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Genes within 1Mb (chr6:139411107:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 637598 sc-eQTL 4.32e-01 0.0561 0.0713 0.459 B L1
ENSG00000112406 HECA 276027 sc-eQTL 4.75e-02 0.137 0.0688 0.459 B L1
ENSG00000135597 REPS1 422846 sc-eQTL 1.34e-01 0.0917 0.061 0.459 B L1
ENSG00000146386 ABRACL 382362 sc-eQTL 6.50e-01 -0.0164 0.036 0.459 B L1
ENSG00000164440 TXLNB 119109 sc-eQTL 6.60e-01 0.0389 0.0883 0.459 B L1
ENSG00000164442 CITED2 36459 sc-eQTL 5.71e-01 0.0315 0.0556 0.459 B L1
ENSG00000226571 AL592429.2 139745 sc-eQTL 5.33e-01 -0.0386 0.0618 0.459 B L1
ENSG00000024862 CCDC28A 637598 sc-eQTL 5.38e-01 0.0489 0.0792 0.459 CD4T L1
ENSG00000112406 HECA 276027 sc-eQTL 1.70e-02 0.157 0.0652 0.459 CD4T L1
ENSG00000135597 REPS1 422846 sc-eQTL 6.07e-01 0.0267 0.0519 0.459 CD4T L1
ENSG00000146386 ABRACL 382362 sc-eQTL 4.27e-01 0.0303 0.0381 0.459 CD4T L1
ENSG00000164442 CITED2 36459 sc-eQTL 5.86e-01 0.0355 0.065 0.459 CD4T L1
ENSG00000231329 AL031772.1 171454 sc-eQTL 1.24e-01 0.0984 0.0638 0.459 CD4T L1
ENSG00000024862 CCDC28A 637598 sc-eQTL 6.18e-01 0.0429 0.0859 0.459 CD8T L1
ENSG00000112406 HECA 276027 sc-eQTL 3.76e-02 0.127 0.0609 0.459 CD8T L1
ENSG00000135597 REPS1 422846 sc-eQTL 5.94e-01 -0.0309 0.0578 0.459 CD8T L1
ENSG00000146386 ABRACL 382362 sc-eQTL 5.33e-01 -0.0206 0.0329 0.459 CD8T L1
ENSG00000164442 CITED2 36459 sc-eQTL 4.26e-01 0.0498 0.0624 0.459 CD8T L1
ENSG00000231329 AL031772.1 171454 sc-eQTL 6.56e-01 0.0339 0.0759 0.459 CD8T L1
ENSG00000024862 CCDC28A 637598 sc-eQTL 5.04e-01 -0.0585 0.0875 0.457 DC L1
ENSG00000112406 HECA 276027 sc-eQTL 2.95e-01 0.0755 0.0719 0.457 DC L1
ENSG00000135540 NHSL1 718536 sc-eQTL 9.38e-01 -0.00621 0.0803 0.457 DC L1
ENSG00000135597 REPS1 422846 sc-eQTL 7.15e-01 0.026 0.071 0.457 DC L1
ENSG00000146386 ABRACL 382362 sc-eQTL 3.09e-01 -0.0707 0.0694 0.457 DC L1
ENSG00000164442 CITED2 36459 sc-eQTL 7.86e-01 -0.0225 0.0825 0.457 DC L1
ENSG00000225177 AL590617.2 718559 sc-eQTL 5.38e-01 -0.0517 0.0838 0.457 DC L1
ENSG00000024862 CCDC28A 637598 sc-eQTL 3.64e-01 -0.057 0.0626 0.459 Mono L1
ENSG00000112406 HECA 276027 sc-eQTL 2.47e-01 0.0663 0.0571 0.459 Mono L1
ENSG00000135540 NHSL1 718536 sc-eQTL 7.51e-01 0.0261 0.082 0.459 Mono L1
ENSG00000135597 REPS1 422846 sc-eQTL 9.70e-01 0.00179 0.048 0.459 Mono L1
ENSG00000146386 ABRACL 382362 sc-eQTL 2.03e-01 -0.0795 0.0623 0.459 Mono L1
ENSG00000164442 CITED2 36459 sc-eQTL 4.81e-01 0.0466 0.066 0.459 Mono L1
ENSG00000225177 AL590617.2 718559 sc-eQTL 4.22e-01 -0.0685 0.0852 0.459 Mono L1
ENSG00000024862 CCDC28A 637598 sc-eQTL 7.47e-02 0.14 0.0784 0.461 NK L1
ENSG00000112406 HECA 276027 sc-eQTL 1.06e-01 0.11 0.0678 0.461 NK L1
ENSG00000135597 REPS1 422846 sc-eQTL 7.27e-01 -0.0228 0.065 0.461 NK L1
ENSG00000146386 ABRACL 382362 sc-eQTL 9.22e-01 -0.00463 0.0474 0.461 NK L1
ENSG00000164442 CITED2 36459 sc-eQTL 8.40e-01 0.0127 0.0631 0.461 NK L1
ENSG00000024862 CCDC28A 637598 sc-eQTL 3.90e-01 0.0802 0.0932 0.459 Other_T L1
ENSG00000112406 HECA 276027 sc-eQTL 1.14e-01 0.107 0.0672 0.459 Other_T L1
ENSG00000135597 REPS1 422846 sc-eQTL 2.80e-01 -0.0784 0.0725 0.459 Other_T L1
ENSG00000146386 ABRACL 382362 sc-eQTL 5.64e-01 0.0274 0.0475 0.459 Other_T L1
ENSG00000164442 CITED2 36459 sc-eQTL 9.23e-01 0.00538 0.0557 0.459 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 637598 sc-eQTL 1.28e-01 -0.159 0.104 0.457 B_Activated L2
ENSG00000112406 HECA 276027 sc-eQTL 3.42e-02 0.21 0.0986 0.457 B_Activated L2
ENSG00000135597 REPS1 422846 sc-eQTL 6.02e-01 -0.0546 0.104 0.457 B_Activated L2
ENSG00000146386 ABRACL 382362 sc-eQTL 5.46e-02 -0.181 0.0936 0.457 B_Activated L2
ENSG00000164440 TXLNB 119109 sc-eQTL 4.21e-01 0.0652 0.0809 0.457 B_Activated L2
ENSG00000164442 CITED2 36459 sc-eQTL 3.84e-01 -0.0887 0.102 0.457 B_Activated L2
ENSG00000226571 AL592429.2 139745 sc-eQTL 4.05e-01 -0.0849 0.102 0.457 B_Activated L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 1.58e-01 0.125 0.0883 0.459 B_Intermediate L2
ENSG00000112406 HECA 276027 sc-eQTL 1.24e-01 0.118 0.0764 0.459 B_Intermediate L2
ENSG00000135597 REPS1 422846 sc-eQTL 3.20e-01 0.0825 0.0827 0.459 B_Intermediate L2
ENSG00000146386 ABRACL 382362 sc-eQTL 8.18e-01 0.0163 0.0706 0.459 B_Intermediate L2
ENSG00000164440 TXLNB 119109 sc-eQTL 2.93e-01 0.091 0.0862 0.459 B_Intermediate L2
ENSG00000164442 CITED2 36459 sc-eQTL 2.58e-01 -0.09 0.0793 0.459 B_Intermediate L2
ENSG00000226571 AL592429.2 139745 sc-eQTL 5.56e-01 0.0508 0.0861 0.459 B_Intermediate L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 4.67e-01 0.0657 0.0902 0.461 B_Memory L2
ENSG00000112406 HECA 276027 sc-eQTL 1.53e-01 0.112 0.0777 0.461 B_Memory L2
ENSG00000135597 REPS1 422846 sc-eQTL 6.88e-01 0.034 0.0846 0.461 B_Memory L2
ENSG00000146386 ABRACL 382362 sc-eQTL 2.05e-01 -0.0847 0.0667 0.461 B_Memory L2
ENSG00000164440 TXLNB 119109 sc-eQTL 7.25e-01 -0.0301 0.0854 0.461 B_Memory L2
ENSG00000164442 CITED2 36459 sc-eQTL 1.65e-01 -0.109 0.0781 0.461 B_Memory L2
ENSG00000226571 AL592429.2 139745 sc-eQTL 9.16e-01 -0.0101 0.0963 0.461 B_Memory L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 8.96e-01 -0.0112 0.085 0.459 B_Naive1 L2
ENSG00000112406 HECA 276027 sc-eQTL 2.49e-01 0.0855 0.0739 0.459 B_Naive1 L2
ENSG00000135597 REPS1 422846 sc-eQTL 3.87e-01 0.0593 0.0685 0.459 B_Naive1 L2
ENSG00000146386 ABRACL 382362 sc-eQTL 6.31e-01 -0.023 0.048 0.459 B_Naive1 L2
ENSG00000164440 TXLNB 119109 sc-eQTL 9.86e-01 -0.00163 0.0898 0.459 B_Naive1 L2
ENSG00000164442 CITED2 36459 sc-eQTL 9.88e-01 0.000985 0.0654 0.459 B_Naive1 L2
ENSG00000226571 AL592429.2 139745 sc-eQTL 1.10e-01 -0.137 0.0852 0.459 B_Naive1 L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 1.49e-03 0.268 0.0832 0.459 B_Naive2 L2
ENSG00000112406 HECA 276027 sc-eQTL 7.59e-01 0.0246 0.0802 0.459 B_Naive2 L2
ENSG00000135597 REPS1 422846 sc-eQTL 9.43e-01 -0.00551 0.0765 0.459 B_Naive2 L2
ENSG00000146386 ABRACL 382362 sc-eQTL 7.18e-01 -0.0204 0.0563 0.459 B_Naive2 L2
ENSG00000164440 TXLNB 119109 sc-eQTL 5.73e-01 -0.0504 0.0891 0.459 B_Naive2 L2
ENSG00000164442 CITED2 36459 sc-eQTL 6.55e-01 -0.0407 0.091 0.459 B_Naive2 L2
ENSG00000226571 AL592429.2 139745 sc-eQTL 6.45e-01 -0.0386 0.0835 0.459 B_Naive2 L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 6.46e-01 0.0403 0.0877 0.461 CD4_CTL L2
ENSG00000112406 HECA 276027 sc-eQTL 4.26e-02 0.179 0.0876 0.461 CD4_CTL L2
ENSG00000135597 REPS1 422846 sc-eQTL 3.73e-01 -0.0766 0.0858 0.461 CD4_CTL L2
ENSG00000146386 ABRACL 382362 sc-eQTL 7.65e-01 -0.0234 0.0783 0.461 CD4_CTL L2
ENSG00000164442 CITED2 36459 sc-eQTL 2.83e-01 0.0844 0.0785 0.461 CD4_CTL L2
ENSG00000231329 AL031772.1 171454 sc-eQTL 3.61e-01 0.0743 0.081 0.461 CD4_CTL L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 2.19e-01 0.103 0.0835 0.459 CD4_Naive L2
ENSG00000112406 HECA 276027 sc-eQTL 4.10e-02 0.133 0.0645 0.459 CD4_Naive L2
ENSG00000135597 REPS1 422846 sc-eQTL 6.18e-01 0.0288 0.0577 0.459 CD4_Naive L2
ENSG00000146386 ABRACL 382362 sc-eQTL 3.90e-01 0.0335 0.0388 0.459 CD4_Naive L2
ENSG00000164442 CITED2 36459 sc-eQTL 6.74e-01 0.0278 0.066 0.459 CD4_Naive L2
ENSG00000231329 AL031772.1 171454 sc-eQTL 8.95e-02 0.113 0.0663 0.459 CD4_Naive L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 4.95e-01 0.0557 0.0815 0.459 CD4_TCM L2
ENSG00000112406 HECA 276027 sc-eQTL 3.38e-02 0.138 0.0645 0.459 CD4_TCM L2
ENSG00000135597 REPS1 422846 sc-eQTL 8.49e-01 -0.0118 0.0618 0.459 CD4_TCM L2
ENSG00000146386 ABRACL 382362 sc-eQTL 1.74e-01 -0.0646 0.0474 0.459 CD4_TCM L2
ENSG00000164442 CITED2 36459 sc-eQTL 6.74e-01 -0.0298 0.0707 0.459 CD4_TCM L2
ENSG00000231329 AL031772.1 171454 sc-eQTL 5.13e-01 -0.05 0.0764 0.459 CD4_TCM L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 3.14e-01 -0.0927 0.0918 0.459 CD4_TEM L2
ENSG00000112406 HECA 276027 sc-eQTL 3.54e-01 0.0664 0.0715 0.459 CD4_TEM L2
ENSG00000135597 REPS1 422846 sc-eQTL 4.91e-01 -0.0537 0.0779 0.459 CD4_TEM L2
ENSG00000146386 ABRACL 382362 sc-eQTL 9.17e-01 -0.00584 0.0556 0.459 CD4_TEM L2
ENSG00000164442 CITED2 36459 sc-eQTL 5.20e-01 0.0471 0.073 0.459 CD4_TEM L2
ENSG00000231329 AL031772.1 171454 sc-eQTL 1.78e-01 0.103 0.0761 0.459 CD4_TEM L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 1.18e-01 0.147 0.0937 0.459 CD8_CTL L2
ENSG00000112406 HECA 276027 sc-eQTL 1.21e-02 0.171 0.0676 0.459 CD8_CTL L2
ENSG00000135597 REPS1 422846 sc-eQTL 8.85e-01 -0.0106 0.0735 0.459 CD8_CTL L2
ENSG00000146386 ABRACL 382362 sc-eQTL 2.61e-01 -0.0668 0.0593 0.459 CD8_CTL L2
ENSG00000164442 CITED2 36459 sc-eQTL 8.31e-01 0.0148 0.0692 0.459 CD8_CTL L2
ENSG00000231329 AL031772.1 171454 sc-eQTL 3.23e-01 0.082 0.0828 0.459 CD8_CTL L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 2.02e-01 -0.115 0.0896 0.459 CD8_Naive L2
ENSG00000112406 HECA 276027 sc-eQTL 9.62e-02 0.115 0.069 0.459 CD8_Naive L2
ENSG00000135597 REPS1 422846 sc-eQTL 5.19e-01 0.0449 0.0695 0.459 CD8_Naive L2
ENSG00000146386 ABRACL 382362 sc-eQTL 2.83e-01 0.0392 0.0364 0.459 CD8_Naive L2
ENSG00000164442 CITED2 36459 sc-eQTL 2.03e-01 0.0939 0.0735 0.459 CD8_Naive L2
ENSG00000231329 AL031772.1 171454 sc-eQTL 1.66e-01 0.117 0.0841 0.459 CD8_Naive L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 4.67e-01 0.0718 0.0986 0.47 CD8_TCM L2
ENSG00000112406 HECA 276027 sc-eQTL 4.72e-01 0.052 0.0721 0.47 CD8_TCM L2
ENSG00000135597 REPS1 422846 sc-eQTL 1.12e-01 -0.119 0.0745 0.47 CD8_TCM L2
ENSG00000146386 ABRACL 382362 sc-eQTL 6.45e-02 -0.138 0.0741 0.47 CD8_TCM L2
ENSG00000164442 CITED2 36459 sc-eQTL 3.40e-01 -0.0734 0.0767 0.47 CD8_TCM L2
ENSG00000231329 AL031772.1 171454 sc-eQTL 7.31e-01 0.0279 0.0811 0.47 CD8_TCM L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 5.20e-01 0.0607 0.0943 0.461 CD8_TEM L2
ENSG00000112406 HECA 276027 sc-eQTL 5.59e-01 -0.0517 0.0883 0.461 CD8_TEM L2
ENSG00000135597 REPS1 422846 sc-eQTL 5.55e-01 0.0544 0.0919 0.461 CD8_TEM L2
ENSG00000146386 ABRACL 382362 sc-eQTL 8.22e-01 -0.0159 0.0709 0.461 CD8_TEM L2
ENSG00000164442 CITED2 36459 sc-eQTL 8.90e-01 -0.0106 0.077 0.461 CD8_TEM L2
ENSG00000231329 AL031772.1 171454 sc-eQTL 5.80e-01 -0.0485 0.0875 0.461 CD8_TEM L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 6.45e-01 0.0463 0.1 0.457 MAIT L2
ENSG00000112406 HECA 276027 sc-eQTL 1.23e-01 0.118 0.076 0.457 MAIT L2
ENSG00000135597 REPS1 422846 sc-eQTL 1.58e-02 -0.197 0.0811 0.457 MAIT L2
ENSG00000146386 ABRACL 382362 sc-eQTL 2.48e-01 0.0699 0.0603 0.457 MAIT L2
ENSG00000164442 CITED2 36459 sc-eQTL 8.20e-01 0.0162 0.0712 0.457 MAIT L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 9.69e-01 -0.00364 0.0922 0.458 NK_CD56bright L2
ENSG00000112406 HECA 276027 sc-eQTL 1.60e-01 0.117 0.0832 0.458 NK_CD56bright L2
ENSG00000135597 REPS1 422846 sc-eQTL 5.37e-01 0.0481 0.0779 0.458 NK_CD56bright L2
ENSG00000146386 ABRACL 382362 sc-eQTL 3.21e-02 -0.153 0.071 0.458 NK_CD56bright L2
ENSG00000164442 CITED2 36459 sc-eQTL 7.26e-01 -0.027 0.077 0.458 NK_CD56bright L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 5.79e-01 0.0478 0.0859 0.459 NK_CD56dim L2
ENSG00000112406 HECA 276027 sc-eQTL 3.50e-01 0.0692 0.0738 0.459 NK_CD56dim L2
ENSG00000135597 REPS1 422846 sc-eQTL 7.77e-01 0.0199 0.0701 0.459 NK_CD56dim L2
ENSG00000146386 ABRACL 382362 sc-eQTL 9.04e-01 0.00574 0.0475 0.459 NK_CD56dim L2
ENSG00000164442 CITED2 36459 sc-eQTL 3.73e-01 0.0564 0.0632 0.459 NK_CD56dim L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 5.72e-02 0.191 0.1 0.452 NK_HLA L2
ENSG00000112406 HECA 276027 sc-eQTL 2.31e-01 0.113 0.0941 0.452 NK_HLA L2
ENSG00000135597 REPS1 422846 sc-eQTL 2.69e-01 -0.103 0.0929 0.452 NK_HLA L2
ENSG00000146386 ABRACL 382362 sc-eQTL 9.17e-01 -0.00803 0.0766 0.452 NK_HLA L2
ENSG00000164442 CITED2 36459 sc-eQTL 6.57e-01 -0.0364 0.0818 0.452 NK_HLA L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 9.14e-02 0.149 0.0881 0.459 NK_cytokine L2
ENSG00000112406 HECA 276027 sc-eQTL 4.24e-01 0.0611 0.0763 0.459 NK_cytokine L2
ENSG00000135597 REPS1 422846 sc-eQTL 4.04e-02 -0.161 0.0781 0.459 NK_cytokine L2
ENSG00000146386 ABRACL 382362 sc-eQTL 2.86e-01 -0.0542 0.0507 0.459 NK_cytokine L2
ENSG00000164442 CITED2 36459 sc-eQTL 8.37e-01 -0.0137 0.0663 0.459 NK_cytokine L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 6.37e-01 -0.0512 0.108 0.441 PB L2
ENSG00000112406 HECA 276027 sc-eQTL 5.04e-02 0.229 0.116 0.441 PB L2
ENSG00000135597 REPS1 422846 sc-eQTL 5.47e-01 -0.0632 0.105 0.441 PB L2
ENSG00000146386 ABRACL 382362 sc-eQTL 6.95e-01 -0.0288 0.0733 0.441 PB L2
ENSG00000164440 TXLNB 119109 sc-eQTL 2.58e-01 -0.121 0.107 0.441 PB L2
ENSG00000164442 CITED2 36459 sc-eQTL 1.26e-01 0.123 0.0798 0.441 PB L2
ENSG00000226571 AL592429.2 139745 sc-eQTL 7.60e-01 -0.0331 0.108 0.441 PB L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 7.20e-01 0.0343 0.0957 0.461 Pro_T L2
ENSG00000112406 HECA 276027 sc-eQTL 8.18e-01 -0.0174 0.0754 0.461 Pro_T L2
ENSG00000135597 REPS1 422846 sc-eQTL 9.38e-01 -0.00694 0.0888 0.461 Pro_T L2
ENSG00000146386 ABRACL 382362 sc-eQTL 8.69e-01 0.00949 0.0573 0.461 Pro_T L2
ENSG00000164442 CITED2 36459 sc-eQTL 9.78e-02 0.113 0.0678 0.461 Pro_T L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 3.05e-02 -0.19 0.0874 0.459 Treg L2
ENSG00000112406 HECA 276027 sc-eQTL 7.02e-02 0.133 0.0729 0.459 Treg L2
ENSG00000135597 REPS1 422846 sc-eQTL 7.55e-01 -0.0238 0.076 0.459 Treg L2
ENSG00000146386 ABRACL 382362 sc-eQTL 9.37e-01 -0.00516 0.0647 0.459 Treg L2
ENSG00000164442 CITED2 36459 sc-eQTL 2.01e-01 0.0923 0.072 0.459 Treg L2
ENSG00000231329 AL031772.1 171454 sc-eQTL 6.10e-01 0.0422 0.0826 0.459 Treg L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 3.88e-01 -0.077 0.089 0.463 cDC L2
ENSG00000112406 HECA 276027 sc-eQTL 9.70e-01 -0.00322 0.0848 0.463 cDC L2
ENSG00000135540 NHSL1 718536 sc-eQTL 3.10e-01 0.0843 0.0828 0.463 cDC L2
ENSG00000135597 REPS1 422846 sc-eQTL 3.45e-01 0.0904 0.0955 0.463 cDC L2
ENSG00000146386 ABRACL 382362 sc-eQTL 7.92e-02 -0.137 0.0776 0.463 cDC L2
ENSG00000164442 CITED2 36459 sc-eQTL 3.70e-01 -0.0744 0.0828 0.463 cDC L2
ENSG00000225177 AL590617.2 718559 sc-eQTL 8.97e-01 -0.0119 0.0916 0.463 cDC L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 7.47e-01 -0.0221 0.0685 0.459 cMono_IL1B L2
ENSG00000112406 HECA 276027 sc-eQTL 3.91e-01 0.0485 0.0565 0.459 cMono_IL1B L2
ENSG00000135540 NHSL1 718536 sc-eQTL 2.40e-01 0.0967 0.0821 0.459 cMono_IL1B L2
ENSG00000135597 REPS1 422846 sc-eQTL 9.30e-01 0.00643 0.0736 0.459 cMono_IL1B L2
ENSG00000146386 ABRACL 382362 sc-eQTL 1.13e-01 -0.098 0.0615 0.459 cMono_IL1B L2
ENSG00000164442 CITED2 36459 sc-eQTL 4.32e-01 0.0509 0.0646 0.459 cMono_IL1B L2
ENSG00000225177 AL590617.2 718559 sc-eQTL 6.59e-01 -0.0381 0.0862 0.459 cMono_IL1B L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 4.69e-01 -0.0571 0.0787 0.459 cMono_S100A L2
ENSG00000112406 HECA 276027 sc-eQTL 9.28e-02 0.112 0.0662 0.459 cMono_S100A L2
ENSG00000135540 NHSL1 718536 sc-eQTL 2.05e-01 -0.107 0.0841 0.459 cMono_S100A L2
ENSG00000135597 REPS1 422846 sc-eQTL 6.21e-01 0.0395 0.0799 0.459 cMono_S100A L2
ENSG00000146386 ABRACL 382362 sc-eQTL 4.22e-01 -0.0558 0.0694 0.459 cMono_S100A L2
ENSG00000164442 CITED2 36459 sc-eQTL 6.93e-01 0.0272 0.0687 0.459 cMono_S100A L2
ENSG00000225177 AL590617.2 718559 sc-eQTL 9.15e-01 -0.00986 0.0925 0.459 cMono_S100A L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 2.07e-01 0.135 0.107 0.461 gdT L2
ENSG00000112406 HECA 276027 sc-eQTL 3.73e-01 0.0907 0.102 0.461 gdT L2
ENSG00000135597 REPS1 422846 sc-eQTL 7.46e-01 -0.0342 0.105 0.461 gdT L2
ENSG00000146386 ABRACL 382362 sc-eQTL 7.98e-01 -0.0203 0.0793 0.461 gdT L2
ENSG00000164442 CITED2 36459 sc-eQTL 7.22e-01 0.0325 0.0914 0.461 gdT L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 5.49e-01 -0.0549 0.0915 0.458 intMono L2
ENSG00000112406 HECA 276027 sc-eQTL 9.40e-01 0.00567 0.0752 0.458 intMono L2
ENSG00000135540 NHSL1 718536 sc-eQTL 2.80e-01 -0.0896 0.0827 0.458 intMono L2
ENSG00000135597 REPS1 422846 sc-eQTL 6.18e-01 0.0427 0.0856 0.458 intMono L2
ENSG00000146386 ABRACL 382362 sc-eQTL 4.16e-01 -0.0636 0.0781 0.458 intMono L2
ENSG00000164442 CITED2 36459 sc-eQTL 1.01e-01 0.124 0.0754 0.458 intMono L2
ENSG00000225177 AL590617.2 718559 sc-eQTL 6.90e-02 -0.169 0.0923 0.458 intMono L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 5.39e-01 -0.0533 0.0866 0.459 ncMono L2
ENSG00000112406 HECA 276027 sc-eQTL 6.50e-01 0.0359 0.0792 0.459 ncMono L2
ENSG00000135540 NHSL1 718536 sc-eQTL 8.58e-01 0.0149 0.0833 0.459 ncMono L2
ENSG00000135597 REPS1 422846 sc-eQTL 5.00e-01 0.0424 0.0627 0.459 ncMono L2
ENSG00000146386 ABRACL 382362 sc-eQTL 9.97e-01 0.000253 0.0756 0.459 ncMono L2
ENSG00000164442 CITED2 36459 sc-eQTL 7.40e-01 0.0213 0.0641 0.459 ncMono L2
ENSG00000225177 AL590617.2 718559 sc-eQTL 7.95e-01 0.024 0.0925 0.459 ncMono L2
ENSG00000024862 CCDC28A 637598 sc-eQTL 1.78e-01 -0.138 0.102 0.466 pDC L2
ENSG00000112406 HECA 276027 sc-eQTL 8.27e-01 -0.019 0.0869 0.466 pDC L2
ENSG00000135540 NHSL1 718536 sc-eQTL 4.06e-02 -0.162 0.0784 0.466 pDC L2
ENSG00000135597 REPS1 422846 sc-eQTL 1.94e-01 0.104 0.08 0.466 pDC L2
ENSG00000146386 ABRACL 382362 sc-eQTL 1.00e-01 -0.144 0.0872 0.466 pDC L2
ENSG00000164442 CITED2 36459 sc-eQTL 7.03e-01 0.0395 0.103 0.466 pDC L2
ENSG00000225177 AL590617.2 718559 sc-eQTL 4.94e-01 -0.0546 0.0797 0.466 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 637598 sc-eQTL 4.99e-01 0.0572 0.0845 0.459 B_Memory LOneK1K
ENSG00000112406 HECA 276027 sc-eQTL 1.20e-02 0.188 0.0742 0.459 B_Memory LOneK1K
ENSG00000135597 REPS1 422846 sc-eQTL 3.97e-01 0.0661 0.0779 0.459 B_Memory LOneK1K
ENSG00000146386 ABRACL 382362 sc-eQTL 5.89e-01 -0.0293 0.054 0.459 B_Memory LOneK1K
ENSG00000164440 TXLNB 119109 sc-eQTL 2.79e-01 0.097 0.0893 0.459 B_Memory LOneK1K
ENSG00000164442 CITED2 36459 sc-eQTL 2.21e-01 -0.0928 0.0757 0.459 B_Memory LOneK1K
ENSG00000226571 AL592429.2 139745 sc-eQTL 8.31e-01 0.0189 0.0883 0.459 B_Memory LOneK1K
ENSG00000024862 CCDC28A 637598 sc-eQTL 1.30e-01 0.12 0.0791 0.459 B_Naive LOneK1K
ENSG00000112406 HECA 276027 sc-eQTL 2.79e-01 0.0806 0.0742 0.459 B_Naive LOneK1K
ENSG00000135597 REPS1 422846 sc-eQTL 5.30e-01 0.0399 0.0634 0.459 B_Naive LOneK1K
ENSG00000146386 ABRACL 382362 sc-eQTL 8.19e-01 0.0102 0.0445 0.459 B_Naive LOneK1K
ENSG00000164440 TXLNB 119109 sc-eQTL 7.23e-01 0.0331 0.0931 0.459 B_Naive LOneK1K
ENSG00000164442 CITED2 36459 sc-eQTL 7.99e-01 -0.0173 0.0677 0.459 B_Naive LOneK1K
ENSG00000226571 AL592429.2 139745 sc-eQTL 2.04e-01 -0.101 0.0792 0.459 B_Naive LOneK1K
ENSG00000024862 CCDC28A 637598 sc-eQTL 4.64e-01 -0.0464 0.0633 0.459 CD14_Mono LOneK1K
ENSG00000112406 HECA 276027 sc-eQTL 2.09e-01 0.0714 0.0566 0.459 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 718536 sc-eQTL 6.66e-01 0.0359 0.083 0.459 CD14_Mono LOneK1K
ENSG00000135597 REPS1 422846 sc-eQTL 7.63e-01 0.0206 0.0683 0.459 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 382362 sc-eQTL 1.61e-01 -0.0852 0.0605 0.459 CD14_Mono LOneK1K
ENSG00000164442 CITED2 36459 sc-eQTL 4.70e-01 0.0481 0.0665 0.459 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 718559 sc-eQTL 5.78e-01 -0.0496 0.0891 0.459 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 637598 sc-eQTL 4.04e-01 -0.0715 0.0856 0.461 CD16_Mono LOneK1K
ENSG00000112406 HECA 276027 sc-eQTL 8.57e-01 0.0132 0.0732 0.461 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 718536 sc-eQTL 9.82e-01 0.00182 0.0814 0.461 CD16_Mono LOneK1K
ENSG00000135597 REPS1 422846 sc-eQTL 6.42e-01 0.0236 0.0506 0.461 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 382362 sc-eQTL 4.07e-01 -0.0615 0.074 0.461 CD16_Mono LOneK1K
ENSG00000164442 CITED2 36459 sc-eQTL 3.91e-01 0.0549 0.0638 0.461 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 718559 sc-eQTL 2.35e-01 -0.107 0.0897 0.461 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 637598 sc-eQTL 1.05e-01 0.134 0.082 0.459 NK_CD56dim LOneK1K
ENSG00000112406 HECA 276027 sc-eQTL 1.51e-01 0.101 0.07 0.459 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 422846 sc-eQTL 4.82e-01 -0.0484 0.0687 0.459 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 382362 sc-eQTL 7.20e-01 -0.0159 0.0443 0.459 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 36459 sc-eQTL 6.98e-01 0.0249 0.0641 0.459 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000226571 AL592429.2 139745 eQTL 2.81e-03 0.106 0.0354 0.00389 0.00124 0.456

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000164442 \N 36459 1.04e-05 1.18e-05 1.26e-06 6.2e-06 2.4e-06 5.08e-06 1.16e-05 1.75e-06 9.7e-06 5.38e-06 1.33e-05 5.8e-06 1.71e-05 3.96e-06 2.6e-06 6.51e-06 4.9e-06 7.74e-06 2.6e-06 2.78e-06 5.07e-06 9.86e-06 8.9e-06 3.36e-06 1.95e-05 3.49e-06 5.24e-06 3.81e-06 1.1e-05 9.8e-06 6.13e-06 9.55e-07 1.12e-06 3.35e-06 4.77e-06 2.3e-06 1.73e-06 1.94e-06 1.89e-06 9.75e-07 9.82e-07 1.35e-05 1.38e-06 1.52e-07 7.56e-07 1.64e-06 1.6e-06 7.44e-07 5.6e-07