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Genes within 1Mb (chr6:139428843:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 655334 sc-eQTL 7.56e-01 0.0254 0.0818 0.291 B L1
ENSG00000112406 HECA 293763 sc-eQTL 7.32e-01 -0.0273 0.0796 0.291 B L1
ENSG00000135597 REPS1 440582 sc-eQTL 9.80e-01 -0.00179 0.0703 0.291 B L1
ENSG00000146386 ABRACL 400098 sc-eQTL 4.12e-01 -0.0339 0.0412 0.291 B L1
ENSG00000164440 TXLNB 136845 sc-eQTL 5.99e-01 -0.0533 0.101 0.291 B L1
ENSG00000164442 CITED2 54195 sc-eQTL 4.24e-01 0.051 0.0637 0.291 B L1
ENSG00000226571 AL592429.2 157481 sc-eQTL 5.22e-01 0.0454 0.0708 0.291 B L1
ENSG00000024862 CCDC28A 655334 sc-eQTL 3.70e-01 0.0801 0.0891 0.291 CD4T L1
ENSG00000112406 HECA 293763 sc-eQTL 6.32e-01 -0.0357 0.0744 0.291 CD4T L1
ENSG00000135597 REPS1 440582 sc-eQTL 1.56e-01 -0.0829 0.0583 0.291 CD4T L1
ENSG00000146386 ABRACL 400098 sc-eQTL 5.14e-01 -0.028 0.0429 0.291 CD4T L1
ENSG00000164442 CITED2 54195 sc-eQTL 5.14e-01 -0.0479 0.0732 0.291 CD4T L1
ENSG00000231329 AL031772.1 189190 sc-eQTL 8.64e-01 0.0124 0.0723 0.291 CD4T L1
ENSG00000024862 CCDC28A 655334 sc-eQTL 6.02e-02 0.184 0.0975 0.291 CD8T L1
ENSG00000112406 HECA 293763 sc-eQTL 2.01e-01 -0.09 0.0701 0.291 CD8T L1
ENSG00000135597 REPS1 440582 sc-eQTL 8.73e-01 -0.0106 0.0662 0.291 CD8T L1
ENSG00000146386 ABRACL 400098 sc-eQTL 7.55e-01 0.0118 0.0377 0.291 CD8T L1
ENSG00000164442 CITED2 54195 sc-eQTL 7.43e-01 -0.0235 0.0715 0.291 CD8T L1
ENSG00000231329 AL031772.1 189190 sc-eQTL 9.63e-01 0.00405 0.0869 0.291 CD8T L1
ENSG00000024862 CCDC28A 655334 sc-eQTL 3.36e-01 0.0925 0.0959 0.3 DC L1
ENSG00000112406 HECA 293763 sc-eQTL 6.39e-01 -0.0371 0.0791 0.3 DC L1
ENSG00000135540 NHSL1 736272 sc-eQTL 6.84e-01 0.0359 0.0881 0.3 DC L1
ENSG00000135597 REPS1 440582 sc-eQTL 2.21e-01 0.0954 0.0776 0.3 DC L1
ENSG00000146386 ABRACL 400098 sc-eQTL 1.91e-01 0.0997 0.076 0.3 DC L1
ENSG00000164442 CITED2 54195 sc-eQTL 6.76e-01 -0.0379 0.0905 0.3 DC L1
ENSG00000225177 AL590617.2 736295 sc-eQTL 4.64e-01 0.0674 0.092 0.3 DC L1
ENSG00000024862 CCDC28A 655334 sc-eQTL 2.79e-01 0.078 0.0718 0.291 Mono L1
ENSG00000112406 HECA 293763 sc-eQTL 5.50e-01 -0.0393 0.0656 0.291 Mono L1
ENSG00000135540 NHSL1 736272 sc-eQTL 3.67e-01 0.085 0.0939 0.291 Mono L1
ENSG00000135597 REPS1 440582 sc-eQTL 1.22e-01 -0.0852 0.0548 0.291 Mono L1
ENSG00000146386 ABRACL 400098 sc-eQTL 2.94e-01 0.0753 0.0715 0.291 Mono L1
ENSG00000164442 CITED2 54195 sc-eQTL 7.55e-01 0.0237 0.0758 0.291 Mono L1
ENSG00000225177 AL590617.2 736295 sc-eQTL 2.20e-01 0.12 0.0975 0.291 Mono L1
ENSG00000024862 CCDC28A 655334 sc-eQTL 6.85e-01 0.0354 0.0871 0.292 NK L1
ENSG00000112406 HECA 293763 sc-eQTL 6.46e-01 -0.0347 0.0753 0.292 NK L1
ENSG00000135597 REPS1 440582 sc-eQTL 9.16e-01 0.00759 0.0717 0.292 NK L1
ENSG00000146386 ABRACL 400098 sc-eQTL 9.12e-01 0.00583 0.0524 0.292 NK L1
ENSG00000164442 CITED2 54195 sc-eQTL 8.47e-01 0.0135 0.0696 0.292 NK L1
ENSG00000024862 CCDC28A 655334 sc-eQTL 4.29e-01 -0.0807 0.102 0.291 Other_T L1
ENSG00000112406 HECA 293763 sc-eQTL 6.10e-01 -0.0377 0.0738 0.291 Other_T L1
ENSG00000135597 REPS1 440582 sc-eQTL 6.96e-01 -0.031 0.0794 0.291 Other_T L1
ENSG00000146386 ABRACL 400098 sc-eQTL 3.13e-01 0.0525 0.0519 0.291 Other_T L1
ENSG00000164442 CITED2 54195 sc-eQTL 3.99e-01 -0.0513 0.0608 0.291 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 655334 sc-eQTL 2.55e-01 -0.131 0.115 0.291 B_Activated L2
ENSG00000112406 HECA 293763 sc-eQTL 6.18e-01 0.0548 0.11 0.291 B_Activated L2
ENSG00000135597 REPS1 440582 sc-eQTL 1.55e-01 -0.163 0.114 0.291 B_Activated L2
ENSG00000146386 ABRACL 400098 sc-eQTL 9.82e-01 -0.00229 0.104 0.291 B_Activated L2
ENSG00000164440 TXLNB 136845 sc-eQTL 2.76e-01 0.097 0.0887 0.291 B_Activated L2
ENSG00000164442 CITED2 54195 sc-eQTL 3.04e-01 0.115 0.112 0.291 B_Activated L2
ENSG00000226571 AL592429.2 157481 sc-eQTL 6.14e-01 0.0566 0.112 0.291 B_Activated L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 4.77e-01 0.0709 0.0996 0.29 B_Intermediate L2
ENSG00000112406 HECA 293763 sc-eQTL 9.07e-01 -0.0101 0.0864 0.29 B_Intermediate L2
ENSG00000135597 REPS1 440582 sc-eQTL 2.43e-01 -0.109 0.0929 0.29 B_Intermediate L2
ENSG00000146386 ABRACL 400098 sc-eQTL 9.99e-01 -6.15e-05 0.0793 0.29 B_Intermediate L2
ENSG00000164440 TXLNB 136845 sc-eQTL 9.42e-01 0.00709 0.0972 0.29 B_Intermediate L2
ENSG00000164442 CITED2 54195 sc-eQTL 5.64e-02 0.17 0.0886 0.29 B_Intermediate L2
ENSG00000226571 AL592429.2 157481 sc-eQTL 1.17e-01 0.151 0.0962 0.29 B_Intermediate L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 2.99e-01 0.106 0.102 0.287 B_Memory L2
ENSG00000112406 HECA 293763 sc-eQTL 8.55e-01 -0.0162 0.0886 0.287 B_Memory L2
ENSG00000135597 REPS1 440582 sc-eQTL 1.29e-01 0.145 0.0955 0.287 B_Memory L2
ENSG00000146386 ABRACL 400098 sc-eQTL 5.31e-01 -0.0477 0.0759 0.287 B_Memory L2
ENSG00000164440 TXLNB 136845 sc-eQTL 5.71e-02 -0.184 0.0961 0.287 B_Memory L2
ENSG00000164442 CITED2 54195 sc-eQTL 2.30e-02 0.202 0.088 0.287 B_Memory L2
ENSG00000226571 AL592429.2 157481 sc-eQTL 2.00e-01 -0.14 0.109 0.287 B_Memory L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 7.22e-01 -0.0349 0.0978 0.291 B_Naive1 L2
ENSG00000112406 HECA 293763 sc-eQTL 5.22e-01 -0.0546 0.0852 0.291 B_Naive1 L2
ENSG00000135597 REPS1 440582 sc-eQTL 2.18e-01 0.0971 0.0786 0.291 B_Naive1 L2
ENSG00000146386 ABRACL 400098 sc-eQTL 9.88e-01 -0.000841 0.0552 0.291 B_Naive1 L2
ENSG00000164440 TXLNB 136845 sc-eQTL 4.78e-01 0.0734 0.103 0.291 B_Naive1 L2
ENSG00000164442 CITED2 54195 sc-eQTL 4.90e-01 0.0519 0.0751 0.291 B_Naive1 L2
ENSG00000226571 AL592429.2 157481 sc-eQTL 4.97e-01 0.0671 0.0985 0.291 B_Naive1 L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 3.91e-01 -0.0816 0.0949 0.288 B_Naive2 L2
ENSG00000112406 HECA 293763 sc-eQTL 4.47e-01 -0.0681 0.0893 0.288 B_Naive2 L2
ENSG00000135597 REPS1 440582 sc-eQTL 5.92e-01 0.0457 0.0853 0.288 B_Naive2 L2
ENSG00000146386 ABRACL 400098 sc-eQTL 1.27e-01 -0.0957 0.0625 0.288 B_Naive2 L2
ENSG00000164440 TXLNB 136845 sc-eQTL 8.98e-01 0.0127 0.0995 0.288 B_Naive2 L2
ENSG00000164442 CITED2 54195 sc-eQTL 4.79e-01 -0.0719 0.101 0.288 B_Naive2 L2
ENSG00000226571 AL592429.2 157481 sc-eQTL 8.44e-01 0.0184 0.0932 0.288 B_Naive2 L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 7.56e-01 -0.0299 0.0962 0.298 CD4_CTL L2
ENSG00000112406 HECA 293763 sc-eQTL 2.20e-01 -0.119 0.0967 0.298 CD4_CTL L2
ENSG00000135597 REPS1 440582 sc-eQTL 3.16e-01 -0.0946 0.0941 0.298 CD4_CTL L2
ENSG00000146386 ABRACL 400098 sc-eQTL 9.53e-01 0.00505 0.0859 0.298 CD4_CTL L2
ENSG00000164442 CITED2 54195 sc-eQTL 8.05e-01 -0.0214 0.0863 0.298 CD4_CTL L2
ENSG00000231329 AL031772.1 189190 sc-eQTL 5.82e-01 -0.0491 0.089 0.298 CD4_CTL L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 9.83e-01 0.00195 0.0936 0.291 CD4_Naive L2
ENSG00000112406 HECA 293763 sc-eQTL 4.39e-01 -0.0564 0.0727 0.291 CD4_Naive L2
ENSG00000135597 REPS1 440582 sc-eQTL 2.81e-01 -0.0695 0.0644 0.291 CD4_Naive L2
ENSG00000146386 ABRACL 400098 sc-eQTL 6.80e-02 -0.0791 0.0431 0.291 CD4_Naive L2
ENSG00000164442 CITED2 54195 sc-eQTL 4.51e-01 -0.0556 0.0737 0.291 CD4_Naive L2
ENSG00000231329 AL031772.1 189190 sc-eQTL 1.13e-01 -0.118 0.0742 0.291 CD4_Naive L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 3.38e-01 0.0892 0.0928 0.291 CD4_TCM L2
ENSG00000112406 HECA 293763 sc-eQTL 9.73e-01 0.00254 0.0744 0.291 CD4_TCM L2
ENSG00000135597 REPS1 440582 sc-eQTL 4.02e-01 -0.0591 0.0704 0.291 CD4_TCM L2
ENSG00000146386 ABRACL 400098 sc-eQTL 8.49e-01 -0.0103 0.0542 0.291 CD4_TCM L2
ENSG00000164442 CITED2 54195 sc-eQTL 4.82e-01 -0.0568 0.0806 0.291 CD4_TCM L2
ENSG00000231329 AL031772.1 189190 sc-eQTL 1.05e-01 0.141 0.0866 0.291 CD4_TCM L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 5.28e-01 0.067 0.106 0.291 CD4_TEM L2
ENSG00000112406 HECA 293763 sc-eQTL 7.79e-01 -0.0232 0.0826 0.291 CD4_TEM L2
ENSG00000135597 REPS1 440582 sc-eQTL 8.08e-01 0.0218 0.0899 0.291 CD4_TEM L2
ENSG00000146386 ABRACL 400098 sc-eQTL 7.63e-01 0.0194 0.0641 0.291 CD4_TEM L2
ENSG00000164442 CITED2 54195 sc-eQTL 9.12e-01 -0.00934 0.0842 0.291 CD4_TEM L2
ENSG00000231329 AL031772.1 189190 sc-eQTL 4.47e-01 -0.0671 0.088 0.291 CD4_TEM L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 3.08e-01 -0.108 0.106 0.291 CD8_CTL L2
ENSG00000112406 HECA 293763 sc-eQTL 6.49e-02 -0.142 0.0766 0.291 CD8_CTL L2
ENSG00000135597 REPS1 440582 sc-eQTL 3.28e-01 0.081 0.0826 0.291 CD8_CTL L2
ENSG00000146386 ABRACL 400098 sc-eQTL 1.18e-01 0.105 0.0665 0.291 CD8_CTL L2
ENSG00000164442 CITED2 54195 sc-eQTL 5.19e-01 -0.0503 0.0779 0.291 CD8_CTL L2
ENSG00000231329 AL031772.1 189190 sc-eQTL 9.25e-01 -0.00887 0.0935 0.291 CD8_CTL L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 1.27e-02 0.251 0.0999 0.291 CD8_Naive L2
ENSG00000112406 HECA 293763 sc-eQTL 2.31e-01 -0.0936 0.078 0.291 CD8_Naive L2
ENSG00000135597 REPS1 440582 sc-eQTL 8.93e-01 0.0106 0.0785 0.291 CD8_Naive L2
ENSG00000146386 ABRACL 400098 sc-eQTL 1.12e-01 -0.0652 0.0409 0.291 CD8_Naive L2
ENSG00000164442 CITED2 54195 sc-eQTL 9.10e-01 -0.00938 0.0832 0.291 CD8_Naive L2
ENSG00000231329 AL031772.1 189190 sc-eQTL 7.08e-01 -0.0356 0.0952 0.291 CD8_Naive L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 2.49e-01 0.132 0.114 0.285 CD8_TCM L2
ENSG00000112406 HECA 293763 sc-eQTL 6.78e-01 -0.035 0.084 0.285 CD8_TCM L2
ENSG00000135597 REPS1 440582 sc-eQTL 4.49e-01 -0.0662 0.0872 0.285 CD8_TCM L2
ENSG00000146386 ABRACL 400098 sc-eQTL 7.75e-01 0.0249 0.087 0.285 CD8_TCM L2
ENSG00000164442 CITED2 54195 sc-eQTL 8.21e-01 0.0202 0.0894 0.285 CD8_TCM L2
ENSG00000231329 AL031772.1 189190 sc-eQTL 2.04e-01 0.12 0.094 0.285 CD8_TCM L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 8.04e-01 -0.0263 0.106 0.281 CD8_TEM L2
ENSG00000112406 HECA 293763 sc-eQTL 7.14e-01 0.0363 0.0991 0.281 CD8_TEM L2
ENSG00000135597 REPS1 440582 sc-eQTL 3.46e-01 0.0973 0.103 0.281 CD8_TEM L2
ENSG00000146386 ABRACL 400098 sc-eQTL 5.87e-01 0.0433 0.0794 0.281 CD8_TEM L2
ENSG00000164442 CITED2 54195 sc-eQTL 8.50e-01 0.0163 0.0864 0.281 CD8_TEM L2
ENSG00000231329 AL031772.1 189190 sc-eQTL 3.69e-01 0.0883 0.0981 0.281 CD8_TEM L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 2.59e-01 -0.126 0.111 0.292 MAIT L2
ENSG00000112406 HECA 293763 sc-eQTL 1.64e-01 -0.118 0.0842 0.292 MAIT L2
ENSG00000135597 REPS1 440582 sc-eQTL 4.73e-01 -0.0654 0.091 0.292 MAIT L2
ENSG00000146386 ABRACL 400098 sc-eQTL 4.05e-01 0.0559 0.0669 0.292 MAIT L2
ENSG00000164442 CITED2 54195 sc-eQTL 9.98e-01 -0.000233 0.0789 0.292 MAIT L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 8.34e-01 -0.0217 0.104 0.289 NK_CD56bright L2
ENSG00000112406 HECA 293763 sc-eQTL 4.02e-01 -0.0787 0.0937 0.289 NK_CD56bright L2
ENSG00000135597 REPS1 440582 sc-eQTL 2.21e-01 0.107 0.0872 0.289 NK_CD56bright L2
ENSG00000146386 ABRACL 400098 sc-eQTL 1.33e-01 0.121 0.0802 0.289 NK_CD56bright L2
ENSG00000164442 CITED2 54195 sc-eQTL 3.27e-01 0.0848 0.0863 0.289 NK_CD56bright L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 6.91e-01 0.0376 0.0947 0.293 NK_CD56dim L2
ENSG00000112406 HECA 293763 sc-eQTL 6.97e-01 -0.0318 0.0815 0.293 NK_CD56dim L2
ENSG00000135597 REPS1 440582 sc-eQTL 5.16e-01 -0.0502 0.0772 0.293 NK_CD56dim L2
ENSG00000146386 ABRACL 400098 sc-eQTL 6.51e-01 0.0237 0.0523 0.293 NK_CD56dim L2
ENSG00000164442 CITED2 54195 sc-eQTL 6.36e-01 0.033 0.0697 0.293 NK_CD56dim L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 7.16e-02 -0.191 0.106 0.292 NK_HLA L2
ENSG00000112406 HECA 293763 sc-eQTL 9.69e-01 -0.00388 0.0996 0.292 NK_HLA L2
ENSG00000135597 REPS1 440582 sc-eQTL 2.81e-02 0.215 0.0971 0.292 NK_HLA L2
ENSG00000146386 ABRACL 400098 sc-eQTL 8.63e-01 0.0139 0.0808 0.292 NK_HLA L2
ENSG00000164442 CITED2 54195 sc-eQTL 5.15e-01 -0.0563 0.0863 0.292 NK_HLA L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 1.06e-01 0.157 0.097 0.293 NK_cytokine L2
ENSG00000112406 HECA 293763 sc-eQTL 9.15e-01 -0.00899 0.0841 0.293 NK_cytokine L2
ENSG00000135597 REPS1 440582 sc-eQTL 1.01e-01 -0.142 0.0862 0.293 NK_cytokine L2
ENSG00000146386 ABRACL 400098 sc-eQTL 7.36e-01 0.0189 0.0559 0.293 NK_cytokine L2
ENSG00000164442 CITED2 54195 sc-eQTL 4.69e-01 -0.0528 0.0729 0.293 NK_cytokine L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 1.68e-01 -0.148 0.107 0.3 PB L2
ENSG00000112406 HECA 293763 sc-eQTL 8.09e-01 0.0283 0.117 0.3 PB L2
ENSG00000135597 REPS1 440582 sc-eQTL 5.13e-01 0.0682 0.104 0.3 PB L2
ENSG00000146386 ABRACL 400098 sc-eQTL 9.59e-02 0.121 0.0719 0.3 PB L2
ENSG00000164440 TXLNB 136845 sc-eQTL 7.99e-01 0.0271 0.106 0.3 PB L2
ENSG00000164442 CITED2 54195 sc-eQTL 3.38e-03 -0.231 0.0771 0.3 PB L2
ENSG00000226571 AL592429.2 157481 sc-eQTL 1.78e-01 -0.145 0.107 0.3 PB L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 4.01e-01 -0.0892 0.106 0.289 Pro_T L2
ENSG00000112406 HECA 293763 sc-eQTL 6.61e-01 0.0368 0.0836 0.289 Pro_T L2
ENSG00000135597 REPS1 440582 sc-eQTL 1.54e-01 0.14 0.098 0.289 Pro_T L2
ENSG00000146386 ABRACL 400098 sc-eQTL 4.49e-01 -0.0481 0.0634 0.289 Pro_T L2
ENSG00000164442 CITED2 54195 sc-eQTL 9.72e-01 -0.0027 0.0757 0.289 Pro_T L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 6.27e-01 0.0489 0.101 0.291 Treg L2
ENSG00000112406 HECA 293763 sc-eQTL 5.42e-01 -0.0511 0.0836 0.291 Treg L2
ENSG00000135597 REPS1 440582 sc-eQTL 4.30e-01 -0.0684 0.0865 0.291 Treg L2
ENSG00000146386 ABRACL 400098 sc-eQTL 1.29e-01 0.112 0.0734 0.291 Treg L2
ENSG00000164442 CITED2 54195 sc-eQTL 8.05e-01 0.0203 0.0823 0.291 Treg L2
ENSG00000231329 AL031772.1 189190 sc-eQTL 8.47e-01 0.0182 0.0942 0.291 Treg L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 4.92e-01 0.0666 0.0967 0.307 cDC L2
ENSG00000112406 HECA 293763 sc-eQTL 4.40e-01 -0.0712 0.0919 0.307 cDC L2
ENSG00000135540 NHSL1 736272 sc-eQTL 2.36e-01 -0.107 0.0898 0.307 cDC L2
ENSG00000135597 REPS1 440582 sc-eQTL 4.27e-01 0.0826 0.104 0.307 cDC L2
ENSG00000146386 ABRACL 400098 sc-eQTL 3.66e-01 0.0768 0.0847 0.307 cDC L2
ENSG00000164442 CITED2 54195 sc-eQTL 8.10e-01 -0.0217 0.09 0.307 cDC L2
ENSG00000225177 AL590617.2 736295 sc-eQTL 9.63e-01 -0.00467 0.0994 0.307 cDC L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 6.00e-01 0.041 0.0782 0.291 cMono_IL1B L2
ENSG00000112406 HECA 293763 sc-eQTL 7.94e-01 -0.0169 0.0646 0.291 cMono_IL1B L2
ENSG00000135540 NHSL1 736272 sc-eQTL 5.46e-01 0.0569 0.0941 0.291 cMono_IL1B L2
ENSG00000135597 REPS1 440582 sc-eQTL 3.05e-01 -0.0863 0.0838 0.291 cMono_IL1B L2
ENSG00000146386 ABRACL 400098 sc-eQTL 2.91e-01 0.0746 0.0705 0.291 cMono_IL1B L2
ENSG00000164442 CITED2 54195 sc-eQTL 6.21e-01 -0.0366 0.0739 0.291 cMono_IL1B L2
ENSG00000225177 AL590617.2 736295 sc-eQTL 2.95e-01 0.103 0.0983 0.291 cMono_IL1B L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 3.03e-01 0.0921 0.0892 0.291 cMono_S100A L2
ENSG00000112406 HECA 293763 sc-eQTL 8.61e-01 -0.0132 0.0756 0.291 cMono_S100A L2
ENSG00000135540 NHSL1 736272 sc-eQTL 6.54e-01 0.043 0.0958 0.291 cMono_S100A L2
ENSG00000135597 REPS1 440582 sc-eQTL 7.96e-01 0.0234 0.0906 0.291 cMono_S100A L2
ENSG00000146386 ABRACL 400098 sc-eQTL 9.19e-01 0.00804 0.0788 0.291 cMono_S100A L2
ENSG00000164442 CITED2 54195 sc-eQTL 8.43e-01 -0.0154 0.078 0.291 cMono_S100A L2
ENSG00000225177 AL590617.2 736295 sc-eQTL 1.13e-01 0.166 0.104 0.291 cMono_S100A L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 4.82e-01 0.0842 0.119 0.285 gdT L2
ENSG00000112406 HECA 293763 sc-eQTL 8.38e-01 0.0232 0.114 0.285 gdT L2
ENSG00000135597 REPS1 440582 sc-eQTL 9.46e-01 -0.00793 0.118 0.285 gdT L2
ENSG00000146386 ABRACL 400098 sc-eQTL 5.41e-01 -0.0542 0.0884 0.285 gdT L2
ENSG00000164442 CITED2 54195 sc-eQTL 7.40e-01 0.0339 0.102 0.285 gdT L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 3.81e-01 0.0917 0.105 0.291 intMono L2
ENSG00000112406 HECA 293763 sc-eQTL 3.96e-01 -0.0731 0.0858 0.291 intMono L2
ENSG00000135540 NHSL1 736272 sc-eQTL 6.86e-01 -0.0383 0.0948 0.291 intMono L2
ENSG00000135597 REPS1 440582 sc-eQTL 1.49e-01 -0.141 0.0974 0.291 intMono L2
ENSG00000146386 ABRACL 400098 sc-eQTL 6.02e-01 0.0466 0.0893 0.291 intMono L2
ENSG00000164442 CITED2 54195 sc-eQTL 2.10e-01 -0.109 0.0864 0.291 intMono L2
ENSG00000225177 AL590617.2 736295 sc-eQTL 2.34e-01 0.126 0.106 0.291 intMono L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 4.20e-02 0.196 0.0959 0.287 ncMono L2
ENSG00000112406 HECA 293763 sc-eQTL 8.68e-01 0.0147 0.0886 0.287 ncMono L2
ENSG00000135540 NHSL1 736272 sc-eQTL 6.91e-01 0.037 0.0931 0.287 ncMono L2
ENSG00000135597 REPS1 440582 sc-eQTL 2.57e-01 -0.0795 0.0699 0.287 ncMono L2
ENSG00000146386 ABRACL 400098 sc-eQTL 4.06e-01 0.0703 0.0844 0.287 ncMono L2
ENSG00000164442 CITED2 54195 sc-eQTL 5.23e-01 -0.0459 0.0717 0.287 ncMono L2
ENSG00000225177 AL590617.2 736295 sc-eQTL 9.60e-01 0.00514 0.103 0.287 ncMono L2
ENSG00000024862 CCDC28A 655334 sc-eQTL 8.04e-01 -0.0268 0.108 0.302 pDC L2
ENSG00000112406 HECA 293763 sc-eQTL 3.53e-01 -0.0851 0.0912 0.302 pDC L2
ENSG00000135540 NHSL1 736272 sc-eQTL 8.79e-04 0.274 0.0807 0.302 pDC L2
ENSG00000135597 REPS1 440582 sc-eQTL 4.61e-01 -0.0625 0.0845 0.302 pDC L2
ENSG00000146386 ABRACL 400098 sc-eQTL 7.58e-01 -0.0285 0.0925 0.302 pDC L2
ENSG00000164442 CITED2 54195 sc-eQTL 6.44e-01 0.0504 0.109 0.302 pDC L2
ENSG00000225177 AL590617.2 736295 sc-eQTL 4.48e-02 0.168 0.0829 0.302 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 655334 sc-eQTL 4.40e-01 0.075 0.0969 0.291 B_Memory LOneK1K
ENSG00000112406 HECA 293763 sc-eQTL 7.54e-01 0.0271 0.0863 0.291 B_Memory LOneK1K
ENSG00000135597 REPS1 440582 sc-eQTL 7.49e-01 0.0286 0.0895 0.291 B_Memory LOneK1K
ENSG00000146386 ABRACL 400098 sc-eQTL 9.04e-01 -0.00745 0.062 0.291 B_Memory LOneK1K
ENSG00000164440 TXLNB 136845 sc-eQTL 1.13e-01 -0.163 0.102 0.291 B_Memory LOneK1K
ENSG00000164442 CITED2 54195 sc-eQTL 5.59e-02 0.166 0.0864 0.291 B_Memory LOneK1K
ENSG00000226571 AL592429.2 157481 sc-eQTL 3.24e-01 0.1 0.101 0.291 B_Memory LOneK1K
ENSG00000024862 CCDC28A 655334 sc-eQTL 3.87e-01 -0.0795 0.0916 0.291 B_Naive LOneK1K
ENSG00000112406 HECA 293763 sc-eQTL 3.08e-01 -0.0874 0.0856 0.291 B_Naive LOneK1K
ENSG00000135597 REPS1 440582 sc-eQTL 4.66e-01 0.0533 0.0731 0.291 B_Naive LOneK1K
ENSG00000146386 ABRACL 400098 sc-eQTL 6.14e-01 -0.0259 0.0513 0.291 B_Naive LOneK1K
ENSG00000164440 TXLNB 136845 sc-eQTL 8.35e-01 0.0225 0.107 0.291 B_Naive LOneK1K
ENSG00000164442 CITED2 54195 sc-eQTL 4.96e-01 0.0532 0.078 0.291 B_Naive LOneK1K
ENSG00000226571 AL592429.2 157481 sc-eQTL 3.74e-01 0.0816 0.0916 0.291 B_Naive LOneK1K
ENSG00000024862 CCDC28A 655334 sc-eQTL 3.83e-01 0.0627 0.0718 0.291 CD14_Mono LOneK1K
ENSG00000112406 HECA 293763 sc-eQTL 7.63e-01 -0.0194 0.0645 0.291 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 736272 sc-eQTL 4.14e-01 0.0771 0.0942 0.291 CD14_Mono LOneK1K
ENSG00000135597 REPS1 440582 sc-eQTL 4.67e-01 -0.0565 0.0775 0.291 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 400098 sc-eQTL 5.06e-01 0.046 0.0689 0.291 CD14_Mono LOneK1K
ENSG00000164442 CITED2 54195 sc-eQTL 6.92e-01 -0.03 0.0755 0.291 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 736295 sc-eQTL 7.95e-02 0.177 0.1 0.291 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 655334 sc-eQTL 8.54e-02 0.168 0.0973 0.293 CD16_Mono LOneK1K
ENSG00000112406 HECA 293763 sc-eQTL 7.16e-01 -0.0305 0.0836 0.293 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 736272 sc-eQTL 4.56e-01 -0.0695 0.0929 0.293 CD16_Mono LOneK1K
ENSG00000135597 REPS1 440582 sc-eQTL 1.24e-01 -0.0889 0.0576 0.293 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 400098 sc-eQTL 4.10e-01 0.0698 0.0846 0.293 CD16_Mono LOneK1K
ENSG00000164442 CITED2 54195 sc-eQTL 6.95e-01 -0.0287 0.073 0.293 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 736295 sc-eQTL 6.41e-01 0.0481 0.103 0.293 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 655334 sc-eQTL 5.54e-01 0.0538 0.0907 0.293 NK_CD56dim LOneK1K
ENSG00000112406 HECA 293763 sc-eQTL 8.89e-01 -0.0108 0.0774 0.293 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 440582 sc-eQTL 7.35e-01 -0.0256 0.0757 0.293 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 400098 sc-eQTL 9.80e-01 -0.0012 0.0488 0.293 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 54195 sc-eQTL 9.17e-01 0.00733 0.0706 0.293 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000135540 NHSL1 736272 eQTL 0.0406 0.0546 0.0266 0.0 0.0 0.288
ENSG00000146386 ABRACL 400098 eQTL 0.0132 0.0625 0.0252 0.0 0.0 0.288
ENSG00000279968 GVQW2 655191 eQTL 0.00364 0.141 0.0485 0.0 0.0 0.288

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000135540 NHSL1 736272 2.61e-07 1.1e-07 4.08e-08 1.79e-07 9.01e-08 9.71e-08 1.42e-07 5.19e-08 1.4e-07 4.57e-08 1.56e-07 7.78e-08 1.26e-07 6.38e-08 5.84e-08 7.17e-08 3.88e-08 1.14e-07 6.07e-08 4.21e-08 1.08e-07 1.23e-07 1.32e-07 4.05e-08 1.33e-07 1.19e-07 1.08e-07 9.32e-08 1.03e-07 1.1e-07 9.58e-08 4.09e-08 3.16e-08 8.82e-08 8.82e-08 3.77e-08 4.99e-08 8.93e-08 7.23e-08 3.54e-08 4.51e-08 1.37e-07 5.2e-08 1.13e-08 5.75e-08 1.83e-08 1.22e-07 3.79e-09 4.81e-08
ENSG00000225177 \N 736295 2.61e-07 1.1e-07 4.08e-08 1.79e-07 9.01e-08 9.71e-08 1.42e-07 5.19e-08 1.4e-07 4.57e-08 1.56e-07 7.78e-08 1.26e-07 6.38e-08 5.84e-08 7.17e-08 3.88e-08 1.14e-07 6.07e-08 4.21e-08 1.08e-07 1.23e-07 1.32e-07 4.05e-08 1.33e-07 1.19e-07 1.08e-07 9.32e-08 1.03e-07 1.1e-07 9.58e-08 4.09e-08 3.16e-08 8.82e-08 8.82e-08 3.77e-08 4.99e-08 8.93e-08 7.23e-08 3.54e-08 4.51e-08 1.37e-07 5.2e-08 1.13e-08 5.75e-08 1.83e-08 1.22e-07 3.79e-09 4.81e-08