08 5.94e-08 8.71e-08 4.18e-08 1.64e-07 6.07e-08 5.04e-08 1.21e-07 1.31e-07 1.58e-07 3.03e-08 1.85e-07 1.26e-07 1.13e-07 1.04e-07 1.24e-07 1e-07 1.09e-07 4.51e-08 3.73e-08 8.23e-08 6.34e-08 2.74e-08 4.28e-08 9.36e-08 6.28e-08 5.13e-08 5.28e-08 1.6e-07 5.21e-08 1.26e-08 3.42e-08 1.77e-08 1.22e-07 2e-09 4.82e-08