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Genes within 1Mb (chr6:139409798:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 636289 sc-eQTL 4.32e-01 0.0561 0.0713 0.459 B L1
ENSG00000112406 HECA 274718 sc-eQTL 4.75e-02 0.137 0.0688 0.459 B L1
ENSG00000135597 REPS1 421537 sc-eQTL 1.34e-01 0.0917 0.061 0.459 B L1
ENSG00000146386 ABRACL 381053 sc-eQTL 6.50e-01 -0.0164 0.036 0.459 B L1
ENSG00000164440 TXLNB 117800 sc-eQTL 6.60e-01 0.0389 0.0883 0.459 B L1
ENSG00000164442 CITED2 35150 sc-eQTL 5.71e-01 0.0315 0.0556 0.459 B L1
ENSG00000226571 AL592429.2 138436 sc-eQTL 5.33e-01 -0.0386 0.0618 0.459 B L1
ENSG00000024862 CCDC28A 636289 sc-eQTL 5.38e-01 0.0489 0.0792 0.459 CD4T L1
ENSG00000112406 HECA 274718 sc-eQTL 1.70e-02 0.157 0.0652 0.459 CD4T L1
ENSG00000135597 REPS1 421537 sc-eQTL 6.07e-01 0.0267 0.0519 0.459 CD4T L1
ENSG00000146386 ABRACL 381053 sc-eQTL 4.27e-01 0.0303 0.0381 0.459 CD4T L1
ENSG00000164442 CITED2 35150 sc-eQTL 5.86e-01 0.0355 0.065 0.459 CD4T L1
ENSG00000231329 AL031772.1 170145 sc-eQTL 1.24e-01 0.0984 0.0638 0.459 CD4T L1
ENSG00000024862 CCDC28A 636289 sc-eQTL 6.18e-01 0.0429 0.0859 0.459 CD8T L1
ENSG00000112406 HECA 274718 sc-eQTL 3.76e-02 0.127 0.0609 0.459 CD8T L1
ENSG00000135597 REPS1 421537 sc-eQTL 5.94e-01 -0.0309 0.0578 0.459 CD8T L1
ENSG00000146386 ABRACL 381053 sc-eQTL 5.33e-01 -0.0206 0.0329 0.459 CD8T L1
ENSG00000164442 CITED2 35150 sc-eQTL 4.26e-01 0.0498 0.0624 0.459 CD8T L1
ENSG00000231329 AL031772.1 170145 sc-eQTL 6.56e-01 0.0339 0.0759 0.459 CD8T L1
ENSG00000024862 CCDC28A 636289 sc-eQTL 5.04e-01 -0.0585 0.0875 0.457 DC L1
ENSG00000112406 HECA 274718 sc-eQTL 2.95e-01 0.0755 0.0719 0.457 DC L1
ENSG00000135540 NHSL1 717227 sc-eQTL 9.38e-01 -0.00621 0.0803 0.457 DC L1
ENSG00000135597 REPS1 421537 sc-eQTL 7.15e-01 0.026 0.071 0.457 DC L1
ENSG00000146386 ABRACL 381053 sc-eQTL 3.09e-01 -0.0707 0.0694 0.457 DC L1
ENSG00000164442 CITED2 35150 sc-eQTL 7.86e-01 -0.0225 0.0825 0.457 DC L1
ENSG00000225177 AL590617.2 717250 sc-eQTL 5.38e-01 -0.0517 0.0838 0.457 DC L1
ENSG00000024862 CCDC28A 636289 sc-eQTL 3.64e-01 -0.057 0.0626 0.459 Mono L1
ENSG00000112406 HECA 274718 sc-eQTL 2.47e-01 0.0663 0.0571 0.459 Mono L1
ENSG00000135540 NHSL1 717227 sc-eQTL 7.51e-01 0.0261 0.082 0.459 Mono L1
ENSG00000135597 REPS1 421537 sc-eQTL 9.70e-01 0.00179 0.048 0.459 Mono L1
ENSG00000146386 ABRACL 381053 sc-eQTL 2.03e-01 -0.0795 0.0623 0.459 Mono L1
ENSG00000164442 CITED2 35150 sc-eQTL 4.81e-01 0.0466 0.066 0.459 Mono L1
ENSG00000225177 AL590617.2 717250 sc-eQTL 4.22e-01 -0.0685 0.0852 0.459 Mono L1
ENSG00000024862 CCDC28A 636289 sc-eQTL 7.47e-02 0.14 0.0784 0.461 NK L1
ENSG00000112406 HECA 274718 sc-eQTL 1.06e-01 0.11 0.0678 0.461 NK L1
ENSG00000135597 REPS1 421537 sc-eQTL 7.27e-01 -0.0228 0.065 0.461 NK L1
ENSG00000146386 ABRACL 381053 sc-eQTL 9.22e-01 -0.00463 0.0474 0.461 NK L1
ENSG00000164442 CITED2 35150 sc-eQTL 8.40e-01 0.0127 0.0631 0.461 NK L1
ENSG00000024862 CCDC28A 636289 sc-eQTL 3.90e-01 0.0802 0.0932 0.459 Other_T L1
ENSG00000112406 HECA 274718 sc-eQTL 1.14e-01 0.107 0.0672 0.459 Other_T L1
ENSG00000135597 REPS1 421537 sc-eQTL 2.80e-01 -0.0784 0.0725 0.459 Other_T L1
ENSG00000146386 ABRACL 381053 sc-eQTL 5.64e-01 0.0274 0.0475 0.459 Other_T L1
ENSG00000164442 CITED2 35150 sc-eQTL 9.23e-01 0.00538 0.0557 0.459 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 636289 sc-eQTL 1.28e-01 -0.159 0.104 0.457 B_Activated L2
ENSG00000112406 HECA 274718 sc-eQTL 3.42e-02 0.21 0.0986 0.457 B_Activated L2
ENSG00000135597 REPS1 421537 sc-eQTL 6.02e-01 -0.0546 0.104 0.457 B_Activated L2
ENSG00000146386 ABRACL 381053 sc-eQTL 5.46e-02 -0.181 0.0936 0.457 B_Activated L2
ENSG00000164440 TXLNB 117800 sc-eQTL 4.21e-01 0.0652 0.0809 0.457 B_Activated L2
ENSG00000164442 CITED2 35150 sc-eQTL 3.84e-01 -0.0887 0.102 0.457 B_Activated L2
ENSG00000226571 AL592429.2 138436 sc-eQTL 4.05e-01 -0.0849 0.102 0.457 B_Activated L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 1.58e-01 0.125 0.0883 0.459 B_Intermediate L2
ENSG00000112406 HECA 274718 sc-eQTL 1.24e-01 0.118 0.0764 0.459 B_Intermediate L2
ENSG00000135597 REPS1 421537 sc-eQTL 3.20e-01 0.0825 0.0827 0.459 B_Intermediate L2
ENSG00000146386 ABRACL 381053 sc-eQTL 8.18e-01 0.0163 0.0706 0.459 B_Intermediate L2
ENSG00000164440 TXLNB 117800 sc-eQTL 2.93e-01 0.091 0.0862 0.459 B_Intermediate L2
ENSG00000164442 CITED2 35150 sc-eQTL 2.58e-01 -0.09 0.0793 0.459 B_Intermediate L2
ENSG00000226571 AL592429.2 138436 sc-eQTL 5.56e-01 0.0508 0.0861 0.459 B_Intermediate L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 4.67e-01 0.0657 0.0902 0.461 B_Memory L2
ENSG00000112406 HECA 274718 sc-eQTL 1.53e-01 0.112 0.0777 0.461 B_Memory L2
ENSG00000135597 REPS1 421537 sc-eQTL 6.88e-01 0.034 0.0846 0.461 B_Memory L2
ENSG00000146386 ABRACL 381053 sc-eQTL 2.05e-01 -0.0847 0.0667 0.461 B_Memory L2
ENSG00000164440 TXLNB 117800 sc-eQTL 7.25e-01 -0.0301 0.0854 0.461 B_Memory L2
ENSG00000164442 CITED2 35150 sc-eQTL 1.65e-01 -0.109 0.0781 0.461 B_Memory L2
ENSG00000226571 AL592429.2 138436 sc-eQTL 9.16e-01 -0.0101 0.0963 0.461 B_Memory L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 8.96e-01 -0.0112 0.085 0.459 B_Naive1 L2
ENSG00000112406 HECA 274718 sc-eQTL 2.49e-01 0.0855 0.0739 0.459 B_Naive1 L2
ENSG00000135597 REPS1 421537 sc-eQTL 3.87e-01 0.0593 0.0685 0.459 B_Naive1 L2
ENSG00000146386 ABRACL 381053 sc-eQTL 6.31e-01 -0.023 0.048 0.459 B_Naive1 L2
ENSG00000164440 TXLNB 117800 sc-eQTL 9.86e-01 -0.00163 0.0898 0.459 B_Naive1 L2
ENSG00000164442 CITED2 35150 sc-eQTL 9.88e-01 0.000985 0.0654 0.459 B_Naive1 L2
ENSG00000226571 AL592429.2 138436 sc-eQTL 1.10e-01 -0.137 0.0852 0.459 B_Naive1 L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 1.49e-03 0.268 0.0832 0.459 B_Naive2 L2
ENSG00000112406 HECA 274718 sc-eQTL 7.59e-01 0.0246 0.0802 0.459 B_Naive2 L2
ENSG00000135597 REPS1 421537 sc-eQTL 9.43e-01 -0.00551 0.0765 0.459 B_Naive2 L2
ENSG00000146386 ABRACL 381053 sc-eQTL 7.18e-01 -0.0204 0.0563 0.459 B_Naive2 L2
ENSG00000164440 TXLNB 117800 sc-eQTL 5.73e-01 -0.0504 0.0891 0.459 B_Naive2 L2
ENSG00000164442 CITED2 35150 sc-eQTL 6.55e-01 -0.0407 0.091 0.459 B_Naive2 L2
ENSG00000226571 AL592429.2 138436 sc-eQTL 6.45e-01 -0.0386 0.0835 0.459 B_Naive2 L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 6.46e-01 0.0403 0.0877 0.461 CD4_CTL L2
ENSG00000112406 HECA 274718 sc-eQTL 4.26e-02 0.179 0.0876 0.461 CD4_CTL L2
ENSG00000135597 REPS1 421537 sc-eQTL 3.73e-01 -0.0766 0.0858 0.461 CD4_CTL L2
ENSG00000146386 ABRACL 381053 sc-eQTL 7.65e-01 -0.0234 0.0783 0.461 CD4_CTL L2
ENSG00000164442 CITED2 35150 sc-eQTL 2.83e-01 0.0844 0.0785 0.461 CD4_CTL L2
ENSG00000231329 AL031772.1 170145 sc-eQTL 3.61e-01 0.0743 0.081 0.461 CD4_CTL L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 2.19e-01 0.103 0.0835 0.459 CD4_Naive L2
ENSG00000112406 HECA 274718 sc-eQTL 4.10e-02 0.133 0.0645 0.459 CD4_Naive L2
ENSG00000135597 REPS1 421537 sc-eQTL 6.18e-01 0.0288 0.0577 0.459 CD4_Naive L2
ENSG00000146386 ABRACL 381053 sc-eQTL 3.90e-01 0.0335 0.0388 0.459 CD4_Naive L2
ENSG00000164442 CITED2 35150 sc-eQTL 6.74e-01 0.0278 0.066 0.459 CD4_Naive L2
ENSG00000231329 AL031772.1 170145 sc-eQTL 8.95e-02 0.113 0.0663 0.459 CD4_Naive L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 4.95e-01 0.0557 0.0815 0.459 CD4_TCM L2
ENSG00000112406 HECA 274718 sc-eQTL 3.38e-02 0.138 0.0645 0.459 CD4_TCM L2
ENSG00000135597 REPS1 421537 sc-eQTL 8.49e-01 -0.0118 0.0618 0.459 CD4_TCM L2
ENSG00000146386 ABRACL 381053 sc-eQTL 1.74e-01 -0.0646 0.0474 0.459 CD4_TCM L2
ENSG00000164442 CITED2 35150 sc-eQTL 6.74e-01 -0.0298 0.0707 0.459 CD4_TCM L2
ENSG00000231329 AL031772.1 170145 sc-eQTL 5.13e-01 -0.05 0.0764 0.459 CD4_TCM L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 3.14e-01 -0.0927 0.0918 0.459 CD4_TEM L2
ENSG00000112406 HECA 274718 sc-eQTL 3.54e-01 0.0664 0.0715 0.459 CD4_TEM L2
ENSG00000135597 REPS1 421537 sc-eQTL 4.91e-01 -0.0537 0.0779 0.459 CD4_TEM L2
ENSG00000146386 ABRACL 381053 sc-eQTL 9.17e-01 -0.00584 0.0556 0.459 CD4_TEM L2
ENSG00000164442 CITED2 35150 sc-eQTL 5.20e-01 0.0471 0.073 0.459 CD4_TEM L2
ENSG00000231329 AL031772.1 170145 sc-eQTL 1.78e-01 0.103 0.0761 0.459 CD4_TEM L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 1.18e-01 0.147 0.0937 0.459 CD8_CTL L2
ENSG00000112406 HECA 274718 sc-eQTL 1.21e-02 0.171 0.0676 0.459 CD8_CTL L2
ENSG00000135597 REPS1 421537 sc-eQTL 8.85e-01 -0.0106 0.0735 0.459 CD8_CTL L2
ENSG00000146386 ABRACL 381053 sc-eQTL 2.61e-01 -0.0668 0.0593 0.459 CD8_CTL L2
ENSG00000164442 CITED2 35150 sc-eQTL 8.31e-01 0.0148 0.0692 0.459 CD8_CTL L2
ENSG00000231329 AL031772.1 170145 sc-eQTL 3.23e-01 0.082 0.0828 0.459 CD8_CTL L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 2.02e-01 -0.115 0.0896 0.459 CD8_Naive L2
ENSG00000112406 HECA 274718 sc-eQTL 9.62e-02 0.115 0.069 0.459 CD8_Naive L2
ENSG00000135597 REPS1 421537 sc-eQTL 5.19e-01 0.0449 0.0695 0.459 CD8_Naive L2
ENSG00000146386 ABRACL 381053 sc-eQTL 2.83e-01 0.0392 0.0364 0.459 CD8_Naive L2
ENSG00000164442 CITED2 35150 sc-eQTL 2.03e-01 0.0939 0.0735 0.459 CD8_Naive L2
ENSG00000231329 AL031772.1 170145 sc-eQTL 1.66e-01 0.117 0.0841 0.459 CD8_Naive L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 4.67e-01 0.0718 0.0986 0.47 CD8_TCM L2
ENSG00000112406 HECA 274718 sc-eQTL 4.72e-01 0.052 0.0721 0.47 CD8_TCM L2
ENSG00000135597 REPS1 421537 sc-eQTL 1.12e-01 -0.119 0.0745 0.47 CD8_TCM L2
ENSG00000146386 ABRACL 381053 sc-eQTL 6.45e-02 -0.138 0.0741 0.47 CD8_TCM L2
ENSG00000164442 CITED2 35150 sc-eQTL 3.40e-01 -0.0734 0.0767 0.47 CD8_TCM L2
ENSG00000231329 AL031772.1 170145 sc-eQTL 7.31e-01 0.0279 0.0811 0.47 CD8_TCM L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 5.20e-01 0.0607 0.0943 0.461 CD8_TEM L2
ENSG00000112406 HECA 274718 sc-eQTL 5.59e-01 -0.0517 0.0883 0.461 CD8_TEM L2
ENSG00000135597 REPS1 421537 sc-eQTL 5.55e-01 0.0544 0.0919 0.461 CD8_TEM L2
ENSG00000146386 ABRACL 381053 sc-eQTL 8.22e-01 -0.0159 0.0709 0.461 CD8_TEM L2
ENSG00000164442 CITED2 35150 sc-eQTL 8.90e-01 -0.0106 0.077 0.461 CD8_TEM L2
ENSG00000231329 AL031772.1 170145 sc-eQTL 5.80e-01 -0.0485 0.0875 0.461 CD8_TEM L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 6.45e-01 0.0463 0.1 0.457 MAIT L2
ENSG00000112406 HECA 274718 sc-eQTL 1.23e-01 0.118 0.076 0.457 MAIT L2
ENSG00000135597 REPS1 421537 sc-eQTL 1.58e-02 -0.197 0.0811 0.457 MAIT L2
ENSG00000146386 ABRACL 381053 sc-eQTL 2.48e-01 0.0699 0.0603 0.457 MAIT L2
ENSG00000164442 CITED2 35150 sc-eQTL 8.20e-01 0.0162 0.0712 0.457 MAIT L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 9.69e-01 -0.00364 0.0922 0.458 NK_CD56bright L2
ENSG00000112406 HECA 274718 sc-eQTL 1.60e-01 0.117 0.0832 0.458 NK_CD56bright L2
ENSG00000135597 REPS1 421537 sc-eQTL 5.37e-01 0.0481 0.0779 0.458 NK_CD56bright L2
ENSG00000146386 ABRACL 381053 sc-eQTL 3.21e-02 -0.153 0.071 0.458 NK_CD56bright L2
ENSG00000164442 CITED2 35150 sc-eQTL 7.26e-01 -0.027 0.077 0.458 NK_CD56bright L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 5.79e-01 0.0478 0.0859 0.459 NK_CD56dim L2
ENSG00000112406 HECA 274718 sc-eQTL 3.50e-01 0.0692 0.0738 0.459 NK_CD56dim L2
ENSG00000135597 REPS1 421537 sc-eQTL 7.77e-01 0.0199 0.0701 0.459 NK_CD56dim L2
ENSG00000146386 ABRACL 381053 sc-eQTL 9.04e-01 0.00574 0.0475 0.459 NK_CD56dim L2
ENSG00000164442 CITED2 35150 sc-eQTL 3.73e-01 0.0564 0.0632 0.459 NK_CD56dim L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 5.72e-02 0.191 0.1 0.452 NK_HLA L2
ENSG00000112406 HECA 274718 sc-eQTL 2.31e-01 0.113 0.0941 0.452 NK_HLA L2
ENSG00000135597 REPS1 421537 sc-eQTL 2.69e-01 -0.103 0.0929 0.452 NK_HLA L2
ENSG00000146386 ABRACL 381053 sc-eQTL 9.17e-01 -0.00803 0.0766 0.452 NK_HLA L2
ENSG00000164442 CITED2 35150 sc-eQTL 6.57e-01 -0.0364 0.0818 0.452 NK_HLA L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 9.14e-02 0.149 0.0881 0.459 NK_cytokine L2
ENSG00000112406 HECA 274718 sc-eQTL 4.24e-01 0.0611 0.0763 0.459 NK_cytokine L2
ENSG00000135597 REPS1 421537 sc-eQTL 4.04e-02 -0.161 0.0781 0.459 NK_cytokine L2
ENSG00000146386 ABRACL 381053 sc-eQTL 2.86e-01 -0.0542 0.0507 0.459 NK_cytokine L2
ENSG00000164442 CITED2 35150 sc-eQTL 8.37e-01 -0.0137 0.0663 0.459 NK_cytokine L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 6.37e-01 -0.0512 0.108 0.441 PB L2
ENSG00000112406 HECA 274718 sc-eQTL 5.04e-02 0.229 0.116 0.441 PB L2
ENSG00000135597 REPS1 421537 sc-eQTL 5.47e-01 -0.0632 0.105 0.441 PB L2
ENSG00000146386 ABRACL 381053 sc-eQTL 6.95e-01 -0.0288 0.0733 0.441 PB L2
ENSG00000164440 TXLNB 117800 sc-eQTL 2.58e-01 -0.121 0.107 0.441 PB L2
ENSG00000164442 CITED2 35150 sc-eQTL 1.26e-01 0.123 0.0798 0.441 PB L2
ENSG00000226571 AL592429.2 138436 sc-eQTL 7.60e-01 -0.0331 0.108 0.441 PB L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 7.20e-01 0.0343 0.0957 0.461 Pro_T L2
ENSG00000112406 HECA 274718 sc-eQTL 8.18e-01 -0.0174 0.0754 0.461 Pro_T L2
ENSG00000135597 REPS1 421537 sc-eQTL 9.38e-01 -0.00694 0.0888 0.461 Pro_T L2
ENSG00000146386 ABRACL 381053 sc-eQTL 8.69e-01 0.00949 0.0573 0.461 Pro_T L2
ENSG00000164442 CITED2 35150 sc-eQTL 9.78e-02 0.113 0.0678 0.461 Pro_T L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 3.05e-02 -0.19 0.0874 0.459 Treg L2
ENSG00000112406 HECA 274718 sc-eQTL 7.02e-02 0.133 0.0729 0.459 Treg L2
ENSG00000135597 REPS1 421537 sc-eQTL 7.55e-01 -0.0238 0.076 0.459 Treg L2
ENSG00000146386 ABRACL 381053 sc-eQTL 9.37e-01 -0.00516 0.0647 0.459 Treg L2
ENSG00000164442 CITED2 35150 sc-eQTL 2.01e-01 0.0923 0.072 0.459 Treg L2
ENSG00000231329 AL031772.1 170145 sc-eQTL 6.10e-01 0.0422 0.0826 0.459 Treg L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 3.88e-01 -0.077 0.089 0.463 cDC L2
ENSG00000112406 HECA 274718 sc-eQTL 9.70e-01 -0.00322 0.0848 0.463 cDC L2
ENSG00000135540 NHSL1 717227 sc-eQTL 3.10e-01 0.0843 0.0828 0.463 cDC L2
ENSG00000135597 REPS1 421537 sc-eQTL 3.45e-01 0.0904 0.0955 0.463 cDC L2
ENSG00000146386 ABRACL 381053 sc-eQTL 7.92e-02 -0.137 0.0776 0.463 cDC L2
ENSG00000164442 CITED2 35150 sc-eQTL 3.70e-01 -0.0744 0.0828 0.463 cDC L2
ENSG00000225177 AL590617.2 717250 sc-eQTL 8.97e-01 -0.0119 0.0916 0.463 cDC L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 7.47e-01 -0.0221 0.0685 0.459 cMono_IL1B L2
ENSG00000112406 HECA 274718 sc-eQTL 3.91e-01 0.0485 0.0565 0.459 cMono_IL1B L2
ENSG00000135540 NHSL1 717227 sc-eQTL 2.40e-01 0.0967 0.0821 0.459 cMono_IL1B L2
ENSG00000135597 REPS1 421537 sc-eQTL 9.30e-01 0.00643 0.0736 0.459 cMono_IL1B L2
ENSG00000146386 ABRACL 381053 sc-eQTL 1.13e-01 -0.098 0.0615 0.459 cMono_IL1B L2
ENSG00000164442 CITED2 35150 sc-eQTL 4.32e-01 0.0509 0.0646 0.459 cMono_IL1B L2
ENSG00000225177 AL590617.2 717250 sc-eQTL 6.59e-01 -0.0381 0.0862 0.459 cMono_IL1B L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 4.69e-01 -0.0571 0.0787 0.459 cMono_S100A L2
ENSG00000112406 HECA 274718 sc-eQTL 9.28e-02 0.112 0.0662 0.459 cMono_S100A L2
ENSG00000135540 NHSL1 717227 sc-eQTL 2.05e-01 -0.107 0.0841 0.459 cMono_S100A L2
ENSG00000135597 REPS1 421537 sc-eQTL 6.21e-01 0.0395 0.0799 0.459 cMono_S100A L2
ENSG00000146386 ABRACL 381053 sc-eQTL 4.22e-01 -0.0558 0.0694 0.459 cMono_S100A L2
ENSG00000164442 CITED2 35150 sc-eQTL 6.93e-01 0.0272 0.0687 0.459 cMono_S100A L2
ENSG00000225177 AL590617.2 717250 sc-eQTL 9.15e-01 -0.00986 0.0925 0.459 cMono_S100A L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 2.07e-01 0.135 0.107 0.461 gdT L2
ENSG00000112406 HECA 274718 sc-eQTL 3.73e-01 0.0907 0.102 0.461 gdT L2
ENSG00000135597 REPS1 421537 sc-eQTL 7.46e-01 -0.0342 0.105 0.461 gdT L2
ENSG00000146386 ABRACL 381053 sc-eQTL 7.98e-01 -0.0203 0.0793 0.461 gdT L2
ENSG00000164442 CITED2 35150 sc-eQTL 7.22e-01 0.0325 0.0914 0.461 gdT L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 5.49e-01 -0.0549 0.0915 0.458 intMono L2
ENSG00000112406 HECA 274718 sc-eQTL 9.40e-01 0.00567 0.0752 0.458 intMono L2
ENSG00000135540 NHSL1 717227 sc-eQTL 2.80e-01 -0.0896 0.0827 0.458 intMono L2
ENSG00000135597 REPS1 421537 sc-eQTL 6.18e-01 0.0427 0.0856 0.458 intMono L2
ENSG00000146386 ABRACL 381053 sc-eQTL 4.16e-01 -0.0636 0.0781 0.458 intMono L2
ENSG00000164442 CITED2 35150 sc-eQTL 1.01e-01 0.124 0.0754 0.458 intMono L2
ENSG00000225177 AL590617.2 717250 sc-eQTL 6.90e-02 -0.169 0.0923 0.458 intMono L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 5.39e-01 -0.0533 0.0866 0.459 ncMono L2
ENSG00000112406 HECA 274718 sc-eQTL 6.50e-01 0.0359 0.0792 0.459 ncMono L2
ENSG00000135540 NHSL1 717227 sc-eQTL 8.58e-01 0.0149 0.0833 0.459 ncMono L2
ENSG00000135597 REPS1 421537 sc-eQTL 5.00e-01 0.0424 0.0627 0.459 ncMono L2
ENSG00000146386 ABRACL 381053 sc-eQTL 9.97e-01 0.000253 0.0756 0.459 ncMono L2
ENSG00000164442 CITED2 35150 sc-eQTL 7.40e-01 0.0213 0.0641 0.459 ncMono L2
ENSG00000225177 AL590617.2 717250 sc-eQTL 7.95e-01 0.024 0.0925 0.459 ncMono L2
ENSG00000024862 CCDC28A 636289 sc-eQTL 1.78e-01 -0.138 0.102 0.466 pDC L2
ENSG00000112406 HECA 274718 sc-eQTL 8.27e-01 -0.019 0.0869 0.466 pDC L2
ENSG00000135540 NHSL1 717227 sc-eQTL 4.06e-02 -0.162 0.0784 0.466 pDC L2
ENSG00000135597 REPS1 421537 sc-eQTL 1.94e-01 0.104 0.08 0.466 pDC L2
ENSG00000146386 ABRACL 381053 sc-eQTL 1.00e-01 -0.144 0.0872 0.466 pDC L2
ENSG00000164442 CITED2 35150 sc-eQTL 7.03e-01 0.0395 0.103 0.466 pDC L2
ENSG00000225177 AL590617.2 717250 sc-eQTL 4.94e-01 -0.0546 0.0797 0.466 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A 636289 sc-eQTL 4.99e-01 0.0572 0.0845 0.459 B_Memory LOneK1K
ENSG00000112406 HECA 274718 sc-eQTL 1.20e-02 0.188 0.0742 0.459 B_Memory LOneK1K
ENSG00000135597 REPS1 421537 sc-eQTL 3.97e-01 0.0661 0.0779 0.459 B_Memory LOneK1K
ENSG00000146386 ABRACL 381053 sc-eQTL 5.89e-01 -0.0293 0.054 0.459 B_Memory LOneK1K
ENSG00000164440 TXLNB 117800 sc-eQTL 2.79e-01 0.097 0.0893 0.459 B_Memory LOneK1K
ENSG00000164442 CITED2 35150 sc-eQTL 2.21e-01 -0.0928 0.0757 0.459 B_Memory LOneK1K
ENSG00000226571 AL592429.2 138436 sc-eQTL 8.31e-01 0.0189 0.0883 0.459 B_Memory LOneK1K
ENSG00000024862 CCDC28A 636289 sc-eQTL 1.30e-01 0.12 0.0791 0.459 B_Naive LOneK1K
ENSG00000112406 HECA 274718 sc-eQTL 2.79e-01 0.0806 0.0742 0.459 B_Naive LOneK1K
ENSG00000135597 REPS1 421537 sc-eQTL 5.30e-01 0.0399 0.0634 0.459 B_Naive LOneK1K
ENSG00000146386 ABRACL 381053 sc-eQTL 8.19e-01 0.0102 0.0445 0.459 B_Naive LOneK1K
ENSG00000164440 TXLNB 117800 sc-eQTL 7.23e-01 0.0331 0.0931 0.459 B_Naive LOneK1K
ENSG00000164442 CITED2 35150 sc-eQTL 7.99e-01 -0.0173 0.0677 0.459 B_Naive LOneK1K
ENSG00000226571 AL592429.2 138436 sc-eQTL 2.04e-01 -0.101 0.0792 0.459 B_Naive LOneK1K
ENSG00000024862 CCDC28A 636289 sc-eQTL 4.64e-01 -0.0464 0.0633 0.459 CD14_Mono LOneK1K
ENSG00000112406 HECA 274718 sc-eQTL 2.09e-01 0.0714 0.0566 0.459 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 717227 sc-eQTL 6.66e-01 0.0359 0.083 0.459 CD14_Mono LOneK1K
ENSG00000135597 REPS1 421537 sc-eQTL 7.63e-01 0.0206 0.0683 0.459 CD14_Mono LOneK1K
ENSG00000146386 ABRACL 381053 sc-eQTL 1.61e-01 -0.0852 0.0605 0.459 CD14_Mono LOneK1K
ENSG00000164442 CITED2 35150 sc-eQTL 4.70e-01 0.0481 0.0665 0.459 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 717250 sc-eQTL 5.78e-01 -0.0496 0.0891 0.459 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A 636289 sc-eQTL 4.04e-01 -0.0715 0.0856 0.461 CD16_Mono LOneK1K
ENSG00000112406 HECA 274718 sc-eQTL 8.57e-01 0.0132 0.0732 0.461 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 717227 sc-eQTL 9.82e-01 0.00182 0.0814 0.461 CD16_Mono LOneK1K
ENSG00000135597 REPS1 421537 sc-eQTL 6.42e-01 0.0236 0.0506 0.461 CD16_Mono LOneK1K
ENSG00000146386 ABRACL 381053 sc-eQTL 4.07e-01 -0.0615 0.074 0.461 CD16_Mono LOneK1K
ENSG00000164442 CITED2 35150 sc-eQTL 3.91e-01 0.0549 0.0638 0.461 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 717250 sc-eQTL 2.35e-01 -0.107 0.0897 0.461 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A 636289 sc-eQTL 1.05e-01 0.134 0.082 0.459 NK_CD56dim LOneK1K
ENSG00000112406 HECA 274718 sc-eQTL 1.51e-01 0.101 0.07 0.459 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 421537 sc-eQTL 4.82e-01 -0.0484 0.0687 0.459 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL 381053 sc-eQTL 7.20e-01 -0.0159 0.0443 0.459 NK_CD56dim LOneK1K
ENSG00000164442 CITED2 35150 sc-eQTL 6.98e-01 0.0249 0.0641 0.459 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000226571 AL592429.2 138436 eQTL 2.77e-03 0.106 0.0354 0.00392 0.00125 0.456

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000164442 \N 35150 1.48e-05 1.92e-05 2.46e-06 9.47e-06 2.45e-06 6.44e-06 2.18e-05 2.48e-06 1.53e-05 6.72e-06 1.92e-05 7.7e-06 2.66e-05 6.34e-06 4.6e-06 9.17e-06 8.09e-06 1.22e-05 4.09e-06 3.59e-06 7e-06 1.47e-05 1.63e-05 4.6e-06 2.61e-05 5.01e-06 7.68e-06 6.29e-06 1.66e-05 1.42e-05 1.03e-05 9.57e-07 1.4e-06 3.91e-06 6.33e-06 3.37e-06 1.77e-06 2.35e-06 2.65e-06 1.3e-06 1.05e-06 1.99e-05 2.35e-06 1.96e-07 1.04e-06 2.36e-06 1.99e-06 7.24e-07 4.73e-07